KR20230068627A - Manufacturing Method of KRAS Specific Activated Cell Using KRAS Antigen Composition - Google Patents
Manufacturing Method of KRAS Specific Activated Cell Using KRAS Antigen Composition Download PDFInfo
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- KR20230068627A KR20230068627A KR1020210154616A KR20210154616A KR20230068627A KR 20230068627 A KR20230068627 A KR 20230068627A KR 1020210154616 A KR1020210154616 A KR 1020210154616A KR 20210154616 A KR20210154616 A KR 20210154616A KR 20230068627 A KR20230068627 A KR 20230068627A
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Abstract
본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법은 항원 조성물의 유효성분인 KRAS 돌연변이(G12D, G12V, 및 G13D) 재조합 중첩 펩타이드를 KRAS의 아미노산 서열에서 순차적으로 30개의 아미노산을 단위로 총 12개의 에피토프(epitope, n=1 내지 12이며 단, 마지막 에프토프(n=12)는 23개의 아미노산이다.)로 구분하되 에피토프 사이에 15개의 아미노산 서열이 중첩되도록 디자인하여 사용하므로 종래의 wild type KRAS 또는 KRAS 돌연변이 에피토프 펩타이드의 혼합물을 항원 조성물로 사용하여 T 세포를 유도하는 방법보다 향상된 KRAS 특이적 활성화 T 세포 유도 효과를 가지는 장점이 있다.
또한 본 발명의 Fast-IVS 방법은 종래의 IVS 방법에 대비하여 DC 세포의 성숙 및 T 세포 유도과정이 동시에 수행되므로 보다 효율적으로 KRAS 특이적 활성화 T 세포를 유도할 수 있는 장점이 있다.
따라서 본 발명의 KRAS 특이적 활성화 T 세포의 유도 방법을 적용하여 PBMC로부터 KRAS 특이적 활성화 T 세포를 제조하게 되면 종래의 IVS 방법 또는 wild-type KRAS 단백질이나 KRAS 에피토프 펩타이드의 혼합물을 유효성분으로 포함하는 항원 조성물을 이용하는 유도방법보다 향상된 효율로 KRAS 특이적 활성화 T 세포를 제조할 수 있는 장점이 있다.The method for inducing KRAS-specific activated T cells using the antigen composition for inducing KRAS-specific activated T cells of the present invention is a KRAS mutant (G12D, G12V, and G13D) recombinant overlapping peptide, which is an active ingredient of the antigen composition, in the amino acid sequence of KRAS. Sequentially divided into a total of 12 epitopes (n=1 to 12, but the last epitope (n=12) is 23 amino acids) in units of 30 amino acids, but overlapping 15 amino acid sequences between epitopes Since it is designed and used as much as possible, it has an advantage of having an improved KRAS-specific activated T cell inducing effect compared to the conventional method of inducing T cells using a mixture of wild-type KRAS or KRAS mutant epitope peptides as an antigen composition.
In addition, the Fast-IVS method of the present invention has the advantage of being able to more efficiently induce KRAS-specific activated T cells because DC cell maturation and T cell induction processes are simultaneously performed compared to the conventional IVS method.
Therefore, when KRAS-specific activated T cells are prepared from PBMC by applying the method of inducing KRAS-specific activated T cells of the present invention, the conventional IVS method or wild-type KRAS protein or a mixture of KRAS epitope peptides containing as an active ingredient There is an advantage in that KRAS-specific activated T cells can be produced with improved efficiency compared to the induction method using an antigen composition.
Description
본 발명은 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 항원 특이적 T 세포 유도방법에 관한 것이다.The present invention relates to a method for inducing antigen-specific T cells using an antigen composition for inducing KRAS-specific activated T cells.
종래의 항암 화학요법은 암의 재발 및 전이를 억제하는데 한계가 있으며 정상세포들을 사멸시키는 부작용이 있었다. 이를 극복하기 위하여 종양에 대한 면역반응을 증강시켜 암을 치료하는 다양한 면역항암치료방법들이 연구되고 있다. Conventional anticancer chemotherapy has limitations in suppressing recurrence and metastasis of cancer and has side effects of killing normal cells. In order to overcome this, various immuno-anticancer treatment methods for treating cancer by enhancing the immune response to tumors have been studied.
면역항암치료법은 암 환자의 면역계를 활성화 시켜 암 치료효과를 높이는 치료법으로 암 특이적인 CTL(Cytotoxic T Lymphocyte)을 내인성으로 유도하거나 이를 주입하여 암세포를 사멸시키는 방법이다. 면역항암치료법 중 면역세포를 이용하는 방법으로 Lymphokine activate killer (LAK) 면역세포 치료법이 있다. 상기 LAK 면역세포 치료법은 수술, 항암요법, 방사선 치료등에 실패 했던 암 환자들에 대해 고무적인 임상결과들을 보여주었다. 그러나 상기 LAK 면역세포 치료법은 비특이적 면역 반응으로 인해 암세포 사멸 효율이 낮은 문제점이 있을 뿐 아니라 배양공정에서 인터루킨-2(IL-2) 림포카인만을 사용하므로 면역세포가 탈진(Exhaustion)되어 생체내 생존 능력이 떨어지므로 주기적이며 반복적인 치료가 필요한 임상적 한계가 있었다. Immunotherapy is a method of inducing cancer-specific CTL (Cytotoxic T Lymphocyte) endogenously or injecting it to kill cancer cells. As a method of using immune cells among immuno-anticancer treatments, there is a Lymphokine activate killer (LAK) immune cell therapy. The LAK immune cell therapy showed encouraging clinical results for cancer patients who had failed surgery, chemotherapy, and radiation therapy. However, the LAK immune cell therapy not only has a problem of low cancer cell killing efficiency due to a non-specific immune response, but also uses only interleukin-2 (IL-2) lymphokine in the culture process, so immune cells are exhausted and survive in vivo There was a clinical limitation that required periodic and repetitive treatment because of poor ability.
상기 문제점을 해결하기 위하여 항암용 펩타이드 백신이 개발되고 있다. 상기 펩타이드 백신은 암항원 중 면역원성이 높은 부분을 선별하고 이를 펩타이드로 디자인한 후 이를 이용하여 면역세포를 활성화시킨다. 따라서 IL-2 림포카인의 사용으로 인한 면역세포의 탈진에 대한 우려가 없는 장점이 있다. 그러나 상기 펩타이드 백신은 암세포의 타겟 부위가 돌연변이를 일으키게 되면 면역회피가 일어 날 수 있을 뿐 아니라 면역반응에서 CD4 T 세포의 도움을 받지 못하여 면역 반응성이 낮을 수 있고 MHC class I 분자에 올려지는 펩타이드로 디자인되었기 때문에 인간백혈구 항원(Human leukocyte antigen, HLA) 타입에 제한이 있는 단점이 있었다. In order to solve the above problems, anti-cancer peptide vaccines are being developed. The peptide vaccine selects a part with high immunogenicity among cancer antigens, designs it as a peptide, and uses it to activate immune cells. Therefore, there is an advantage that there is no concern about exhaustion of immune cells due to the use of IL-2 lymphokine. However, the peptide vaccine can not only cause immune evasion when the target site of cancer cells mutates, but also have low immune reactivity because CD4 T cells do not help in the immune response, and are designed with peptides that are loaded on MHC class I molecules Because of this, there was a disadvantage in that there was a limitation in the type of human leukocyte antigen (HLA).
상기 문제를 해소하기 위해 항원전체를 포함하고 면역원성이 높은 부분의 펩타이드를 중첩하여 설계하는 중첩 펩타이드(overlapping peptide, OLP) 백신이 개발되고 있다. 상기 OLP 백신은 종래의 펩타이드 백신과 달리 항원전체를 포함하므로 CD4 T세포 도움을 받아 면역 반응성이 높을 뿐 아니라 면역 반응기간도 더 오래 지속되며 HLA 타입에 대한 제한이 없는 장점이 있다. 그러나 상기 OLP 백신은 제조비용이 높고 면역조절이 상대적으로 어렵다는 문제점이 있었다.In order to solve the above problem, overlapping peptide (OLP) vaccines designed by overlapping peptides containing the entire antigen and having high immunogenicity are being developed. Unlike conventional peptide vaccines, the OLP vaccine contains all antigens, so it has a high immune response with the help of CD4 T cells, a longer immune response period, and no HLA type restrictions. However, the OLP vaccine has a problem in that manufacturing cost is high and immunomodulation is relatively difficult.
면역세포 치료법에 있어서 백신을 이용하여 항원 특이적 T 세포를 제조하는 방법 또한 중요한 요소이다. 일반적으로 항원 특이적 T 세포를 제조하기 위해서는 혈액으로부터 단핵구(monocyte)를 분리한 후 성숙(maturation)과정을 통해 mo수지상 세포(mo dendritic cell)를 수득한 후 항원을 별도로 처리한 환경에서 상기 수지상 세포와 T 세포를 공배양(co-culture)하므로 항원 특이적 T 세포(Ag-specific T cell)를 제조하게 된다. 상기 moDC를 이용한 방법은 항원 특이적 T 세포유도 방법은 DC 세포의 성숙공정과 T 세포 배양 공정을 나누어 진행하게 되므로 추가적인 시간, 비용 ,혈액이 요구되는 단점이 있었다.In immune cell therapy, a method for producing antigen-specific T cells using a vaccine is also an important factor. In general, in order to produce antigen-specific T cells, after isolating monocytes from blood, mo dendritic cells are obtained through a maturation process, and then the dendritic cells are separately treated in an environment where antigens are separately treated. Ag-specific T cells are produced by co-culture with T cells. The method using the moDC has disadvantages of requiring additional time, cost, and blood because the antigen-specific T cell induction method proceeds by dividing the DC cell maturation process and the T cell culture process.
여러 암 항원 중 KRAS 돌연변이는 고형암의 약 20%에서 발견되고 있는 발암유발변이로, 주로 췌장 및 대장의 선암, 폐암 등에서 발견되고 있다. KRAS 돌연변이 유전자에 의존성을 보이는 종양을 타겟으로 하는 치료법은 KRAS 돌연변이 유전자에 의해 발현되는 K-ras 돌연변이체들에 개별적으로 결합하는 항체를 만들기 어려운 이유로 K-ras의 기능을 억제하거나 비활성화 하는 간접적인 치료법에 국한되어 있어 효과가 제한적이었다.Among several cancer antigens, KRAS mutations are oncogenic mutations found in about 20% of solid cancers, and are found mainly in adenocarcinomas of the pancreas and colon, lung cancers, and the like. Therapies targeting tumors dependent on KRAS mutant genes are indirect treatments that inhibit or inactivate the function of K-ras because it is difficult to make antibodies that individually bind to K-ras mutants expressed by KRAS mutant genes. was limited and its effectiveness was limited.
따라서 K-ras의 가장 빈번하게 나타나는 여러 돌연변이 부위를 포함하되 상기 문제점을 해결한 항원을 제시하여 K-ras 돌연변이에 결합하여 직접적인 면역반응을 일으킬 수 있는 내인성 면역세포를 선택적으로 증폭하고 이를 타겟 암 치료제로 개발하게 되면 효율적으로 암세포를 표적하고 이를 사멸 할 수 있으므로 암 치료 효과가 극대화되고 항암효과 지속력이 높은 효율적인 치료제로서 사용 가능할 것으로 기대된다.Therefore, by presenting an antigen that solves the above problems, including the most frequently occurring mutation sites of K-ras, it selectively amplifies endogenous immune cells capable of inducing a direct immune response by binding to K-ras mutations, and using them as a target cancer treatment It is expected that it can be used as an effective treatment that maximizes the effect of cancer treatment and has a high durability of anti-cancer effect because it can efficiently target and kill cancer cells.
본 명세서에서 언급된 특허문헌 및 참고문헌은 각각의 문헌이 참조에 의해 개별적이고 명확하게 특정된 것과 동일한 정도로 본 명세서에 참조로 삽입된다. The patents and references mentioned herein are incorporated herein by reference to the same extent as if each document were individually and expressly specified by reference.
