[go: up one dir, main page]

 
 
Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (36)

Search Parameters:
Keywords = pRTA

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
20 pages, 3168 KiB  
Article
Left Ventricular Systolic Dysfunction in NBCe1-B/C-Knockout Mice
by Clayton T. Brady, Aniko Marshall, Lisa A. Eagler, Thomas M. Pon, Michael E. Duffey, Brian R. Weil, Jennifer K. Lang and Mark D. Parker
Int. J. Mol. Sci. 2024, 25(17), 9610; https://doi.org/10.3390/ijms25179610 - 5 Sep 2024
Viewed by 246
Abstract
Congenital proximal renal tubular acidosis (pRTA) is a rare systemic disease caused by mutations in the SLC4A4 gene that encodes the electrogenic sodium bicarbonate cotransporter, NBCe1. The major NBCe1 protein variants are designated NBCe1-A, NBCe1-B, and NBCe1-C. NBCe1-A expression is kidney-specific, NBCe1-B is [...] Read more.
Congenital proximal renal tubular acidosis (pRTA) is a rare systemic disease caused by mutations in the SLC4A4 gene that encodes the electrogenic sodium bicarbonate cotransporter, NBCe1. The major NBCe1 protein variants are designated NBCe1-A, NBCe1-B, and NBCe1-C. NBCe1-A expression is kidney-specific, NBCe1-B is broadly expressed and is the only NBCe1 variant expressed in the heart, and NBCe1-C is a splice variant of NBCe1-B that is expressed in the brain. No cardiac manifestations have been reported from patients with pRTA, but studies in adult rats with virally induced reduction in cardiac NBCe1-B expression indicate that NBCe1-B loss leads to cardiac hypertrophy and prolonged QT intervals in rodents. NBCe1-null mice die shortly after weaning, so the consequence of congenital, global NBCe1 loss on the heart is unknown. To circumvent this issue, we characterized the cardiac function of NBCe1-B/C-null (KOb/c) mice that survive up to 2 months of age and which, due to the uninterrupted expression of NBCe1-A, do not exhibit the confounding acidemia of the globally null mice. In contrast to the viral knockdown model, cardiac hypertrophy was not present in KOb/c mice as assessed by heart-weight-to-body-weight ratios and cardiomyocyte cross-sectional area. However, echocardiographic analysis revealed reduced left ventricular ejection fraction, and intraventricular pressure–volume measurements demonstrated reduced load-independent contractility. We also observed increased QT length variation in KOb/c mice. Finally, using the calcium indicator Fura-2 AM, we observed a significant reduction in the amplitude of Ca2+ transients in paced KOb/c cardiomyocytes. These data indicate that congenital, global absence of NBCe1-B/C leads to impaired cardiac contractility and increased QT length variation in juvenile mice. It remains to be determined whether the cardiac phenotype in KOb/c mice is influenced by the absence of NBCe1-B/C from neuronal and endocrine tissues. Full article
Show Figures

Figure 1

Figure 1
<p>Structure and expression of NBCe1 major isoforms. (<b>A</b>) An illustration of NBCe1-B protein topology. All NBCe1 isoforms have 14 transmembrane spans (TM1–14), with soluble N-terminal and C-terminal (Nt and Ct) domains located within the cytoplasm. A glycosylated extracellular loop joins TMs 5 and 6. (<b>B</b>) An illustration of sequence differences between NBCe1 isoforms. Due to an alternative upstream promoter that controls NBCe1-B translation, there is a different 85-amino acid (aa) Nt sequence in NBCe1-B (shown in blue) that replaces the first 41 aa residues of NBCe1-A (shown in red). NBCe1-C is identical to NBCe1-B except that the last 46 aa residues of the Ct sequence in NBCe1-B (shown in yellow) are replaced by a different 61 aa sequence (shown in grey) as a consequence of alternative splicing. (<b>C</b>) An illustration of the expression pattern of NBCe1 protein isoforms. The figure was created using BioRender.com.</p>
Full article ">Figure 2
<p>Echocardiography demonstrates impaired left ventricular function in KO<sub>b/c</sub> mice. (<b>A</b>) Representative cross-sectional M-mode images of the left ventricle of WT and KO<sub>b/c</sub> mice between 4–5 weeks of age. (<b>B</b>) Heart rates were titrated to between ~400–500 BPM via isoflurane anesthesia. (<b>C</b>) KO<sub>b/c</sub> mice were found to have significantly greater left ventricle internal diameters during diastole (LVIDd) and systole (LVIDs). (<b>D</b>) KO<sub>b/c</sub> mice also had significantly greater end-diastolic volume (EDV) and end-systolic volume (ESV) than WT mice as calculated from LVID measurements. (<b>E</b>) There was no significant difference in stroke volume between WT and KO<sub>b/c</sub> mice. (<b>F</b>) The fractional shortening of KO<sub>b/c</sub> mice was significantly less than that of WT mice. (<b>G</b>) The ejection fraction of KO<sub>b/c</sub> mice was significantly less than that of WT mice. Data presented as mean ± SEM, n = 11–14 per group. Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. WT outliers (<span class="html-italic">n</span>) were excluded from LVIDd (1), LVIDs (1), EDV (1), ESV (1), SV (1), FS (1), and EF (2) data sets. KO<sub>b/c</sub> outliers (<span class="html-italic">n</span>) were excluded from heart rate (1), LVIDd (1), LVIDs (1), EDV (1), ESV (1), SV (2), FS (2), and EF (2) data sets. A significant difference between WT and KO<sub>b/c</sub> groups is indicated in the figure by * <span class="html-italic">p</span> &lt; 0.05, ** <span class="html-italic">p</span> &lt; 0.01, and *** <span class="html-italic">p</span> &lt; 0.001 calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test; ns (non-significant).</p>
Full article ">Figure 3
<p>Impaired left ventricular function in KO<sub>b/c</sub> mice is not attributable to differences in left ventricle wall thickness or systemic vascular resistance. During diastole there was no significant difference between the width of the WT and KO<sub>b/c</sub> left ventricle anterior (<b>A</b>) or posterior (<b>B</b>) wall. Similarly, during systole, there was no significant difference between the width of the WT and KO<sub>b/c</sub> left ventricle anterior (<b>C</b>) or posterior (<b>D</b>) wall. (<b>E</b>) There was no significant difference in systolic, diastolic, or mean arterial pressures of awake WT and KO<sub>b/c</sub>. Data presented as mean ± SEM, n = 11–14 per group (panels <b>A</b>–<b>D</b>) or 7–11 per group (panel <b>E</b>). Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. WT outliers (<span class="html-italic">n</span>) were excluded from LVAWd (1), LVPWd (1), and LVPWs (1) data sets. KO<sub>b/c</sub> outliers (<span class="html-italic">n</span>) were excluded from LVAWd (1) and LVAWs (1) data sets. Statistical significance calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test; ns (non-significant).</p>
Full article ">Figure 4
<p>Left intraventricular pressure–volume (PV) assessment reveals no significant difference between WT and KO<sub>b/c</sub> mice in load-dependent measures of contractility or relaxation. There was no significant difference between WT and KO<sub>b/c</sub> left ventricular end-systolic pressure (<b>A</b>) or end-diastolic pressure (<b>B</b>). There was no significant difference between WT and KO<sub>b/c</sub> mice in their left ventricular maximum rate of pressure change (dP/dt max, representing load-dependent contractility) (<b>C</b>) or in their minimum rate of pressure change (dP/dt min, representing load-dependent relaxation) (<b>D</b>). Heart rates were titrated to between ~300–500 BPM via isoflurane anesthesia (<b>E</b>). Data presented as mean ± SEM, n = 13–14 per group. Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. WT outliers (<span class="html-italic">n</span>) were excluded from end-systolic pressure (1), dP/dt max (1), and heart rate (1) data sets. KO<sub>b/c</sub> outliers (<span class="html-italic">n</span>) were excluded from end-systolic pressure (1), end-diastolic pressure (1), dP/dt max (1), dP/dt min (1), and heart rate (1) data sets. A significant difference between WT and KO<sub>b/c</sub> groups is indicated in the figure by *** <span class="html-italic">p</span> &lt; 0.001 calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test; ns (non-significant).</p>
Full article ">Figure 5
<p>Left intraventricular pressure–volume (PV) assessment during IVC occlusion reveals diminished load-independent contractility in KO<sub>b/c</sub> mice. Representative PV loops obtained in WT (<b>A</b>) and KO<sub>b/c</sub> (<b>B</b>) mice during IVC occlusion used as a preload reduction maneuver to assess load-independent contractility (slope of the end-systolic pressure volume relationship [ESPVR]) and relaxation (slope of the end-diastolic pressure volume relationship [EDPVR]). (<b>C</b>) The slope of the ESPVR was significantly reduced in KO<sub>b/c</sub> mice. (<b>D</b>) The slope of the EDPVR was not significantly different between WT and KO<sub>b/c</sub> mice. (<b>E</b>) Plotting ESPVR against heart rate for individual mice illustrates that ESPVR is independent of heart rate, supporting that although KO<sub>b/c</sub> mice have a slower heart rate than WT during this experiment, this does not account for the observed reduction in their ESPVR. Data presented as mean ± SEM, n = 12–15 per group. Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. A single WT outlier was excluded from the EDPVR data set. A single KO<sub>b/c</sub> outlier was excluded from the ESPVR data set. A significant difference between WT and KO<sub>b/c</sub> groups is indicated in the figure by ** <span class="html-italic">p</span> &lt; 0.01 calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test; ns (non-significant).</p>
Full article ">Figure 6
<p>Absence of cardiac hypertrophy in KO<sub>b/c</sub> hearts. (<b>A</b>) Representative low-magnification tiled images, with higher magnified regions of interest (black boxes in low-magnification images), taken of WT and KO<sub>b/c</sub> heart sections stained with H&amp;E. (<b>B</b>) The HW/BW ratio, an index of heart size, was not significantly different between WT and KO<sub>b/c</sub> mice. (<b>C</b>) There was also no significant difference in cross-sectional area between genotypes. Data presented as mean ± SEM, n = 16–18 per group (panel <b>B</b>) or 13–10 per group (panel <b>C</b>). Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. A single WT outlier was excluded from the HW/BW ratio data set. A single KO<sub>b/c</sub> outlier was excluded from the HW/BW ratio data set. For panel (<b>B</b>), the statistical significance was calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test. For panel (<b>C</b>), the cross-sectional area of 25–29 cardiomyocytes was measured across 5 images taken around the left ventricle and averaged for each individual mouse, with the statistical significance calculated using hierarchal statistical analysis (nested <span class="html-italic">T</span>-test). ns (non-significant).</p>
Full article ">Figure 7
<p>Increased QT length variation in KO<sub>b/c</sub> mice. Representative average ECG cycles of WT (<b>A</b>) and KO<sub>b/c</sub> (<b>B</b>) mice were created from 5 s segments of Lead-I recordings. The black line represents the average trace, with underlying grey lines representing each individual cycle. This method was applied to 30 s Lead-I recordings of WT and KO<sub>b/c</sub> mice from which QT length and QT length variation were assessed. QT length variation was calculated as the coefficient of variation (SD/mean) across 5 s intervals from a continuous 30 s ECG trace (i.e., 6 × 5 s intervals). (<b>C</b>) Heart rates were titrated to between ~350–500 BPM via isoflurane anesthesia. (<b>D</b>) There was no significant difference between the length of the QT interval in WT and KO<sub>b/c</sub> mice. (<b>E</b>) The QT length variation in KO<sub>b/c</sub> was significantly greater than in WT mice. Data presented as mean ± SEM, n = 11–13 per group. A significant difference between WT and KO<sub>b/c</sub> groups is indicated in the figure by *** <span class="html-italic">p</span> &lt; 0.001 calculated using Student’s unpaired 2-tailed <span class="html-italic">T</span>-test; ns (non-significant).</p>
Full article ">Figure 8
<p>KO<sub>b/c</sub> cardiomyocytes have reduced Ca<sup>2+</sup>-transient amplitude. (<b>A</b>) Representative Ca<sup>2+</sup> transients recorded in individual cardiomyocytes isolated from WT and KO<sub>b/c</sub> mice loaded with the intracellular Ca<sup>2+</sup> indicator Fura-2 AM. Traces represent the average of ~100 consecutive transients recorded in a single cardiomyocyte while paced at 5 Hz. (<b>B</b>) There was no significant difference between WT and KO<sub>b/c</sub> ‘baseline’ F<sub>340/380</sub> ratio. (<b>C</b>) The ‘peak amplitude’ was significantly decreased in KO<sub>b/c</sub> cardiomyocytes. (<b>D</b>) The ‘peak amplitude as % baseline’ (describing the % change from baseline of the Ca<sup>2+</sup> transient) was also significantly decreased in KO<sub>b/c</sub> cardiomyocytes. (<b>E</b>) There was no significant difference between WT and KO<sub>b/c</sub> in ‘time to peak’. (<b>F</b>) There was no significant difference between WT and KO<sub>b/c</sub> in ‘time to 90% baseline’. (<b>G</b>) There was no significant difference between WT and KO<sub>b/c</sub> the Ca<sup>2+</sup> exponential ‘decay constant (tau)’. Data presented as mean ± SEM, n = 8–9 per group with each point representing the mean of 9–12 cells. Outliers were defined a priori as any point &gt;2 standard deviations from the mean and were excluded from analysis. A single WT outlier was excluded from the ‘time to 90% baseline’ data set. A significant difference between WT and KO<sub>b/c</sub> groups is indicated in the figure by * <span class="html-italic">p</span> &lt; 0.05 calculated using hierarchal statistical analysis (nested <span class="html-italic">T</span>-test); ns (non-significant).</p>
Full article ">
10 pages, 2487 KiB  
Article
Augmented Reality Navigation System (SIRIO) for Neuroprotecion in Vertebral Tumoral Ablation
by Eliodoro Faiella, Rebecca Casati, Matteo Pileri, Giuseppina Pacella, Carlo Altomare, Elva Vergantino, Amalia Bruno, Bruno Beomonte Zobel and Rosario Francesco Grasso
Curr. Oncol. 2024, 31(9), 5088-5097; https://doi.org/10.3390/curroncol31090376 - 30 Aug 2024
Viewed by 440
Abstract
(1) This study evaluates the impact of the CT-guided SIRIO augmented reality navigation system on the procedural efficacy and clinical outcomes of neuroprotection in vertebral thermal ablation (RTA) for primary and metastatic bone tumors. (2) Methods: A retrospective non-randomized analysis of 28 vertebral [...] Read more.
(1) This study evaluates the impact of the CT-guided SIRIO augmented reality navigation system on the procedural efficacy and clinical outcomes of neuroprotection in vertebral thermal ablation (RTA) for primary and metastatic bone tumors. (2) Methods: A retrospective non-randomized analysis of 28 vertebral RTA procedures was conducted, comparing 12 SIRIO-assisted and 16 non-SIRIO-assisted procedures. The primary outcomes included dose-length product (DLP) and epidural dissection time. The secondary outcomes included technical success, complication rates, and pain scores at procedural time (VAS Time 0) and three months post-procedure (VAS Time 1). The statistical analyses included t-tests, Mann–Whitney U tests, and multiple regression. (3) Results: SIRIO-assisted procedures significantly reduced DLP (307.42 mGycm vs. 460.31 mGycm, p = 2.23 × 10−8) and procedural epidural dissection time (13.48 min vs. 32.26 min, p = 2.61 × 10−12) compared to non-SIRIO-assisted procedures. Multiple regression confirmed these reductions were significant (DLP: β = −162.38, p < 0.001; time: β = −18.25, p < 0.001). Pain scores (VAS Time 1) did not differ significantly between groups, and tumor type did not significantly influence outcomes. (4) Conclusions: The SIRIO system enhances neuroprotection efficacy and safety, reducing radiation dose and procedural time during spine tumoral ablation while maintaining consistent pain management outcomes. Full article
(This article belongs to the Special Issue 2nd Edition: Treatment of Bone Metastasis)
Show Figures

