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ES2543222T3 - Aptámero para NGF y uso del mismo - Google Patents

Aptámero para NGF y uso del mismo Download PDF

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Publication number
ES2543222T3
ES2543222T3 ES09816140.9T ES09816140T ES2543222T3 ES 2543222 T3 ES2543222 T3 ES 2543222T3 ES 09816140 T ES09816140 T ES 09816140T ES 2543222 T3 ES2543222 T3 ES 2543222T3
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seq
ngf
aptamer
binding
trka
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Inventor
Ling Jin
Shin Miyakawa
Masatoshi Fujiwara
Yoshikazu Nakamura
Hisanao Hiramatsu
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Fujimoto Pharmaceutical Corp
Ribomic Inc
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Fujimoto Pharmaceutical Corp
Ribomic Inc
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/115Aptamers, i.e. nucleic acids binding a target molecule specifically and with high affinity without hybridising therewith ; Nucleic acids binding to non-nucleic acids, e.g. aptamers
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7088Compounds having three or more nucleosides or nucleotides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P11/00Drugs for disorders of the respiratory system
    • A61P11/06Antiasthmatics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/04Centrally acting analgesics, e.g. opioids
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P29/00Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • C07K1/14Extraction; Separation; Purification
    • C07K1/16Extraction; Separation; Purification by chromatography
    • C07K1/22Affinity chromatography or related techniques based upon selective absorption processes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • C12N2310/16Aptamers

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  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medicinal Chemistry (AREA)
  • General Engineering & Computer Science (AREA)
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  • Biotechnology (AREA)
  • Biochemistry (AREA)
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  • Pharmacology & Pharmacy (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • General Chemical & Material Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Physics & Mathematics (AREA)
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  • Pulmonology (AREA)
  • Pain & Pain Management (AREA)
  • Neurology (AREA)
  • Neurosurgery (AREA)
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  • Epidemiology (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)

Abstract

Un aptámero que se une a NGF e inhibe la unión de NGF a un receptor de NGF, que comprende una secuencia UGAAAAAAACC (SEQ ID NO: 91), UGAAAGAAACC (SEQ ID NO: 92), UGAAAGAAACU (SEQ ID NO: 93), UGAAACAAACC (SEQ ID NO: 94), UGAAAAGAACC (SEQ ID NO: 95), UGAAAAAACCC (SEQ ID NO: 96), UGAAAAAACCU (SEQ ID NO: 97), UGAAAACAACC (SEQ ID NO: 98), UGAAAUAAACC (SEQ ID NO: 99), UGAAAUAAACU (SEQ ID NO: 100), UGAAAAAAUCU (SEQ ID NO: 101), AGAAUGAAACU (SEQ ID NO: 102), CGAACAAAACU (SEQ ID NO: 103), CGAAAGAAACU (SEQ ID NO: 104), UGAAAGGAACC (SEQ ID NO: 105), UGAAAAAAACY (SEQ ID NO: 110), UGAAAGAAACY (SEQ ID NO: 111), CGAACAAAACY (SEQ ID NO: 112), o CGAAAGAAACY (SEQ ID NO: 113); en donde Y es un nucleótido de pirimidina, y al menos un nucleótido está modificado.