본 발명의 목적은 KRAS 전체 아미노산 서열 및 돌연변이를 포함하도록 디자인되며 재조합 기술을 이용하여 제조되어 경제적 효율성이 뛰어난 KRAS 특이적 활성화 T 세포 유도용 항원을 이용하되 DC 세포의 성숙공정과 T 세포의 배양 및 유도공정을 동시에 수행하여 효율적으로 KRAS 특이적 활성화 T 세포를 유도할 수 있는 항원 특이적 T 세포 유도방법을 제공하는데 있다.An object of the present invention is to use an antigen for inducing KRAS-specific activated T cells, which is designed to include the entire KRAS amino acid sequence and mutations and is manufactured using recombinant technology and has excellent economic efficiency, but the DC cell maturation process and T cell culture and It is an object of the present invention to provide a method for inducing antigen-specific T cells capable of efficiently inducing KRAS-specific activated T cells by simultaneously performing the induction process.
본 발명의 다른 목적 및 기술적 특징은 이하의 발명의 상세한 설명, 청구의 범위 및 도면에 의해 보다 구체적으로 제시된다. Other objects and technical features of the present invention are presented more specifically by the following detailed description, claims and drawings.
본 발명은 KRAS 특이적 활성화 T 세포 유도용 항원 조성물과 1차 싸이토카인(cytokine)을 포함하는 배지에서 말초혈액단핵세포(Peripheral Blood Mononuclear Cell, PBMC)를 배양하여 수지상 세포(dentritic cell)를 성숙시키는 동시에 KRAS 특이적 활성화 T 세포를 유도하는 제 1 단계; 상기 배양된 PBMC에 2차 싸이토카인을 첨가하고 배양하여 KRAS 특이적 활성화 T 세포를 더 유도하는 제 2 단계; 및 상기 2차 싸이토카인을 첨가하고 배양한 PBMC를 배양하여 KRAS 특이적 활성화 T 세포를 증폭시킨 후 수득하는 제 3 단계;를 포함하는 것을 특징으로 하는 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법 및 이를 이용하여 제조한 T 세포를 제공한다.The present invention cultivates peripheral blood mononuclear cells (PBMCs) in a medium containing an antigen composition for inducing KRAS-specific activated T cells and primary cytokines to mature dentritic cells. A first step of inducing KRAS-specific activated T cells; A second step of further inducing KRAS-specific activated T cells by adding and culturing a secondary cytokine to the cultured PBMC; and a third step of amplifying KRAS-specific activated T cells by culturing PBMCs cultured with the addition of the secondary cytokine; KRAS using an antigen composition for inducing KRAS-specific activated T cells comprising: A method for inducing specific activated T cells and T cells prepared using the same are provided.
상기 제 1 단계의 배양은 1 day 동안 수행하며, 상기 제 2 단계의 배양은 2 days 동안 수행하며, 상기 제 3 단계의 배양은 10 days 동안 수행하는 것을 특징으로 하며 상기 1차 싸이토카인은 인터루킨-4(Interleukin-4) 및 과립구 대식세포 콜로니 자극인자(Granulocyte-Macrophage Colony-Stimulating Factor, GM-CSF)이며 상기 2차 싸이토카인은 종양괴사인자-α(Tumor Necrosis Factor-α), 인터루킨-1β(Interleukin-1β), 및 프로스타글란딘 E2(Prostaglandin E2)인 것을 특징으로 한다.The culturing in the first step is performed for 1 day, the culturing in the second step is performed for 2 days, and the culturing in the third step is performed for 10 days, and the primary cytokine is interleukin-4. (Interleukin-4) and granulocyte-macrophage colony-stimulating factor (GM-CSF), and the secondary cytokines are tumor necrosis factor-α, interleukin-1β (Interleukin-1β) 1β), and prostaglandin E2.
상기 KRAS 특이적 활성화 T 세포 유도용 항원 조성물은 서열번호 1의 아미노산 서열로 이루어진 KRAS 돌연변이 재조합 중첩 펩타이드를 유효성분으로 포함하는 것을 특징으로 하며 KRAS 돌연변이는 G12D, G12V, 및 G13D이다.The antigen composition for inducing KRAS-specific activated T cells is characterized in that it comprises a KRAS mutant recombinant overlapping peptide consisting of the amino acid sequence of SEQ ID NO: 1 as an active ingredient, and the KRAS mutations are G12D, G12V, and G13D.
상기 KRAS 돌연변이 재조합 중첩 펩타이드는 서열번호 2로 이루어진 KRAS의 아미노산 서열에서 어느 하나의 아미노산으로부터 순차적으로 나열된 아미노산 서열을 단위로 하는 총 12 종류의 에피토프(epitope(n=1, 2, 3....10, 11, 12); 여기서 n은 에피토프의 순번을 의미하며 에피토프(n=1 내지 11)는 30개의 아미노산 서열을 포함하고 마지막 에프토프(n=12)는 23개의 아미노산 서열을 포함한다.)를 포함하되 에피토프(n=1)를 제외한 에피토프(n=2, 3,...12)는 N-terminal 방향 15개의 아미노산 서열이 직전 순번의 에피토프(n-1)의 C-terminal 방향 15개의 아미노산 서열과 서로 중첩되도록 디자인된 것을 특징으로 한다.The KRAS mutant recombinant overlapping peptide has a total of 12 types of epitopes (epitopes (n = 1, 2, 3... 10, 11, 12); where n means the order of the epitope, the epitope (n = 1 to 11) contains a 30 amino acid sequence, and the last epitope (n = 12) contains a 23 amino acid sequence.) Including but excluding the epitope (n = 1), the epitope (n = 2, 3, ... 12) has 15 amino acid sequences in the N-terminal direction and 15 amino acid sequences in the C-terminal direction of the immediately preceding epitope (n-1) It is characterized in that it is designed to overlap with the amino acid sequence.
상기 KRAS 돌연변이 재조합 중첩 펩타이드는 상기 에피토프(n=1, 2, 3...10, 11, 12)가 순번에 따라 위치하며 상기 에피토프 사이는 LRMK-링커로 연결된 것을 특징으로 하며 상기 에피토프(n=1)는 KRAS 돌연변이 G12V를 포함하며; 상기 에피토프(n=1)의 N-terminal에는 KRAS 돌연변이 G12D를 포함하는 에피토프(n=1)가 LRMK-링커로 더 연결되고; 상기 에피토프(n=12)의 C-terminal에는 KRAS 돌연변이 G13D을 포함하는 에피토프(n=1)가 LRMK-링커로 더 연결되며; 상기 KRAS 돌연변이 G13D을 포함하는 에피토프(n=1)의 C-terminal에는 KRAS 돌연변이가 포함되지 않은 에피토프(n=1)가 LRMK-링커로 더 연결되는 것을 특징으로 한다.The KRAS mutant recombinant overlapping peptide is characterized in that the epitopes (n = 1, 2, 3 ... 10, 11, 12) are located in sequence, and the epitopes are linked by an LRMK-linker, and the epitope (n = 1) contains the KRAS mutation G12V; An epitope (n = 1) containing KRAS mutation G12D is further linked to the N-terminal of the epitope (n = 1) by an LRMK-linker; An epitope (n = 1) containing KRAS mutation G13D is further linked to the C-terminal of the epitope (n = 12) by an LRMK-linker; The C-terminal of the epitope (n = 1) containing the KRAS mutation G13D is characterized in that the epitope (n = 1) not containing the KRAS mutation is further linked with an LRMK-linker.
본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법은 항원 조성물의 유효성분인 KRAS 돌연변이(G12D, G12V, 및 G13D) 재조합 중첩 펩타이드를 KRAS의 아미노산 서열에서 순차적으로 30개의 아미노산을 단위로 총 12개의 에피토프(epitope, n=1 내지 12이며 단, 마지막 에프토프(n=12)는 23개의 아미노산이다.)로 구분하되 에피토프 사이에 15개의 아미노산 서열이 중첩되도록 디자인하여 사용하므로 종래의 wild type KRAS 또는 KRAS 돌연변이 에피토프 펩타이드의 혼합물을 항원 조성물로 사용하여 T 세포를 유도하는 방법보다 향상된 KRAS 특이적 활성화 T 세포 유도 효과를 가지는 장점이 있다.The method for inducing KRAS-specific activated T cells using the antigen composition for inducing KRAS-specific activated T cells of the present invention is a KRAS mutant (G12D, G12V, and G13D) recombinant overlapping peptide, which is an active ingredient of the antigen composition, in the amino acid sequence of KRAS. Sequentially divided into a total of 12 epitopes (n=1 to 12, but the last epitope (n=12) is 23 amino acids) in units of 30 amino acids, but overlapping 15 amino acid sequences between epitopes Since it is designed and used as much as possible, it has an advantage of having an improved KRAS-specific activated T cell inducing effect compared to the conventional method of inducing T cells using a mixture of wild-type KRAS or KRAS mutant epitope peptides as an antigen composition.
또한 본 발명의 Fast-IVS 방법은 종래의 IVS 방법에 대비하여 DC 세포의 성숙 및 T 세포 유도과정이 동시에 수행되므로 보다 효율적으로 KRAS 특이적 활성화 T 세포를 유도할 수 있는 장점이 있다. In addition, the Fast-IVS method of the present invention has the advantage of being able to more efficiently induce KRAS-specific activated T cells because DC cell maturation and T cell induction processes are simultaneously performed compared to the conventional IVS method.
따라서 본 발명의 KRAS 특이적 활성화 T 세포의 유도 방법을 적용하여 PBMC로부터 KRAS 특이적 활성화 T 세포를 제조하게 되면 종래의 IVS 방법 또는 wild-type KRAS 단백질이나 KRAS 에피토프 펩타이드의 혼합물을 유효성분으로 포함하는 항원 조성물을 이용하는 유도방법보다 향상된 효율로 KRAS 특이적 활성화 T 세포를 제조할 수 있는 장점이 있다.Therefore, when KRAS-specific activated T cells are prepared from PBMC by applying the method of inducing KRAS-specific activated T cells of the present invention, the conventional IVS method or wild-type KRAS protein or a mixture of KRAS epitope peptides containing as an active ingredient There is an advantage in that KRAS-specific activated T cells can be produced with improved efficiency compared to the induction method using an antigen composition.
도 1은 본 발명의 KRAS(M)-ROP의 아미노산 서열 구조를 보여준다.
도 2는 본 발명의 KRAS(M)-ROP에 대한 PBMC의 반응성을 분석한 결과를 보여준다.
도 3은 본 발명의 KRAS(M)-ROP 농도에 따른 LP-1 PBMC의 특이적 CD3+ T 세포 비율을 분석한 결과를 보여준다.
도 4는 본 발명의 KRAS(M)-ROP, KRAS1-24Wild-type, 및 KRAS1-24m돌연변이에 대한 LP-1 PBMC의 항원 특이적 CD3+ T 세포 비율을 분석한 결과를 보여준다.
도 5는 본 발명의 Fast-IVS 공정과 No-Cytokine 공정을 비교한 결과를 보여준다.
도 6은 본 발명의 ROP-T 세포에 대한 KRAS 돌연변이 에피토프 스크리닝 결과를 보여준다.
도 7은 본 발명의 HLA-DQ blocking 에세이 결과를 보여준다.
도 8은 본 발명의 조건별 IFN-γ를 분비(IFN-γ+)하는 CD3+ T 세포의 비율을 보여준다.Figure 1 shows the amino acid sequence structure of KRAS (M) -ROP of the present invention.
Figure 2 shows the results of analyzing the reactivity of PBMC to KRAS (M) -ROP of the present invention.
Figure 3 shows the results of analyzing the specific CD3+ T cell ratio of LP-1 PBMC according to the concentration of KRAS (M) -ROP of the present invention.
Figure 4 shows the results of analyzing the ratio of antigen-specific CD3+ T cells in LP-1 PBMCs for KRAS(M)-ROP, KRAS 1-24 Wild-type, and KRAS 1-24 m mutants of the present invention.
Figure 5 shows the results of comparing the Fast-IVS process and the No-Cytokine process of the present invention.
Figure 6 shows the results of KRAS mutant epitope screening for ROP-T cells of the present invention.
7 shows the results of the HLA-DQ blocking assay of the present invention.