Figure 1

Figure 1
<p>Axial (<b>A</b>) image demonstrating a secondary osteolytic lesion from breast cancer located in the spinal process of D8. Sagittal (<b>B</b>) and axial (<b>C</b>) images showing epidural dissection with CO<sub>2</sub> and contrast medium.</p>
Full article ">Figure 2
<p>Axial images demonstrating the positioning of two probes in the spinal process of D8 (<b>A</b>) and the adjacent epidural dissection obtained (<b>B</b>).</p>
Full article ">Figure 3
<p>Comparison of SIRIO Assisted vs. non-SIRIO Assisted epidural dissections: (<b>A</b>): Comparison of Dose-Length Product (DLP) between SIRIO-assisted and non-SIRIO-assisted procedures. The boxplot shows significantly lower DLP values for SIRIO-assisted procedures, indicating reduced radiation exposure. (<b>B</b>): Comparison of Procedural Time between SIRIO-assisted and non-SIRIO-assisted procedures. The boxplot indicates that procedural time is significantly shorter for SIRIO-assisted procedures. (<b>C</b>): Comparison of Procedural Pain (VAS Time 0) between SIRIO-assisted and non-SIRIO-assisted procedures. The boxplot suggests no significant difference in immediate procedural pain between the two groups. (<b>D</b>): Comparison of Pain at Three Months (VAS Time 1) between SIRIO-assisted and non-SIRIO-assisted procedures. The boxplot shows no significant difference in pain reduction at three months post-procedure between the two groups.</p>
Full article ">Figure 4
<p>Impact of Predictors on DLP and Procedural Time. (<b>A</b>): Bar chart showing the impact of predictors (Age, Vertebroplasty Procedure, Tumor Type, SIRIO Assistance) on DLP. The SIRIO Assistance has the most significant negative impact on DLP. (<b>B</b>): Bar chart showing the impact of predictors (Age, Vertebroplasty Procedure, Tumor Type, SIRIO Assistance) on Procedural Time. SIRIO Assistance significantly reduces the procedural time.</p>
Full article ">Figure 5
<p>Relationship between Dimension of Lesion and VAS Time 1. (<b>A</b>): Scatter plot showing the relationship between the dimension of the treated lesion and the VAS score at three months post-procedure for SIRIO-assisted procedures. A positive correlation is observed, indicating that larger lesions tend to be associated with higher pain scores. (<b>B</b>): Scatter plot showing the relationship between the dimension of the treated lesion and the VAS score at three months post-procedure for non-SIRIO assisted procedures. A similar positive correlation is observed, suggesting that larger lesions are associated with higher pain scores in both groups.</p>
Full article ">Figure 6
<p>VAS Time 1 by Age Group for SIRIO Assisted and Non-SIRIO Assisted Procedures. (<b>A</b>): Boxplot showing the distribution of VAS Time 1 scores across different age groups for SIRIO-assisted procedures. No significant differences were found between the age groups. (<b>B</b>): Boxplot showing the distribution of VAS Time 1 scores across different age groups for non-SIRIO assisted procedures. Significant differences were found between the age groups, particularly between &lt;50 and 50–70, and &lt;50 and &gt;70.</p>
Full article ">Figure 7
<p>Axial (<b>A</b>) image demonstrating the presence of an osteoid osteoma located in adjacency to the inferior articular facet of D9. Axial (<b>B</b>) image demonstrating correct needle positioning and CO<sub>2</sub> epidural dissection.</p>
Full article ">
10 pages, 1315 KiB  
Article
Phytate Effects on Incomplete Distal Renal Tubular Acidosis
by Jordi Guimerà, Ana Martínez, José Luis Bauzá Quetglas, Pilar Sanchis, Antonia Costa-Bauzá, Enrique Pieras and Felix Grases
J. Clin. Med. 2024, 13(17), 5059; https://doi.org/10.3390/jcm13175059 - 26 Aug 2024
Viewed by 282
Abstract
Background: Adults who have incomplete distal renal tubular acidosis (dRTA) may present with recurrent urolithiasis due to metabolic acidosis, leading to bone resorption, which in turn causes hypercalciuria and urine alkalinization (pH > 6.0). Oral potassium citrate is the most commonly used treatment [...] Read more.
Background: Adults who have incomplete distal renal tubular acidosis (dRTA) may present with recurrent urolithiasis due to metabolic acidosis, leading to bone resorption, which in turn causes hypercalciuria and urine alkalinization (pH > 6.0). Oral potassium citrate is the most commonly used treatment for dRTA, but some patients cannot tolerate this treatment. The objective of this single-arm study was to evaluate the effect of phytate, an inhibitor of bone resorption, on calciuria of patients with incomplete dRTA. Methods: The calciuria levels of 16 patients who had incomplete dRTA with urolithiasis and could not tolerate potassium citrate treatment were recorded before (baseline) and after 6 months of treatment with oral calcium magnesium phytate (380 mg every 12 h). There were no dietary modifications or other treatments. Results: The baseline calciuria was 317 ± 81 mg/24 h and the level after 6 months was 221 ± 38 mg/24 h (p < 0.005). Conclusions: Our results suggest that calcium magnesium phytate should be considered as an alternative or adjunctive treatment for hypercalciuria in patients with incomplete dRTA. Full article
(This article belongs to the Section Nephrology & Urology)
Show Figures