Description

imagen1
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imagen7
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imagen9
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imagen11
imagen12
imagen13
imagen14
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imagen16
imagen17
imagen18
imagen19
imagen20
E09816140
09-07-2015
SEQ ID NO: 59:
imagen21
SEQ ID NO: 60:
imagen22
SEQ ID NO: 61:
imagen23
SEQ ID NO: 62:
imagen24
SEQ ID NO: 63:
imagen25
SEQ ID NO: 64:
imagen26
SEQ ID NO: 65:
imagen27
15 SEQ ID NO: 66:
imagen28
22
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imagen30
imagen31
imagen32
E09816140
09-07-2015
la cantidad de unión de NGF y receptor de NGF añadido con un aptámero como un valor de corrección. Aquí, la cantidad de unión es el valor de UR en la parte superior del pico del sensograma de BIAcore (valor de UR inmediatamente después de completarse la inyección de NGF). El valor de corrección se restó de 100 para dar un % de actividad inhibidora, donde no menos de 60% muestra la presencia de actividad inhibidora. Como resultado del 5 experimento, se encontró que todos los aptámeros mostrados por los SEQ ID NO: 1 -9, 12, 37 -55, 57 -87 inhibían la unión de NGF y TrkA (Tabla 1). Como ejemplo, la inhibición de la unión de NGF y TrkA por el aptámero mostrado por el SEQ ID NO: 6 se muestra en la Fig. 12. Se realizó un experimento similar para otro receptor P75 (p75-Fc; R&D Systems). Como resultado, se encontró que todos los aptámeros mostrados por los SEQ ID NO: 1 -9, 12, 37 55, 57 -87 inhibían la unión de NGF y P75 no menos de 60% (Tabla 1). Como ejemplo, la inhibición de la unión de
10 NGF y P75 por el aptámero mostrado por el SEQ ID NO: 6 se muestra en la Fig. 13.
Tabla 1
imagen33
imagen34 Experimento de inhibición por BIACore
imagen35
Longitud TrKA P75
SEQ ID NO: 1
79 + +
SEQ ID NO: 2
78 + +
SEQ ID NO: 3
79 + +
SEQ ID NO: 4
79 + +
SEQ ID NO: 5
79 + +
SEQ ID NO: 6
79 + +
SEQ ID NO: 7
79 + +
SEQ ID NO: 8
78 + +
SEQ ID NO: 9
79 + +
SEQ ID NO: 12
79 + +
SEQ ID NO: 24
69 + +
SEQ ID NO: 25
47 + +
SEQ ID NO: 26
46 + +
SEQ ID NO: 27
45 + +
SEQ ID NO: 28
40 + +
SEQ ID NO: 29
61 + +
SEQ ID NO: 30
41 + +
SEQ ID NO: 31
34 + +
SEQ ID NO: 32
38 + +
SEQ ID NO: 33
36 + +
SEQ ID NO: 34
34 + +
SEQ ID NO: 35
38 + +
SEQ ID NO: 36
35 + +
SEQ ID NO: 37
74 + +
SEQ ID NO: 38
74 + +
27
E09816140
09-07-2015
imagen36
imagen37 Experimento de inhibición por BIACore
imagen38
Longitud TrKA P75
SEQ ID NO: 39
74 + +
SEQ ID NO: 40
74 + +
SEQ ID NO: 41
74 + +
SEQ ID NO: 42
74 + +
SEQ ID NO: 43
73 + +
SEQ ID NO: 44
73 + +
SEQ ID NO: 45
74 + +
SEQ ID NO: 46
74 + +
SEQ ID NO: 47
74 + +
SEQ ID NO: 48
74 + +
SEQ ID NO: 49
74 + +
SEQ ID NO: 50
74 + +
SEQ ID NO: 51
77 + +
SEQ ID NO: 52
73 + +
SEQ ID NO: 53
74 + +
SEQ ID NO: 54
74 + +
SEQ ID NO: 55
72 + +
SEQ ID NO: 57
75 + +
SEQ ID NO: 58
74 + +
SEQ ID NO: 59
74 + +
SEQ ID NO: 60
74 + +
SEQ ID NO: 61
74 + +
SEQ ID NO: 62
74 + +
SEQ ID NO: 63
74 + +
SEQ ID NO: 64
74 + +
SEQ ID NO: 65
74 + +
SEQ ID NO: 66
74 + +
SEQ ID NO: 67
74 + +
SEQ ID NO: 68
74 + +
SEQ ID NO: 69
83 + +
SEQ ID NO: 70
82 + +
28
E09816140
09-07-2015
imagen39
imagen40 Experimento de inhibición por BIACore
imagen41
Longitud TrKA P75
SEQ ID NO: 71
82 + +
SEQ ID NO: 72
82 + +
SEQ ID NO: 73
81 + +
SEQ ID NO: 74
82 + +
SEQ ID NO: 75
