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Zhengyu Liu

    Zhengyu Liu

    Understanding the past significant changes of the East Asia Summer Monsoon (EASM) and Winter Monsoon (EAWM) is critical for improving the projections of future climate over East Asia. One key issue that has remained outstanding from the... more
    Understanding the past significant changes of the East Asia Summer Monsoon (EASM) and Winter Monsoon (EAWM) is critical for improving the projections of future climate over East Asia. One key issue that has remained outstanding from the paleo-climatic records is whether the evolution of the EASM and EAWM are correlated. Here, using a set of long-term transient simulations of the climate evolution of the last 21,000 years, we show that the EASM and EAWM are positively correlated on the orbital timescale in response to the precessional forcing, but are anti-correlated on millennial timescales in response to North Atlantic melt water forcing. The relation between EASM and EAWM can differ dramatically for different timescales because of the different response mechanisms, highlighting the complex dynamics of the East Asian monsoon system and the challenges for future projection.
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    The mitogenic effects of periodic mechanical stress on chondrocytes have been studied extensively but the mechanisms whereby chondrocytes sense and respond to periodic mechanical stress remain a matter of debate. We explored the signal... more
    The mitogenic effects of periodic mechanical stress on chondrocytes have been studied extensively but the mechanisms whereby chondrocytes sense and respond to periodic mechanical stress remain a matter of debate. We explored the signal transduction pathways of chondrocyte proliferation and matrix synthesis under periodic mechanical stress. In particular, we sought to identify the role of the MEK1/2-ERK1/2 signaling pathway in chondrocyte proliferation and matrix synthesis following cyclic physiologic mechanical compression. Under periodic mechanical stress, both rat chondrocyte proliferation and matrix synthesis were significantly increased (P < 0.05) and were associated with increases in the phosphorylation of Src, PLCγ1, MEK1/2, and ERK1/2 (P < 0.05). Pretreatment with the MEK1/2-ERK1/2 selective inhibitor, PD98059, and shRNA targeted to ERK1/2 reduced periodic mechanical stress-induced chondrocyte proliferation and matrix synthesis (P…
    During the last deglaciation, wetter conditions developed abruptly ~14,700 years ago in southeastern equatorial and northern Africa and continued into the Holocene. Explaining the abrupt onset and hemispheric coherence of this early... more
    During the last deglaciation, wetter conditions developed abruptly ~14,700 years ago in southeastern equatorial and northern Africa and continued into the Holocene. Explaining the abrupt onset and hemispheric coherence of this early African Humid Period is challenging due to opposing seasonal insolation patterns. In this work, we use a transient simulation with a climate model that provides a mechanistic understanding of deglacial tropical African precipitation changes. Our results show that meltwater-induced reduction in the Atlantic meridional overturning circulation (AMOC) during the early deglaciation suppressed precipitation in both regions. Once the AMOC reestablished, wetter conditions developed north of the equator in response to high summer insolation and increasing greenhouse gas (GHG) concentrations, whereas wetter conditions south of the equator were a response primarily to the GHG increase.
    Records from South America show that modern ENSO (El Nino-Southern Oscillation) did not exist 7000 cal yr B.P. and has developed progressively since then. There has been little information available on oceanic conditions in the eastern... more
    Records from South America show that modern ENSO (El Nino-Southern Oscillation) did not exist 7000 cal yr B.P. and has developed progressively since then. There has been little information available on oceanic conditions in the eastern equatorial Pacific (EEP) to constrain explanations for ENSO onset. We report quantitative observations on thermocline and mixed-layer conditions in the EEP during ENSO start up. We found important changes in both the thermocline and the mixed layer, indicating increased upwelling of cooler waters since 7000 cal yr B.P. This resulted from change in the source and/or properties of waters supplying the Equatorial Undercurrent, which feeds upwelling along the equator and the Peru margin. Modeling shows that ENSO is sensitive to subsurface conditions in the eastern equatorial Pacific and that the changes in the thermocline we observed were driven by extratropical processes, giving these a role in conditioning the development of ENSO. This is in contrast to...
    While there is very little known about the physiology and function of the CRF 2 subfamily of receptors, a substantial amount of preclinical and clinical data exists that suggests that CRF and its high-affinity receptor play a major role... more
    While there is very little known about the physiology and function of the CRF 2 subfamily of receptors, a substantial amount of preclinical and clinical data exists that suggests that CRF and its high-affinity receptor play a major role in mediating various neurological and ...