Figure 1

Figure 1
<p>Calciuria before and after treatment with calcium magnesium phytate (InsP6). Values are expressed as mean ± SD. Values were compared using a paired-samples <span class="html-italic">t</span>-test. *: <span class="html-italic">p</span> &lt; 0.05 vs. before treatment.</p>
Full article ">Figure 2
<p>Absolute change (<b>A</b>) and percentage decrease (<b>B</b>) in calciuria after treatment with calcium magnesium phytate (InsP6) for all patients. Values are expressed as absolute change (Ca 0 months-Ca at 6 months) or percentage of change [(Ca 0 months − Ca at 6 months)/Ca at 0 months] × 100.</p>
Full article ">Figure 3
<p>Correlation between absolute change (<b>A</b>) and percentage decrease (<b>B</b>) in calciuria after treatment with calcium magnesium phytate (InsP6) with calciuria at baseline. The solid line is the line best fit. The dotted lines are its 95% confidence bands. Pearson correlation coefficient and <span class="html-italic">p</span>-value are indicated in the lower right corner.</p>
Full article ">
13 pages, 2396 KiB  
Article
P-Type ZnO Films Made by Atomic Layer Deposition and Ion Implantation
by Guoxiu Zhang, Lars Rebohle, Fabian Ganss, Wojciech Dawidowski, Elzbieta Guziewicz, Jung-Hyuk Koh, Manfred Helm, Shengqiang Zhou, Yufei Liu and Slawomir Prucnal
Nanomaterials 2024, 14(13), 1069; https://doi.org/10.3390/nano14131069 - 22 Jun 2024
Viewed by 781
Abstract
Zinc oxide (ZnO) is a wide bandgap semiconductor that holds significant potential for various applications. However, most of the native point defects in ZnO like Zn interstitials typically cause an n-type conductivity. Consequently, achieving p-type doping in ZnO is challenging but crucial for [...] Read more.
Zinc oxide (ZnO) is a wide bandgap semiconductor that holds significant potential for various applications. However, most of the native point defects in ZnO like Zn interstitials typically cause an n-type conductivity. Consequently, achieving p-type doping in ZnO is challenging but crucial for comprehensive applications in the field of optoelectronics. In this work, we investigated the electrical and optical properties of ex situ doped p-type ZnO films. The p-type conductivity has been realized by ion implantation of group V elements followed by rapid thermal annealing (RTA) for 60 s or flash lamp annealing (FLA) on the millisecond time scale in nitrogen or oxygen ambience. The phosphorus (P)-doped ZnO films exhibit stable p-type doping with a hole concentration in the range of 1014 to 1018 cm−3, while antimony (Sb) implantation produces only n-type layers independently of the annealing procedure. Microstructural studies of Sb-doped ZnO show the formation of metallic clusters after ms range annealing and SbZn-oxides after RTA. Full article
(This article belongs to the Special Issue Synthesis and Properties of Metal Oxide Thin Films)
Show Figures

Figure 1

Figure 1
<p>SRIM simulation of depth distribution of (<b>a</b>) phosphorus and (<b>b</b>) antimony in 100 nm ZnO film with high dose, respectively.</p>
Full article ">Figure 2
<p>RBS/R spectra of ZnO films grown by ALD at 200 °C and implanted with a high dose of Sb. After ion implantation samples were treated via different annealing methods. The inset shows a magnified signal from Sb.</p>
Full article ">Figure 3
<p>Raman spectra obtained from as-implanted ZnO films with (<b>a</b>) P ions and (<b>b</b>) Sb ions.</p>
Full article ">Figure 4
<p>Raman spectra of P-implanted and annealed samples treated with FLA (<b>a</b>) and RTA (<b>b</b>). Annealing was performed under a N<sub>2</sub> or O<sub>2</sub> atmosphere as indicated in the figures.</p>
Full article ">Figure 5
<p>Raman spectra of Sb-implanted samples grown at different temperatures and annealed either in a N<sub>2</sub> or in a O<sub>2</sub> atmosphere using FLA treatment (<b>a</b>) or RTA (<b>b</b>). The low-frequency part of the Raman spectra from (<b>a</b>) is shown separately at a different scale due to very intense peaks.</p>
Full article ">Figure 6
<p>XRD patterns of Sb-implanted samples grown at 130 °C and annealed either in a N<sub>2</sub> or in a O<sub>2</sub> atmosphere using FLA or RTA treatment.</p>
Full article ">Figure 7
<p>Room temperature PL spectra of (<b>a</b>) FLA-N<sub>2</sub>-treated, (<b>b</b>) FLA-O<sub>2</sub>-treated, (<b>c</b>) RTA-N<sub>2</sub>-treated, and (<b>d</b>) RTA-O<sub>2</sub>-treated PZO grown at 130 °C and 200 °C, and then implanted with different dopant doses, respectively. The insets in (<b>a</b>,<b>b</b>) show the PL spectra obtained from as-grown and as-implanted ZnO, respectively.</p>
Full article ">Figure 8
<p>Low-temperature PL spectra taken from un-doped ZnO and P- or Sb-doped samples. All samples were grown at 130 °C and subsequently annealed.</p>
Full article ">
16 pages, 2147 KiB  
Article
Long-Term Evaluation of the Shape of the Reconstructed Diaphragm in Patients with Left-Sided Congenital Diaphragmatic Hernia Using Serial Chest Radiographs and Correlation to Further Complications
by Christoph von Schrottenberg, Maren Lindacker, Meike Weis, Sylvia Büttner, Thomas Schaible, Michael Boettcher, Lucas M. Wessel and Katrin B. Zahn
J. Clin. Med. 2024, 13(2), 620; https://doi.org/10.3390/jcm13020620 - 22 Jan 2024
Cited by 1 | Viewed by 1045
Abstract
Background: Defining risk factors for long-term comorbidities in patients after neonatal repair of congenital diaphragmatic hernia (CDH) is an important cornerstone of the implementation of targeted longitudinal follow-up programs. Methods: This study systematically assessed serial chest radiographs of 89 patients with [...] Read more.
Background: Defining risk factors for long-term comorbidities in patients after neonatal repair of congenital diaphragmatic hernia (CDH) is an important cornerstone of the implementation of targeted longitudinal follow-up programs. Methods: This study systematically assessed serial chest radiographs of 89 patients with left-sided CDH throughout a mean follow-up of 8.2 years. These geometrical variables for the left and right side were recorded: diaphragmatic angle (LDA, RDA), diaphragmatic diameter (LDD, RDD), diaphragmatic height (LDH, RDH), diaphragmatic curvature index (LDCI, RDCI), lower lung diameter (LLLD, RLLD) and thoracic area (LTA, RTA). Results: It was demonstrated that the shape of the diaphragm in patients with large defects systematically differs from that of patients with small defects. Characteristically, patients with large defects present with a smaller LDCI (5.1 vs. 8.4, p < 0.001) at 6 months of age, which increases over time (11.4 vs. 7.0 at the age of 15.5 years, p = 0.727), representing a flattening of the patch and the attached rudimentary diaphragm as the child grows. Conclusions: Multiple variables during early follow-up were significantly associated with comorbidities such as recurrence, scoliotic curves of the spine and a reduced thoracic area. Some geometrical variables may serve as surrogate parameters for disease severity, which is associated with long-term comorbidities. Full article
Show Figures

Figure 1

Figure 1
<p>Chest radiograph of a 6-month-old patient after left-sided CDH repair with a cone-shaped patch in the neonatal period; measurements of the following variables are outlined (black line) and labeled on the patient’s right side (red arrows): (<b>a</b>) right and left diaphragmatic angle (RDA, LDA); (<b>b</b>) right and left diaphragmatic diameter (RDD, LDD), right and left diaphragmatic height (RDH, LDH) and right and left lower lung diameter (RLLD, LLLD); (<b>c</b>) right and left thoracic area (RTA, LTA).</p>
Full article ">Figure 2
<p>Chest radiograph of a 16-year-old patient after left-sided CDH repair with a cone-shaped patch in the neonatal period; measurements of the following variables are outlined (black line) and labeled on the patient’s right side (red arrows): (<b>a</b>) right and left diaphragmatic angle (RDA, LDA); (<b>b</b>) right and left diaphragmatic diameter (RDD, LDD), right and left diaphragmatic height (RDH, LDH) and right and left lower lung diameter (RLLD, LLLD); (<b>c</b>) right and left thoracic area (RTA, LTA).</p>
Full article ">Figure 3
<p>(<b>a</b>) right diaphragmatic angle (RDA), (<b>b</b>) left diaphragmatic angle (LDA), (<b>c</b>) right diaphragmatic diameter (RDD), (<b>d</b>) left diaphragmatic diameter (LDD), (<b>e</b>) right diaphragmatic height (RDH) and (<b>f</b>) left diaphragmatic height (LDH) in patients with small and large congenital diaphragmatic hernia defects at the ages of 6 ± 2 months, 12 ± 2 months, 24 ± 4 months, 3.5 ± 0.5 years, 6 ± 1 years, 10 ± 2 years and 15.5 ± 2.5 years during long-term follow-up; continuous lines represent mean values; dotted lines represent standard deviation; *, significant differences between patients with small and large defects are marked with an asterisk.</p>
Full article ">Figure 4
<p>(<b>a</b>) right diaphragmatic curvature index (RDCI), (<b>b</b>) left diaphragmatic curvature index (LDCI), (<b>c</b>) right lower lung diameter (RLLD), (<b>d</b>) left lower lung diameter (LLLD), (<b>e</b>) right thoracic area (RTA) and (<b>f</b>) left thoracic area (LTA) in patients with small and large congenital diaphragmatic hernia defects at the ages of 6 ± 2 months, 12 ± 2 months, 24 ± 4 months, 3.5 ± 0.5 years, 6 ± 1 years, 10 ± 2 years and 15.5 ± 2.5 years during long-term follow-up; continuous lines represent mean values; dotted lines represent standard deviation; *, significant differences between patients with small and large defects are marked with an asterisk.</p>
Full article ">
21 pages, 11551 KiB  
Article
Effect of Oxygen-Evaporation-Preventative Post-Annealing Gas Conditions on NiO Thin Films
by Hyungmin Kim, Kyunghwan Kim and Jeongsoo Hong
Coatings 2023, 13(11), 1954; https://doi.org/10.3390/coatings13111954 - 15 Nov 2023
Cited by 1 | Viewed by 1175
Abstract
In this study, NiO films were fabricated through radio frequency sputtering with various oxygen flow rates and processed via rapid thermal annealing under Ar, O2, and N2 atmospheres. The electrical, optical, and crystallographic properties of the NiO films were influenced [...] Read more.
In this study, NiO films were fabricated through radio frequency sputtering with various oxygen flow rates and processed via rapid thermal annealing under Ar, O2, and N2 atmospheres. The electrical, optical, and crystallographic properties of the NiO films were influenced by their oxygen content in each film. As the oxygen content, carrier concentration, and resistivity increased, transmittance and mobility decreased. The carrier mobility of the NiO film in the p-type layer of the photodetector requires improvement. Rapid thermal annealing (RTA) has been widely used to improve the crystallinity and mobility of films. However, the reduction in oxygen content during RTA causes a decrease in the carrier concentration and transmittance of NiO films. Regarding the aim of preventing a reduction in oxygen content in the NiO films due to the RTA process, an O2 atmosphere (compared with Ar and N2 atmospheres) was identified as the optimal condition for mobility (3.42 cm2/V·s) and transmittance (50%). Full article
(This article belongs to the Section Thin Films)
Show Figures