Figure 8 shows the ratio of CD3+ T cells secreting IFN-γ (IFN-γ+) for each condition of the present invention.
본 발명은 KRAS 특이적 활성화 T 세포 유도용 항원 조성물과 1차 싸이토카인(cytokine)을 포함하는 배지에서 말초혈액단핵세포(Peripheral Blood Mononuclear Cell, PBMC)를 배양하여 수지상 세포(dentritic cell)를 성숙시키는 동시에 KRAS 특이적 활성화 T 세포를 유도하는 제 1 단계; 상기 배양된 PBMC에 2차 싸이토카인을 첨가하고 배양하여 KRAS 특이적 활성화 T 세포를 더 유도하는 제 2 단계; 및 상기 2차 싸이토카인을 첨가하고 배양한 PBMC를 배양하여 KRAS 특이적 활성화 T 세포를 증폭시킨 후 수득하는 제 3 단계;를 포함하는 것을 특징으로 하는 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법을 제공한다. The present invention cultivates peripheral blood mononuclear cells (PBMCs) in a medium containing an antigen composition for inducing KRAS-specific activated T cells and primary cytokines to mature dentritic cells. A first step of inducing KRAS-specific activated T cells; A second step of further inducing KRAS-specific activated T cells by adding and culturing a secondary cytokine to the cultured PBMC; and a third step of amplifying KRAS-specific activated T cells by culturing PBMCs cultured with the addition of the secondary cytokine; KRAS using an antigen composition for inducing KRAS-specific activated T cells comprising: A method for inducing specific activated T cells is provided.
본 발명의 KRAS 특이적 활성화 T 세포의 유도 방법은 Fast-IVS(in vitro stimulation)로서 종래의 IVS와 구분된다. 상기 IVS는 혈액에서 분리한 단핵구(monocyte)로부터 분화와 성숙(maturation) 과정을 통해 단핵구 유도 수지상 세포(monocyte-derived dendritic cell, moDC)를 수득한 후 본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 처리한 환경에서 T 세포와 공배양(co-culture)하는 방법을 의미한다. 이에 반하여 본 발명의 Fast-IVS는 PBMC 내의 DC세포에 대하여 성숙과정과 항원(KRAS 특이적 활성화 T 세포 유도용 항원 조성물)처리를 동시에 수행하는 차이점이 있다. The method of inducing KRAS-specific activated T cells of the present invention is Fast-IVS (in vitro stimulation), which is different from conventional IVS. The IVS is a monocyte-derived dendritic cell (moDC) obtained from monocytes isolated from blood through a process of differentiation and maturation, and then the antigen for inducing KRAS-specific activated T cells of the present invention It refers to a method of co-culture with T cells in an environment treated with the composition. On the other hand, the Fast-IVS of the present invention has a difference in that the maturation process and antigen (antigen composition for inducing KRAS-specific activated T cells) treatment are simultaneously performed on DC cells in PBMC.
상기 T 세포 유도과정에서 항원으로 사용되는 KRAS 특이적 활성화 T 세포 유도용 항원 조성물은 DC 세포의 성숙 및 생장에 필요한 싸이토카인(cytokine), 호르몬 및 완충용액을 더 포함할 수 있다. 바람직하게는 싸이토카인(cytokine)은 인터루킨-4(interleukin-4), 인터루킨-1β, 과립구 대식세포 콜로니 자극 인자(Granulocyte-Macrophage Colony-Stimulating Factor, GM-CSF), 종양괴사인자-α(Tumor Necrosis Factor-α, TNF-α)일 수 있으며 상기 호르몬은 프로스타글란딘 E2(Prostaglandin E2, PGE2)일 수 있다. The antigen composition for inducing KRAS-specific activated T cells used as an antigen in the T cell induction process may further include cytokines, hormones, and buffers necessary for DC cell maturation and growth. Preferably, the cytokine is interleukin-4, interleukin-1β, granulocyte-macrophage colony-stimulating factor (GM-CSF), tumor necrosis factor-α (Tumor Necrosis Factor). -α, TNF-α), and the hormone may be prostaglandin E2 (PGE2).
본 발명의 일 실시예에 따르면 상기 인터루킨-4(Interleukin-4) 및 과립구 대식세포 콜로니 자극인자(Granulocyte-Macrophage Colony-Stimulating Factor, GM-CSF)는 1차 싸이토카인으로서 PBMC내 단핵구(Monocyte)를 DC (Dendritic cell)로 분화 유도하는데 사용되었으며 상기 종양괴사인자-α(Tumor Necrosis Factor-α), 인터루킨-1β(Interleukin-1β), 및 프로스타글란딘 E2(Prostaglandin E2)은 2차 싸이토카인으로서 미성숙DC(Immature DC)를 성숙시키기 위하여 사용되었다.According to one embodiment of the present invention, the interleukin-4 and the granulocyte-macrophage colony-stimulating factor (GM-CSF) are primary cytokines, which induce monocytes in PBMC into DC It was used to induce differentiation into dendritic cells, and the tumor necrosis factor-α, interleukin-1β, and prostaglandin E2 are secondary cytokines, immature DC ) was used to mature.
본 발명의 다른 실시예에 따르면 상기 제 1 단계의 배양은 1 day 동안 수행하며, 상기 제 2 단계의 배양은 2 days 동안 수행하며, 상기 제 3 단계의 배양은 10 days 동안 수행하는 것을 특징으로 한다. 상기 단계별 배양 기간은 실시예를 통해 가장 효율적으로 KRAS 특이적 활성화 T 세포를 유도할 수 있는 방법으로 최적화 된 것이다. According to another embodiment of the present invention, the culturing of the first step is performed for 1 day, the culturing of the second step is performed for 2 days, and the culturing of the third step is performed for 10 days. . The step-by-step culturing period was optimized as a method capable of inducing KRAS-specific activated T cells most efficiently through the examples.
본 발명은 서열번호 1의 아미노산 서열로 이루어진 KRAS 돌연변이 재조합 중첩 펩타이드를 유효성분으로 포함하는 것을 특징으로 하는 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법을 제공한다.The present invention provides a method for inducing KRAS-specific activated T cells using an antigen composition for inducing KRAS-specific activated T cells, which comprises as an active ingredient a KRAS mutant recombinant overlapping peptide consisting of the amino acid sequence of SEQ ID NO: 1 .
상기 서열번호 1은 KRAS 단백질의 아미노산서열로서 189개의 아미노산으로 구성된다. 상기 KRAS 돌연변이는 12번째 아미노산이 글리신(Glycine, G)에서 아스파르트산(Aspartic acid, D)으로 치환되었거나, 12번째 아미노산이 글리신(Glycine, G)에서 발린(Valine, V)으로 치환되었거나, 13번째 아미노산이 글리신(Glycine, G)에서 아스파르트산(Aspartic acid, D)으로 치환된 것을 의미한다.SEQ ID NO: 1 is an amino acid sequence of the KRAS protein and consists of 189 amino acids. In the KRAS mutation, the 12th amino acid is substituted from glycine (G) to aspartic acid (D), the 12th amino acid is substituted from glycine (G) to valine (V), or the 13th amino acid is substituted from glycine (G) to valine (V). It means that an amino acid is substituted from glycine (G) to aspartic acid (D).
상기 재조합(recombinant)은 디자인된 항원의 유전정보를 포함하는 재조합 플라스미드 DNA에 끼워 넣는 것을 의미하며 상기 재조합 플라스미드 DNA를 미생물에 형질전환시켜 단백질을 발현시키고 이를 정제하게 되면 본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원이 수득된다. The recombinant means inserting into a recombinant plasmid DNA containing the genetic information of the designed antigen, and the recombinant plasmid DNA is transformed into a microorganism to express a protein and purify the KRAS-specific activated T of the present invention Antigens for cell derivation are obtained.
본 발명의 KRAS 돌연변이 재조합 중첩 펩타이드는 서열번호 2로 이루어진 KRAS의 아미노산 서열에서 어느 하나의 아미노산으로부터 순차적으로 나열된 아미노산 서열을 단위로 하는 총 12 종류의 에피토프(epitope(n=1, 2, 3....10, 11, 12); 여기서 n은 에피토프의 순번을 의미하며 에피토프(n=1 내지 11)는 30개의 아미노산 서열을 포함하고 마지막 에프토프(n=12)는 23개의 아미노산 서열을 포함한다.)를 포함하되 에피토프(n=1)를 제외한 에피토프(n=2, 3,...12)는 N-terminal 방향 15개의 아미노산 서열이 직전 순번의 에피토프(n-1)의 C-terminal 방향 15개의 아미노산 서열과 서로 중첩되도록 디자인된다. The KRAS mutant recombinant overlapping peptide of the present invention has a total of 12 types of epitopes (epitopes (n = 1, 2, 3.. ..10, 11, 12); where n means the sequence of epitopes, the epitope (n = 1 to 11) contains a sequence of 30 amino acids and the last epitope (n = 12) contains a sequence of 23 amino acids .), but the epitope (n = 2, 3, ... 12) except for the epitope (n = 1) is the C-terminal direction of the 15 amino acid sequence in the N-terminal direction of the immediately preceding epitope (n-1) It is designed to overlap each other with 15 amino acid sequences.
상기 KRAS 돌연변이 재조합 중첩 펩타이드는 상기 에피토프(n=1, 2, 3...10, 11, 12)가 순번에 따라 위치하며 상기 에피토프 사이는 LRMK-링커로 연결된 것을 특징으로 하며 상기 LRMK-링커는 루신(Leucine, L), 아르기닌(Arginine, R), 메티오닌(Methione, M), 라이신(Lysine, K)으로 구성된 링커로서 수지상세포에 의한 항원제시과정(MHCI class I pathway)에 유리한 장점이 있다. The KRAS mutant recombinant overlapping peptide is characterized in that the epitopes (n = 1, 2, 3 ... 10, 11, 12) are located in sequence and connected by an LRMK-linker between the epitopes, and the LRMK-linker As a linker composed of Leucine (L), Arginine (R), Methionine (M), and Lysine (K), it has an advantage in the MHCI class I pathway by dendritic cells.
상세하게는 본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원 조성물은 하기와 같이 디자인된다. 상기 에피토프(n=1)는 KRAS 돌연변이 G12V를 포함하며; 상기 에피토프(n=1)의 N-terminal에는 KRAS 돌연변이 G12D를 포함하는 에피토프(n=1)가 LRMK-링커로 더 연결되고; 상기 에피토프(n=12)의 C-terminal에는 KRAS 돌연변이 G13D을 포함하는 에피토프(n=1)가 LRMK-링커로 더 연결되며; 상기 KRAS 돌연변이 G13D을 포함하는 에피토프(n=1)의 C-terminal에는 KRAS 돌연변이가 포함되지 않은 에피토프(n=1)가 LRMK-링커로 더 연결된다.In detail, the antigen composition for inducing KRAS-specific activated T cells of the present invention is designed as follows. The epitope (n=1) includes the KRAS mutation G12V; An epitope (n = 1) containing KRAS mutation G12D is further linked to the N-terminal of the epitope (n = 1) by an LRMK-linker; An epitope (n = 1) containing KRAS mutation G13D is further linked to the C-terminal of the epitope (n = 12) by an LRMK-linker; An epitope (n = 1) without a KRAS mutation is further linked to the C-terminal of the epitope (n = 1) containing the KRAS mutation G13D by an LRMK-linker.
본 발명의 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용하면 KRAS 돌연변이(G12D, G12V, G13D)에 대해 특이적인 T 세포를 유도할 수 있으며 상기 KRAS 돌연변이(G12D, G12V, G13D)에 대해 특이적인 T 세포는 KRAS 돌연변이(G12D, G12V, G13D)를 가지는 암세포를 치료하는데 사용 가능하다. Using the antigen composition for inducing KRAS-specific activated T cells of the present invention, T cells specific for KRAS mutations (G12D, G12V, G13D) can be induced, and specific for the KRAS mutations (G12D, G12V, G13D) T cells can be used to treat cancer cells with KRAS mutations (G12D, G12V, G13D).