    This study analyzes the response of global water vapor to global warming in a series of fully coupled climate model simulations. The authors find that a roughly 7% K−1 rate of increase of water vapor with global surface temperature is... more
    This study analyzes the response of global water vapor to global warming in a series of fully coupled climate model simulations. The authors find that a roughly 7% K−1 rate of increase of water vapor with global surface temperature is robust only for rapid anthropogenic-like climate change. For slower warming that occurred naturally in the past, the Southern Ocean has time to equilibrate, producing a different pattern of surface warming, so that water vapor increases at only 4.2% K−1. This lower rate of increase of water vapor with warming is not due to relative humidity changes or differences in mean lower-tropospheric temperature. A temperature of over 80°C would be required in the Clausius–Clapeyron relationship to match the 4.2% K−1 rate of increase. Instead, the low rate of increase is due to spatially heterogeneous warming. During slower global warming, there is enhanced warming at southern high latitudes, and hence less warming in the tropics per kelvin of global surface temp...
    The feedback between global vegetation greenness and surface air temperature and precipitation is assessed using remote sensing observations of monthly fraction of photosynthetically active radiation (FPAR) for 1982 to 2000 with a 2.5°... more
    The feedback between global vegetation greenness and surface air temperature and precipitation is assessed using remote sensing observations of monthly fraction of photosynthetically active radiation (FPAR) for 1982 to 2000 with a 2.5° grid resolution. Lead/lag correlations are used to infer vegetation–climate interactions. Furthermore, a statistical method is used to quantify the efficiency of vegetation feedback on climate in the observations. This feedback analysis provides a first quantitative assessment of global vegetation feedback on climate. In northern mid- and high latitudes, vegetation variability is found to be driven predominantly by temperature; in the meantime, vegetation also exerts a strong positive feedback on temperature with the feedback accounting for over 10%–25% of the total monthly temperature variance. The strongest positive feedback occurs in the boreal regions of southern Canada/northern United States, northern Europe, and southern Siberia, where the feedb...
    Rising levels of carbon dioxide since the preindustrial era have likely contributed to an observed warming of the global surface, and observations show global greening and an expansion of boreal forests. This study reproduces observed... more
    Rising levels of carbon dioxide since the preindustrial era have likely contributed to an observed warming of the global surface, and observations show global greening and an expansion of boreal forests. This study reproduces observed climate and vegetation trends associated with rising CO2 using a fully coupled atmosphere–ocean–land surface GCM with dynamic vegetation and decomposes the effects into physiological and radiative components. The simulated warming trend, strongest at high latitudes, was dominated by the radiative effect, although the physiological effect of CO2 on vegetation (CO2 fertilization) contributed to significant wintertime warming over northern Europe and central and eastern Asia. The net global greening of the model was primarily due to the physiological effect of increasing CO2, while the radiative and physiological effects combined to produce a poleward expansion of the boreal forests. Observed and simulated trends in tree ring width are consistent with the...
    A coupled ocean‐atmosphere general circulation model is used to investigate climatic shift of El Nino in the Holocene. The model simulates a reduced ENSO intensity in the early and mid‐Holocene, in agreement with paleoclimate record. The... more
    A coupled ocean‐atmosphere general circulation model is used to investigate climatic shift of El Nino in the Holocene. The model simulates a reduced ENSO intensity in the early and mid‐Holocene, in agreement with paleoclimate record. The ENSO reduction is proposed ...
