CN114736921B - Method for obtaining genetically transformed plant by utilizing iris DFR gene - Google Patents
Method for obtaining genetically transformed plant by utilizing iris DFR gene Download PDFInfo
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- C12N15/825—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits involving biosynthetic or metabolic pathways, i.e. metabolic engineering, e.g. nicotine, caffeine involving pigment biosynthesis
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Abstract
Description
技术领域Technical field
本发明涉及一种表达马蔺DFR基因的重组表达载体,以及包含该重组表达载体的宿主细胞、基因转化的植物细胞和植株,以及它们在培育合成蓝色花青素的植物方面的应用,尤其是培育新花色或新果色的植物品种方面的应用,特别是培育蓝色花卉品种方面的应用。The present invention relates to a recombinant expression vector expressing the DFR gene of Malin, as well as host cells, genetically transformed plant cells and plants containing the recombinant expression vector, and their application in cultivating plants that synthesize blue anthocyanins, especially It is an application in cultivating plant varieties with new flower colors or new fruit colors, especially in cultivating blue flower varieties.
背景技术Background technique
马蔺(Iris lactea Pall.var.chinensis(Fisch.)Koidz,以下简称I.lacteavar.chinensis)为鸢尾科鸢尾属多年生草本宿根植物,是白色马蔺的变种,又名马兰花、马莲花等,广泛分布于我国东北、华北、西北等地,为宁夏银川市市花。Iris lactea Pall.var.chinensis (Fisch.) Koidz, hereafter referred to as I.lacteavar.chinensis) is a perennial herbaceous root plant of the genus Iris in the family Iris. It is a variant of the white Iris, also known as Malan flower, Malian flower, etc. It is widely distributed in Northeast my country, North China, Northwest China and other places, and is the city flower of Yinchuan City, Ningxia.
马蔺的花瓣主要呈蓝色、淡蓝色或蓝紫色。众所周知的,花青素是构成花瓣颜色的主要色素之一。然而,目前关于马蔺的花青素生物合成途径、花色呈色机理的研究鲜有报道。The petals of horsetail are mainly blue, light blue or bluish-purple. As we all know, anthocyanins are one of the main pigments that contribute to the color of flower petals. However, there are currently few reports on the anthocyanin biosynthetic pathway and flower color mechanism of Malinia chinensis.
一般来说,二氢黄酮醇-4-还原酶(Dihydroflavonol 4-reductase,DFR)是花青素生物合成途径的关键酶;DFR能够在NADPH辅助因子的作用下,分别催化二氢槲皮黄酮(Dihydroquercetin,DHQ)、二氢山奈黄酮醇(Dihydrokaempferol,DHK)和二氢杨梅黄酮(Dihydromyricetin,DHM)三种底物,生成对应的无色矢车菊色素、无色天竺葵色素和无色飞燕草色素(三种无色原花青素);花青素合酶(Anthocyanidin 4-synthase,ANS)再将这三种无色原花青素转化成与花色产生直接相关的花青素,即矢车菊色素(品红色)、天竺葵色素(红色)和飞燕草色素(蓝紫色);其中,飞燕草色素又称蓝色花青素。植物呈现的花色和果色是这三种色素综合的结果。Generally speaking, Dihydroflavonol 4-reductase (DFR) is the key enzyme in the anthocyanin biosynthetic pathway; DFR can catalyze dihydroflavonol ( Three substrates: Dihydroquercetin (DHQ), Dihydrokaempferol (DHK) and Dihydromyricetin (DHM), generate the corresponding colorless cyanidin, colorless geranium pigment and colorless delphinium Pigments (three colorless proanthocyanidins); Anthocyanidin 4-synthase (ANS) then converts these three colorless proanthocyanidins into anthocyanins directly related to flower color production, namely cyanidin (magenta) ), geranium pigment (red) and delphinium pigment (blue-purple); among them, delphinium pigment is also called blue anthocyanin. The flower and fruit colors of plants are the result of the combination of these three pigments.
