Science Gen Ed
Science Gen Ed
Science Gen Ed
BIOLOGY
- From Greek words “bios” and “logos”
- Literally means the “study of life”
- Aristotle – Father of Biology
Branches of Biology
In 1665 Robert Hooke used an early compound microscope to look at a non-living thin slice of a
cork, a plant material; termed them as cells, published in his book Micrograpia.
1674, Netherlands: Anton van Leeuwenhoek used a single-lens microscope to observe pond water
and other things; termed them animalcules.
Robert Brown discovered the cell nucleus in 1831.
Felix Dujardin termed the living substance within the cell as sarcode in 1835.
Later in 1839, Jan Evangelista Purkinje called sarcode protoplasm (cytoplasm).
In the 1830’s Matthias Schleiden, a German lawyer turned botanist, concluded that despite the
differences, plants are made up of cells and that the plant embryo arises from a single cell.
In 1839 Theodor Schwann, a German zoologist and a colleague of Schleiden, published a
comprehensive report on the cellular basis of animal life.
In 1855 Rudolf Virchow, a German pathologist, proposed that cells can arise only by division of
the pre-existing cell, and coined the cell cycle/ cell division.
Microscope – a tool that produces an enlarged image of something very small; it is thought to be the
scientist’s “magic tool”.
Types of Microscope
1. Light Microscope (good for living cell) – one that uses a light beam; highest known magnification is
2000x.
i. Simple microscope have one lens.
ii. Compound Microscope have 2 or more lens.
2. Electron Microscope (good for preserved cell or non-living cell) – one that uses electron beam; up to 10,
000, 000x magnification.
i. Scanning Electron Microscope (SEM) – more on the surface scan.
ii. Transmission Electron Microscope (TEM) – more on inner structure.
iii. Scanning-Tunneling Electron Microscope (STEM) – a hybrid of the above EM’s.
What is a cell?
Smallest unit of a living thing.
Basic building blocks of organisms.
Smallest unit of life.
1. Prokaryotic Cells – cells that do not contain a nucleus, do not have membrane-bound organelles, small
in size. They have their DNA in a region called Nucleoid. Examples are bacteria and archaea (Unicellular).
2. Eukaryotic Cells – cells that contain a true nucleus, and have membrane-bound organelles, mostly
larger than prokaryotes. Examples are plants, animals, fungi, and protists (Unicellular, Multicellular).
Cellular Parts
3. The Cytoplasm
- region between the nuclear membrane and cell membrane
- jelly like fluid (Cytosol)
- where most of life processes occur
- where organelles (little organs) are located
- compose of water, salts, proteins, fats, carbohydrates, and other chemicals
11. Vacuoles
- are found in plants (central vacuole)
- hold reserves of important organic compounds and water
- can take up to 30% - 90% of plant cell’s volume
- also found in animal cells (food vacuole)
12. Cytoskeleton: Mechanical support, network of fibers
- Microfilament (Actin)
- Intermediate filament (Keratin)
- Microtubules (Tubulin)
- Microfilaments (Actin Filaments) are the thinnest part of the cytoskeleton, and are used to give
shape to the cell and support all of its internal parts. They are essential for cytokinesis, amoeboid
movement, and changes in cell shape.
13. Cilium
- hair-like structure
ex. cilia in paramecium, fallopian tube (oviduct), lungs
14. Flagellum
- whip-like structure
ex. flagellum in sperm cell, euglena, bacteria
15. Vesicles
- Carry materials in the inside and to the outside of the cell
Transport vesicles – move materials within the cell
Secretory vesicles – move materials outside of the cell, through a process called exocytosis
Plant Cell – no centrioles, no cilia, no lysosome, has cell wall, has central vacuole, and has chloroplasts
Animal Cell – has centrioles, has cilia, has lysosome, no cell wall, no central vacuole, and no chloroplasts
Cellular Transport
a. Passive Transport
- a diffusion of a substance across a membrane with no energy investment
- carbon dioxide, water, and oxygen easily diffuse across plasma membrane
- moves from high to low concentration (concentration gradient)
- can be diffusion, facilitated diffusion, or osmosis
1. Diffusion
- the tendency of molecules of any substance to spread out evenly into the available space
2. Facilitated Diffusion
- it is a type of passive transport aided by transport (channel) proteins.