    The effect of the gyre north-south width on the inertial recirculation has been studied using a non-eddy resolving QG model. It is found that for the traditional sinusoidal Ekman pumping profile with a fixed maximum interior transport and... more
    The effect of the gyre north-south width on the inertial recirculation has been studied using a non-eddy resolving QG model. It is found that for the traditional sinusoidal Ekman pumping profile with a fixed maximum interior transport and fixed viscosity, a smaller north-south width will produce a stronger inertial recirculation, unless the north-south width of the gyre becomes comparable with
    Several studies have shown that the use of different calendars in paleoclimate simulations can cause artificial phase shifts on insolation forcing and climatic responses. However, these important calendar corrections are still often... more
    Several studies have shown that the use of different calendars in paleoclimate simulations can cause artificial phase shifts on insolation forcing and climatic responses. However, these important calendar corrections are still often neglected. In this paper, the phase shifts at the precession band is quantitatively assessed by converting the model data of the transient GCM climate simulation of Kutzbach et
    First generation EGFR TKIs (gefitinib, erlotinib) provide significant clinical benefit for NSCLC cancer patients with oncogenic EGFR mutations. Ultimately, these patients disease progresses, often driven by a second-site mutation in the... more
    First generation EGFR TKIs (gefitinib, erlotinib) provide significant clinical benefit for NSCLC cancer patients with oncogenic EGFR mutations. Ultimately, these patients disease progresses, often driven by a second-site mutation in the EGFR kinase domain (T790M). Another liability of the first generation drugs is severe adverse events driven by inhibition of WT EGFR. As such, our goal was to develop a highly potent irreversible inhibitor with the largest selectivity ratio between the drug-resistant double mutants (L858R/T790M, Del/T790M) and WT EGFR. A unique approach to develop covalent inhibitors, optimization of reversible binding affinity, served as a cornerstone of this effort. PF-06459988, was discovered as a novel, third generation irreversible inhibitor, which demonstrates (i) high potency and specificity to the T790M-containing double mutant EGFRs, (ii) minimal intrinsic chemical reactivity of the electrophilic warhead, (iii) greatly reduced proteome reactivity relative to...
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    Most previous studies have proven the local negative heat flux feedback (the surface heat flux response to SST anomalies) in the midlatitude areas. However, it is uncertain whether a nonlocal heat flux feedback can be observed. In this... more
    Most previous studies have proven the local negative heat flux feedback (the surface heat flux response to SST anomalies) in the midlatitude areas. However, it is uncertain whether a nonlocal heat flux feedback can be observed. In this paper, the generalized equilibrium feedback assessment (GEFA) method is employed to examine the full surface turbulent heat flux response to SST in the North Atlantic Ocean using NCEP–NCAR reanalysis data. The results not only confirm the dominant local negative feedback, but also indicate a robust nonlocal positive feedback of the Gulf Stream Extension (GSE) SST to the downstream heat flux in the subpolar region. This nonlocal feedback presents a strong seasonality, with response magnitudes of [Formula: see text] in winter and [Formula: see text] in summer. Further study indicates that the nonlocal effect is initiated by the adjustments of the downstream surface wind to the GSE SST anomalies.
    The evolution of decadal subduction temperature anomalies in the subtropical North Pacific is studied using a simple and a complex ocean model. It is found that the amplitude of the temperature anomaly decays faster than a passive tracer... more
    The evolution of decadal subduction temperature anomalies in the subtropical North Pacific is studied using a simple and a complex ocean model. It is found that the amplitude of the temperature anomaly decays faster than a passive tracer by about 30%-50%. The faster decay is caused by the divergence of group velocity of the subduction planetary wave, which is contributed to, significantly, by the divergent Sverdrup flow in the subtropical gyre. The temperature anomaly also seems to propagate southward slower than the passive tracer, or mean ventilation flow. This occurs because the mean potential vorticity gradient in the ventilated zone is directed eastward; the associated general beta effect produces a northward propagation for the temperature anomaly, partially canceling the southward advection by the ventilation flow.
    ABSTRACT This study investigates the direct impact of El Niño in the tropical Pacific on the East Asian summer precipitation . Generalized equilibrium feedback assessment is used to isolate this direct impact from interrelated ocean... more
    ABSTRACT This study investigates the direct impact of El Niño in the tropical Pacific on the East Asian summer precipitation . Generalized equilibrium feedback assessment is used to isolate this direct impact from interrelated ocean forcings in the observations. Results indicate that the El Niño can directly influence the summer precipitation in East China significantly. The precipitation response presents a tri-pole pattern, with anomalous wet in the Southeast and the Northeast China and anomalous dry in the northern China. Amplitude of the precipitation response is around 20 % of the total precipitation for 1 °C El Niño forcing in most area of the East China, with maximal response up to 30 %/°C. The tri-pole precipitation response is attributed to an El Niño-induced cyclonic anomaly in the Northeast Asia and an anticyclonic anomaly in the western North Pacific (WNP). The anomalous cyclone deepens the East Asian trough southwestward, favoring an air ascending in front of the trough in the Southeast and the Northeast China, and an air descending at the rear of the trough in the northern China. The anomalous anticyclone in the WNP strengthens the WNP Subtropical High northeastward, providing adequate water vapor to the Southeast China. The anomalous cyclone and anomalous anticyclone work together to generate the tri-pole precipitation response pattern in the East China. Further investigation suggests that these two key anomalous circulations are part of a northwestward propagating Rossby wave, which is excited by the El Niño warming-induced convection over the subtropical west-central Pacific. This study can serve as a reference for the prediction of the East Asian precipitation in both the developing and decaying summer of El Niño.