KRAS는 RAS 단백질의 일종으로 세포의 분화, 증식 및 생존과 관련된 신호전달체계에서 중요한 역할을 하는 small GTPases 단백질이다. 상기 RAS 단백질은 여러 가지 암종에서 돌연변이로 발견되는 oncogene으로 잘 알려져 있으며 RAS-유래 암종의 85%가 KRAS 돌연변이에 의한 것으로 알려져 있다. 따라서 KRAS 돌연변이를 특이적으로 인식하는 T 세포를 증폭시키게 되면 KRAS 돌연변이를 가진 암을 제거하여 이를 치료하거나 암에 대한 백신 역할을 수행할 수 있게 된다. 상기 암은 KRAS 돌연변이를 가진 암이라면 제한되지 않으며 그 예로서 부신피질 암종(ACC), 방광요로상피 암종(BLCA), 유방 침습 암종(BRCA), 경부 편평 세포 암종 및 자궁경부내 선암종(CESC), 결장 선암종(COAD), 만성 림프성 백혈병(CLL), 대장암(CRC), 미만성 거대 B-세포 림프종(DLBCL), 다형성아교모세포종(GBM), 두경부 편평 세포 암종(HNSC), 혐색소 신장(KICH), 신장 투명 세포 암종(KIRC), 신장 유두상 세포 암종(KIRP), 급성 골수성 백혈병(LAML), 간세포 암종(LIHC), 폐 선암종(LUAD), 폐 편평 세포 암종(LUSC), 다발성 골수종(MM), 난소 장액낭선암종(OV), 췌장 선암종(PAAD), 전립선 선암종(PRAD), 직장 선암종(READ), 피부 흑색종(SKCM), 위 선암종(STAD), 고환 생식 세포 종양(TGCT), 갑상선 선암종(THCA), 자궁체부 자궁내막양 암종(UCEC) 또는 자궁 암육종(UCS)일 수 있다.KRAS, a type of RAS protein, is a small GTPases protein that plays an important role in the signal transduction system related to cell differentiation, proliferation, and survival. The RAS protein is well known as an oncogene found as a mutation in various carcinomas, and 85% of RAS-derived carcinomas are known to be caused by KRAS mutations. Therefore, when T cells specifically recognizing KRAS mutations are amplified, cancers with KRAS mutations can be eliminated and treated, or can serve as a vaccine against cancer. The cancer is not limited as long as the cancer has a KRAS mutation, and examples include adrenocortical carcinoma (ACC), bladder urothelial carcinoma (BLCA), breast invasive carcinoma (BRCA), cervical squamous cell carcinoma and cervical adenocarcinoma (CESC), colon Adenocarcinoma (COAD), chronic lymphocytic leukemia (CLL), colorectal cancer (CRC), diffuse large B-cell lymphoma (DLBCL), glioblastoma multiforme (GBM), squamous cell carcinoma of the head and neck (HNSC), chromophobe kidney (KICH) , renal clear cell carcinoma (KIRC), renal papillary cell carcinoma (KIRP), acute myelogenous leukemia (LAML), hepatocellular carcinoma (LIHC), lung adenocarcinoma (LUAD), lung squamous cell carcinoma (LUSC), multiple myeloma (MM) , ovarian serous cystadenocarcinoma (OV), pancreatic adenocarcinoma (PAAD), prostate adenocarcinoma (PRAD), rectal adenocarcinoma (READ), skin melanoma (SKCM), gastric adenocarcinoma (STAD), testicular germ cell tumor (TGCT), thyroid adenocarcinoma (THCA), endometrioid carcinoma of the uterus (UCEC) or uterine carcinosarcoma (UCS).
하기에서 실시예를 통해 본 발명을 상세히 설명한다.In the following, the present invention will be described in detail through examples.
실시예 Example
1. KRAS(WT)의 제조1. Preparation of KRAS (WT)
먼저 KRAS 아미노산 서열(서열번호 2)을 발현벡터에 삽입하였다. KRAS(WT)는 189개의 아미노산으로 이루어져 있으며 아미노산 서열은 하기 표 1과 같다.First, the KRAS amino acid sequence (SEQ ID NO: 2) was inserted into the expression vector. KRAS (WT) consists of 189 amino acids, and the amino acid sequence is shown in Table 1 below.
RKQVVIDGET50 CLLDILDTAG60 QEEYSAMRDQ70 YMRTGEGFLC80
VFAINNTKSF90 EDIHHYREQI100 KRVKDSEDVP110 MVLVGNKCDL120
PSRTVDTKQA130 QDLARSYGIP140 FIETSAKTRQ150 RVEDAFYTLV160
REIRQYRLKK170 ISKEEKTPGC180 VKIKKCIIM189 MTEYKLVVVG 10 AGGVGKSALT 20 IQLIQNHFVD 30 EYDPTIEDSY 40
RKQVVIDGET 50 CLLDILDTAG 60 QEEYSAMRDQ 70 YMRTGEGFLC 80
VFAINNTKSF 90 EDIHHYREQI 100 KRVKDSEDVP 110 MVLVGNKCDL 120
PSRTVDTKQA 130 QDLARSYGIP 140 FIETSAKTRQ 150 RVEDAFYTLV 160
REIRQYRLKK 170 ISKEEKTPGC 180 VKIKKCIIM 189
상기 KRAS-WT를 제한효소로 처리한 후 pET30a 벡터에 넣어 발현벡터를 제조 하였으며 상기 발현벡터는 E.coli에 형질전환하여 단백질을 발현시켰다. After treating the KRAS-WT with a restriction enzyme, an expression vector was prepared by inserting it into a pET30a vector, and the expression vector was transformed into E. coli to express the protein.
2. KRAS(M)-ROP의 제조2. Preparation of KRAS(M)-ROP
KRAS Mutant Recombinant Overlapping Peptide(KRAS(M)-ROP)의 항원을 디자인하고 KRAS(WT)와 동이한 방법으로 발현벡터를 제조하였다. 상기 KRAS(M)-ROP은 KRAS 아미노산 12번째 위치의 G(Glycine)가 D(Asapartic acid)로 변이한 G12D, KRAS 아미노산 12번째 위치의 G(Glycine)가 V(Valine)로 변이한 G12V, 또는 KRAS 아미노산 13번째 위치의 G(Glycine)가 D(Asapartic acid)로 변이한 G13D를 포함한다. An antigen of KRAS Mutant Recombinant Overlapping Peptide (KRAS(M)-ROP) was designed and an expression vector was prepared in the same manner as for KRAS(WT). The KRAS (M)-ROP is G12D in which G (Glycine) at the 12th position of the KRAS amino acid is mutated to D (Asapartic acid), G12V in which G (Glycine) at the 12th position of the KRAS amino acid is mutated to V (Valine), or It includes G13D in which G (Glycine) at the 13th position of KRAS amino acid is mutated to D (Asapartic acid).
상기 KRAS(M)-ROP은 500개의 아미노산 서열을 가지는 것을 특징으로 하며 아미노산이 순차적으로 30개씩 구분되되 하나의 에피토프(epitope)는 15개의 아미노산 서열이 서로 중복되도록 디자인되었다. 표 2는 KRAS(M)-ROP의 아미노산 서열(서열번호 1) 및 KRAS(M)-ROP 에피토프의 아미노산 서열을 보여준다. The KRAS (M) -ROP is characterized by having a sequence of 500 amino acids, and the amino acids are sequentially divided into 30 units, but one epitope is designed such that 15 amino acid sequences overlap with each other. Table 2 shows the amino acid sequence of KRAS(M)-ROP (SEQ ID NO: 1) and the amino acid sequence of KRAS(M)-ROP epitope.
도 1은 본 발명의 KRAS(M)-ROP의 에피토프 구조를 보여준다.1 shows the epitope structure of KRAS(M)-ROP of the present invention.
MTEYKLVVVG44 AVGVGKSALT54 IQLIQNHFVD64 LRMK 68
KSALTIQLIQ78 NHFVDEYDPT88 IEDSYRKQVV98 LRMK 102
EYDPTIEDSY112 RKQVVIDGET122 CLLDILDTAG132 LRMK 136
IDGETCLLDI146 LDTAGQEEYS156 AMRDQYMRTG166 LRMK 170
QEEYSAMRDQ180 YMRTGEGFLC190 VFAINNTKSF200 LRMK 204
EGFLCVFAIN214 NTKSFEDIHH224 YREQIKRVKD234 LRMK 238
EDIHHYREQI248 KRVKDSEDVP258 MVLVGNKCDL268 LRMK 272
SEDVPMVLVG282 NKCDLPSRTV292 DTKQAQDLAR302 LRMK 306
PSRTVDTKQA316 QDLARSYGIP326 FIETSAKTRQ336 LRMK 340
SYGIPFIETS350 AKTRQRVEDA360 FYTLVREIRQ370 LRMK 374
RVEDAFYTLV384 REIRQYRLKK394 ISKEEKTPGC404 LRMK 408
YRLKKISKEE418 KTPGCVKIKK428 CIIM432 LRMK 436
MTEYKLVVVG446 AGDVGKSALT456 IQLIQNHFVD466 LRMK 470
MTEYKLVVVG480 AGGVGKSALT490 IQLIQNHFVD500 MTEYKLVVVG 10 A D GVGKSALT 20 IQLIQNHFVD 30 LRMK 34
MTEYKLVVVG 44 A V GVGKSALT 54 IQLIQNHFVD 64 LRMK 68
KSALTIQLIQ 78 NHFVDEYDPT 88 IEDSYRKQVV 98 LRMK 102
EYDPTIEDSY 112 RKQVVIDGET 122 CLLDILDTAG 132 LRMK 136
IDGETCLLDI 146 LDTAGQEEYS 156 AMRDQYMRTG 166 LRMK 170
QEEYSAMRDQ 180 YMRTGEGFLC 190 VFAINNTKSF 200 LRMK 204
EGFLCVFAIN 214 NTKSFEDIHH 224 YREQIKRVKD 234 LRMK 238
EDIHHYREQI 248 KRVKDSEDVP 258 MVLVGNKCDL 268 LRMK 272
SEDVPMVLVG 282 NKCDLPSRTV 292 DTKQAQDLAR 302 LRMK 306
PSRTVDTKQA 316 QDLARSYGIP 326 FIETSAKTRQ 336 LRMK 340
SYGIPFIETS 350 AKTRQRVEDA 360 FYTLVREIRQ 370 LRMK 374
RVEDAFYTLV 384 REIRQYRLKK 394 ISKEEKTPGC 404 LRMK 408
YRLKKISKEE 418 KTPGCVKIKK 428 CIIM 432 LRMK 436
MTEYKLVVVG 446 AG D VGKSALT 456 IQLIQNHFVD 466 LRMK 470
MTEYKLVVVG 480 AGGVGKSALT 490 IQLIQNHFVD 500
(서열번호는 KRAS WT을 기준으로 부여하였음) amino acid sequence
(Sequence numbers were assigned based on KRAS WT)
상기 KRAS-ROP(M)은 합성한 후(Genescript Co. Ltd.) pET30a 벡터에 클로닝(cloning)하였으며 E.coli에 형질전환하여 발현시켰다. 발현된 단백질은 APC(Activated protein C)를 이용하여 절단하는 방법으로 KRAS(M)-ROP을 제조하였다. The KRAS-ROP(M) was synthesized (Genescript Co. Ltd.), cloned into a pET30a vector, and then transformed into E.coli and expressed. KRAS(M)-ROP was prepared by cleaving the expressed protein using activated protein C (APC).
3. KRAS(M)-ROP 반응성 스크리닝 분석3. KRAS(M)-ROP Reactivity Screening Assay
정상인의 말초 혈액 단핵세포 (peripheral blood mononuclear cell, PBMC)에서 KRAS(M)-ROP의 반응성을 스크리닝 하였다. 상기 스크리닝은 고착화효소항체법(enzyme-linked immune absorbent spot assay, ELISpot assay)을 이용하였다. The reactivity of KRAS(M)-ROP was screened in peripheral blood mononuclear cells (PBMC) of normal subjects. The screening was performed using enzyme-linked immune absorbent spot assay (ELISpot assay).