为揭示马蔺的花青素生物合成途径,本申请发明人所在的实验室以马蔺花瓣为试材,通过转录组测序,应用PCR技术克隆了马蔺DFR基因并获得其生物信息学特征(参见文献:虎娟等,马蔺DFR基因的克隆及生物信息学特征分析,北方园艺2017(24):109-115)。In order to reveal the anthocyanin biosynthetic pathway of Malus chinensis, the laboratory of the inventor of the present application used Malin chinensis petals as test materials, and cloned the Malin chinensis DFR gene using PCR technology through transcriptome sequencing and obtained its bioinformatics characteristics ( See the literature: Hujuan et al., Cloning and bioinformatics characteristics analysis of the DFR gene of Malinus chinensis, Northern Horticulture 2017(24): 109-115).
大部分物种的DFR基因编码的蛋白氨基酸数量在300~400之间,并且DFR编码的蛋白至少存在两个经典的结构域,一个是高度保守的、与NADPH结合的结构域,另一个是与底物结合的结构域,其大致位于DFR所编码蛋白的第132~157位氨基酸附近。The protein amino acid number encoded by the DFR gene of most species is between 300 and 400, and the protein encoded by DFR has at least two classic domains, one is a highly conserved domain that binds to NADPH, and the other is a domain that binds to the substrate. The protein-binding domain is roughly located near amino acids 132 to 157 of the protein encoded by DFR.
然而,不同物种的DFR在花青素生物合成中对DHM、DHK和DHQ这三种底物的选择有差异性,例如有底物偏好性、催化效率也不同;正因如此,不同植物中合成的花青素种类不同,从而呈现出不同的颜色。例如,非洲菊的DFR能以DHM、DHK和DHQ为底物;矮牵牛DFR则主要催化DHM,对DHK没有催化作用,也因此矮牵牛缺乏橙色的天竺葵色素。另外,不同物种的DFR基因在不同生长时期、不同部位的表达量也不同,如在矮牵牛中分离了3种DFR基因(DFRA、DFRB和DFRC),但只有DFRA基因在花中转录表达,在胚珠和茎中只有微量表达。However, different species of DFR have differences in their selection of three substrates, DHM, DHK and DHQ, in anthocyanin biosynthesis, such as substrate preference and catalytic efficiency. Because of this, the synthesis in different plants Different types of anthocyanins give different colors. For example, the DFR of gerbera can use DHM, DHK and DHQ as substrates; the DFR of petunia mainly catalyzes DHM and has no catalytic effect on DHK, so petunia lacks the orange geranium pigment. In addition, the expression levels of DFR genes in different species are also different at different growth stages and in different parts. For example, three DFR genes (DFRA, DFRB and DFRC) were isolated from petunia, but only the DFRA gene was transcribed and expressed in flowers. There is only trace expression in ovules and stems.
目前,虽已成功克隆马蔺的DFR基因,但对于马蔺DFR的底物特异性偏好,以及其如何改变花色的背后机理并不清楚,从而限制了对马蔺的DFR基因的具体应用,例如在培育合成蓝色花青素的植物方面的应用,尤其是培育新花色或新果色的植物品种方面的应用。At present, although the DFR gene of Malin chinensis has been successfully cloned, the substrate specific preference of Malin chinensis DFR and the mechanism behind how it changes flower color are not clear, which limits the specific application of the DFR gene of Malin chinensis, for example. Application in cultivating plants that synthesize blue anthocyanins, especially in cultivating plant varieties with new flower colors or new fruit colors.