    ABSTRACT The dynamics of glacialeinterglacial monsoon variability can be attributed to orbitally induced changes in summer insolation and internal boundary conditions. However, the relative impacts of astronomical and internal factors on... more
    ABSTRACT The dynamics of glacialeinterglacial monsoon variability can be attributed to orbitally induced changes in summer insolation and internal boundary conditions. However, the relative impacts of astronomical and internal factors on East Asian summer monsoon variability remain controversial. Here we combine proxy data and model results to evaluate the response of East Asian summer monsoon change to these forcings. d13C of loess carbonate, a sensitive summer monsoon proxy from the western Chinese Loess Plateau, demonstrates coexistence of distinct 100-, 41- and 23-ka periods, in contrast to precession-dominated speleothem d18O records in South China. Model results indicate that insolation, ice and CO2 have distinct impacts on summer precipitation changes in East Asia, whereas their relative impacts are spatially different, with a relatively stronger insolation effect in south China and a more dominant ice/CO2 influence in north China. Combined proxy data and model results indicate that East Asian summer monsoon variability was induced by integrated effects of summer insolation and changing boundary conditions (e.g., ice sheets and CO2 concentration). Our proxy-model comparison further suggests that gradual weakening of the summer monsoon related to slowly decreasing summer insolation at astronomical timescales will be likely overwhelmed by the projected ongoing anthropogenic CO2 emissions.
    Genetic diversity level ofCathaya argyrophylla was confirmed by random amplified polymorphic DNA (RAPD) markers. Seventy five samples (individuals), collected from Hunan and Sichuan provinces of China were used in the study. 21 10-mer... more
    Genetic diversity level ofCathaya argyrophylla was confirmed by random amplified polymorphic DNA (RAPD) markers. Seventy five samples (individuals), collected from Hunan and Sichuan provinces of China were used in the study. 21 10-mer oligonucleotide primers detected 106 sites, and 34 (32%) of them were polymorphic. The level of genetic variation in C.argyrophylla was lower than those of other conifers, and was considered to be associated with the complexity of habitats. The percentages of polymorphic sites (PPS) in the Hunan and Sichuan populations were 18% and 25% respectively. 7.99% of genetic variation existed between the two populations; this value was higher than the mean value (6.8%) among populations in conifers displayed by allozyme. Some subpopulations ofC. argyrophylla were greatly differentiated because of site mutation and genetic drift. The highest value of genetic difference between subpopulations amounted to 16. 23%. In addition, a concept of diversity coefficient (D...
    ... 91191 Gif sur Yvette cedex France CHRIS D. HEWITT (chris.hewitt@metoffice.com) Hadley Centre for Climate Prediction and Research Met Office FitzRoy Road, Exceter Devon, EX1 3BP UK AKIO KITOH (kitoh@mri-jma.go ...
    Greenland ice core water isotopic composition (δ(18)O) provides detailed evidence for abrupt climate changes but is by itself insufficient for quantitative reconstruction of past temperatures and their spatial patterns. We investigate... more
    Greenland ice core water isotopic composition (δ(18)O) provides detailed evidence for abrupt climate changes but is by itself insufficient for quantitative reconstruction of past temperatures and their spatial patterns. We investigate Greenland temperature evolution during the last deglaciation using independent reconstructions from three ice cores and simulations with a coupled ocean-atmosphere climate model. Contrary to the traditional δ(18)O interpretation, the Younger Dryas period was 4.5° ± 2°C warmer than the Oldest Dryas, due to increased carbon dioxide forcing and summer insolation. The magnitude of abrupt temperature changes is larger in central Greenland (9° to 14°C) than in the northwest (5° to 9°C), fingerprinting a North Atlantic origin. Simulated changes in temperature seasonality closely track changes in the Atlantic overturning strength and support the hypothesis that abrupt climate change is mostly a winter phenomenon.