도 2는 본 발명의 KRAS(M)-ROP에 대한 PBMC의 반응성을 분석한 결과를 보여준다. 패널 A는 ELISpot(IFN-γ) assay의 SFC 이미지를 보여주며 패널 B는 ELISpot(IFN-γ) assay의 SFC 그래프를 보여준다. Figure 2 shows the results of analyzing the reactivity of PBMC to KRAS (M) -ROP of the present invention. Panel A shows the SFC image of the ELISpot (IFN-γ) assay and panel B shows the SFC graph of the ELISpot (IFN-γ) assay.
먼저 정상인 자원자의 백혈구분반술에서 얻어진 PBMC(LP-1 PBMC, LP-4 PBMC, 및 LP-6 PBMC) 1x105cell을 파종(seeding)하여 세포배양한 후 항원을 처리하였다. 상기 항원으로 KRAS(M)-ROP 5㎍/㎖, 1.0㎍/㎖, 0.1㎍/㎖을 사용하였으며 양성대조군(positive control)로서 anti-CD3를 사용하였다. 세포배양은 37℃, CO2 5%, overnight(O/N)의 조건으로 수행하였으며 배양한 세포는 IFN-γ로 염색하여 SFC(Spot Forming Cell)를 읽어 분석하였다. 실험결과 정상인 PBMC중 LP-1에서 KRAS(M)-ROP에 대한 반응성이 가장 우수한 것으로 확인되었다. First, 1x10 5 cells of PBMC (LP-1 PBMC, LP-4 PBMC, and LP-6 PBMC) obtained from leukocyte division of normal volunteers were seeded, cultured, and treated with antigen. As the antigen, 5 μg/ml, 1.0 μg/ml, and 0.1 μg/ml of KRAS(M)-ROP were used, and anti-CD3 was used as a positive control. Cell culture was performed under conditions of 37°C, 5% CO 2 , overnight (O/N), and the cultured cells were stained with IFN-γ and analyzed by reading SFC (Spot Forming Cell). As a result of the experiment, it was confirmed that the reactivity to KRAS(M)-ROP was the best in LP-1 among normal PBMCs.
4. KRAS(M)-ROP 농도별 특이적 CD3+ T 세포 비율 분석4. Analysis of specific CD3+ T cell ratio by KRAS(M)-ROP concentration
상기 LP-1 PBMC에 대하여 KRAS(M)-ROP 농도에 따른 KRAS(M)-ROP 특이적 CD3+ T세포 비율을 분석하였다. 이를 위하여 LP-1 PBMC에 항원을 처리한 후 IFN-γ capture staining을 수행하고 이를 분석하였다. The ratio of KRAS(M)-ROP-specific CD3+ T cells according to the KRAS(M)-ROP concentration was analyzed for the LP-1 PBMCs. To this end, IFN-γ capture staining was performed after antigen treatment on LP-1 PBMCs, and this was analyzed.
도 3은 본 발명의 KRAS(M)-ROP 농도에 따른 LP-1 PBMC의 KRAS(M)-ROP 특이적 CD3+ T 세포 비율을 분석한 결과를 보여준다. 패널 A는 ELISpot(IFN-γ) assay의 조건별 SFC 이미지를 보여주며 패널 B는 ELISpot(IFN-γ) assay의 조건별 SFC 그래프를 보여준다. 패널 C는 IFN-γ capture staining의 원리 빛 방법을 보여주며 패널 D는 IFN-γ capture FACS 분석결과를 보여준다. 패널 E는 IFN-γ 분비 CD3+ T 세포 비율(%) 그래프를 보여준다.Figure 3 shows the results of analyzing the ratio of KRAS (M) -ROP-specific CD3+ T cells in LP-1 PBMC according to the concentration of KRAS (M) -ROP of the present invention. Panel A shows the SFC image for each condition of the ELISpot (IFN-γ) assay, and Panel B shows the SFC graph for each condition of the ELISpot (IFN-γ) assay. Panel C shows the principle light method of IFN-γ capture staining, and Panel D shows the results of IFN-γ capture FACS analysis. Panel E shows a graph of the percentage (%) of IFN-γ secreting CD3+ T cells.
먼저 LP-1 PBMC 1x106cell을 파종(seeding)하여 세포배양한 후 농도를 달리하여 항원(KRAS(M)-ROP 5㎍/㎖, KRAS(M)-ROP 1.0㎍/㎖, KRAS(M)-ROP 0.1㎍/㎖)을 처리하였다. 또한 파상풍 백신(Tetanus toxoid vaccine, TTX)을 5㎍/㎖, 1.0㎍/㎖으로 처리한 LP-1 PBMC과 anti-CD3를 양성대조군(positive control)으로 사용하였다. 세포배양은 37℃, CO2 5%, overnight(O/N)의 조건으로 수행하였다. First, LP-1 PBMC 1x10 6 cells were seeded and cultured, and then antigens (KRAS(M)-ROP 5μg/ml, KRAS(M)-ROP 1.0μg/ml, KRAS(M) -ROP 0.1 μg/ml) was treated. In addition, LP-1 PBMC treated with tetanus toxoid vaccine (TTX) at 5 μg/ml and 1.0 μg/ml and anti-CD3 were used as positive controls. Cell culture was performed under conditions of 37°C, 5% CO 2 , and overnight (O/N).
IFN-γ capture staining은 항원이 처리된 LP-1 PBMC에 1차 포획 항체(1st capture antibody)를 처리한 후 37℃에서 45분간 배양하고 2차 검출 항체(2nd detection andtibody)와 CD3, CD4, CD8, 및 CD137을 처리하는 방법으로 수행하였다. 상기 IFN-γ capture staining이 수행된 LP-1 PBMC는 세포자동해석분리장치(Fluorescence activated cell sorter, FACS)를 이용하여 세포특성을 분석하였다.For IFN-γ capture staining, antigen-treated LP-1 PBMC was treated with 1st capture antibody, then incubated at 37°C for 45 minutes, and secondary detection antibody ( 2nd detection andtibody) and CD3, CD4 , CD8, and CD137. Cell characteristics of the LP-1 PBMCs subjected to the IFN-γ capture staining were analyzed using a Fluorescence activated cell sorter (FACS).
실험결과 LP-1 PBMC에 농도에 따라 항원을 처리하게 되면 KRAS(M)-ROP 특이적 CD2+ T 세포 비율이 증가하는 것이 확인되었으며 이는 상기 ELISpot(IFN-g) 결과와 잘 일치하였다. 따라서 LP-1 PBMC의 반응성은 KRAS(M)-ROP에 농도 의존적으로 증가하는 것으로 판단된다. 또한 LP-1 PBMC에 KRAS(M)-ROP에 대한 반응성을 정량적으로 평가한 결과 KRAS(M)-ROP 5㎍/㎖을 처리하는 경우 KRAS(M)-ROP 특이 CD3+ T 세포의 비율이 2.4% 수준인 것으로 확인되었다.As a result of the experiment, it was confirmed that the ratio of KRAS(M)-ROP-specific CD2+ T cells increased when LP-1 PBMCs were treated with the antigen according to the concentration, which was in good agreement with the ELISpot (IFN-g) result. Therefore, it is believed that the reactivity of LP-1 PBMC increases in a concentration-dependent manner to KRAS(M)-ROP. In addition, as a result of quantitatively evaluating the reactivity to KRAS(M)-ROP in LP-1 PBMC, the ratio of KRAS(M)-ROP-specific CD3+ T cells was 2.4% when 5 μg/ml of KRAS(M)-ROP was treated. level was confirmed.
5. 항원의 종류에 따른 항원 특이적 CD3+ T 세포 비율 비교 분석5. Comparative analysis of the ratio of antigen-specific CD3+ T cells according to the type of antigen
LP-1 PBMC에 KRAS(M)-ROP(500aa), KRAS1-24Wild-type(Peptide Wt, 24aa), 또는 KRAS1-24돌연변이(24aa)를 처리 한 후 항원 특이적 CD3+ T 세포 비율을 비교 분석하였다. LP-1 PBMC were treated with KRAS(M)-ROP (500aa), KRAS 1-24 Wild-type (Peptide Wt, 24aa), or KRAS 1-24 mutant (24aa), and then the ratio of antigen-specific CD3+ T cells was evaluated. Comparative analysis was performed.
도 4는 본 발명의 KRAS(M)-ROP, KRAS1-24Wild-type, 및 KRAS1-24돌연변이에 대한 LP-1 PBMC의 항원 특이적 CD3+ T-세포 비율을 분석한 결과를 보여준다. 패널 A는 KRAS(M)-ROP, KRAS1-24Wild-type, 및 KRAS1-24돌연변이가 처리된 LP-1 PBMC의 IFN-γ capture FACS 분석결과를 보여준다. 패널 B는 IFN-γ 분비 CD3+ T 세포 비율(%) 그래프를 보여주며, 패널 C는 항원 특이 CD3+ T 세포 비율(%) 그래프를 표로 정리한 결과를 보여준다. No Ag는 실행기(effector)만을 사용한 것을 의미하며, @CD3는 양성대조군(positive control)로서 anti-CD3를 사용한 것을 의미한다.Figure 4 shows the results of analyzing the ratio of antigen-specific CD3+ T-cells of LP-1 PBMCs against KRAS(M)-ROP, KRAS 1-24 Wild-type, and KRAS 1-24 mutants of the present invention. Panel A shows the results of IFN-γ capture FACS analysis of KRAS(M)-ROP, KRAS 1-24 Wild-type, and KRAS 1-24 mutant-treated LP-1 PBMCs. Panel B shows a graph of IFN-γ-secreting CD3+ T cell ratio (%), and panel C shows the graph of antigen-specific CD3+ T cell ratio (%) tabulated. No Ag means that only the effector was used, and @CD3 means that anti-CD3 was used as a positive control.
상기 KRAS1-24돌연변이는 KRAS1-24Wild-type에서 12번째 아미노산인 G가 D, 또는 V로 치환되거나 12번째 아미노산인 G가 D된 것(Pep.G12D, Pep.G12V, Pep.G13D)을 의미한다. 항원 특이적 CD3+ T-세포 비율은 상기와 동일한 방법으로 분석하였으며 항원으로 KRAS(M)-ROP(500aa), Peptide Wt, Pep.G12D, Pep.G12V, 및 Pep.G13D를 사용하였다. The KRAS 1-24 mutation is a KRAS 1-24 Wild-type in which G, the 12th amino acid, is substituted with D or V, or G, the 12th amino acid, is replaced with D (Pep.G12D, Pep.G12V, Pep.G13D). means The ratio of antigen-specific CD3+ T-cells was analyzed in the same manner as above, and KRAS(M)-ROP(500aa), Peptide Wt, Pep.G12D, Pep.G12V, and Pep.G13D were used as antigens.
실험결과 Peptide Wt에 반응한 CD+ T세포는 확인되지 않았으며 Pep.G12D, Pep.G12V, 및 Pep.G13D에 반응한 CD3+ T 세포 역시 0.31%(Pep.G12D), 0.11%(Pep.G12V) 및 0.25%(Pep.G13D)로 현저히 낮은 것을 확인되었다. 상기 결과는 KRAS(M)-ROP에 반응하여 유도된 CD3+ T 세포의 비율이 2.41%임을 감안할 때 24개의 아미노산으로 구성된 펩타이드인 에피토프만으로는 항원 특이 CD3+ T 세포의 유도가 미미하다는 것을 의미한다. As a result of the experiment, CD+ T cells that responded to Peptide Wt were not confirmed, and CD3+ T cells that responded to Pep.G12D, Pep.G12V, and Pep.G13D were also 0.31% (Pep.G12D), 0.11% (Pep.G12V) and It was confirmed that it was remarkably low at 0.25% (Pep.G13D). The above results indicate that the induction of antigen-specific CD3+ T cells is insignificant with only the epitope, which is a peptide composed of 24 amino acids, considering that the ratio of CD3+ T cells induced in response to KRAS(M)-ROP is 2.41%.
6. KRAS(M)-ROP 및 Fast-IVS를 이용한 ROP-T 세포의 제조6. Preparation of ROP-T cells using KRAS(M)-ROP and Fast-IVS
상기 실험결과를 바탕으로 KRAS(M)-ROP에 반응하는 CD3+ T 세포(ROP-T 세포)를 제조하였다. 본 발명에서는 Fast-IVS(Fast-In vitro Stimulation)을 적용하여 ROP-T 세포를 제조하였다. Based on the above experimental results, CD3+ T cells (ROP-T cells) responding to KRAS(M)-ROP were prepared. In the present invention, ROP-T cells were prepared by applying Fast-IVS (Fast-In vitro Stimulation).