发明内容Contents of the invention
鉴于相关技术的上述问题和/或其他问题,本发明第一方面提供了一种重组表达载体,其中,所述重组表达载体包含第一基因表达盒和第二基因表达盒;In view of the above problems and/or other problems of related technologies, the first aspect of the present invention provides a recombinant expression vector, wherein the recombinant expression vector includes a first gene expression cassette and a second gene expression cassette;
所述第一基因表达盒为表达马蔺DFR基因的表达盒;所述第一基因表达盒包含编码马蔺DFR的基因序列;所述编码马蔺DFR的基因序列如SEQ ID No:1所示或与SEQ ID No:1所示序列具有80%以上序列同源性;The first gene expression cassette is an expression cassette expressing the DFR gene; the first gene expression cassette contains a gene sequence encoding DFR; the gene sequence encoding DFR is shown in SEQ ID No: 1 Or have more than 80% sequence homology with the sequence shown in SEQ ID No: 1;
所述第二基因表达盒为表达黑果枸杞F3’5’H基因的表达盒或表达矮牵牛F3’5’H基因的表达盒。The second gene expression cassette is an expression cassette expressing the F3'5'H gene of Lycium barbarum or the expression cassette expressing the F3'5'H gene of Petunia.
优选的,所述第二基因表达盒为表达黑果枸杞F3’5’H基因的表达盒;所述第二基因表达盒包含编码黑果枸杞F3’5’H的基因序列;所述编码黑果枸杞F3’5’H的基因序列如SEQ ID No:2所示或与SEQ ID No:2所示序列具有80%以上序列同源性;或者,Preferably, the second gene expression cassette is an expression cassette expressing the F3'5'H gene of Lycium barbarum L.; the second gene expression cassette contains a gene sequence encoding Lycium barbarum F3'5'H; the encoding F3'5'H gene of Lycium barbarum L. The gene sequence of Lycium barbarum F3'5'H is as shown in SEQ ID No: 2 or has more than 80% sequence homology with the sequence shown in SEQ ID No: 2; or,
所述第二基因表达盒为表达矮牵牛F3’5’H基因的表达盒;所述第二基因表达盒包含编码矮牵牛F3’5’H基因的基因序列;所述编码矮牵牛F3’5’H基因的基因序列如SEQ IDNo:7所示或与SEQ ID No:7所示序列具有80%以上序列同源性。The second gene expression cassette is an expression cassette expressing the petunia F3'5'H gene; the second gene expression cassette includes a gene sequence encoding the petunia F3'5'H gene; the encoding petunia F3'5'H gene The gene sequence of the F3'5'H gene is as shown in SEQ ID No:7 or has more than 80% sequence homology with the sequence shown in SEQ ID No:7.
更优选的,所述第一基因表达盒,从5’端到3’端,依次包含第一启动子、所述编码马蔺DFR的基因序列和第一终止子;More preferably, the first gene expression cassette, from the 5' end to the 3' end, sequentially includes the first promoter, the gene sequence encoding the DFR and the first terminator;
所述第一启动子的序列如SEQ ID No:3所示;The sequence of the first promoter is shown in SEQ ID No: 3;
所述第一终止子的序列如SEQ ID No:4所示;The sequence of the first terminator is shown in SEQ ID No: 4;
所述第二基因表达盒,从5’端到3’端,依次包含第二启动子、所述编码黑果枸杞或矮牵牛F3’5’H的基因序列和第二终止子;The second gene expression cassette, from the 5' end to the 3' end, sequentially includes the second promoter, the gene sequence encoding Lycium barbarum or Petunia F3'5'H, and the second terminator;
所述第二启动子的序列如SEQ ID No:5所示;The sequence of the second promoter is shown in SEQ ID No: 5;
所述第二终止子的序列如SEQ ID No:6所示。The sequence of the second terminator is shown in SEQ ID No: 6.
本发明第二方面提供了包含上述重组表达载体的宿主细胞。A second aspect of the invention provides a host cell comprising the above recombinant expression vector.
本发明第三方面提供了一种基因转化的植物细胞,其中,所述基因转化的植物细胞包含上述重组表达载体。A third aspect of the present invention provides a genetically transformed plant cell, wherein the genetically transformed plant cell contains the above-mentioned recombinant expression vector.
本发明第四方面提供了一种基因转化植株,其中,所述基因转化植株包含上述基因转化的植物细胞。The fourth aspect of the present invention provides a genetically transformed plant, wherein the genetically transformed plant contains the above-mentioned genetically transformed plant cells.
