Reef

We examined whether adults of three species of sea urchins species (Diadema antillarum, Arbacia lixula, and Paracentrotus lividus) exhibit a consistent depth-dependent partitioning pattern on rocky reefs of the Canarian Archipelago (eastern Atlantic). Hydrodynamic experiments were carried out to quantify the resistance to flow-induced dislodgement in these three species. We tested the model that different morphology can result in habitat partitioning among these sea urchins. Abundances of D. antillarum increased with depth. In contrast, A. lixula and P. lividus showed the opposite zonation pattern, coexisting in high abundances in the shallowest depths (<5 m), and occurring in low densities in the deepest part of reefs (>7 m). Both A. lixula and P. lividus had greater adhesion-surface to body-height ratios than D. antillarum. Similarly, A. lixula and P. lividus showed a greater ability to resist flow-induced dislodgement compared with D. antillarum. The mean “velocity of dislodgement” was ∼300% and 50% greater for A. lixula and P. lividus, respectively, relative to D. antillarum, for any particular size. As a result, A. lixula and P. lividus are better fitted to life in high-flow environments than D. antillarum. We conclude that the risk of dislodgement by water motion likely play a relevant role in the vertical distribution patterns of these sea urchins in the eastern Atlantic.

Spatial distribution and temporal variation of epibenthic assemblages of coralligenous biogenic rocky outcrops occurring in the northern Adriatic Sea (45°04′–45°24′N; 12°23′–12°43′E) were investigated by photographic sampling from 2003 to 2006 at 12 randomly selected sites. The dominant reef-forming organisms were the encrusting calcareous algae (Lithophyllum stictaeforme, Lithothamnion minervae and Peyssonnelia polymorpha), while the main bioeroders were boring sponges (Cliona viridis, C. celata, C. thoosina, C. rhodensis, Piona vastifica) and the bivalve Gastrochaena dubia. Composition of the assemblages varied thorough years and among sites. Spatial heterogeneity, at local and regional scale, prevailed over temporal variation. This variability was related both to the geo-morphological features of the outcrops and to environmental variables. Sites clearly differed in the percent cover of reef builder and bioeroder species while only limited temporal variation within site was found. Some taxa revealed complex intra-site temporal trends. These results provide valuable information on the diversity and variability of epibenthic assemblages of the northern Adriatic coralligenous reefs, essential for the management and conservation of these unique biogenic habitats.

Large tropical and sub-tropical marine animals must meet their energetic requirements in a largely oligotrophic environment. Many planktivorous elasmobranchs, whose thermal ecologies prevent foraging in nutrient-rich polar waters, aggregate seasonally at predictable locations throughout tropical oceans where they are observed feeding. Here we investigate the foraging and oceanographic environment around Lady Elliot Island, a known aggregation site for reef manta rays Manta alfredi in the southern Great Barrier Reef. The foraging behaviour of reef manta rays was analysed in relation to zooplankton populations and local oceanography, and compared to long-term sighting records of reef manta rays from the dive operator on the island. Reef manta rays fed at Lady Elliot Island when zooplankton biomass and abundance were significantly higher than other times. The critical prey density threshold that triggered feeding was 11.2 mg m-3 while zooplankton size had no significant effect on feedi...

Artificial reefs, in the Eastern Mediterranean (Cyprus,) became a popular and frequently used tool, in fisheries and biodiversity conservation management. Even though evaluation studies about the efficacy of artificial reefs are plentiful in the rest of the Mediterranean (Central and Western), in the Eastern Basin they are largely absent. As the Eastern part of the Mediterranean Sea is characterised by unique physical parameters, the necessity to study artificial reefs under these contrasting regimes increases. The epibenthic communities of two unintentional artificial reefs (modern shipwrecks) in Cyprus (Zenobia) and Lebanon (Alice-B) were evaluated in 2010. Both shipwrecks are at similar depth, type of sea bottom, made of the same material (steel) and were sunk approximately the same period of time. However, Alice-B shipwreck off the coast of Lebanon is constantly exposed to higher levels of nutrients than Zenobia in Cyprus. Significant dissimilarities were observed in the composi...

The phenomenon of coral fluorescence in mesophotic reefs, although well described for shallow waters, remains largely unstudied. We found that representatives of many scleractinian species are brightly fluorescent at depths of 50-60 m at the Interuniversity Institute for Marine Sciences (IUI) reef in Eilat, Israel. Some of these fluorescent species have distribution maxima at mesophotic depths (40-100 m). Several individuals from these depths displayed yellow or orange-red fluorescence, the latter being essentially absent in corals from the shallowest parts of this reef. We demonstrate experimentally that in some cases the production of fluorescent pigments is independent of the exposure to light; while in others, the fluorescence signature is altered or lost when the animals are kept in darkness. Furthermore, we show that green-to-red photoconversion of fluorescent pigments mediated by short-wavelength light can occur also at depths where ultraviolet wavelengths are absent from the...

Caribbean reefs have experienced unprecedented changes in the past four decades. Of great concern is the perceived widespread shift from coral to macroalgal dominance and the question of whether it represents a new, stable equilibrium for coral-reef communities. The primary causes of the shift -- grazing pressure (top-down), nutrient loading (bottom-up) or direct coral mortality (side-in) -- still remain somewhat controversial in the coral reef literature. We have attempted to tease out the relative importance of each of these causes. Four insights emerge from our analysis of an early regional dataset of information on the benthic composition of Caribbean reefs spanning the years 1977–2001. First, although three-quarters of reef sites have experienced coral declines concomitant with macroalgal increases, fewer than 10% of the more than 200 sites studied were dominated by macroalgae in 2001, by even the most conservative definition of dominance. Using relative dominance as the thresh...