도 5는 본 발명의 Fast-IVS 공정과 No-Cytokine 공정을 비교한 결과를 보여준다. 패널 A는 Fast-IVS를 이용한 ROP-T 세포의 제조공정 및 평가 과정 및 ROP-T 세포의 특성 분석 과정을 보여준다. 패널 B는 Fast-IVS 공정 조건과 No-Cytokine 공정 조건에서 증폭된 T 세포의 IFNg+ CD3+ T 세포 비율을 비교한 결과를 보여준다.Figure 5 shows the results of comparing the Fast-IVS process and the No-Cytokine process of the present invention. Panel A shows the manufacturing process and evaluation process of ROP-T cells using Fast-IVS, and the characterization process of ROP-T cells. Panel B shows the result of comparing the IFNg+ CD3+ T cell ratio of T cells expanded under the Fast-IVS process condition and the No-Cytokine process condition.
상기 Fast-IVS 공정은 항원을 이용하여 항원 특이적 CD3+ T 세포를 유도하는 것과 싸이토카인을 처리하여 세포 증폭(Cell Expansion)을 수행하는 공정을 동시에 수행하는 것을 특징으로 한다. 이에 반하여 상기 No-Cytokine 공정은 항원에 의해 유도된 항원 특이적 CD3+ T 세포에 대하여 싸이토카인을 처리하지 않고 세포 증폭을 수행하는 것을 특징으로 한다. The Fast-IVS process is characterized in that a process of inducing antigen-specific CD3+ T cells using an antigen and a process of performing cell expansion by treating cytokines are performed at the same time. In contrast, the No-Cytokine process is characterized in that cell amplification is performed without treating antigen-specific CD3+ T cells with cytokines.
상기 Fast-IVS 공정의 세포 증폭에 사용한 싸이토카인(cytokine)은 인터루킨-4(Interleukin-4, IL-4), 과립구 대식세포 콜로니 자극 인자(Granulocyte-Macrophage Colony-Stimulating Factor, GM-CSF), 종양괴사인자-α(Tumor Necrosis Factor-α, TNF-α), 인터루킨-1b(Interleukin-1β, IL-1β) 및 프로스타글란딘 E2(Prostaglandin E2, PGE2)이다. The cytokines used for cell amplification in the Fast-IVS process include Interleukin-4 (IL-4), Granulocyte-Macrophage Colony-Stimulating Factor (GM-CSF), and tumor necrosis. They are Tumor Necrosis Factor-α (TNF-α), Interleukin-1β (IL-1β), and Prostaglandin E2 (PGE2).
하기 표 3은 본 발명의 Fast-IVS 공정과 No-Cytokine 공정을 보여준다.Table 3 below shows the Fast-IVS process and the No-Cytokine process of the present invention.
분석결과 Fast-IVS 공정에서 No-Cytokine 공정보다 IFN-γ을 분비하는 항원 특이적 CD3+ T 세포 비율이 4배가량 더 많이 증폭된 것이 확인되었다.As a result of the analysis, it was confirmed that the ratio of antigen-specific CD3+ T cells secreting IFN-γ was amplified about 4 times more in the Fast-IVS process than in the No-Cytokine process.
7. ROP-T 세포 제조용 Fast-IVS 공정의 최적화7. Optimization of the Fast-IVS process for manufacturing ROP-T cells
KRAS(M)-ROP의 처리 농도 및 Fast-IVS 공정조건을 변경하여 ROP-T 세포 제조용 Fast-IVS 공정을 최적화하였다. 하기 표 4는 Fast-IVS 공정의 최적화를 위한 실시예를 보여준다.The Fast-IVS process for preparing ROP-T cells was optimized by changing the treatment concentration of KRAS(M)-ROP and Fast-IVS process conditions. Table 4 below shows examples for optimization of the Fast-IVS process.
실험결과 모든 실시예에서 ROP-T 세포가 증폭된 것이 확인되었으며 최적의 Fast-IVS 공정은 KRAS(M)-ROP의 처리 농도 1.0㎍/㎖ 및 Fast-IVS 기간 7일 인 것으로 확인되었다.As a result of the experiment, it was confirmed that ROP-T cells were amplified in all examples, and it was confirmed that the optimal Fast-IVS process was KRAS(M)-ROP treatment concentration of 1.0 μg/ml and Fast-IVS period of 7 days.
8. ROP-T 세포 특성 분석8. ROP-T cell characterization
KRAS 돌연변이 에피토프(epitope) 스크리닝을 수행하여 증폭된 ROP-T 세포의 특성을 분석하였다. 이를 위하여 PBMC로부터 자가 수지상세포(Autologous Dendritic Cell)를 유도하고 상기 자가 수지상세포에 항원을 감작시켜 항원 특이적인 T 세포를 자극할 수 있는 항원 감작수지상 세포(Antigen pulsed Dendritic Cell, Ag pulsed DC)를 제조하여 ROP-T 세포의 반응성을 확인하였다. 상기 반응성은 재자극 IFN-γ 분비 T 세포 비율(Re-stimulation IFN-g secretion T frequency)(%)을 산출하여 분석하였다. KRAS mutant epitope screening was performed to characterize the amplified ROP-T cells. To this end, autologous dendritic cells are induced from PBMC, and antigen pulsed dendritic cells (Ag pulsed DC) capable of stimulating antigen-specific T cells are prepared by sensitizing the autologous dendritic cells with an antigen. Thus, the reactivity of ROP-T cells was confirmed. The reactivity was analyzed by calculating the re-stimulation IFN-g secretion T frequency (%).
도 6은 본 발명의 ROP-T 세포에 대한 KRAS 돌연변이 에피토프 스크리닝 결과를 보여준다. 패널 A는 IFG-γ+, CD3+, CD4+에 대한 FACS 분석결과를 보여준다. 패널 B는 조건 별 재자극 IFN-γ 분비 T 세포 비율의 세포 비율(%)을 분석한 결과를 보여준다. Figure 6 shows the results of KRAS mutant epitope screening for ROP-T cells of the present invention. Panel A shows the results of FACS analysis for IFG-γ+, CD3+, and CD4+. Panel B shows the result of analyzing the cell ratio (%) of the restimulation IFN-γ secreting T cell ratio for each condition.
먼저 자가 수지상세포(Autologous DC)를 4일간 배양하고 항원에 감작시켜 Ag pulsed DC를 준비하였다. 상기 Ag pulsed DC는 96well에 5x103cells/100㎕으로 분주하였다. KRAS(M)-ROP 특이 CD3+ T 세포를 상기 96well에 1x105cells/100㎕가 되도록 분주하되 상기 Ag pulsed DC와 KRAS(M)-ROP 특이 CD3+ T 세포의 세포수가 1:20의 비율이 되도록 하였다. Ag pulsed DC와 KRAS(M)-ROP 특이 CD3+ T 세포가 혼합된 배지는 4시간동안 배양하였다. 상기 FACS를 이용하여 배양된 세포들의 CD3+, CD4+, CD137+, IFN-γ cap, 및 IFN-γ 분비 T 세포 비율(%)을 분석하였다. 상기 Ag pulsed DC의 제조에 사용한 항원은 KRAS(M)-ROP(500aa)(ROP_DC), KRAS1-24wild type peptide(WT_DC), KRAS1-24G12D mutant peptide(G12D_DC), KRAS1-24G12V mutant peptide(G12V_DC), 및 KRAS1-24G13D mutant peptide(G13D_DC)이었다. 또한 비교를 위하여 항원(Ag) 없이 실행기(effector)만을 사용한 DC(NoAg_DC)를 사용하였다. First, autologous DCs were cultured for 4 days and Ag pulsed DCs were prepared by sensitizing them to an antigen. The Ag pulsed DC was dispensed at 5x10 3 cells/100 μl in 96 well. KRAS(M)-ROP-specific CD3+ T cells were dispensed into the 96 well to be 1x10 5 cells/100 μl, but the Ag pulsed DC and KRAS(M)-ROP-specific CD3+ T cells were dispensed at a ratio of 1:20. . Medium mixed with Ag pulsed DC and KRAS(M)-ROP-specific CD3+ T cells was cultured for 4 hours. CD3+, CD4+, CD137+, IFN-γ cap, and IFN-γ secreting T cell ratios (%) of the cultured cells were analyzed using the FACS. Antigens used in the preparation of the Ag pulsed DC were KRAS (M)-ROP (500aa) (ROP_DC), KRAS 1-24 wild type peptide (WT_DC), KRAS 1-24 G12D mutant peptide (G12D_DC), KRAS 1-24 G12V mutant peptide (G12V_DC), and KRAS 1-24 G13D mutant peptide (G13D_DC). Also, for comparison, DC (NoAg_DC) using only an effector without an antigen (Ag) was used.
실험결과 ROP_DC를 사용하여 재자극한 경우 CD3+ ROP-T 세포에 존재하는 KRAS(M)-ROP 특이 CD3+/CD4+ T 세포와 KRAS(M)-ROP 특이 CD3+/CD8+ T 세포의 비율(%)이 각각 10% 및 5%인 것이 확인되었다. G12D_DC를 사용하여 재자극한 경우 CD3+ ROP-T 세포에 존재하는 KRAS(M)-ROP 특이 CD3+/CD4+ T 세포와 KRAS(M)-ROP 특이 CD3+/CD8+ T 세포의 비율(%)이 각각 1.5% 및 0.5%인 것이 확인되었다. G13D_DC를 사용하여 재자극한 경우 CD3+ ROP-T 세포에 존재하는 KRAS(M)-ROP 특이 CD3+/CD4+ T 세포와 KRAS(M)-ROP 특이 CD3+/CD8+ T 세포의 비율(%)이 각각 3.0% 및 1.5%인 것이 확인되었다. 이에 반하여 Wt_DC 및 G12V_DC를 사용하여 재자극한 경우 KRAS(M)-ROP 특이 CD3+/CD4+ T 세포와 KRAS(M)-ROP 특이 CD3+/CD8+ T 세포가 거의 검출되지 않았다.As a result of the experiment, the ratio (%) of KRAS(M)-ROP-specific CD3+/CD4+ T cells and KRAS(M)-ROP-specific CD3+/CD8+ T cells in CD3+ ROP-T cells when restimulated with ROP_DC was 10% and 5% were confirmed. When restimulated with G12D_DC, the percentages (%) of KRAS(M)-ROP-specific CD3+/CD4+ T cells and KRAS(M)-ROP-specific CD3+/CD8+ T cells in CD3+ ROP-T cells were 1.5%, respectively. and 0.5%. When restimulated with G13D_DC, the percentages of KRAS(M)-ROP-specific CD3+/CD4+ T cells and KRAS(M)-ROP-specific CD3+/CD8+ T cells in CD3+ ROP-T cells were 3.0%, respectively. and 1.5%. In contrast, when restimulation using Wt_DC and G12V_DC, KRAS(M)-ROP-specific CD3+/CD4+ T cells and KRAS(M)-ROP-specific CD3+/CD8+ T cells were hardly detected.
9. ROP-T 세포의 HLA 제한 분석9. HLA restriction assay of ROP-T cells
유도된 ROP-T 중 KRAS G13D mutant 특이 T 세포의 HLA 제한(restriction)을 확인하기 위해 인간 백혈구 항원(Human leukocyte antigen DQ, HLA-DQ) 에세이를 수행하였다. In order to confirm the HLA restriction of KRAS G13D mutant-specific T cells among the induced ROP-T, a human leukocyte antigen DQ (HLA-DQ) assay was performed.
도 7은 본 발명의 HLA-DQ blocking 에세이 결과를 보여준다.7 shows the results of the HLA-DQ blocking assay of the present invention.