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    The temporal-spatial structure and the formation mechanisms of the South China Sea (SCS) circulation are studied using the Princeton Ocean Model (POM). The model well reproduces the observed sea surface height (SSH) annual cycle and some... more
    The temporal-spatial structure and the formation mechanisms of the South China Sea (SCS) circulation are studied using the Princeton Ocean Model (POM). The model well reproduces the observed sea surface height (SSH) annual cycle and some current system such as the SCS Western Boundary Current (SCSWBC) system and the Kuroshio Loop Current (KLC). Four sensitivity experiments are carried out to
    An analysis of cyclone activity in winter associated with years of strong and weak Aleutian low in the North Pacific is presented. From 1958 to 2004, 10 winters with a strong Aleutian low are defined as the strong years, while 8 winters... more
    An analysis of cyclone activity in winter associated with years of strong and weak Aleutian low in the North Pacific is presented. From 1958 to 2004, 10 winters with a strong Aleutian low are defined as the strong years, while 8 winters with a weak Aleutian low are defined as the weak years. Employing a system-centered Lagrangian method, some characteristics of the cyclone activity in both sets of years are revealed. The cyclone frequency, duration, and intensity are nearly the same in both strong and weak years. The cyclone tracks in the strong years are more zonal than those in the weak years. More intense cyclone events and more large cyclone cases occur in strong years than in weak years and the deepening of cyclones in strong years is stronger than that in weak years. The analyses of geopotential height, wind, stationary Rossby wavenumber, and Eady growth rate index at 500 or 300 hPa reveal that conditions are favorable for more zonal tracks and greater cyclone growth in strong...
    Insolation forcing related to the earth’s orbital parameters is known to play an important role in regulating variations of the South Asian monsoon on geological time scales. The influence of insolation forcing on the Indian Ocean and... more
    Insolation forcing related to the earth’s orbital parameters is known to play an important role in regulating variations of the South Asian monsoon on geological time scales. The influence of insolation forcing on the Indian Ocean and Asian monsoon is studied in this paper by isolating the Northern and Southern Hemispheric insolation changes in several numerical experiments with a coupled ocean–atmosphere model. The focus is on the response of South Asian summer rainfall (monsoon strength) with emphasis on impacts of the local versus remote forcing and possible mechanisms. The model results show that both Northern Hemisphere (NH) and Southern Hemisphere (SH) summer insolation changes affect the Indian Ocean and Asian monsoon as a local forcing (in the same hemisphere), but only the SH changes result in remote (in the other hemisphere) forcing. The NH insolation change has a local and immediate impact on NH summer monsoons from North Africa to South and East Asia, while the SH insola...
    Three statistic methods [generalized equilibrium feedback analysis (GEFA), linear inverse modeling (LIM), and fluctuation–dissipation theorem (FDT)] are compared for their assessment of the atmospheric response to sea surface temperature... more
    Three statistic methods [generalized equilibrium feedback analysis (GEFA), linear inverse modeling (LIM), and fluctuation–dissipation theorem (FDT)] are compared for their assessment of the atmospheric response to sea surface temperature variability in the coupled climate system with a sample length comparable with the observations (decades). The comparison is made first in an idealized coupled model and then in the observations. For daily to pentad data, for a linear stochastic system, the simple model study demonstrates that all three methods are able to provide a consistent assessment of the atmospheric response. For monthly data, GEFA is able to produce an assessment comparable with the daily or pentad assessments using the three methods. The consistence of the three methods is further confirmed in the observations for the responses of the atmospheric geopotential height (at 200 hPa) to the tropical ENSO mode and the North Pacific mode. It is found that the three methods produce...