Figure 1

Figure 1
<p>Schematic of the sputtering system.</p>
Full article ">Figure 2
<p>Deposition rates of the NiO films at various oxygen flow rates.</p>
Full article ">Figure 3
<p>SEM images of the surface morphology of NiO films deposited via RF sputtering on a glass substrate at oxygen flow rates of (<b>a</b>) 0, (<b>b</b>) 2, (<b>c</b>) 4, (<b>d</b>) 6, (<b>e</b>) 8, and (<b>f</b>) 10 sccm. (<b>g</b>) Section of 50 nm NiO thin film fabricated with oxygen flow rate of 0 sccm.</p>
Full article ">Figure 3 Cont.
<p>SEM images of the surface morphology of NiO films deposited via RF sputtering on a glass substrate at oxygen flow rates of (<b>a</b>) 0, (<b>b</b>) 2, (<b>c</b>) 4, (<b>d</b>) 6, (<b>e</b>) 8, and (<b>f</b>) 10 sccm. (<b>g</b>) Section of 50 nm NiO thin film fabricated with oxygen flow rate of 0 sccm.</p>
Full article ">Figure 4
<p>AFM images of the surface morphology of NiO films deposited via RF sputtering on a glass substrate at oxygen flow rates of (<b>a</b>) 0, (<b>b</b>) 2, (<b>c</b>) 4, (<b>d</b>) 6, (<b>e</b>) 8, and (<b>f</b>) 10 sccm.</p>
Full article ">Figure 5
<p>XRD patterns of the 50 nm NiO films on a glass substrate with different oxygen flow rates.</p>
Full article ">Figure 6
<p>Transmittance of NiO films on a glass substrate using different oxygen flow rates.</p>
Full article ">Figure 7
<p>Optical band gap energy E<sub>g</sub> of the NiO film at (<b>a</b>) 0 sccm and (<b>b</b>) 10 sccm.</p>
Full article ">Figure 8
<p>Residual stress of NiO film with different oxygen flow rates measured via GIXRD (measured point and fitted linear graph of epsilon vs. sin<sup>2</sup>psi).</p>
Full article ">Figure 9
<p>Electrical properties of the NiO films deposited with various oxygen flow rates.</p>
Full article ">Figure 10
<p>The electrical properties of NiO films processed via RTA system under Ar, O<sub>2</sub>, and N<sub>2</sub> atmospheres.</p>
Full article ">Figure 11
<p>Transmittance of NiO films processed via RTA under Ar, O<sub>2</sub>, and N<sub>2</sub> atmospheres.</p>
Full article ">Figure 12
<p>The optical bandgap energy of NiO films processed via RTA under Ar, O<sub>2</sub>, and N<sub>2</sub> atmospheres. (<b>a</b>) with 0 sccm under Ar atmosphere; (<b>b</b>) with 0 sccm under O<sub>2</sub> atmosphere; (<b>c</b>) with 0 sccm under N<sub>2</sub> atmosphere; (<b>d</b>) with 10 sccm under Ar atmosphere; (<b>e</b>) with 10 sccm under O<sub>2</sub> atmosphere; (<b>f</b>) with 10 sccm under N<sub>2</sub> atmosphere.</p>
Full article ">Figure 13
<p>SEM images of the NiO films at different oxygen flow rates after 300 °C RTA. (<b>a</b>) 0 sccm, Ar; (<b>b</b>) 4 sccm, Ar; (<b>c</b>) 8 sccm, Ar; (<b>d</b>) 0 sccm, O<sub>2</sub>; (<b>e</b>) 4 sccm, O<sub>2</sub>; (<b>f</b>) 8 sccm, O<sub>2</sub>; (<b>g</b>) 0 sccm, N<sub>2</sub>; (<b>h</b>) 4 sccm, N<sub>2</sub>, and (<b>i</b>) 8 sccm, N<sub>2</sub>.</p>
Full article ">Figure 13 Cont.
<p>SEM images of the NiO films at different oxygen flow rates after 300 °C RTA. (<b>a</b>) 0 sccm, Ar; (<b>b</b>) 4 sccm, Ar; (<b>c</b>) 8 sccm, Ar; (<b>d</b>) 0 sccm, O<sub>2</sub>; (<b>e</b>) 4 sccm, O<sub>2</sub>; (<b>f</b>) 8 sccm, O<sub>2</sub>; (<b>g</b>) 0 sccm, N<sub>2</sub>; (<b>h</b>) 4 sccm, N<sub>2</sub>, and (<b>i</b>) 8 sccm, N<sub>2</sub>.</p>
Full article ">Figure 14
<p>The XRD images of NiO films fabricated using 0, 4, and 8 sccm oxygen flow rates after RTA processes under Ar, N<sub>2</sub>, and O<sub>2</sub> atmospheres.</p>
Full article ">Figure 15
<p>(<b>a</b>) Peaks of as-fabricated NiO films deposited at 8 sccm oxygen flow rate obtained via XPS measurement (the Ni 2p and O 1s spectra of NiO films); (<b>b</b>) C 1s, as-fabricated; (<b>c</b>) Ni 2p, as-fabricated; (<b>d</b>) O 1s, as-fabricated; (<b>e</b>) Ni 2p, RTA: Ar; (<b>f</b>) O 1s, RTA: Ar; (<b>g</b>) Ni 2p, RTA: O<sub>2</sub>; (<b>h</b>) O 1s, RTA: O<sub>2</sub>; (<b>i</b>) Ni 2p, RTA: N<sub>2</sub>; (<b>j</b>) O 1s, RTA: N<sub>2</sub>.</p>
Full article ">Figure 15 Cont.
<p>(<b>a</b>) Peaks of as-fabricated NiO films deposited at 8 sccm oxygen flow rate obtained via XPS measurement (the Ni 2p and O 1s spectra of NiO films); (<b>b</b>) C 1s, as-fabricated; (<b>c</b>) Ni 2p, as-fabricated; (<b>d</b>) O 1s, as-fabricated; (<b>e</b>) Ni 2p, RTA: Ar; (<b>f</b>) O 1s, RTA: Ar; (<b>g</b>) Ni 2p, RTA: O<sub>2</sub>; (<b>h</b>) O 1s, RTA: O<sub>2</sub>; (<b>i</b>) Ni 2p, RTA: N<sub>2</sub>; (<b>j</b>) O 1s, RTA: N<sub>2</sub>.</p>
Full article ">
12 pages, 285 KiB  
Article
Risk Profile of Patients with Brushite Stone Disease and the Impact of Diet
by Roswitha Siener, Maria Sofie Pitzer, Jan Speller and Albrecht Hesse
Nutrients 2023, 15(18), 4092; https://doi.org/10.3390/nu15184092 - 21 Sep 2023
Cited by 2 | Viewed by 4130
Abstract
This study examined the profile of patients and the impact of diet on the risk of brushite stone formation under controlled, standardized conditions. Sixty-five patients with brushite nephrolithiasis were enrolled in the study. Metabolic, dietary, and 24 h urinary parameters were collected under [...] Read more.
This study examined the profile of patients and the impact of diet on the risk of brushite stone formation under controlled, standardized conditions. Sixty-five patients with brushite nephrolithiasis were enrolled in the study. Metabolic, dietary, and 24 h urinary parameters were collected under the habitual, self-selected diet of the patients and the balanced mixed, standardized diet. The [13C2]oxalate absorption, ammonium chloride, and calcium loading tests were conducted. All patients had at least one abnormality on the usual diet, with hypercalciuria (84.6%), increased urine pH (61.5%), and hyperphosphaturia (43.1%) being the most common. Absorptive hypercalciuria was present in 32.1% and hyperabsorption of oxalate in 41.2%, while distal renal tubular acidosis (dRTA) was noted in 50% of brushite stone formers. The relative supersaturation of brushite did not differ between patients with and without dRTA. Among all recent brushite-containing calculi, 61.5% were mixed with calcium oxalate and/or carbonate apatite. The relative supersaturation of brushite, apatite, and calcium oxalate decreased significantly under the balanced diet, mainly due to the significant decline in urinary calcium, phosphate, and oxalate excretion. Dietary intervention was shown to be effective and should be an integral part of the treatment of brushite stone disease. Further research on the role of dRTA in brushite stone formation is needed. Full article
(This article belongs to the Section Clinical Nutrition)
13 pages, 3003 KiB  
Article
Ocular Findings in Patients with Orbital Fractures: A 1-Year Prospective Study in a Tertiary Center
by Mohammed Asiri and Omir Aldowah
Medicina 2023, 59(6), 1091; https://doi.org/10.3390/medicina59061091 - 5 Jun 2023
Cited by 2 | Viewed by 1713
Abstract
Background and Objectives: The aim of this study was to study the prevalence of ocular findings in patients with orbital fractures in a tertiary center in Saudi Arabia. Materials and methods: A cross-sectional observational study was performed. The participants were patients who presented with [...] Read more.
Background and Objectives: The aim of this study was to study the prevalence of ocular findings in patients with orbital fractures in a tertiary center in Saudi Arabia. Materials and methods: A cross-sectional observational study was performed. The participants were patients who presented with orbital trauma to the emergency department of King Saud Medical City (Riyadh, Saudi Arabia). Subjects included those diagnosed with isolated orbital fracture using clinical evaluation and CT examination. We performed direct evaluation of ocular findings for all patients. Variables studied included age, gender, site of ocular fracture, cause of trauma, side of fracture, and ocular findings. Results: In total, 74 patients with orbital fractures were included in this study (n = 74). Of the 74 patients, 69 (93.2%) were males and only 5 patients (6.8%) were females. The age range was 8-70 years, with a median age of 27 years. The 27.5–32.6-year age group was the most affected (95.0%). The left orbital bone was involved in the majority of bone fractures 48 (64.9%). The orbital floor (n = 52, 41.9%) and lateral wall (n = 31, 25.0%) were the most prevalent sites of bone fracture among the study patients. Road traffic accidents (RTAs) were the most common causes (64.9%) of orbital fractures, followed by assaults (16.2%) and then sports injuries and falls (9.5% and 8.1%, respectively). Animal attacks were the least cause of trauma (only 1 patient, 1.4%). The occurrence of ocular findings, either alone or in combination, showed that subconjunctival hemorrhage had the highest percentage (52.0%), followed by edema (17.6%) and ecchymosis (13.6%). A statistically significant correlation was reported between the site of bone fracture and orbital findings, with r = 0.251 * and p < 0.05. Conclusions: Subconjunctival bleeding, edema, and ecchymosis were the most frequent ocular abnormalities, in that order. There were a few instances of diplopia, exophthalmos, and paresthesia. Other ocular discoveries were incredibly uncommon. The location of bone fractures was found to be significantly correlated with ocular results. Full article
(This article belongs to the Section Ophthalmology)
Show Figures