78 + +
SEQ ID NO: 76
78 + +
SEQ ID NO: 77
78 + +
SEQ ID NO: 78
78 + +
SEQ ID NO: 79
78 + +
SEQ ID NO: 80
78 + +
SEQ ID NO: 81
78 + +
SEQ ID NO: 82
78 + +
SEQ ID NO: 83
79 + +
SEQ ID NO: 84
78 + +
SEQ ID NO: 85
78 + +
SEQ ID NO: 86
78 + +
SEQ ID NO: 87
71 + +
SEQ ID NO: 88
33 + +
SEQ ID NO: 89
34 + +
SEQ ID NO: 90
32 + +
La Tabla 1 muestra aptámeros que inhiben la unión de TrkA o p75 y NGF. "+" muestra una actividad inhibidora (%) de no menos de 60%, y "-" muestra una de menos de 60%.
En cuanto al aptámero mostrado por el SEQ ID NO: 87, se realizó un experimento inhibidor similar al mencionado
5 anteriormente en unas condiciones de razón molar de NGF-aptámero de 1:1 (0,1 µM). Se utilizó la misma mezcla disolvente preparada de NGF y aptámero para los experimentos de TrkA y P75, y el experimento se realizó sin la influencia de variaciones en la preparación de la muestra. Como resultado, el aptámero mostrado por el SEQ ID NO: 87 inhibió la unión de NGF y TrkA en 93%, pero inhibió la unión de NGF y p75 solamente en 29%.
Ejemplo 7: Evaluación de la actividad fisiológica del aptámero utilizando células PC-12
10 Se evaluó la actividad fisiológica del aptámero por medio de un experimento supresor del crecimiento de neuritas utilizando células PC-12. Las células PC-12, que son una línea celular derivada de feocromocitoma de glándula suprarrenal de rata, son un modelo de célula del sistema nervioso, prolongan la neuritas por estimulación con NGF, y se diferencian como células nerviosas. Se evaluó si el aptámero inhibe o no el crecimiento de las neuritas. Las células PC-12 se sembraron sobre una placa de fondo plano de 96 pocillos recubierta con colágeno, y se añadió una
15 mezcla disolvente de NGF (concentración final 25 ng/mL o 1,9 nM) que se había hecho reaccionar previamente durante1 hr a 37°C y un aptámero (concentración final 500 nM) para iniciar el cultivo celular. Después de eso, se añadió la misma cantidad de aptámero dos veces cada 24 horas y se observó el nivel de crecimiento de las neuritas y se evaluó el día 3 con un microscopio. Para la evaluación, se utilizaron puntuaciones de 0 -3, donde la puntuación 0 representa sin crecimiento de las neuritas, la puntuación 1 representa un ligero crecimiento de las neuritas, la
29
imagen42
imagen43
E09816140
09-07-2015
Tabla 3
imagen44
100 nM 10 nM CI50 (nM)
SEQ ID NO: 5
96,5 0,0 21,0
SEQ ID NO: 6
98,6 20,1 17,7
SEQ ID NO: 12
92,8 0,0 43,4
SEQ ID NO: 30
81,9 29,2 57,6
SEQ ID NO: 30(5)
93,7 N.D. <100
SEQ ID NO: 30(6)
98,2 16,2 58,9
SEQ ID NO: 32
64,0 0,0 84,7
SEQ ID NO: 35
57,0 0,0 91,5
SEQ ID NO: 35(1)
54,1 0,0 94,7
SEQ ID NO: 35(5)
70,3 0,0 79,8
SEQ ID NO: 35(6)
80,4 0,0 73,5
SEQ ID NO: 37
98,9 96,0 6,6
SEQ ID NO: 38
98,1 82,2 7,3
SEQ ID NO: 39
99,0 98,8 6,3
SEQ ID NO: 40
99,6 100,0 2,4
SEQ ID NO: 42
96,1 98,3 6,6
SEQ ID NO: 43
97,3 67,4 <10
SEQ ID NO: 44
99,4 0,0 26,1
SEQ ID NO: 45
99,1 12,3 20,2
SEQ ID NO: 46
99,3 0,0 25,4
SEQ ID NO: 47
98,2 35,9 14,6
SEQ ID NO: 48
97,8 0,0 46,4
SEQ ID NO: 49
98,3 97,9 4,6
SEQ ID NO: 50
97,5 0,0 25,4
SEQ ID NO: 51
99,4 45,1 11,9
SEQ ID NO: 52
99,8 95,3 6,7
SEQ ID NO: 53
100,0 53,4 <10
SEQ ID NO: 54
94,4 76,0 7,6
SEQ ID NO: 55
96,2 0,0 49,9
SEQ ID NO: 56
92,8 19,2 18,8
SEQ ID NO: 57
94,1 96,8 6,4
32
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Claims (1)

