8000 [MERGE] Merge changes from sklearn main by adam2392 · Pull Request #52 · neurodata/scikit-learn · GitHub
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Merged
merged 71 commits into from
Aug 11, 2023
Merged

[MERGE] Merge changes from sklearn main #52

merged 71 commits into from
Aug 11, 2023

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mchikyt3 and others added 30 commits July 20, 2023 15:43
@mchikyt3
FIX Correct the initiatialization of precisions_cholesky_ from `pre…
7de59b2 
…cisions_init` (scikit-learn#26416)
@StefanieSenger @glemaitre
DOC Added information about space complexity to docs DBSCAN (scikit-l…
889b829 
…earn#26783)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
@lucyleeow
DOC Directly import label class in example (scikit-learn#26876)
b13f69c
@rprkh
DOC update description of support_vectors_ (scikit-learn#26866)
399131c
@DimitriPapadopoulos @ArturoAmorQ
DOC fix broken links (scikit-learn#26853)
c135445 
Co-authored-by: Arturo Amor <86408019+ArturoAmorQ@users.noreply.github.com>
@Micky774
PERF Pass buffers via pointers in PairwiseDistancesReductions routi…
0486033 
…nes for sparse data (scikit-learn#26765)
@Charlie-XIAO
FIX ravel prediction of PLSRegression when fitted on 1d y (scikit…
75f3e47 
…-learn#26602)
@greyisbetter
DOC Add docstring DistanceMetric class (scikit-learn#26795)
ca51d77
@lesteve
CI Add summary about failures and errors in most builds (scikit-learn…
d66a384 
…#26847)
@glemaitre
MAINT make sure to test encoders in common tests (scikit-learn#26859)
d991a19
@mlondschien
DOC Specify primal/dual formulation in LogisticRegression (scikit-lea…
507095b 
…rn#26294)
@adrinjalali
MNT SLEP6 move common metadata routing test objects (scikit-learn#26894)
07f6586
@Micky774
FIX Update pairwise distance function argument names (scikit-learn#26351
59048f9 
)
@Shreesha3112 @jeremiedbb @Micky774
FIX Allow 0<p<1 for Minkowski metric regardless of X's dtype (scikit-…
44d4cd4 
…learn#26760)

Co-authored-by: Jérémie du Boisberranger <34657725+jeremiedbb@users.noreply.github.com>
Co-authored-by: Meekail Zain <34613774+Micky774@users.noreply.github.com>
@noashin
DOC use the same estimators to demonstrate pipeline construction (sci…
c2f5782 
…kit-learn#26907)
@rprkh @ArturoAmorQ
DOC example on feature selection using negative tol values (scikit-…
b6dd04e 
…learn#26205)

Co-authored-by: Arturo Amor <86408019+ArturoAmorQ@users.noreply.github.com>
@Micky774
MNT Improve robustness of sparse test in HDBSCAN (scikit-learn#26889)
e54f678
@Micky774
MNT Fixed linting error in plot_select_from_model_diabetes.py (scik…
9e09e4d 
…it-learn#26915)
@lucyleeow
DOC Improve plot_target_encoder_cross_val.py example (scikit-learn#…
8f63882 
…26677)
@2maz @thomasjpfan
FIX fix validation of class_names argument for plot_tree (scikit-lear…
b8d4f46 
…n#26903)

Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@thomasjpfan @betatim @jjerphan
ENH Adds support for missing values in Random Forest (scikit-learn#26391
4094851 
)

Co-authored-by: Tim Head <betatim@gmail.com>
Co-authored-by: Julien Jerphanion <git@jjerphan.xyz>
@adrinjalali @thomasjpfan
MNT (SLEP6) remove other_params from provess_routing (scikit-learn#26909
36c5073 
)

Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@lpsilvestrin @adrinjalali
MAINT Parameters validation for sklearn.cluster.dbscan (scikit-learn#…
699690f 
…26920)

Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
@marekhanus @adrinjalali
DOC Add missing cross validation image alt (scikit-learn#26261)
1090121 
Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
@fabianegli @thomasjpfan
DOC Note missing value support as advantage of decision trees (scikit…
2b0eef8 
…-learn#26928)

Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@LukasFolwarczny
DOC backticks around X and y in linear_model.rst (scikit-learn#26929)
dc9d0eb
@lorentzenchr
DOC update related packages (scikit-learn#26922)
fa87f28
@thomasjpfan @adrinjalali @OmarManzoor
FIX Disable set_output for label encoders (scikit-learn#26940)
3dea102 
Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
Co-authored-by: Omar Salman <omar.salman@arbisoft.com>
@thomasjpfan
FIX Adds more informative error message for OHE (scikit-learn#26931)
dcf0510
@Tialo
DOC Fixed typo, added missing comma in plot_forest_hist_grad_boosting…
405a5a0 
…_comparison example (scikit-learn#26954)
jonnor and others added 25 commits August 2, 2023 15:43
@jonnor @Micky774
DOC Add 2 related projects for microcontroller export (scikit-learn#2…
9c96671 
…6984)

Co-authored-by: Meekail Zain <34613774+Micky774@users.noreply.github.com>
@adrinjalali
FIX (SLEP6) make Pipeline work with an estimator implementing __len__ (…
594475a 
…scikit-learn#26964)
@glemaitre @adrinjalali @ArturoAmorQ
DOC improve the KNN classifier example (scikit-learn#26993)
38a06e4 
Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
Co-authored-by: Arturo Amor <86408019+ArturoAmorQ@users.noreply.github.com>
@hiramatsuyuusuke
DOC Fix miniforge link with typo in install.rst (scikit-learn#27019)
5f8d89e
@maresb @lesteve
MNT Fix good Conda versions for updating lockfile (scikit-learn#26908)
aa36aac 
Co-authored-by: Loïc Estève <loic.esteve@ymail.com>
@StefanieSenger @glemaitre
FIX param_distribution param of HalvingRandomSearchCV accepts lis…
3725ac1 
…t of dicts (scikit-learn#26893)

Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
@Micky774
MNT Exported WeightingStrategy for *_classmode reductions (scikit…
392c084 
…-learn#27030)
@thomasjpfan @jjerphan
CI Only run arm tests nightly (scikit-learn#26996)
05133a5 
Co-authored-by: Julien Jerphanion <git@jjerphan.xyz>
@mtsokol
ENH: Update numpy exceptions imports (scikit-learn#27013)
62b9e4a
@xuefeng-xu @thomasjpfan
FIX missing_indices were calculated twice in OrdinalEncoder (scikit-l…
34c4741 
…earn#27017)

Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@lorentzenchr
MAINT DOC HGBT leave updated if loss is not smooth (scikit-learn#26254)
ed01199
@xuefeng-xu
FIX user keyword missing in v1.4 change log (scikit-learn#27036)
e04b8e7
@Shreesha3112
FIX KNNImputer missing indicator column addition when add_indicator=T…
687465f 
…rue (scikit-learn#26600)

Co-authored-by: shreesha3112 <shreesha3112.com>
@lucyleeow
CLN Update var name in TargetEncoder to make consistent (scikit-lea…
5ecfa8d 
…rn#27033)
@9Y5
ENH Add themes for HTML display. Add dark theme (scikit-learn#26862)
7d2da31
@adrinjalali @glemaitre
ENH add metadata routing to cross_val* (scikit-learn#26896)
6fa514a 
Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
@adrinjalali
MNT fix ruff type vs isinstance errors (scikit-learn#27039)
8e867b3
@thomasjpfan
MNT Use assert_no_warnings from numpy.testing (scikit-learn#27031)
fcaf0ff
@ArturoAmorQ @thomasjpfan
FIX potentially redundant marker argument (scikit-learn#27043)
438b919 
Co-authored-by: ArturoAmorQ <arturo.amor-quiroz@polytechnique.edu>
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@betatim @thomasjpfan
Add tests for train_test_split with Array API input (scikit-learn#26855)
1b0a51b 
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
@thomasjpfan
FIX Fixes set_output with list input (scikit-learn#27044)
e4efd8b
@StefanieSenger
DOC Highlight differerence between SVC/R and LinearSVC/R (scikit-lear…
94a0b4c 
…n#26825)
@jiawei-zhang-a
ENH Gaussian mixture bypassing unnecessary initialization computing (s…
1a78993 
…cikit-learn#26021)
@Micky774 @jjerphan
ENH Introduce dtype preservation semantics in DistanceMetric object…
acf60de 
…s. (scikit-learn#27006)

Co-authored-by: Julien Jerphanion <git@jjerphan.xyz>
@adam2392
Add missing value support for random forests
1e7a069 
Signed-off-by: Adam Li <adam2392@gmail.com>
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@adam2392 adam2392 mentioned this pull request Aug 11, 2023
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@adam2392 adam2392 merged commit 6ec023b into submodulev2 Aug 11, 2023
@adam2392 adam2392 deleted the mergemain branch August 11, 2023 14:33
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