Figure 1

Figure 1
<p>Sites of bone fracture.</p>
Full article ">Figure 2
<p>Cone-beam computed tomography (CBCT) of orbital floor fracture.</p>
Full article ">Figure 3
<p>CBCT of left infraorbital rim fracture.</p>
Full article ">Figure 4
<p>Orbital floor fracture with entrapment of the inferior rectus muscle; patients present with vertical gaze diplopia and restriction of upgaze.</p>
Full article ">Figure 5
<p>Causes of trauma.</p>
Full article ">Figure 6
<p>Entrapment of infraorbital muscle with ecchymosis, left eye.</p>
Full article ">Figure 7
<p>Ruptured globe, left eye.</p>
Full article ">Figure 8
<p>Cause of trauma with regard to subconjunctival hemorrhage.</p>
Full article ">
13 pages, 2878 KiB  
Article
Suppressing Kaposi’s Sarcoma-Associated Herpesvirus Lytic Gene Expression and Replication by RNase P Ribozyme
by Yujun Liu, Yuan-Chuan Chen, Bin Yan and Fenyong Liu
Molecules 2023, 28(8), 3619; https://doi.org/10.3390/molecules28083619 - 21 Apr 2023
Cited by 2 | Viewed by 1442
Abstract
Kaposi’s sarcoma, an AIDS-defining illness, is caused by Kaposi’s sarcoma-associated herpesvirus (KSHV), an oncogenic virus. In this study, we engineered ribozymes derived from ribonuclease P (RNase P) catalytic RNA with targeting against the mRNA encoding KSHV immediate early replication and transcription activator (RTA), [...] Read more.
Kaposi’s sarcoma, an AIDS-defining illness, is caused by Kaposi’s sarcoma-associated herpesvirus (KSHV), an oncogenic virus. In this study, we engineered ribozymes derived from ribonuclease P (RNase P) catalytic RNA with targeting against the mRNA encoding KSHV immediate early replication and transcription activator (RTA), which is vital for KSHV gene expression. The functional ribozyme F-RTA efficiently sliced the RTA mRNA sequence in vitro. In cells, KSHV production was suppressed with ribozyme F-RTA expression by 250-fold, and RTA expression was suppressed by 92–94%. In contrast, expression of control ribozymes hardly affected RTA expression or viral production. Further studies revealed both overall KSHV early and late gene expression and viral growth decreased because of F-RTA-facilitated suppression of RTA expression. Our results indicate the first instance of RNase P ribozymes having potential for use in anti-KSHV therapy. Full article
(This article belongs to the Section Medicinal Chemistry)
Show Figures

Figure 1

Figure 1
<p>(<b>A</b>,<b>B</b>) Substrates for RNase P and M1 RNA. (<b>C</b>) Substrate for M1GS ribozyme. (<b>D</b>) rta39 substrate in this study. (<b>E</b>) The mutated positions in ribozyme C-RTA (circled and in red), compared to F-RTA, shown in the secondary structure of M1 RNA [<a href="#B13-molecules-28-03619" class="html-bibr">13</a>,<a href="#B14-molecules-28-03619" class="html-bibr">14</a>]. The cleavage site is marked by an arrow.</p>
Full article ">Figure 2
<p>Northern blot analysis of cellular ribozyme expression. RNAs (30 µg) from BCBL-1 cells transfected with empty LXSN vector with no ribozyme sequences (-) and cells with different ribozymes (F-RTA, C-RTA, and M1-TK) were hybridized with probes against human H1 RNA (loading control) (lanes 1–4) and M1GS RNAs (lanes 5–8).</p>
Full article ">Figure 3
<p>Expression of viral RNAs detected by Northern blot analysis. RNAs (40 µg) from BCBL-1 cells with no ribozyme sequences (-) and cells with different ribozymes (F-RTA, C-RTA, and M1-TK) were hybridized with probes for actin mRNA (lanes 1–4), RTA mRNA (lanes 5–8), PAN RNA (lanes 9–12), and ORF75 mRNA (lanes 13–16).</p>
Full article ">Figure 4
<p>Expression of KSHV proteins detected by Western blot analysis. Proteins (35 µg) from BCBL-1 cells with no ribozyme sequences (-) and cells with different ribozymes (F-RTA, C-RTA, and M1-TK) were allowed to bind to antibodies specifically against human actin (loading control), RTA protein, ORF59 protein, and ORF26 protein.</p>
Full article ">Figure 5
<p>Levels of KSHV DNAs in supernatants of the cell cultures by qPCR. DNAs were purified from supernatants of cell cultures treated with or without TPA and collected at different time points. We employed qPCR to determine viral DNA levels, following procedures described in Materials and Methods. The values show the increase in virion DNA level in the samples, compared to that of virion DNA level in BCBL-1 cells with empty pLXSN vector in the absence of TPA (BCBL-1 no TPA). The averages of three independent experiments are shown and bars indicate the standard deviations.</p>
Full article ">Figure 6
<p>KSHV latent genome DNA levels in cells by qPCR. We harvested DNA samples from cells without TPA induction and performed qPCR assays. The values show the relative percentage of viral genome DNA levels in samples, as compared with the level of KSHV genome DNA in the BCBL-1 cells transfected with empty pLXSN vector and no ribozyme sequence (BCBL-1). The averages of three independent experiments are shown and bars indicate the standard deviations. NS, not significant.</p>
Full article ">
16 pages, 6226 KiB  
Article
Characterization of a PIP Binding Site in the N-Terminal Domain of V-ATPase a4 and Its Role in Plasma Membrane Association
by Anh Chu, Yeqi Yao, Golam T. Saffi, Ji Hyun Chung, Roberto J. Botelho, Miroslawa Glibowicka, Charles M. Deber and Morris F. Manolson
Int. J. Mol. Sci. 2023, 24(5), 4867; https://doi.org/10.3390/ijms24054867 - 2 Mar 2023
Cited by 2 | Viewed by 2213
Abstract
Vacuolar ATPases (V-ATPases) are multi-subunit ATP-dependent proton pumps necessary for cellular functions, including pH regulation and membrane fusion. The evidence suggests that the V-ATPase a-subunit’s interaction with the membrane signaling lipid phosphatidylinositol (PIPs) regulates the recruitment of V-ATPase complexes to specific membranes. We [...] Read more.
Vacuolar ATPases (V-ATPases) are multi-subunit ATP-dependent proton pumps necessary for cellular functions, including pH regulation and membrane fusion. The evidence suggests that the V-ATPase a-subunit’s interaction with the membrane signaling lipid phosphatidylinositol (PIPs) regulates the recruitment of V-ATPase complexes to specific membranes. We generated a homology model of the N-terminal domain of the human a4 isoform (a4NT) using Phyre2.0 and propose a lipid binding domain within the distal lobe of the a4NT. We identified a basic motif, K234IKK237, critical for interaction with phosphoinositides (PIP), and found similar basic residue motifs in all four mammalian and both yeast a-isoforms. We tested PIP binding of wildtype and mutant a4NT in vitro. In protein lipid overlay assays, the double mutation K234A/K237A and the autosomal recessive distal renal tubular-causing mutation K237del reduced both PIP binding and association with liposomes enriched with PI(4,5)P2, a PIP enriched within plasma membranes. Circular dichroism spectra of the mutant protein were comparable to wildtype, indicating that mutations affected lipid binding, not protein structure. When expressed in HEK293, wildtype a4NT localized to the plasma membrane in fluorescence microscopy and co-purified with the microsomal membrane fraction in cellular fractionation experiments. a4NT mutants showed reduced membrane association and decreased plasma membrane localization. Depletion of PI(4,5)P2 by ionomycin caused reduced membrane association of the WT a4NT protein. Our data suggest that information contained within the soluble a4NT is sufficient for membrane association and that PI(4,5)P2 binding capacity is involved in a4 V-ATPase plasma membrane retention. Full article
(This article belongs to the Special Issue Biochemistry, Molecular Biology and Druggability of Proteins)
Show Figures