    The authors present a comprehensive assessment of the observed atmospheric response to SST variability modes in a unified approach using the Generalized Equilibrium Feedback Analysis (GEFA). This study confirms a dominant atmospheric... more
    The authors present a comprehensive assessment of the observed atmospheric response to SST variability modes in a unified approach using the Generalized Equilibrium Feedback Analysis (GEFA). This study confirms a dominant atmospheric response to the tropical SST variability associated with ENSO. A further analysis shows that the classical response to ENSO consists of two parts, one responding to the tropical Pacific ENSO mode and the other to the tropical Indian Ocean monopole (IOM) mode. The Pacific ENSO generates a significant baroclinic Rossby wave response locally over the tropical Pacific as well as equivalent barotropic wave train responses remotely into the extratropics. The IOM mode forces a strongly zonally symmetric response throughout the tropics and the extratropics. Furthermore, modest atmospheric responses to other oceanic modes were identified. For example, the North Pacific SST variability mode appears to generate an equivalent barotropic warm SST-ridge response loca...
    Afforestation has been proposed as a climate change mitigation strategy by sequestrating atmospheric carbon dioxide. With the goal of increasing carbon sequestration, a Congressional project has been planned to afforest about 18 million... more
    Afforestation has been proposed as a climate change mitigation strategy by sequestrating atmospheric carbon dioxide. With the goal of increasing carbon sequestration, a Congressional project has been planned to afforest about 18 million acres by 2020 in the Southeast United States (SEUS), the Great Lake states, and the Corn Belt states. However, biophysical feedbacks of afforestation have the potential to counter the beneficial climatic consequences of carbon sequestration. To assess the potential biophysical effects of afforestation over the SEUS, the authors designed a set of initial value ensemble experiments and long-term quasi-equilibrium experiments in a fully coupled Community Climate System Model, version 3.5 (CCSM3.5). Model results show that afforestation over the SEUS not only has a local cooling effect in boreal summer [June–August (JJA)] at short and long time scales but also induces remote warming over adjacent regions of the SEUS at long time scales. Precipitation, in...
    The authors investigate the relationship between sea surface temperature (SST) in the tropical Indian Ocean (TIO) and the seasonal atmosphere circulation in the Asian monsoon region (AMR) using the maximum covariance analyses (MCAs). The... more
    The authors investigate the relationship between sea surface temperature (SST) in the tropical Indian Ocean (TIO) and the seasonal atmosphere circulation in the Asian monsoon region (AMR) using the maximum covariance analyses (MCAs). The results show that the Asian monsoon circulation is significantly correlated with two dominant SST anomaly (SSTA) modes: the Indian Ocean Basin mode (IOB) and the Indian Ocean dipole mode (IOD). The peak SSTA of the IOB appears in spring and has a much stronger relationship with the Asian summer monsoon than the peak of the IOD does, whereas the peak SSTA for the IOD appears in fall and shows a stronger link to the Asian winter monsoon than to the Asian summer monsoon. In addition, the IOB in spring has a relatively stronger link with the atmospheric circulation in summer than in other seasons. The large-scale atmospheric circulation and SSTA patterns of the covariability of the first two dominant MCA modes are described. For the first MCA mode, a wa...
    This study investigates the influence of different sea surface temperature (SST) modes on the winter temperature in China using the generalized equilibrium feedback assessment (GEFA). It is found that the second EOF mode of winter... more
    This study investigates the influence of different sea surface temperature (SST) modes on the winter temperature in China using the generalized equilibrium feedback assessment (GEFA). It is found that the second EOF mode of winter temperature in China during 1958–2010 shows a typical northeast–southwest (NE–SW) pattern, which is a major spatial mode of Chinese winter temperature at interannual scales. The winter temperature of the NE–SW pattern is forced mainly by SST modes in the tropical Pacific and Atlantic. For 2009/10, the tropical Pacific El Niño mode and tropical Atlantic tripole mode have the largest contribution to the response. The physical mechanism of the cold northeast–warm southwest (CNE–WSW) pattern is also explained in terms of GEFA of the responses of the atmospheric circulation. The northerly flow at the low level transports cold air to northern and northeastern China, resulting in a lower temperature there. Meanwhile, the anomaly meridional wind advects warm air f...
    Ensemble-based parameter estimation for a climate model is emerging as an important topic in climate research. For a complex system such as a coupled ocean–atmosphere general circulation model, the sensitivity and response of a model... more
    Ensemble-based parameter estimation for a climate model is emerging as an important topic in climate research. For a complex system such as a coupled ocean–atmosphere general circulation model, the sensitivity and response of a model variable to a model parameter could vary spatially and temporally. Here, an adaptive spatial average (ASA) algorithm is proposed to increase the efficiency of parameter estimation. Refined from a previous spatial average method, the ASA uses the ensemble spread as the criterion for selecting “good” values from the spatially varying posterior estimated parameter values; these good values are then averaged to give the final global uniform posterior parameter. In comparison with existing methods, the ASA parameter estimation has a superior performance: faster convergence and enhanced signal-to-noise ratio.