- Transport proteins speed up the movement of molecules across the plasma membrane
3. Osmosis
- is the movement of water across a semipermeable membrane
- affected by the concentration gradient of dissolved substances called the solution’s tonicity
- diffusion of water
Solution’s Tonicity
1. Isotonic solution
- the concentration of solutes (outside of the cell) is the same as it is inside the cell.
- there will be no net movement of water
2. Hypertonic Solution
- the concentration of solutes outside the cell is greater than inside the cell
- water will go out of the cell
- the cell will lose water ( mo hiyos)
- Clue: plasmolysis, shrivel, shrink, dehydrated
3. Hypotonic Solution
- the concentration of solutes outside the cell is less than (lower) inside the cell.
- water will come inside the cell
- the cell will gain much water (swell/mo hubag) and may burst, lyse or become turgid plants.
b. Active Transport
- use energy to move solutes against their concentration gradient
- requires energy, usually in the form of ATP
- Examples: Ion pumps, cotransport, bulk transport (endocytosis, exocytosis)
Bulk Transport
1. Exocytosis
- secretory vesicles migrate to the plasma membrane, fuse with it, and release their content.
- is the release of the cellular substances contained in secretory vesicles to the exterior (outside of the
cell).
2. Endocytosis
- the cell takes in macromolecules by forming new vesicles from the plasma membrane.
- It can be:
Pinocytosis – (big materials) solid particle
Phagocytosis – (small materials) extracellular fluid
Receptor-mediated – attachment site of the cell membrane such as signal cells
TAXONOMY
- The study of classification and naming of organisms
- Carolus Linnaeus (Father of Modern Taxonomy)
- Proposed the binomial nomenclature (two name system)
Domain Dear
Kingdom King
Phylum/Division Philpp
Class Come
Order Over
Family For
Genus Good
Species Spaghetti
a. Domain Archaea
1. Kingdom Archaebacteria
- organisms that belong to this kingdom are all microscopic
- they live in various places, some even in the most severe environments
- ex. Methanogens, Halophiles, and Thermophiles
b. Domain Bacteria
1. Kingdom Protista
- protist differ in size, movement and method of obtaining energy
- most protist are microscopic, some can grow to as high as several meters
- Protozoans, diatoms, various types of algae (green, brown, golden, red algae)
- ex. Entamoeba histolytica (Amoebiasis)
2. Kingdom Fungi
- all are heterotrophic
-- ex. fungi, molds, mushroom, yeast, mildews, microsporidia
3. Kingdom Animalia
- animals consist of two major groups, invertebrates and vertebrates.
- Invertebrates lack bone which is present in vertebrates
- all are heterotrophic
4. Kingdom Plantae
- they are multicellular and because they have chlorophyll, they can make their own food
- plants consists of two big groups: those which do not have tissues to transport water and food
(nonvascular) and those that have transport system (vascular)
a. Nonvascular Plants
- no vascular or conducting tissues
- found in moist places
- ex. mosses, liverworts, hornworts
b. Vascular Plants
- have vascular or conducting issues
ii. Gymnosperms
- cone bearing plants
- have naked seed
- seeds are not enclosed by fruit
- the four groups of living gymnosperms are conifers (pine tree), cycads, ginkgoes,
and gnetophytes
a. Female cone
Female cones grow in the upper branches where they may be fertilized by pollen blown on the wind
from the male cones.
Male cones grow in the lower branches.
b. Male cone
A pollen tube forms, allowing the pollen to migrate towards the female gametophyte. Upon
fertilization, a diploid zygote form.
Seeds are dispersed and grow into mature trees.
1. Runners
- also known as stolon
- horizontal stems
- new roots and shoots develop at the node
- ex. strawberry plant, Bermuda grass, bamboo grass
2. Tubers
- underground stems that store for the plant, the ‘eyes’ are the stem’s nodes, and each eye
contains a cluster of bud.
- ex. potato
3. Rhizomes
- resemble stolons because they grow as underground horizontal stems from plant to plant
- some rhizomes are compressed and fleshy.
- ex. ginger
4. Bulbs
- shortened, compressed, underground stems surrounded by fleshy scales (leave) that
envelop a central bud at the tip of the stem.