本发明第五方面提供了上述重组表达载体、上述宿主细胞、上述基因转化的植物细胞、上述基因转化植株在培育合成蓝色花青素的植物方面的应用。The fifth aspect of the present invention provides the use of the above-mentioned recombinant expression vector, the above-mentioned host cell, the above-mentioned gene-transformed plant cell, and the above-mentioned gene-transformed plant in cultivating plants that synthesize blue anthocyanins.
优选的,所述应用为培育新花色或新果色的植物品种方面的应用。Preferably, the application is an application in cultivating plant varieties with new flower colors or new fruit colors.
优选的,所述应用为培育蓝色花卉品种方面的应用。Preferably, the application is an application in cultivating blue flower varieties.
本发明第六方面提供了一种利用马蔺DFR基因获得基因转化植物的方法,其中,所述方法包括如下步骤,The sixth aspect of the present invention provides a method for obtaining genetically transformed plants using the DFR gene of Malinia chinensis, wherein the method includes the following steps:
步骤1):构建上述的重组表达载体;Step 1): Construct the above recombinant expression vector;
步骤2):将所述步骤1)构建的重组表达载体转入植物外植体,形成植物愈伤组织,并进一步培养获得含有马蔺DFR基因和F3’5’H基因的基因转化再生植株;所述F3’5’H基因为黑果枸杞或矮牵牛的F3’5’H基因。Step 2): Transfer the recombinant expression vector constructed in step 1) into plant explants to form plant callus, and further culture to obtain gene-transformed regenerated plants containing the Malin DFR gene and the F3'5'H gene; The F3'5'H gene is the F3'5'H gene of Lycium barbarum or petunia.
本发明提供了一种表达马蔺DFR基因的重组表达载体,以及包含该重组表达载体的宿主细胞、基因转化的植物细胞和基因转化植株,以及它们在培育合成蓝色花青素的植物方面的应用,尤其是培育新花色或新果色的植物品种方面的应用,特别是培育蓝色花卉品种方面的应用。The invention provides a recombinant expression vector expressing the DFR gene of Malin, as well as host cells containing the recombinant expression vector, genetically transformed plant cells and genetically transformed plants, as well as their application in cultivating plants that synthesize blue anthocyanins. Applications, especially applications in breeding plant varieties with new flower colors or new fruit colors, especially applications in breeding blue flower varieties.
附图说明Description of drawings
图1的上半部分为DHQ标准品的HPLC结果,下半部分为DHQ底物经酶促反应后的HPLC结果;其中纵坐标表示检测器的电信号响应值(AU),横坐标表示时间;以下皆同;The upper part of Figure 1 shows the HPLC results of the DHQ standard, and the lower part shows the HPLC results of the DHQ substrate after the enzymatic reaction; the ordinate represents the electrical signal response value (AU) of the detector, and the abscissa represents time; All the following are the same;
图2的上半部分为DHK标准品的HPLC结果,下半部分为DHK底物经酶促反应后的HPLC结果;The upper part of Figure 2 shows the HPLC results of the DHK standard, and the lower part shows the HPLC results of the DHK substrate after enzymatic reaction;
图3的上半部分为DHM标准品的HPLC结果,下半部分为DHM底物经酶促反应后的HPLC结果。The upper part of Figure 3 shows the HPLC results of the DHM standard, and the lower part shows the HPLC results of the DHM substrate after enzymatic reaction.
具体实施方式Detailed ways
以下通过具体实施方式对本发明作进一步的说明,但本发明并不限于这些具体实施方式。下面具体实施方式中所用的材料、试剂等,如无特殊说明,均可从商业途径得到。其中未注明具体技术或条件者,按照本领域内的文献所描述的技术或条件(例如参考J.萨姆布鲁克等著,黄培堂等译的《分子克隆实验指南》第三版,科学出版社)或按照产品说明书进行。The present invention will be further described below through specific embodiments, but the present invention is not limited to these specific embodiments. Materials, reagents, etc. used in the following specific embodiments can be obtained from commercial sources unless otherwise specified. If specific techniques or conditions are not specified, the techniques or conditions described in literature in the field shall be followed (for example, refer to the third edition of "Molecular Cloning Experiment Guide" translated by J. Sambrook et al., Huang Peitang et al., Science Press ) or follow the product instructions.