Figure 1

Figure 1
<p>Homology model of a4NT reveals a putative lipid binding motif K<sup>234</sup>IKK<sup>237</sup>. (<b>A</b>) Homology model of the N-terminus of the a4 isoform was constructed using Phyre2.0. 32% i.d with <span class="html-italic">S. cerevisiae</span> V-ATPase state 1 Vph1p-NT (PDB: 3j9t.b). Inset: the putative phosphoinositide binding domain consists of three parallel β-strands and two α-helices. Highlighted in green is the conserved binding motif K<sup>234</sup>IKK<sup>237</sup>. (<b>B</b>) Fitting of the a4NT model (red) in the place of Vph1 N-terminal domain in the available cryo-EM generated structure of <span class="html-italic">S. cerevisae</span> V-ATPase (PDB: 3j9t) (cyan), with the PIP binding motif highlighted in green, and the side chain of two residues, K234 and K237, is shown to implicate the plasma membrane access (inset: enlarged view) (red: a4NT, cyan: <span class="html-italic">S. cerevisae</span> V-ATPase, green: key residues).</p>
Full article ">Figure 2
<p>(<b>A</b>) PIP-binding motif (K/R)X(K/R)K is found within all four <span class="html-italic">a</span> isoforms. Sequence alignment of the N-terminal domains of the yeast Vph1p, Stv1p and human a1–a4. Highlighted in green is the binding motif (K/R)X(K/R)K. (<b>B</b>) Double mutation K234A/K237A and human dRTA mutation K237del show reduced PIP binding in protein–lipid overlay assay. Protein–phosphoinositide overlay assay of the cytoplasmic N-terminal domain of a4 WT and mutants (12 μg of proteins) with a PIPs array containing the dilution series of the indicated phosphoinositides (50, 25 and 12.5 pmol). (<b>C</b>) Quantification of overlay assay. Data represent mean ± S.D. of the signal intensity for 25 pmol of PIPs (normalized to total bound protein of the blots) from three independent experiments. Statistical significance was analyzed by one-way ANOVA with Dunnett’s multiple comparisons test. * Indicates <span class="html-italic">p</span> &lt; 0.05, ** indicates <span class="html-italic">p</span> &lt; 0.01, *** indicates <span class="html-italic">p</span> &lt; 0.001, **** indicates <span class="html-italic">p</span> &lt; 0.0001. (<b>D</b>) Mutations do not affect protein secondary structure. Circular dichroism (CD) spectra of a4NT wildtype (black) and mutant K234A/K237A (blue) in 50 mM Tris pH 8.0, and in addition of 10 mM SDS (wildtype: green; mutant: red).</p>
Full article ">Figure 3
<p>Mutation within the putative a4 PIP binding motif reduced interactions with PI(4,5)P<sub>2</sub>-enriched liposomes. (<b>A</b>) Liposome pull-down assay with PolyPIPosomes (Echelon) enriched with PI(3,4)P<sub>2</sub>, PI(4,5)P<sub>2</sub> and PI(3,4,5)P<sub>3</sub> of the WT and double mutant K234A/K237A. In total, 30 μg proteins (wildtype and mutant) was incubated for 1 h at room temperature with 20 μL of 1 mM PolyPIPosomes containing 5% of the PIP in binding buffer (50 mM Tris, pH 7.5, 150 mM NaCl, 0.05% Nonidet P-40). A total 5 μg of purified proteins was input as loading control. Quantification: Relative signal intensity of the proteins (WT, double mutants) pulled down with indicated liposomes to input. Data represent mean ± S.D. from three independent experiments. Pair <span class="html-italic">t</span>-tests were run to analyze the significance in mean difference. ** indicates <span class="html-italic">p</span> &lt; 0.01. (<b>B</b>) Liposome pull-down assay with PI(4,5)P<sub>2</sub>-enriched PolyPIPosome with WT and K234A/K237A and K237del mutants. Quantification: relative intensity of the proteins pulled down with PI(4,5)P2-enriched liposome to input. Data represent mean ± S.D. from three independent experiments. Statistical significance was analyzed by one-way ANOVA with Dunnett’s multiple comparisons test comparing mutants to WT. ** indicates <span class="html-italic">p</span> &lt; 0.01, *** indicates <span class="html-italic">p</span> &lt; 0.001. (<b>C</b>) Liposome pull-down assay with PI(4)P-enriched PolyPIPosome with WT and K237del mutant. Quantification: relative intensity of the proteins pulled down with the liposome to input (30 ng). Data represent mean ± S.D. from five independent experiments.</p>
Full article ">Figure 3 Cont.
<p>Mutation within the putative a4 PIP binding motif reduced interactions with PI(4,5)P<sub>2</sub>-enriched liposomes. (<b>A</b>) Liposome pull-down assay with PolyPIPosomes (Echelon) enriched with PI(3,4)P<sub>2</sub>, PI(4,5)P<sub>2</sub> and PI(3,4,5)P<sub>3</sub> of the WT and double mutant K234A/K237A. In total, 30 μg proteins (wildtype and mutant) was incubated for 1 h at room temperature with 20 μL of 1 mM PolyPIPosomes containing 5% of the PIP in binding buffer (50 mM Tris, pH 7.5, 150 mM NaCl, 0.05% Nonidet P-40). A total 5 μg of purified proteins was input as loading control. Quantification: Relative signal intensity of the proteins (WT, double mutants) pulled down with indicated liposomes to input. Data represent mean ± S.D. from three independent experiments. Pair <span class="html-italic">t</span>-tests were run to analyze the significance in mean difference. ** indicates <span class="html-italic">p</span> &lt; 0.01. (<b>B</b>) Liposome pull-down assay with PI(4,5)P<sub>2</sub>-enriched PolyPIPosome with WT and K234A/K237A and K237del mutants. Quantification: relative intensity of the proteins pulled down with PI(4,5)P2-enriched liposome to input. Data represent mean ± S.D. from three independent experiments. Statistical significance was analyzed by one-way ANOVA with Dunnett’s multiple comparisons test comparing mutants to WT. ** indicates <span class="html-italic">p</span> &lt; 0.01, *** indicates <span class="html-italic">p</span> &lt; 0.001. (<b>C</b>) Liposome pull-down assay with PI(4)P-enriched PolyPIPosome with WT and K237del mutant. Quantification: relative intensity of the proteins pulled down with the liposome to input (30 ng). Data represent mean ± S.D. from five independent experiments.</p>
Full article ">Figure 4
<p>Mutation K234A/K237A and K237del reduced a4NT in microsomal fractions. (<b>A</b>) a4NT-WT co-purified with microsomal membrane while mutants a4NT-K234A/K237A and K237del reduced membrane association. Plasmids containing <span class="html-italic">a4</span>NT wildtype (WT) and mutants K234A/K237A and K237del were transfected in HEK293 cells. Cells were harvested after 30 h. Whole-cell extracts (WC) were centrifuged at 48,000 rpm to obtain cytosolic fraction (cytosol) and microsomal fraction (microsomal). (<b>B</b>) Quantification. Relative pixel intensity of microsomal fraction (WT microsomal = 1). Data represent mean ± S.D. from three independent experiments. Statistical significance was analyzed by one-way ANOVA with Dunnett’s multiple comparisons test comparing mutants to WT. *** indicates <span class="html-italic">p</span> &lt; 0.001.</p>
Full article ">Figure 5
<p>Mutation K234A/K237A and K237del reduced plasma-membrane-associated a4NT. (<b>A</b>) Plasmids containing FLAG-tagged a4NT wildtype (WT), mutants K234A/K237A and K237del were transfected in HEK293 cells. Cells were fixed and stained for membrane marker Alexa-647 conjugated wheat germ agglutinin (WGA) (red), followed by permeabilization and staining for FLAG-tagged proteins (green). White arrows indicate regions of plasma membrane localization. The scale bar represents 10 μm (inset at the top panel is enlarged area of colocalization). (<b>B</b>) Quantification of the green signal intensity at the vicinity of the plasma membrane (red). Data represent mean value of at least 20 cells assessed ± SEM from three independent experiments. Statistical significance was analyzed by one-way ANOVA with Dunnett’s multiple comparisons test comparing mutants to WT. ** indicates <span class="html-italic">p</span> &lt; 0.01, *** indicates <span class="html-italic">p</span> &lt; 0.001.</p>
Full article ">Figure 6
<p>Ionomycin reduces a4NT-membrane association in vivo. (<b>A</b>) Plasmids containing FLAG-tagged a4NT wildtype (WT) were transfected in HEK293 cells. Cells were treated with 5 µM of ionomycin at room temperature for 15 min before harvest. Cells were fixed and permeabilized, then stained for membrane marker anti-Na<sup>+</sup>/K<sup>+</sup>-ATPase with Alexa Fluor 488 (green), followed by staining for FLAG-tagged proteins (red). White arrows represent regions of plasma membrane localization. Images are representatives of 20 cells each from 4 experiments. The scale bar represents 10 μm (inset at the right panel is enlarged area of colocalization). (<b>B</b>) Quantification. Relative intensity of the red signal overlapping with the green signal to the total red signal. Data represent mean value of at least 20 cells assessed ±SEM from 4 independent experiments. A pair <span class="html-italic">t</span>-test was run to analyze the significance in mean difference. ** indicates <span class="html-italic">p</span> &lt; 0.001. (<b>C</b>) Treatment with ionomycin causes depletion of membrane PI(4,5)P<sub>2</sub>, resulting in mislocalization of PH-PLC. Plasmids containing GFP-tagged PH-PLC were transfected in HEK293 cells. Cells were treated with 5 µM of ionomycin at room temperature for 15 min before harvest. Cells were fixed and permeabilized, then stained for membrane marker anti-Na<sup>+</sup>/K<sup>+</sup>-ATPase with Alexa Fluor 568 (red). Quantification of the resulting immunofluorescent images were performed by measuring the relative intensity of the red signal overlapping with the green signal to the total red signal. Data represent mean value of at least 20 cells assessed ±SEM from 3 independent experiments. A pair <span class="html-italic">t</span>-test was run to analyze the significance in mean difference. * indicates <span class="html-italic">p</span> &lt; 0.05.</p>
Full article ">Figure 6 Cont.
<p>Ionomycin reduces a4NT-membrane association in vivo. (<b>A</b>) Plasmids containing FLAG-tagged a4NT wildtype (WT) were transfected in HEK293 cells. Cells were treated with 5 µM of ionomycin at room temperature for 15 min before harvest. Cells were fixed and permeabilized, then stained for membrane marker anti-Na<sup>+</sup>/K<sup>+</sup>-ATPase with Alexa Fluor 488 (green), followed by staining for FLAG-tagged proteins (red). White arrows represent regions of plasma membrane localization. Images are representatives of 20 cells each from 4 experiments. The scale bar represents 10 μm (inset at the right panel is enlarged area of colocalization). (<b>B</b>) Quantification. Relative intensity of the red signal overlapping with the green signal to the total red signal. Data represent mean value of at least 20 cells assessed ±SEM from 4 independent experiments. A pair <span class="html-italic">t</span>-test was run to analyze the significance in mean difference. ** indicates <span class="html-italic">p</span> &lt; 0.001. (<b>C</b>) Treatment with ionomycin causes depletion of membrane PI(4,5)P<sub>2</sub>, resulting in mislocalization of PH-PLC. Plasmids containing GFP-tagged PH-PLC were transfected in HEK293 cells. Cells were treated with 5 µM of ionomycin at room temperature for 15 min before harvest. Cells were fixed and permeabilized, then stained for membrane marker anti-Na<sup>+</sup>/K<sup>+</sup>-ATPase with Alexa Fluor 568 (red). Quantification of the resulting immunofluorescent images were performed by measuring the relative intensity of the red signal overlapping with the green signal to the total red signal. Data represent mean value of at least 20 cells assessed ±SEM from 3 independent experiments. A pair <span class="html-italic">t</span>-test was run to analyze the significance in mean difference. * indicates <span class="html-italic">p</span> &lt; 0.05.</p>
Full article ">
23 pages, 6031 KiB  
Article
Information and Entropy Aspects of the Specifics of Regional Road Traffic Accident Rate in Russia
by Artur I. Petrov
Information 2023, 14(2), 138; https://doi.org/10.3390/info14020138 - 20 Feb 2023
Cited by 4 | Viewed by 2462
Abstract
The aim of this research is to study the specifics of the road accident rate formation processes in regions of the Russian Federation (2021) using information-entropic analysis. The typical research approaches (correlation-regression, factorial analyses, simulation modelling, etc.) do not always allow us to [...] Read more.
The aim of this research is to study the specifics of the road accident rate formation processes in regions of the Russian Federation (2021) using information-entropic analysis. The typical research approaches (correlation-regression, factorial analyses, simulation modelling, etc.) do not always allow us to identify its specificity. It is impossible to evaluate the quality of the researched process’s structure using these methods. However, this knowledge is required to understand the distinctions between high-quality road safety management and its opposite. In order to achieve the goal of the research methodology based on the use of the classical approaches of C. Shannon, the quantitative value of information entropy H was elaborated. The key components of this method are the modelling of the cause-and-effect chain of road accident rate formation and the consideration of the relative significances of individual blocks of the process in achieving the final result. During the research the required statistical data were collected and the structure of the road accident rate formation process in 82 regions of the Russian Federation in the format “Population P—Fleet of vehicles NVh—Road Traffic Accidents NRA—RTA Victims NV—Fatality Cases ND” was analyzed. The fact that the structure of the road accident rate formation process is extremely specific in different Russian regions was shown. Exactly this specificity forms the degree of ambiguity in the state of Russian regional road safety provision systems in terms of the probability of death in road accidents. The main conclusion of this research is that information-entropic analysis can be successfully used to assess the structural quality of road safety systems. Full article
Show Figures