- ex. onion and garlic
5. Corms
- underground stem
- shaped liked bulbs
- do not contain fleshy scale
- solid, swollen stem with dry scale-like leaves
- ex. Taro (Colocasia)
6. Undeground Roots
- ex. carrots, sweet potatoes, yam, cassava, and turnip
EARTHWORM
- Hermaphroditic/ Monoecious
o Both male and female organs are found in the same worm
- Clitellum – contain eggs
o During copulation, one worm passes its sperm into the seminal vesicle of another, at the same
time receives sperm into his own receptacle.
FROG
- Non-amniotic eggs
- The eggs are fertilized in the water
o Amplexus – mating embrace of some amphibians
CHICKEN
- The rooster (male) places the opening of his reproductive organ against the opening of the hen’s
(female) reproductive organ
- The hen drops the fertilized egg (surrounded by yolk) out of her body and incubates it.
BUDDING
- The parent organism produces offspring by growing a replica in the form of an outgrowth called
‘bud’.
- Ex. Hydra, Sponges, Yeast
FRAGMENTATION/ REGENERATION
- Separated pieces of the parent organism can develop into an individual
- Ex. Sea star, flatworms
BINARY FISSION
- The individual divides into two halves
- Ex. Paramecium and bacteria
HUMAN SYSTEMS
1. DIGESTIVE SYSTEM
Types of Digestion
Ingestion (mouth)
Digestion (stomach)
Absorption (Small Intestine)
Elimination (Anus)
Peptic Ulcer (Digestive Disease) – ulcer is caused by helicobacter pylori
2. CIRCULATORY SYSTEM – transports blood from the heart to the lungs to oxygenate blood then to other
parts of the body.
3. RESPIRATORY SYSTEM – supplies body with oxygen, and release carbon dioxide as waste
5. REPRODUCTIVE SYSTEM
MALE: penis, testes, vas deferens, epididymis, scrotum, prostate glands, seminal vesicles, bulbourethral
gland
FEMALE: ovaries, oviduct, uterus, cervix, vagina, labia
6. NERVOUS SYSTEM
- regulates behavior, maintains homeostasis, controls sensory and motor functions
- memory and emotions
- spinal cord, brain
- Neurons – (Nerve cell) the basic unit of nervous system
Cerebrum
- Voluntary activities, largest part of the brain
- Responsible intelligences, learning, and judgment
Cerebellum
- Little brain, involuntary movement, balance, and coordination
Brainstem
- Connects brain and spinal cord, involuntary
- Life sustaining activities: breathing, heart rate, blood pressure, swallowing
- Includes the midbrain, pons, and medulla oblongata
7. SKELETAL SYSTEM
- protects and supports body parts
- framework of the body
- responsible for the blood production on bone marrows
- storage of calcium and phosphorous
- bones
o 206 bones in adults
o 300 bones in babies
Two Divisions of Skeletal System
1. Axial – central axis includes skull, vertebrae, and rib cage
2. Appendicular – arms and legs
8. MUSCULAR SYSTEM
- moves limbs and trunk
- moves substances through the body
Smooth Muscle – located in various internal structures including the digestive tract, uterus and blood
vessels such as arteries. (involuntary, non-striated)
Cardiac Muscle – the muscle specific to the heart. The heart contracts and relaxes without our
conscious awareness. (involuntary, striated)
Skeletal Muscle – the specialized tissue that is attached to bones and allows movement. (voluntary,
striated)
1. Livor Mortis
- known as Hypostasis
- the blood settles because of gravity
- skin becomes pinkish, bluish, blotchy
Note: the location of livor mortis can reveal the position of the body during the first 8 hours after death.
2. Rigor Mortis
- chemical changes because muscle mass to become rigid
- after Rigor Mortis, chemical breakdown and muscles become flaccid
3. Algor Mortis
- body cooling from normal internal temperature to the temperature of the environment
Phenotype
- Observable traits of an organism (green, tall, short, straight, kinky)
Genotype
- Genetic construction of an organism with reference to a specific character (Gg, GG, gg,
HH, hh, Hh)
- Homozygous
Gene combination having identical alleles for a single trait (HH, hh, TT, tt)
- Heterozygous
Gene combination having two different alleles (Hh, Tt)
Example:
S – straight hair (dominant)
s – kinky hair (recessive)
SS – straight hair
Ss – straight hair
ss- kinky hair
Homologous structures – are organs having similar structure but different function
o Ex. human arm, cat leg, seal flipper, bat wing
Analogous structures – are organs having similar functions but they have different structures and
different origin
o Ex. wings of birds, bats, and insects; fins of dolphins and sharks
Vestigial Structures – are organs that no longer seems to have a purpose in the current form.