먼저 항원을 감작시킨 DC(Ag pulsed DC)를 제조하였다. 상기 Ag pulsed DC의 제조에 사용한 항원은 KRAS(M)-ROP(500aa)(ROP_DC), KRAS1-24wild type peptide(WT_DC), KRAS1-24G12D mutant peptide(G12D_DC), KRAS1-24G12V mutant peptide(G12V_DC), 및 KRAS1-24G13D mutant peptide(G13D_DC)이었다. 상기 제조한 Ag pulsed DC에 대하여 1시간동안 HLA-DQ 항체로 처리하는 방법으로 HLA-DQ blocking을 실시하였다. HLA-DQ blocking된 Ag pulsed DC를 이용하여 ROP-T를 재자극(re-stimulation)한 후 FACS 분석을 통해 IFN-g+, CD3+, CD4+를 분석하였다. First, antigen-primed DC (Ag pulsed DC) was prepared. Antigens used in the preparation of the Ag pulsed DC were KRAS (M)-ROP (500aa) (ROP_DC), KRAS 1-24 wild type peptide (WT_DC), KRAS 1-24 G12D mutant peptide (G12D_DC), KRAS 1-24 G12V mutant peptide (G12V_DC), and KRAS 1-24 G13D mutant peptide (G13D_DC). HLA-DQ blocking was performed by treating the prepared Ag pulsed DC with an HLA-DQ antibody for 1 hour. After re-stimulation of ROP-T using HLA-DQ blocked Ag pulsed DC, IFN-g+, CD3+, and CD4+ were analyzed by FACS analysis.
분석결과 항원 비특이 T 세포(NoAg-T)은 재자극에 사용한 DC의 종류 및 상기 DC에 대한 HLA-DQ blocking의 여부에 상관없이 IFN-γ를 분비하는 CD3+CD4+ T 세포의 비율이 미미한 것으로 확인되었다. 이에 반하여 ROP-T 세포는 ROP_DC를 사용하여 재자극하게 되면 DC에 대한 HLA-DQ blocking 여부에 상관없이 IFN-γ를 분비하는 CD3+CD4+ T 세포의 비율이 15% 이상으로 증가하는 것으로 확인되었다. 또한 ROP-T 세포는 HLA-DQ blocked G13D_DC를 이용하여 재자극을 수행한 경우 IFN-γ를 분비하는 CD3+CD4+ T 세포의 비율이 HLA-DQ unblocked G13D_DC를 사용하여 재자극한 경우에 대비하여 6% 가량 감소(7% →1%)하는 것이 확인 되었다.As a result of the analysis, antigen-specific T cells (NoAg-T) showed that the ratio of CD3+CD4+ T cells secreting IFN-γ was insignificant, regardless of the type of DC used for restimulation and whether or not HLA-DQ blocking was performed on the DC. Confirmed. On the other hand, when ROP-T cells were re-stimulated using ROP_DC, it was confirmed that the ratio of CD3+CD4+ T cells secreting IFN-γ increased to 15% or more regardless of HLA-DQ blocking for DC. In addition, ROP-T cells, when restimulation was performed using HLA-DQ blocked G13D_DC, the ratio of CD3+CD4+ T cells secreting IFN-γ was 6 in preparation for restimulation using HLA-DQ unblocked G13D_DC. % reduction (7% → 1%) was confirmed.
결과적으로 본 발명의 ROP-T 세포는 ROP 항원에 특이적이며 HLA-DQ에 제한적이며 G13D 돌연변이에 특이성을 보이는 CD4+ T 세포의 증폭을 유도하는 것으로 판단된다.As a result, it is determined that the ROP-T cells of the present invention induce the expansion of CD4+ T cells that are specific for the ROP antigen, restrictive for HLA-DQ, and show specificity for the G13D mutation.
10. 대조군 native KRAS-T 세포와 peptide mix-T 세포의 비교10. Comparison of control native KRAS-T cells and peptide mix-T cells
KRAS(M)-ROP의 KRAS 돌연변이에 대한 특이적인 반응 유도를 검증하였다. The specific response induction of KRAS(M)-ROP to KRAS mutation was verified.
도 8은 본 발명의 조건별 IFN-γ를 분비(IFN-γ+)하는 CD3+ T 세포의 비율을 보여준다. 먼저 KRAS(M)-ROP 또는 native KRAS(189aa)을 항원으로 사용하는 Fast-IVS 공정을 이용하여 T 세포를 유도하였다. 또한 KRAS1-24wild type 펩타이드, KRAS1-24G12D 펩타이드, KRAS1-24G12V 펩타이드, 및 KRAS1-24G13D 펩타이드 혼합물을 항원으로 사용하는 Fast-IVS 공정을 이용하여 T 세포를 유도하였다. 대조군으로는 항원없이 실행기만을 사용하는 Fast-IVS 공정을 이용하여 T 세포를 유도하였다. 상기 유도한 T 세포는 ROP_DC를 이용하여 재자극하고 FACS를 이용하여 IFN-γ+ CD3+ T 세포의 비율을 분석하였다.Figure 8 shows the ratio of CD3+ T cells secreting IFN-γ (IFN-γ+) for each condition of the present invention. First, T cells were induced using the Fast-IVS process using KRAS(M)-ROP or native KRAS(189aa) as an antigen. In addition, T cells were induced using the Fast-IVS process using a mixture of KRAS 1-24 wild type peptide, KRAS 1-24 G12D peptide, KRAS 1-24 G12V peptide, and KRAS 1-24 G13D peptide as antigens. As a control, T cells were induced using the Fast-IVS process using only the effector without antigen. The induced T cells were re-stimulated using ROP_DC and the percentage of IFN-γ+ CD3+ T cells was analyzed using FACS.
하기 표 5는 KRAS(M)-ROP의 KRAS 돌연변이에 대한 특이적인 반응 유도 검증 실험방법을 보여준다. 하기 표 5에 있어서 KRAS epitope wild type은 Native KRAS1-24(24aa)를 의미하며; KRAS epitope G12D는 KRAS1-24G12D(24aa)를 의미하며; KRAS epitope G12V는 KRAS1-24G12V(24aa)를 의미하며; KRAS epitope G13D는 KRAS1-24G13D(24aa)를 의미한다.Table 5 below shows an experimental method for verifying the induction of a specific reaction of KRAS (M) -ROP to a KRAS mutation. In Table 5 below, KRAS epitope wild type means Native KRAS 1-24 (24aa); KRAS epitope G12D refers to KRAS 1-24 G12D (24aa); KRAS epitope G12V refers to KRAS 1-24 G12V (24aa); KRAS epitope G13D refers to KRAS 1-24 G13D (24aa).
D+1:TNF-a, IL-1b, PGE2D0:IL-4, GM-CSF
D+1: TNF-a, IL-1b, PGE2
실험결과 항원을 사용하지 않고 Fast-IVS를 통해 유도한 T 세포(No Ag-T)의 경우 IFN-γ+ CD3+ T 세포의 비율이 8% 수준인 것으로 확인되었다. KRAS(M)-ROP을 항원으로 사용하는 Fast-IVS 공정을 통해 유도한 T 세포(ROP-T)의 경우 IFN-γ+ CD3+ T 세포의 비율이 37.4%에 달하는 것으로 확인되었다. Native KRAS를 항원으로 사용하는 Fast-IVS 공정을 통해 유도한 T 세포(WT-T)의 경우 IFN-γ+ CD3+ T 세포의 비율이 18.4% 수준인 것으로 확인되었다. KRAS1-24wild type 펩타이드, KRAS1-24G12D 펩타이드, KRAS1-24G12V 펩타이드, 및 KRAS1-24G13D 펩타이드 혼합물을 항원으로 사용하는 Fast-IVS 공정을 통해 유도한 T 세포(Pep_T)의 경우 IFN-γ+ CD3+ T 세포의 비율이 19.0% 수준인 것으로 확인되었다. As a result of the experiment, in the case of T cells (No Ag-T) induced through Fast-IVS without using an antigen, it was confirmed that the ratio of IFN-γ+ CD3+ T cells was 8%. In the case of T cells (ROP-T) induced through the Fast-IVS process using KRAS(M)-ROP as an antigen, it was confirmed that the ratio of IFN-γ+ CD3+ T cells reached 37.4%. In the case of T cells (WT-T) induced through the Fast-IVS process using native KRAS as an antigen, the ratio of IFN-γ+ CD3+ T cells was confirmed to be 18.4%. In the case of T cells (Pep_T) induced through the Fast-IVS process using a mixture of KRAS 1-24 wild type peptide, KRAS 1-24 G12D peptide, KRAS 1-24 G12V peptide, and KRAS 1-24 G13D peptide as antigens It was confirmed that the ratio of IFN-γ+ CD3+ T cells was at the level of 19.0%.
정리하면 KRAS(M)-ROP 항원이 Native KRAS 또는 KRAS 돌연변이를 포함하는 에피토프를 사용하는 것보다 2배 가량 우수한 IFN-γ+ CD3+ T 세포 유도 효과가 있는 것으로 판단된다.In summary, it is judged that the KRAS(M)-ROP antigen has an IFN-γ+ CD3+ T cell induction effect that is about twice as good as that using native KRAS or an epitope containing a KRAS mutation.
본 명세서에서 설명된 구체적인 실시예는 본 발명의 바람직한 구현예 또는 예시를 대표하는 의미이며, 이에 의해 본 발명의 범위가 한정되지는 않는다. 본 발명의 변형과 다른 용도가 본 명세서 특허청구범위에 기재된 발명의 범위로부터 벗어나지 않는다는 것은 당업자에게 명백하다. Specific examples described in this specification are meant to represent preferred embodiments or examples of the present invention, and the scope of the present invention is not limited thereby. It will be apparent to those skilled in the art that variations and other uses of the present invention do not depart from the scope of the invention described in the claims.