Continuing degradation of coral reef ecosystems has generated substantial interest in how management can support reef resilience. Fishing is the primary source of diminished reef function globally, leading to widespread calls for additional marine reserves to recover fish biomass and restore key ecosystem functions. Yet there are no established baselines for determining when these conservation objectives have been met or whether alternative management strategies provide similar ecosystem benefits. Here we establish empirical conservation benchmarks and fish biomass recovery timelines against which coral reefs can be assessed and managed by studying the recovery potential of more than 800 coral reefs along an exploitation gradient. We show that resident reef fish biomass in the absence of fishing (B0) averages ∼1,000 kg ha(-1), and that the vast majority (83%) of fished reefs are missing more than half their expected biomass, with severe consequences for key ecosystem functions such ...

The mechanisms by which reef fish larvae locate settlement habitat at the end of their pelagic phase are unclear. We used an in situ binary choice chamber and an artificial source of reef sound to determine whether pomacentrid larvae can use ambient sound to locate reefs. Larvae were caught in light traps and then placed in a submerged binary choice

The survey and mapping group (SMG) of Statoil is responsible for all seafloor mapping for pipelines and field development in Statoil. During numerous reconnaissance and pipeline route surveys over large portions of our contintental shelf, in the North, Norwegian and Barents Seas, we have only detected deep-water coral reefs in a few specific areas. The first reef we found was

A rationale is presented here for a primary role of bleaching in regulation of the coral–zooxanthellae symbiosis under conditions of stress. Corals and zooxanthellae have fundamentally different metabolic rates, requiring active homeostasis to limit zooxanthellae production and manage translocated products to maintain the symbiosis. The control processes for homeostasis are compromised by environmental stress, resulting in metabolic imbalance between the symbionts. For the coral–zooxanthella symbiosis the most direct way to minimize metabolic imbalance under stress is to reduce photosynthetic production by zooxanthellae. Two mechanisms have been demonstrated that do this: reduction of the chlorophyll concentration in individual zooxanthellae and reduction of the relative biomass of zooxanthellae. Both mechanisms result in visual whitening of the coral, termed bleaching. Arguments are presented here that bleaching provides the final control to minimize physiological damage from stress as an adversity response to metabolic imbalance. As such, bleaching meets the requirements of a stress response syndrome/general adaptive mechanism that is sensitive to internal states rather than external parameters. Variation in bleaching responses among holobionts reflects genotypic and phenotypic differentiation, allowing evolutionary change by natural selection. Thus, reef corals bleach to resist stress, and thereby have some capacity to adapt to and survive change. The extreme thermal anomalies causing mass coral bleaching worldwide lie outside the reaction norms for most coral–zooxanthellae holobionts, revealing the limitations of bleaching as a control mechanism.

Traditional stock assessment models were used to describe the current status of Lutjanus analis, L. chrysurus, L. jocu, L. synagris, and L. vivanus stocks off the coast of Northeast Brazil. The yield per recruit model, cohort analysis models (length-based cohort analysis (LCA), pseudo-cohort virtual population analysis (VPA), and real cohort VPA), and Thompson and Bell predictive model were used. The results showed LCA accumulates biases from pseudo-cohort VPA along with a high degree of sensitivity of growth parameters, whose determination is problematic and may not be adequate for many other reef species. Although the real cohort VPA based on short time series may also be limited, this method was determined to be the most appropriate within the traditional methods applied for the assessment of reef fish. However, the VPA model heavily depends on the accuracy of landing data and discards estimation and estimated natural mortality (M), so caution should be applied when using such models. The conservative fishing mortality index F0.1 was found to be the most adapted index when the uncertainty of parameter estimation and model limitations were considered. Consequently, a drastic reduction of 80–90% of the current fishing effort is recommended. Despite the VPA and Thompson and Bell model limitations, these models can provide insight into species/fishery dynamics and can also be utilised to analyse the effects of changes in fishing level on catches. In addition, the trends presented in this study are confirmed in a companion paper using more complex models.

The ability to estimate fish abundance accurately over a particular habitat is contingent upon the use of appropriate sampling methods. The objectives of this study were to compare the catch per unit area (A), length-specific bias, and relative catchability (q-ratio) of four different gear types for sampling red snapper (Lutjanus campechanus) over natural low-relief reef habitats on the inner continental shelf of the northern Gulf of Mexico. Specifically, our goal was to assess the overall performance of a standard otter trawl, a small fish trap, a chevron trap, and a stationary 4-camera underwater video array during six quarterly sampling cruises performed in 2004 and 2005. The sizes of snapper captured by trawls ranged from 30 to 250 mm total length (TL) (ages 0 and 1 yr). Trawls captured the most red snapper per unit area and had q-ratios of 3:1 to 5:1 relative to small fish traps for juvenile red snapper. The chevron trap collected the second highest number of red snapper and proved most useful at collecting red snapper from 150 to 440 mm TL (ages 1–5 yr). The q-ratio of the chevron trap relative to the underwater video array was approximately 3:1. Our comparison demonstrated the chevron trap is most effective for sampling adults, while trawls were the most effective gear for sampling age-0 yr fish.