o Ex. hindlimbs of the snake and whales
BIOTECHNOLOGY
- Modification of biological processes through human intervention
- Can be done through genetic engineering
Genetic Engineering
o The recipient becomes GMO (Genetically Modified Organism) or Transgenic Organism
o Ex. Bt Corn
- a variant of Maize that is genetically altered to express the bacterial Bt (Bacillus
thuringiensis) toxin which is poisonous to corn borer
Bioremediation
- The use of biotechnology to solve environmental problems
- Ex. oil eating bacteria – used in cleaning up oil spill
ECOLOGY – study of ecosystems
Ecosystem
- refers to the interaction of group of natural elements and the organisms in a given
environment
- relationship between the living things (biotic) and non-living things (abiotic)
Consumers
- Obtain food from producers
- Heterotrophs
i. Herbivores – organisms that graze directly on producers
ii. Carnivores – feed on other animals
iii. Omnivores – animals that feed on both plants and animals
iv. Scavengers – feed on decaying and necrotic matter (ex. vulture)
Decomposers/Saprophytes
- Breakdown dead organisms
- Ex. bacteria and fungi
NOTE: the producers is the first energy level or first trophic level. The primary consumer is the second
trophic level. The secondary consumer is the third energy level and so on.
Food chain
- Series of organisms feeding on the one preceding it.
Food Web
- Network of feeding interactions among species
- Feeding connection between all life forms
Energy Pyramid
- A graphical representation, showing the flow of energy at each trophic level in an ecosystem
- 10% rule
Biological Magnification
- Refers to the process where toxic substances move up the food chain and become more
concentrated at each level.
- These substances are often pollutants from industries or pesticides from farming.
Eutrophication
- Excessive richness of nutrients (phosphate and nitrate from fertilizers) in a lake or other
bodies of water
- Causes algal bloom
ECOLOGICAL RELATIONSHIPS
Competition
- The struggle between two organisms for the same resources within an environment.
Predation
- An ecological process in which an animal or an organism kills and feeds on another animal or
an organism.
- The animal that kills another animal to feed on is called a “predator”.
- The one that is killed to be eaten is know as ‘pray’.
Symbiosis
- A term describing any relationship or interaction between two dissimilar organisms. The
specific kind of symbiosis depends on whether either or both organisms benefit from the
relationship.
o Ammensalism
One species is hurt but the other does not benefit ( -, 0 )
No apparent coevolutionary relationship (one way process)
Example: as wild pigs forage, they often disturb the upper layer of soil and many
organisms may be taken from their burrows and exposed predation by the action
of the pigs, although the harm that the burrowers suffer does not improve the
pig’s situation at all.
EARTH SCIENCE
- the study of earth, its life supporting properties, materials, and geologic processes occurring in
its layers
1. Geology
- the study of the materials and processes that operate beneath and upon the Earth’s surface.
2. Oceanography
- the study of composition and movements of sea water, as well as coastal processes, seafloor
topography, and marine life.
3. Meteorology
- deals with the study of atmosphere and the elements that produce weather and climate
4. Astronomy
- the study the universe, our planet’s origin, and the members of the solar system
Origin of the Universe
1. Mercury
- 1 revolution: 88 earth days
- fastest revolving and orbiting planet
- closest planet to the sun
- very little atmosphere because of low gravity
- 315 degree Celsius (day time)
- -149 degrees Celsius (nigh time)
2. Venus
- the brightest planet in our solar system
- evening star (March April)
- morning star (September and October)
- twin planet of the Earth
- 1 revolution = 243 earth days
- hottest planet (up to 480 degrees Celsius)
- Earth’s closest neighboring planet
3. Earth
- blue planet
- 1 revolution = 365 days
- tilted axis 23.5 degrees
- located in the habitable zone
- the only planet with life
- its rapid rotation on its axis (equatorial bulge) makes the shape of the earth an oblate spheroid
- Moon is Earth’s natural satellite
4. Mars
- red planet
- 2 Earth years = 1 revolution
- 2moons: Phobos and Deimos
Asteroid Belt
- located between Mars and Jupiter
- failed to become a planet
- grain sized up to hundreds kilometers in diameter
- Ceres – largest asteroid (considered as dwarf planet by NASA)
- Hermes – closest asteroid to the Earth