<110> MYONGJI HOSPITAL, MYONGJI MEDICAL FOUNDATION <120> Manufacturing Method of KRAS Specific Activated Cell Using KRAS Antigen Composition <130> MP21-0069 <160> 2 <170> KoPatentIn 3.0 <210> 1 <211> 500 <212> PRT <213> Artificial Sequence <220> <223> KRAS Antigen for KRAS Specific Activated Cell <400> 1 Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Asp Gly Val Gly Lys 1 5 10 15 Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp Leu Arg 20 25 30 Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Val Gly Val 35 40 45 Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp 50 55 60 Leu Arg Met Lys Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His 65 70 75 80 Phe Val Asp Glu Tyr Asp Pro Thr Ile Glu Asp Ser Tyr Arg Lys Gln 85 90 95 Val Val Leu Arg Met Lys Glu Tyr Asp Pro Thr Ile Glu Asp Ser Tyr 100 105 110 Arg Lys Gln Val Val Ile Asp Gly Glu Thr Cys Leu Leu Asp Ile Leu 115 120 125 Asp Thr Ala Gly Leu Arg Met Lys Ile Asp Gly Glu Thr Cys Leu Leu 130 135 140 Asp Ile Leu Asp Thr Ala Gly Gln Glu Glu Tyr Ser Ala Met Arg Asp 145 150 155 160 Gln Tyr Met Arg Thr Gly Leu Arg Met Lys Gln Glu Glu Tyr Ser Ala 165 170 175 Met Arg Asp Gln Tyr Met Arg Thr Gly Glu Gly Phe Leu Cys Val Phe 180 185 190 Ala Ile Asn Asn Thr Lys Ser Phe Leu Arg Met Lys Glu Gly Phe Leu 195 200 205 Cys Val Phe Ala Ile Asn Asn Thr Lys Ser Phe Glu Asp Ile His His 210 215 220 Tyr Arg Glu Gln Ile Lys Arg Val Lys Asp Leu Arg Met Lys Glu Asp 225 230 235 240 Ile His His Tyr Arg Glu Gln Ile Lys Arg Val Lys Asp Ser Glu Asp 245 250 255 Val Pro Met Val Leu Val Gly Asn Lys Cys Asp Leu Leu Arg Met Lys 260 265 270 Ser Glu Asp Val Pro Met Val Leu Val Gly Asn Lys Cys Asp Leu Pro 275 280 285 Ser Arg Thr Val Asp Thr Lys Gln Ala Gln Asp Leu Ala Arg Leu Arg 290 295 300 Met Lys Pro Ser Arg Thr Val Asp Thr Lys Gln Ala Gln Asp Leu Ala 305 310 315 320 Arg Ser Tyr Gly Ile Pro Phe Ile Glu Thr Ser Ala Lys Thr Arg Gln 325 330 335 Leu Arg Met Lys Ser Tyr Gly Ile Pro Phe Ile Glu Thr Ser Ala Lys 340 345 350 Thr Arg Gln Arg Val Glu Asp Ala Phe Tyr Thr Leu Val Arg Glu Ile 355 360 365 Arg Gln Leu Arg Met Lys Arg Val Glu Asp Ala Phe Tyr Thr Leu Val 370 375 380 Arg Glu Ile Arg Gln Tyr Arg Leu Lys Lys Ile Ser Lys Glu Glu Lys 385 390 395 400 Thr Pro Gly Cys Leu Arg Met Lys Tyr Arg Leu Lys Lys Ile Ser Lys 405 410 415 Glu Glu Lys Thr Pro Gly Cys Val Lys Ile Lys Lys Cys Ile Ile Met 420 425 430 Leu Arg Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Gly 435 440 445 Asp Val Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe 450 455 460 Val Asp Leu Arg Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly 465 470 475 480 Ala Gly Gly Val Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn 485 490 495 His Phe Val Asp 500 <210> 2 <211> 189 <212> PRT <213> Homo sapiens <400> 2 Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Gly Gly Val Gly Lys 1 5 10 15 Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp Glu Tyr 20 25 30 Asp Pro Thr Ile Glu Asp Ser Tyr Arg Lys Gln Val Val Ile Asp Gly 35 40 45 Glu Thr Cys Leu Leu Asp Ile Leu Asp Thr Ala Gly Gln Glu Glu Tyr 50 55 60 Ser Ala Met Arg Asp Gln Tyr Met Arg Thr Gly Glu Gly Phe Leu Cys 65 70 75 80 Val Phe Ala Ile Asn Asn Thr Lys Ser Phe Glu Asp Ile His His Tyr 85 90 95 Arg Glu Gln Ile Lys Arg Val Lys Asp Ser Glu Asp Val Pro Met Val 100 105 110 Leu Val Gly Asn Lys Cys Asp Leu Pro Ser Arg Thr Val Asp Thr Lys 115 120 125 Gln Ala Gln Asp Leu Ala Arg Ser Tyr Gly Ile Pro Phe Ile Glu Thr 130 135 140 Ser Ala Lys Thr Arg Gln Arg Val Glu Asp Ala Phe Tyr Thr Leu Val 145 150 155 160 Arg Glu Ile Arg Gln Tyr Arg Leu Lys Lys Ile Ser Lys Glu Glu Lys 165 170 175 Thr Pro Gly Cys Val Lys Ile Lys Lys Cys Ile Ile Met 180 185 <110> MYONGJI HOSPITAL, MYONGJI MEDICAL FOUNDATION <120> Manufacturing Method of KRAS Specific Activated Cell Using KRAS Antigen Composition <130> MP21-0069 <160> 2 <170> KoPatentIn 3.0 <210> 1 <211> 500 <212> PRT <213> artificial sequence <220> <223> KRAS Antigen for KRAS Specific Activated Cell <400> 1 Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Asp Gly Val Gly Lys 1 5 10 15 Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp Leu Arg 20 25 30 Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Val Gly Val 35 40 45 Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp 50 55 60 Leu Arg Met Lys Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His 65 70 75 80 Phe Val Asp Glu Tyr Asp Pro Thr Ile Glu Asp Ser Tyr Arg Lys Gln 85 90 95 Val Val Leu Arg Met Lys Glu Tyr Asp Pro Thr Ile Glu Asp Ser Tyr 100 105 110 Arg Lys Gln Val Val Ile Asp Gly Glu Thr Cys Leu Leu Asp Ile Leu 115 120 125 Asp Thr Ala Gly Leu Arg Met Lys Ile Asp Gly Glu Thr Cys Leu Leu 130 135 140 Asp Ile Leu Asp Thr Ala Gly Gln Glu Glu Tyr Ser Ala Met Arg Asp 145 150 155 160 Gln Tyr Met Arg Thr Gly Leu Arg Met Lys Gln Glu Glu Tyr Ser Ala 165 170 175 Met Arg Asp Gln Tyr Met Arg Thr Gly Glu Gly Phe Leu Cys Val Phe 180 185 190 Ala Ile Asn Asn Thr Lys Ser Phe Leu Arg Met Lys Glu Gly Phe Leu 195 200 205 Cys Val Phe Ala Ile Asn Asn Thr Lys Ser Phe Glu Asp Ile His His 210 215 220 Tyr Arg Glu Gln Ile Lys Arg Val Lys Asp Leu Arg Met Lys Glu Asp 225 230 235 240 Ile His His Tyr Arg Glu Gln Ile Lys Arg Val Lys Asp Ser Glu Asp 245 250 255 Val Pro Met Val Leu Val Gly Asn Lys Cys Asp Leu Leu Arg Met Lys 260 265 270 Ser Glu Asp Val Pro Met Val Leu Val Gly Asn Lys Cys Asp Leu Pro 275 280 285 Ser Arg Thr Val Asp Thr Lys Gln Ala Gln Asp Leu Ala Arg Leu Arg 290 295 300 Met Lys Pro Ser Arg Thr Val Asp Thr Lys Gln Ala Gln Asp Leu Ala 305 310 315 320 Arg Ser Tyr Gly Ile Pro Phe Ile Glu Thr Ser Ala Lys Thr Arg Gln 325 330 335 Leu Arg Met Lys Ser Tyr Gly Ile Pro Phe Ile Glu Thr Ser Ala Lys 340 345 350 Thr Arg Gln Arg Val Glu Asp Ala Phe Tyr Thr Leu Val Arg Glu Ile 355 360 365 Arg Gln Leu Arg Met Lys Arg Val Glu Asp Ala Phe Tyr Thr Leu Val 370 375 380 Arg Glu Ile Arg Gln Tyr Arg Leu Lys Lys Ile Ser Lys Glu Glu Lys 385 390 395 400 Thr Pro Gly Cys Leu Arg Met Lys Tyr Arg Leu Lys Lys Ile Ser Lys 405 410 415 Glu Glu Lys Thr Pro Gly Cys Val Lys Ile Lys Lys Cys Ile Ile Met 420 425 430 Leu Arg Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Gly 435 440 445 Asp Val Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe 450 455 460 Val Asp Leu Arg Met Lys Met Thr Glu Tyr Lys Leu Val Val Val Gly 465 470 475 480 Ala Gly Gly Val Gly Lys Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn 485 490 495 His Phe Val Asp 500 <210> 2 <211> 189 <212> PRT <213> Homo sapiens <400> 2 Met Thr Glu Tyr Lys Leu Val Val Val Gly Ala Gly Gly Val Gly Lys 1 5 10 15 Ser Ala Leu Thr Ile Gln Leu Ile Gln Asn His Phe Val Asp Glu Tyr 20 25 30 Asp Pro Thr Ile Glu Asp Ser Tyr Arg Lys Gln Val Val Ile Asp Gly 35 40 45 Glu Thr Cys Leu Leu Asp Ile Leu Asp Thr Ala Gly Gln Glu Glu Tyr 50 55 60 Ser Ala Met Arg Asp Gln Tyr Met Arg Thr Gly Glu Gly Phe Leu Cys 65 70 75 80 Val Phe Ala Ile Asn Asn Thr Lys Ser Phe Glu Asp Ile His His Tyr 85 90 95 Arg Glu Gln Ile Lys Arg Val Lys Asp Ser Glu Asp Val Pro Met Val 100 105 110 Leu Val Gly Asn Lys Cys Asp Leu Pro Ser Arg Thr Val Asp Thr Lys 115 120 125 Gln Ala Gln Asp Leu Ala Arg Ser Tyr Gly Ile Pro Phe Ile Glu Thr 130 135 140 Ser Ala Lys Thr Arg Gln Arg Val Glu Asp Ala Phe Tyr Thr Leu Val 145 150 155 160 Arg Glu Ile Arg Gln Tyr Arg Leu Lys Lys Ile Ser Lys Glu Glu Lys 165 170 175 Thr Pro Gly Cys Val Lys Ile Lys Lys Cys Ile Ile Met 180 185
Claims (9)
상기 배양된 PBMC에 2차 싸이토카인을 첨가하고 배양하여 KRAS 특이적 활성화 T 세포를 더 유도하는 제 2 단계; 및
상기 2차 싸이토카인을 첨가하고 배양한 PBMC를 배양하여 KRAS 특이적 활성화 T 세포를 증폭시킨 후 수득하는 제 3 단계;를 포함하는 것을 특징으로 하는 KRAS 특이적 활성화 T 세포 유도용 항원 조성물을 이용한 KRAS 특이적 활성화 T 세포의 유도 방법.
By culturing peripheral blood mononuclear cells (PBMC) in a medium containing an antigen composition for inducing KRAS-specific activated T cells and primary cytokines, dentritic cells are matured and KRAS-specific A first step of inducing activated T cells;
A second step of further inducing KRAS-specific activated T cells by adding and culturing a secondary cytokine to the cultured PBMC; and
KRAS-specific activated T cells using an antigen composition for inducing KRAS-specific activated T cells, characterized in that it comprises; Method for inducing red activated T cells.
The method of claim 1, wherein the first step of culturing is performed for 1 day, the second step is cultured for 2 days, and the third step is cultured for 10 days. A method for inducing KRAS-specific activated T cells using an antigen composition for inducing activated T cells.
The method of claim 1, wherein the primary cytokines are interleukin-4 and granulocyte-macrophage colony-stimulating factor (GM-CSF), and the secondary cytokines are tumor necrosis factor-α. (Tumor Necrosis Factor-α), Interleukin-1β (Interleukin-1β), and Prostaglandin E2 (Prostaglandin E2) KRAS-specific activated T cell induction method using an antigen composition for inducing KRAS-specific activated T cells .
The antigen for inducing KRAS-specific activated T cells according to claim 1, wherein the antigen composition for inducing KRAS-specific activated T cells comprises a KRAS mutant recombinant overlapping peptide consisting of the amino acid sequence of SEQ ID NO: 1 as an active ingredient. Method for inducing KRAS-specific activated T cells using the composition.
The antigen for inducing KRAS-specific activated T cells according to claim 1, wherein the antigen composition for inducing KRAS-specific activated T cells comprises a KRAS mutant recombinant overlapping peptide consisting of the amino acid sequence of SEQ ID NO: 1 as an active ingredient. Method for inducing KRAS-specific activated T cells using the composition.
The method of claim 4, wherein the KRAS mutant recombinant overlapping peptide is a total of 12 types of epitopes (epitope (n = 1, 2 , 3....10, 11, 12); where n means the sequence of the epitope, the epitope (n = 1 to 11) contains a sequence of 30 amino acids and the last epitope (n = 12) is 23 amino acids Sequence.), but epitope (n = 2, 3, ... 12) except for epitope (n = 1) is the sequence of 15 amino acids in the N-terminal direction of the immediately preceding epitope (n-1) A method for inducing KRAS-specific activated T cells using an antigen composition for inducing KRAS-specific activated T cells, characterized in that it is designed to overlap with 15 amino acid sequences in the C-terminal direction.
The method of claim 6, wherein the KRAS mutant recombinant overlapping peptide is characterized in that the epitopes (n = 1, 2, 3 ... 10, 11, 12) are located in sequence, and the epitopes are linked by an LRMK-linker A method for inducing KRAS-specific activated T cells using an antigen composition for inducing KRAS-specific activated T cells.
7. The method of claim 6, wherein the epitope (n=1) comprises the KRAS mutation G12V; An epitope (n = 1) containing KRAS mutation G12D is further linked to the N-terminal of the epitope (n = 1) by an LRMK-linker; An epitope (n = 1) containing KRAS mutation G13D is further linked to the C-terminal of the epitope (n = 12) by an LRMK-linker; For induction of KRAS-specific activated T cells, characterized in that an epitope (n = 1) without a KRAS mutation is further linked with an LRMK-linker to the C-terminal of the epitope (n = 1) containing the KRAS mutation G13D A method for inducing KRAS-specific activated T cells using an antigen composition.
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