  1. imagen1
    imagen2
ES09816140.9T 2008-09-24 2009-09-18 Aptámero para NGF y uso del mismo Active ES2543222T3 (es)

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JP2008244982 2008-09-24
JP2008244982 2008-09-24
PCT/JP2009/066457 WO2010035725A1 (ja) 2008-09-24 2009-09-18 Ngfに対するアプタマー及びその使用

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ES2543222T3 true ES2543222T3 (es) 2015-08-17

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US (1) US10260070B2 (es)
EP (1) EP2354225B1 (es)
JP (1) JP5602020B2 (es)
KR (1) KR101694559B1 (es)
CN (1) CN102171339B (es)
AU (1) AU2009297626B2 (es)
BR (1) BRPI0919268B8 (es)
CA (1) CA2738129C (es)
DK (1) DK2354225T3 (es)
ES (1) ES2543222T3 (es)
HU (1) HUE026595T2 (es)
IL (1) IL211929A0 (es)
MX (1) MX2011003144A (es)
RU (1) RU2011116175A (es)
WO (1) WO2010035725A1 (es)
ZA (1) ZA201102682B (es)

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US8975026B2 (en) 2007-01-16 2015-03-10 Somalogic, Inc. Method for generating aptamers with improved off-rates
CA2808233C (en) 2010-03-03 2017-07-11 Somalogic, Inc. Aptamers to 4-1bb and their use in treating diseases and disorders
CN102844436B (zh) * 2010-03-24 2015-11-25 力博美科股份有限公司 针对ngf的适配体及其用途
CN104069512A (zh) * 2010-04-12 2014-10-01 私募蛋白质体公司 针对β-NGF的适体及其在治疗β-NGF介导的疾病和失调中的用途
JP5696830B2 (ja) * 2010-04-27 2015-04-08 株式会社アップウェル Par−2活性化阻害物質
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KR101964954B1 (ko) 2010-08-31 2019-04-03 바이오뉴레 파르마, 에스.엘. 뉴로트로핀 수용체의 효현제 및 약제로서의 이의 용도
DK2762569T3 (en) * 2011-09-28 2018-08-27 Ribomic Inc NGF aptamer and its use.

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AU2009297626A2 (en) 2011-05-19
AU2009297626A1 (en) 2010-04-01
KR20110059888A (ko) 2011-06-07
WO2010035725A1 (ja) 2010-04-01
MX2011003144A (es) 2011-05-19
US10260070B2 (en) 2019-04-16
US20110251266A1 (en) 2011-10-13
DK2354225T3 (en) 2015-06-29
EP2354225A9 (en) 2012-06-27
BRPI0919268A2 (pt) 2017-11-07
IL211929A0 (en) 2011-06-30
BRPI0919268B8 (pt) 2021-05-25
ZA201102682B (en) 2012-06-27
JPWO2010035725A1 (ja) 2012-02-23
EP2354225A1 (en) 2011-08-10
BRPI0919268A8 (pt) 2018-02-06
JP5602020B2 (ja) 2014-10-08
EP2354225A4 (en) 2012-03-21
CA2738129C (en) 2017-11-14
EP2354225B1 (en) 2015-04-22
CN102171339B (zh) 2017-06-09
KR101694559B1 (ko) 2017-01-09
BRPI0919268B1 (pt) 2021-01-12
AU2009297626B2 (en) 2016-01-14
RU2011116175A (ru) 2012-10-27
HUE026595T2 (hu) 2016-06-28
CA2738129A1 (en) 2010-04-01
CN102171339A (zh) 2011-08-31

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