Figure 1

Figure 1
<p>Simplest example of the distribution of entropy values <span class="html-italic">H</span> for a two-component system (components [+] and [−]). In the case of equal weights of two components of the system (when <span class="html-italic">w</span>(+) = <span class="html-italic">w</span>(−)) the entropy of the system <span class="html-italic">H</span> = 1.0.</p>
Full article ">Figure 2
<p>Simplest cause–effect chain of the process of the road traffic accident rate formation.</p>
Full article ">Figure 3
<p>Correlation matrix of the relation between the blocks of the cause–effect chain of the process of the road traffic accident rate formation (2021) in 82 regions of the Russian Federation (excluding cities of federal significance).</p>
Full article ">Figure 4
<p>Characteristics of the road traffic accident rate as a result of informational relation between the blocks of the cause–effect chain of formation of the road traffic accident rate.</p>
Full article ">Figure 5
<p>Correlation matrix of the relation of four characteristics of the road traffic accident rate in the regions of Russia (2021).</p>
Full article ">Figure 6
<p>Four characteristics that determine the specifics of the information process of the functioning of the regional transport system.</p>
Full article ">Figure 7
<p>Statistical distributions of regional values of characteristics that determine the specifics of the information process of the functioning of the regional transport system. (<b>a</b>) Automobilization <span class="html-italic">A</span>; (<b>b</b>) RTA Probability <span class="html-italic">P <sub>RTA</sub></span>; (<b>c</b>) RTA Significance <span class="html-italic">Sign <sub>RTA</sub></span>; (<b>d</b>) RTA Severity <span class="html-italic">Sv <sub>RTA</sub></span>.</p>
Full article ">Figure 7 Cont.
<p>Statistical distributions of regional values of characteristics that determine the specifics of the information process of the functioning of the regional transport system. (<b>a</b>) Automobilization <span class="html-italic">A</span>; (<b>b</b>) RTA Probability <span class="html-italic">P <sub>RTA</sub></span>; (<b>c</b>) RTA Significance <span class="html-italic">Sign <sub>RTA</sub></span>; (<b>d</b>) RTA Severity <span class="html-italic">Sv <sub>RTA</sub></span>.</p>
Full article ">Figure 8
<p>Correlation matrix of the relationships between four coefficients of information transformation <span class="html-italic">K<sub>i</sub></span> of the cause–effect chain for the regions of Russia (2021).</p>
Full article ">Figure 9
<p>Population density in Russia (2021).</p>
Full article ">Figure 10
<p>Statistical distributions of values of coefficients of information transformation K<sub>i</sub> (2021).</p>
Full article ">
16 pages, 1928 KiB  
Article
Physicochemical Stability of Generic Thiotepa Concentrate and Ready-to-Administer Infusion Solutions for Conditioning Treatment
by Helen Linxweiler, Judith Thiesen and Irene Krämer
Pharmaceutics 2023, 15(2), 309; https://doi.org/10.3390/pharmaceutics15020309 - 17 Jan 2023
Cited by 1 | Viewed by 2307
Abstract
The objective of this study was to determine the physicochemical in-use stability of recently approved Thiotepa Riemser concentrate in the original vial and diluted ready-to-administer (RTA) infusion solutions in prefilled glucose 5% and 0.9% NaCl polyolefin bags. Thiotepa Riemser 10 mg/mL concentrates and [...] Read more.
The objective of this study was to determine the physicochemical in-use stability of recently approved Thiotepa Riemser concentrate in the original vial and diluted ready-to-administer (RTA) infusion solutions in prefilled glucose 5% and 0.9% NaCl polyolefin bags. Thiotepa Riemser 10 mg/mL concentrates and infusion solutions (1 mg/mL, 2 mg/mL, 3 mg/mL) were prepared in triplicate and stored at 2–8 °C or 25 °C for 14 days. Thiotepa concentrations were determined using a stability-indicating RP-HPLC assay. In parallel, pH and osmolality were measured. Sub-visible particles were counted on day 0 and 14. Thiotepa Riemser concentrate was revealed to be stable for 14 days when stored at 2–8 °C, or for 24 h when stored at 25 °C. Thiotepa concentrations in infusion solutions stored at 2–8 °C remained above 95% of the initial concentrations for at least 14 days, regardless of the type of vehicle solution. When stored at 25 °C, thiotepa infusion solutions in glucose 5% proved to be physicochemically stable for 3 days (1 mg/mL), 5 days (2 mg/mL) or 7 days (3 mg/mL). Thiotepa infusion solutions in 0.9% NaCl remained physicochemically stable for 5 days (1 mg/mL) or 7 days (2 mg/mL, 3 mg/mL). At these points in time, the specification limit of ≤0.6% monochloro-adduct was fulfilled. In parallel, an elevation of the pH values was registered. Thiotepa concentrates and infusion solutions should be stored at 2–8 °C due to temperature-dependent physicochemical stability, and for microbiological reasons. Glucose 5% infusion solution is recommended as a diluent, and stability-improving nominal 2 mg/mL to 3 mg/mL thiotepa concentrations should be obtained. Full article
(This article belongs to the Section Biopharmaceutics)
Show Figures

Figure 1

Figure 1
<p>Degradation scheme of thiotepa in the absence and presence of sodium chloride, adapted from van Maanen et al. [<a href="#B7-pharmaceutics-15-00309" class="html-bibr">7</a>].</p>
Full article ">Figure 2
<p>HPLC chromatograms of thiotepa in water without degradation (<b>a</b>), heat-degraded (<b>b</b>), acidic and heat-degraded (<b>c</b>) alkaline and heat-degraded (<b>d</b>).</p>
Full article ">Figure 3
<p>HPLC chromatogram of thiotepa 10 mg/mL concentrate after 14 days storage at 25 °C.</p>
Full article ">Figure 4
<p>HPLC chromatogram of thiotepa 1 mg/mL infusion diluted with G5 infusion solution and stored at 25 °C for 14 days.</p>
Full article ">Figure 5
<p>HPLC chromatogram of thiotepa 1 mg/mL infusion diluted with 0.9% NaCl solution stored at 25 °C for 14 days.</p>
Full article ">
10 pages, 3106 KiB  
Article
Energy Storage Properties of Sol–Gel-Processed SrTiO3 Films
by Jinpeng Liu, Ying Wang, Xiao Zhai, Yinxiu Xue, Lanxia Hao, Hanfei Zhu, Chao Liu, Hongbo Cheng and Jun Ouyang
Materials 2023, 16(1), 31; https://doi.org/10.3390/ma16010031 - 21 Dec 2022
Cited by 8 | Viewed by 1675
Abstract
Dielectric films with a high energy storage density and a large breakdown strength are promising material candidates for pulsed power electrical and electronic applications. Perovskite-type dielectric SrTiO3 (STO) has demonstrated interesting properties desirable for capacitive energy storage, including a high dielectric constant, [...] Read more.
Dielectric films with a high energy storage density and a large breakdown strength are promising material candidates for pulsed power electrical and electronic applications. Perovskite-type dielectric SrTiO3 (STO) has demonstrated interesting properties desirable for capacitive energy storage, including a high dielectric constant, a wide bandgap and a size-induced paraelectric-to-ferroelectric transition. To pave a way toward large-scale production, STO film capacitors were deposited on Pt(111)/Ti/SiO2/Si(100) substrates by the sol–gel method in this paper, and their electrical properties including the energy storage performance were studied as a function of the annealing temperature in the postgrowth rapid thermal annealing (RTA) process. The appearance of a ferroelectric phase at a high annealing temperature of 750 °C was revealed by X-ray diffraction and electrical characterizations (ferroelectric P-E loop). However, this high dielectric constant phase came at the cost of a low breakdown strength and a large hysteresis loss, which are not desirable for the energy storage application. On the other hand, when the RTA process was performed at a low temperature of 550 °C, a poorly crystallized perovskite phase together with a substantial amount of impurity phases appeared, resulting in a low breakdown strength as well as a very low dielectric constant. It is revealed that the best energy storage performance, which corresponds to a large breakdown strength and a medium dielectric constant, is achieved in STO films annealed at 650 °C, which showed a large energy density of 55 J/cm3 and an outstanding energy efficiency of 94.7% (@ 6.5 MV/cm). These findings lay out the foundation for processing high-quality STO film capacitors via the manufacturing-friendly sol–gel method. Full article
(This article belongs to the Section Energy Materials)
Show Figures