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    ABSTRACT Aim We play the role of an ice age ecologist (IAE) charged with conserving biodiversity during the climate changes accompanying the last deglaciation. We develop reserve-selection strategies for the IAE and check them against... more
    ABSTRACT Aim We play the role of an ice age ecologist (IAE) charged with conserving biodiversity during the climate changes accompanying the last deglaciation. We develop reserve-selection strategies for the IAE and check them against rankings based on modern data. Location Northern and eastern North America. Methods Three reserve-selection strategies are developed. (1) Abiotic: the IAE uses no information about speciesclimate relationships, instead maximizing the climatic and geographic dispersion of reserves. (2) Species distribution models (SDMs): the IAE uses boosted-regression trees calibrated against pollen data and CCSM3 palaeoclimatic simulations from 21 to 15 ka bp to predict modern taxon distributions, then uses these as input to the Zonation reserve-ranking program. (3) Rank-and-regress: regression models are used to identify climatic predictors of zonation rankings. All strategies are assessed against a Zonation ranking based on modern pollen distributions. Analysis units are ecoregions and grid cells. Results The abiotic strategy has a negative or no correlation between predicted and actual rankings. The SDM-based strategy fares better, with a significantly positive area-corrected correlation (r= 0.474, P < 0.001) between predicted and actual rankings. Predictive ability drops when grid cells are the analysis unit (r= 0.217, P = 0.058). Predictive ability for the rank-and-regress strategy is similar to the SDM results. Main conclusions For the IAE, SDMs improve the predictive ability of reserve-selection strategies. However, predictive ability is limited overall, probably due to shifted realized niches during past no-analogue climates, new species interactions as species responded individually to climate change, and other environmental changes not included in the model. Twenty-first-century conservation planning also faces these challenges, and is further complicated by other anthropogenic impacts. The IAE's limited success does not preclude the use of climate scenarios and niche-based SDMs when developing adaptation strategies, but suggests that such tools offer at best only a rough guide to identifying possible areas of future conservation value.
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    The Younger Dryas chronozone, recognised in northern high-latitude areas as a cold event between 11 000 and 10 000 14 C yr BP (12 900–11 600 cal. yr BP), seems to manifest itself globally in different ways. Here, we examine well-dated... more
    The Younger Dryas chronozone, recognised in northern high-latitude areas as a cold event between 11 000 and 10 000 14 C yr BP (12 900–11 600 cal. yr BP), seems to manifest itself globally in different ways. Here, we examine well-dated stratigraphic sequences together with high-...
    ABSTRACT Using the National Center for Atmospheric Research Community Climate System Model Version 3.5, this paper examines the climatic effects of afforestation in the East China monsoon region with a focus on land–atmosphere... more
    ABSTRACT Using the National Center for Atmospheric Research Community Climate System Model Version 3.5, this paper examines the climatic effects of afforestation in the East China monsoon region with a focus on land–atmosphere interactions and the modulating influence of ocean variability. In response to afforestation, the local surface air temperature significantly decreases in summer and increases in winter. The summer cooling is attributed to enhanced evapotranspiration from increased tree cover. During winter, afforestation induces greater roughness and weaker winds over the adjacent coastal ocean, leading to diminished latent heat flux and increased sea-surface temperature (SST). The enhanced SST supports greater atmospheric water vapor, which is accompanied by anomalous wind, and transported into the East China monsoon region. The increase in atmospheric water vapor favors more cloud cover and precipitation, especially in the eastern afforestation region. Furthermore, the increase in atmospheric water vapor and cloud cover produce a greenhouse effect, raising the wintertime surface air temperature. By comparing simulations in which ocean temperature are either fixed or variable, we demonstrate that a significant hydrologic response in East China to afforestation only occurs if ocean temperatures are allowed to vary and the oceanic source of moisture to the continent is enhanced.