一、关于马蔺DFR基因的克隆和鉴定1. Cloning and identification of the DFR gene of Malin
参见文献:虎娟等,马蔺DFR基因的克隆及生物信息学特征分析,北方园艺2017(24):109-115。See the literature: Hujuan et al., Cloning and bioinformatics characteristics analysis of the DFR gene of Malinus chinensis, Northern Horticulture 2017(24): 109-115.
马蔺DFR基因全长1427bp,共编码357个氨基酸(本申请发明人实验室将该基因命名为IlDFR,GenBank登陆号为KY907171)。该基因在氨基酸水平上与多种植物的DFR具有较高同源性,在系统进化上与同属的荷兰鸢尾(I.hollandica)的DFR亲缘关系较近;预测其蛋白质相对分子质量为39.99kDa,等电点5.89,主要有α-螺旋和β-折叠构成,定位于细胞质,属于酸性亲水不含信号肽的不稳定类蛋白质。马蔺DFR基因有一段氨基酸序列与大部分物种的DFR特有相对保守的NADPH结合域非常相似,只有4个氨基酸残基有所差异。The full length of the Malin DFR gene is 1427 bp, encoding a total of 357 amino acids (the inventor's laboratory named the gene IlDFR, and the GenBank accession number is KY907171). This gene has high homology with the DFR of various plants at the amino acid level, and is closely related to the DFR of the same genus I.hollandica in terms of phylogeny; its relative molecular mass of the protein is predicted to be 39.99kDa, and it is isoelectric. Point 5.89, mainly composed of α-helices and β-sheets, is located in the cytoplasm, and is an acidic, hydrophilic, unstable protein without a signal peptide. The Amino Acid DFR gene has an amino acid sequence that is very similar to the relatively conserved NADPH-binding domain unique to DFR in most species, with only four amino acid residues differing.
二、马蔺DFR的底物结合特性研究2. Study on the substrate binding characteristics of Malin DFR
1、马蔺DFR基因原核表达载体的构建1. Construction of prokaryotic expression vector of Malin DFR gene
根据原核生物的密码子偏好,将上述第一部分克隆并鉴定的马蔺DFR基因序列送至GenScript生物科技有限公司进行优化并合成。According to the codon preference of prokaryotes, the Malin DFR gene sequence cloned and identified in the first part was sent to GenScript Biotechnology Co., Ltd. for optimization and synthesis.
将pTrc-CKS质粒(购自通用生物系统(安徽)有限公司)与上述合成的马蔺DFR优化序列分别通过BamH I和Nhe I进行双酶切,经琼脂糖凝胶电泳回收后进行连接,再转化至JM109感受态细胞。挑取阳性克隆子,利用菌落PCR的方法,对获得的pTrc-CKS-DFR阳性重组子进行鉴定,经琼脂糖凝胶电泳分析,检测到的目的条带大小与预期一致;再经测序验证,结果正确,表明已成功构建重组质粒pTrc-CKS-DFR;获得了携带有该重组质粒pTrc-CKS-DFR的JM109。The pTrc-CKS plasmid (purchased from General Biosystems (Anhui) Co., Ltd.) and the above-mentioned synthesized Malin DFR optimized sequence were double-digested by BamHI and Nhe I respectively, recovered by agarose gel electrophoresis, and then ligated. Transformed into JM109 competent cells. Pick the positive clones and use colony PCR to identify the obtained pTrc-CKS-DFR positive recombinants. After agarose gel electrophoresis analysis, the size of the detected target band is consistent with the expected; and then verified by sequencing. The result is correct, indicating that the recombinant plasmid pTrc-CKS-DFR has been successfully constructed; JM109 carrying the recombinant plasmid pTrc-CKS-DFR was obtained.