Figure 1

Figure 1
<p>Flow chart for the preparation of the STO films in a sol–gel process.</p>
Full article ">Figure 2
<p>XRD patterns of the STO thin films annealed at different temperatures.</p>
Full article ">Figure 3
<p>SEM characterizations of the STO thin film at 650 °C: (<b>a</b>) surface and cross-sectional morphologies, (<b>b</b>–<b>d</b>) EDS mappings of Sr, Ti and O elements.</p>
Full article ">Figure 4
<p>(<b>a</b>) Quantitative elemental EDS spectra and (<b>b</b>,<b>c</b>) AFM surface morphologies of the STO thin films annealed at (<b>b</b>) 650 °C and (<b>c</b>) 750 °C.</p>
Full article ">Figure 5
<p>(<b>a</b>) Leakage current density vs. electric field (<span class="html-italic">J</span>-<span class="html-italic">E</span>) curves, (<b>b</b>) frequency-dependent dielectric behaviors of STO thin films annealed at different temperatures.</p>
Full article ">Figure 6
<p>Unipolar <span class="html-italic">P</span>-<span class="html-italic">E</span> loops of STO films annealed at different temperatures. The inset shows bipolar <span class="html-italic">P</span>-<span class="html-italic">E</span> loop of the STO film annealed at 750 °C.</p>
Full article ">Figure 7
<p>Comparison of energy storage performances between the STO film annealed at 650°C in this work and some previously reported STO-based films deposited on Si substrates [<a href="#B7-materials-16-00031" class="html-bibr">7</a>,<a href="#B16-materials-16-00031" class="html-bibr">16</a>,<a href="#B17-materials-16-00031" class="html-bibr">17</a>,<a href="#B20-materials-16-00031" class="html-bibr">20</a>,<a href="#B22-materials-16-00031" class="html-bibr">22</a>,<a href="#B26-materials-16-00031" class="html-bibr">26</a>,<a href="#B38-materials-16-00031" class="html-bibr">38</a>,<a href="#B39-materials-16-00031" class="html-bibr">39</a>,<a href="#B40-materials-16-00031" class="html-bibr">40</a>].</p>
Full article ">
13 pages, 1219 KiB  
Article
Differences in the Elastomeric Behavior of Polyglycine-Rich Regions of Spidroin 1 and 2 Proteins
by Luis F. Pacios, Joseph Arguelles, Cheryl Y. Hayashi, Gustavo V. Guinea, Manuel Elices and Jose Perez-Rigueiro
Polymers 2022, 14(23), 5263; https://doi.org/10.3390/polym14235263 - 2 Dec 2022
Cited by 2 | Viewed by 1383
Abstract
Two different polyglycine-rich fragments were selected as representatives of major ampullate gland spidroins (MaSp) 1 and 2 types, and their behavior in a water-saturated environment was simulated within the framework of molecular dynamics (MD). The selected fragments are found in the sequences of [...] Read more.
Two different polyglycine-rich fragments were selected as representatives of major ampullate gland spidroins (MaSp) 1 and 2 types, and their behavior in a water-saturated environment was simulated within the framework of molecular dynamics (MD). The selected fragments are found in the sequences of the proteins MaSp1a and MaSp2.2a of Argiope aurantia with respective lengths of 36 amino acids (MaSp1a) and 50 amino acids (MaSp2.2s). The simulation took the fully extended β-pleated conformation as reference, and MD was used to determine the equilibrium configuration in the absence of external forces. Subsequently, MD were employed to calculate the variation in the distance between the ends of the fragments when subjected to an increasing force. Both fragments show an elastomeric behavior that can be modeled as a freely jointed chain with links of comparable length, and a larger number of links in the spidroin 2 fragment. It is found, however, that the maximum recovery force recorded from the spidroin 2 peptide (Fmax ≈ 400 pN) is found to be significantly larger than that of the spidroin 1 (Fmax ≈ 250 pN). The increase in the recovery force of the spidroin 2 polyglycine-rich fragment may be correlated with the larger values observed in the strain at breaking of major ampullate silk fibers spun by Araneoidea species, which contain spidroin 2 proteins, compared to the material produced by spider species that lack these spidroins (RTA-clade). Full article
(This article belongs to the Section Biobased and Biodegradable Polymers)
Show Figures

Figure 1

Figure 1
<p>Sequence and extended β-pleated conformation of the selected fragments of <span class="html-italic">Argiope aurantia,</span> (<b>a</b>) MaSp1a (spidroin 1) and (<b>b</b>) MaSp2.2a (spidroin 2). Numbers in parentheses at both sequence ends indicate the corresponding residue numbers along the whole protein sequence. Distances are measured between both end Cα atoms (magenta spheres) in the optimized geometries. Black arrows represent the vector forces applied at both end Cα atoms.</p>
Full article ">Figure 2
<p>Comparison of the initial reference extended conformation (maximum L) and a representative conformation corresponding to the equilibrium state of the polyglycine-rich fragments of <span class="html-italic">A. aurantia,</span> (<b>a</b>) MaSp1a (spidroin 1) and (<b>b</b>) MaSp2.2a (spidroin 2), in MD simulations in the absence of external force. The distance between the end Cα atoms of the alanine residues, L (<a href="#polymers-14-05263-f001" class="html-fig">Figure 1</a>), is indicated. The value &lt;L&gt; corresponds to the arithmetic mean of the distance L obtained from three different independent trajectories calculated for each fragment in the absence of external force (<a href="#polymers-14-05263-t001" class="html-table">Table 1</a>).</p>
Full article ">Figure 3
<p>Force–distance curves obtained from the MD calculations on <span class="html-italic">A. aurantia</span> MaSp1a and MaSp2.2a fragments (values may be found in <a href="#app1-polymers-14-05263" class="html-app">Supplementary Table S1</a>).</p>
Full article ">Figure 4
<p>Force vs. L/L<sub>max</sub> curves plotted with the data of the MD simulations (see <a href="#app1-polymers-14-05263" class="html-app">Supplementary Table S1</a>). The theoretical curve is calculated from Equation (1), assuming a length of the links of a = 8.1 Å and a temperature of T = 298 K.</p>
Full article ">
8 pages, 471 KiB  
Article
Renal Tubular Acidosis in Pregnant Critically Ill COVID-19 Patients: A Secondary Analysis of a Prospective Cohort
by Simona Humbel, Pedro David Wendel-Garcia, Simone Unseld, Fabienne Noll, Reto Andreas Schuepbach, Christoph Camille Ganter, Harald Seeger, Sascha David and Rea Andermatt
J. Clin. Med. 2022, 11(15), 4273; https://doi.org/10.3390/jcm11154273 - 22 Jul 2022
Viewed by 1542
Abstract
Background: Renal tubular acidosis (RTA) is an extremely rare cause of metabolic acidosis (10 in 100,000). RTA has been linked neither to pregnancy nor to severe coronavirus disease 2019 (COVID-19). The purpose of this study was to analyze the prevalence and clinical course [...] Read more.
Background: Renal tubular acidosis (RTA) is an extremely rare cause of metabolic acidosis (10 in 100,000). RTA has been linked neither to pregnancy nor to severe coronavirus disease 2019 (COVID-19). The purpose of this study was to analyze the prevalence and clinical course of normal anion gap metabolic acidosis in critically ill pregnant COVID-19 patients and to compare them to an age-matched nonpregnant female patient cohort. Methods: Secondary analysis was conducted on a prospective observational cohort of critically ill patients suffering from COVID-19 consecutively admitted to a tertiary intensive care unit (ICU) between February 2020 and April 2021. Results: A total of 321 COVID-19 patients required admission to the ICU; 95 (30%) were female, and 18 (19%) were of childbearing age. Seven of eight (88%) pregnant women (all in the last trimester) required advanced respiratory support due to COVID-19. The estimated glomerular filtration rate was 135 (123–158) mL/min/m2 body surface area, and six pregnant women (86%) were diagnosed with a normal, respiratory compensated, anion gap metabolic acidosis (pHmin 7.3 (7.18–7.31), HCO3min 14.8 (12.8–18.6) mmol/L, and paCO2 3.4 (3.3–4.5) kPa). Three (43%) acidotic pregnant women fulfilled diagnostic criteria for RTA. All women recovered spontaneously within less 7 days. Conclusions: Metabolic acidosis seems to be very common (85%) in pregnant critically ill COVID-19 patients, and the prevalence of RTA might be higher than normal. It remains to be demonstrated if this observation is an indirect epiphenomenon or due to a direct viral effect on the tubular epithelium. Full article
(This article belongs to the Special Issue Challenges in the Management of Renal Patients in the COVID-19 Era)
Show Figures

Figure 1

Figure 1
<p>Flow chart of inclusion. Abbreviations: <span class="html-italic">n</span> (number).</p>
Full article ">
Back to TopTop