    To study the time-dependent response of the Asian summer monsoon to obliquity forcing, we analyze a 284,000-year long transient simulation produced by a fully coupled global climate model (GCM) using a new phase mapping (PHASEMAP)... more
    To study the time-dependent response of the Asian summer monsoon to obliquity forcing, we analyze a 284,000-year long transient simulation produced by a fully coupled global climate model (GCM) using a new phase mapping (PHASEMAP) approach. Here we focus on understanding the phase response of monsoonal circulation to insolation forcing at the Earth-orbital obliquity band (41 Kyr). Our results show that the East Asian summer monsoon (EASM) can be divided into two geographic regions: the North East Asian summer monsoon (NEASM) and the South East Asian summer monsoon (SEASM). The Indian summer monsoon (ISM) and the SEASM are in phase at the obliquity band, strengthened with an increase in obliquity from Obliquity minima (Omin) to Obliquity maxima (Omax). The NEASM is out of phase with the ISM and SEASM, weakened with an increase in obliquity from Omin to Omax. We hypothesize that the inverse phase between the NEASM and the ISM at the obliquity band results from an ISM-NEASM teleconnection linked to the formation mechanism of the Bonin High.
    Several studies have shown that the use of different calendars in paleoclimate simulations can cause artificial phase shifts on insolation forcing and climatic responses. However, these important calendar corrections are still often... more
    Several studies have shown that the use of different calendars in paleoclimate simulations can cause artificial phase shifts on insolation forcing and climatic responses. However, these important calendar corrections are still often neglected. In this paper, the phase shifts at the precession band is quantitatively assessed by converting the model data of the transient GCM climate simulation of Kutzbach et
    Chinese pine (Pinus tabulaeformis Carr.) trees from the Helan Mountain range in central China have been used to reconstruct total January–July precipitation from AD 1775 to 1998. For the calibration period R2adj = 0.52. Narrow rings are... more
    Chinese pine (Pinus tabulaeformis Carr.) trees from the Helan Mountain range in central China have been used to reconstruct total January–July precipitation from AD 1775 to 1998. For the calibration period R2adj = 0.52. Narrow rings are associated with below-average precipitation from March through August. Wide rings are produced in years when the East Asian summer monsoon front arrives early. We use local historical writings over the last 300 years about extreme climatic conditions between spring and early summer to verify the extreme years. Most of the extreme dry years could be identified in local historical documents. Another East Asian summer monsoon front related precipitation reconstruction from northern Helan Mountain is also used to verify this reconstruction. They are well correlated from year to year, with a correlation coefficient of 0.52 (N = 218), and the wet or dry extreme events are well matched in many cases. This comparison could indicate a spatial and temporal con...
    Pteridinones were designed based on a non-selective kinase template. Because of the uniqueness of the PI3K and mTOR binding pockets, a methyl group was introduced to C-4 position of the peteridinone core to give compounds with excellent... more
    Pteridinones were designed based on a non-selective kinase template. Because of the uniqueness of the PI3K and mTOR binding pockets, a methyl group was introduced to C-4 position of the peteridinone core to give compounds with excellent selectivity for PI3K and mTOR. This series of compounds were further optimized to improve their potency against PI3Kα and mTOR. Finally, orally active compounds with improved solubility and robust in vivo efficacy in tumor growth inhibition were identified as well.
    PI3K, AKT, and mTOR are key kinases from PI3K signaling pathway being extensively pursued to treat a variety of cancers in oncology. To search for a structurally differentiated back-up candidate to PF-04691502, which is currently in phase... more
    PI3K, AKT, and mTOR are key kinases from PI3K signaling pathway being extensively pursued to treat a variety of cancers in oncology. To search for a structurally differentiated back-up candidate to PF-04691502, which is currently in phase I/II clinical trials for treating solid tumors, a lead optimization effort was carried out with a tricyclic imidazo[1,5]naphthyridine series. Integration of structure-based drug design and physical properties-based optimization yielded a potent and selective PI3K/mTOR dual kinase inhibitor PF-04979064. This manuscript discusses the lead optimization for the tricyclic series, which both improved the in vitro potency and addressed a number of ADMET issues including high metabolic clearance mediated by both P450 and aldehyde oxidase (AO), poor permeability, and poor solubility. An empirical scaling tool was developed to predict human clearance from in vitro human liver S9 assay data for tricyclic derivatives that were AO substrates.