Spliced-leader RNA trans splicing in a chordate, Oikopleura dioica, with a compact genome (Q39757380)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15314184%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

title

Spliced-leader RNA trans splicing in a chordate, Oikopleura dioica, with a compact genome (English)

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31 December 2019

Oikopleura dioica

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31 December 2019

Philippe Ganot

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31 December 2019

Torben Kallesøe

series ordinal

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31 December 2019

Daniel Chourrout

series ordinal

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31 December 2019

Eric M Thompson

series ordinal

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31 December 2019

language of work or name

English

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publication date

1 September 2004

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Molecular and Cellular Biology

31 December 2019

published in

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31 December 2019

volume

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31 December 2019

issue

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31 December 2019

page(s)

7795-7805

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Mfold web server for nucleic acid folding and hybridization prediction

31 December 2019

cites work

1 reference

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22 September 2017

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Shared strategies in gene organization among prokaryotes and eukaryotes

22 September 2017

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Alternative pre-mRNA splicing and proteome expansion in metazoans

22 September 2017

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Life without transcriptional control? From fly to man and back again

22 September 2017

1 reference

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Miniature Genome in the Marine Chordate Oikopleura dioica

22 September 2017

1 reference

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Evolutionary origin of SL-addition trans-splicing: still an enigma

22 September 2017

1 reference

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A complex containing CstF-64 and the SL2 snRNP connects mRNA 3' end formation and trans-splicing in C. elegans operons.

22 September 2017

1 reference

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3' splice site recognition in nematode trans-splicing involves enhancer-dependent recruitment of U2 snRNP

22 September 2017

1 reference

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Spliceosomal UsnRNP biogenesis, structure and function

22 September 2017

1 reference

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Trans-spliced leader addition to mRNAs in a cnidarian

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

mRNA 5'-leader trans-splicing in the chordates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Intercistronic region required for polycistronic pre-mRNA processing in Caenorhabditis elegans

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Transcription of the kinetoplastid spliced leader RNA gene.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

SR proteins are required for nematode trans-splicing in vitro

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Transcription termination and 3'-End processing of the spliced leader RNA in kinetoplastids

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

SL1 trans splicing and 3'-end formation in a novel class of Caenorhabditis elegans operon

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Exonic sequences in the 5' untranslated region of alpha-tubulin mRNA modulate trans splicing in Trypanosoma brucei

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Mechanism and regulation of mRNA polyadenylation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Operons and SL2 trans-splicing exist in nematodes outside the genus Caenorhabditis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Surprising diversity and distribution of spliced leader RNAs in flatworms

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Solution structure of the donor site of a trans-splicing RNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Functional analysis of a C. elegans trans-splice acceptor

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

The concerted evolution of 5S ribosomal genes linked to the repeat units of other multigene families

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Trans-splicing and polycistronic transcription in Caenorhabditis elegans

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Mutational analysis of 3' splice site selection during trans-splicing

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

The Leishmania tarentolae spliced leader contains determinants for association with polysomes

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Relationship between 3' end formation and SL2-specific trans-splicing in polycistronic Caenorhabditis elegans pre-mRNA processing

15 June 2018

1 reference

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Multiple requirements for nematode spliced leader RNP function in trans-splicing

15 June 2018

1 reference

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Trans splicing of nematode pre-messenger RNA in vitro

15 June 2018

1 reference

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Operon structure and trans-splicing in the nematode Pristionchus pacificus.

15 June 2018

1 reference

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tbCPSF30 depletion by RNA interference disrupts polycistronic RNA processing in Trypanosoma brucei.

20 August 2018

1 reference

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Histone gene complement, variant expression, and mRNA processing in a urochordate Oikopleura dioica that undergoes extensive polyploidization

20 August 2018

1 reference

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Gene linkage and steady state RNAs suggest trans-splicing may be associated with a polycistronic transcript in Schistosoma mansoni

20 August 2018

1 reference

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Functional analysis of an intron 3' splice site in Caenorhabditis elegans.

20 August 2018

1 reference

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Most mRNAs in the nematode Ascaris lumbricoides are trans-spliced: a role for spliced leader addition in translational efficiency

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=507004

Characterization of trans-splicing in Euglenoids

20 August 2018

1 reference

12 December 2020

New components of the spliced leader RNP required for nematode trans-splicing

1 reference

12 December 2020

On the role of exon and intron sequences in trans-splicing utilization and cap 4 modification of the trypanosomatid Leptomonas collosoma SL RNA

1 reference

12 December 2020

Coupling of poly(A) site selection and trans-splicing in Leishmania

1 reference

12 December 2020

A common pyrimidine-rich motif governs trans-splicing and polyadenylation of tubulin polycistronic pre-mRNA in trypanosomes

1 reference

12 December 2020

The SL1 trans-spliced leader RNA performs an essential embryonic function in Caenorhabditis elegans that can also be supplied by SL2 RNA

1 reference

12 December 2020

10.1128/MCB.24.17.7795-7805.2004

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15314184%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15314184%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

PubMed publication ID

15314184

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15314184%20AND%20SRC:MED&resulttype=core&format=json