2、马蔺DFR的原核表达、纯化和鉴定2. Prokaryotic expression, purification and identification of Malin DFR
将上述获得的携带有重组质粒pTrc-CKS-DFR的JM109菌株接种在5mL(含25mg/L氨苄西林)液体LB培养基中,37℃、220rpm培养至对数期,将菌液按1:100比例转接至1L新鲜的液体LB培养基中(含25mg/L氨苄西林),培养至对数期,加入IPTG使其终浓度为0.5mM,16℃、220rpm诱导培养15h,4℃、6,000×g离心10min,收集菌体,加入PBS缓冲液重悬菌体,超声破碎,离心后分别收集上清和沉淀,进行12%SDS-PAGE检测和Western Blot鉴定,结果表明,所获得的重组蛋白(马蔺DFR)以可溶性形式表达,所表达的蛋白约为95kDa。The JM109 strain carrying the recombinant plasmid pTrc-CKS-DFR obtained above was inoculated into 5 mL (containing 25 mg/L ampicillin) liquid LB medium, cultured at 37°C and 220 rpm to the logarithmic phase, and the bacterial liquid was mixed at 1:100. Ratio transfer to 1L fresh liquid LB medium (containing 25mg/L ampicillin), culture to the logarithmic phase, add IPTG to a final concentration of 0.5mM, induce culture at 16℃, 220rpm for 15h, 4℃, 6,000× centrifuge for 10 minutes, collect the cells, add PBS buffer to resuspend the cells, break with ultrasonic, collect the supernatant and precipitate after centrifugation, and conduct 12% SDS-PAGE detection and Western Blot identification. The results show that the obtained recombinant protein (horse DFR) is expressed in a soluble form, and the expressed protein is approximately 95kDa.
利用镍琼脂糖凝胶填充柱亲和层析法纯化重组蛋白,蛋白定量检测仪器测定其浓度后,用100mM Tris-HCL(pH 7.0)调整蛋白浓度至0.5mg/mL。The recombinant protein was purified using nickel agarose gel packed column affinity chromatography. After measuring its concentration with a protein quantitative detection instrument, the protein concentration was adjusted to 0.5 mg/mL with 100 mM Tris-HCL (pH 7.0).
3、马蔺DFR的底物结合特性分析3. Analysis of substrate binding characteristics of Malin DFR
向含有等量的DHQ、DHK和DHM底物的酶促反应体系(含100mM Tris-HCl,pH 7.0,20mM NADPH)中分别加入等量的马蔺DFR(上述获得的重组蛋白酶);30℃反应30min后,终止反应。反应液经过滤,取10μL用于waters2695高效液相色谱分析,结果参见图1-3。Add an equal amount of Malin DFR (the recombinant protease obtained above) to the enzymatic reaction system containing equal amounts of DHQ, DHK and DHM substrates (containing 100mM Tris-HCl, pH 7.0, 20mM NADPH) respectively; react at 30°C After 30 minutes, the reaction was terminated. The reaction solution was filtered, and 10 μL was taken for analysis by waters2695 high performance liquid chromatography. The results are shown in Figure 1-3.
参见图1,上半部分为DHQ标准品的HPLC结果,下半部分为DHQ底物经酶促反应后的HPLC结果;对比两个结果可以看出,马蔺DFR与DHQ接触后,无新的生成物;说明马蔺DFR不催化DHQ底物。Refer to Figure 1. The upper part is the HPLC result of DHQ standard substance, and the lower part is the HPLC result of DHQ substrate after enzymatic reaction. Comparing the two results, it can be seen that after the contact between Malin DFR and DHQ, no new The product shows that Malin DFR does not catalyze DHQ substrate.
参见图2,上半部分为DHK标准品的HPLC结果,下半部分为DHK底物经酶促反应后的HPLC结果;对比两个结果可以看出,DHK底物经酶促反应后,DHK底物的峰面积显著下降,有新的生成物(保留时间为3.625min左右)。Refer to Figure 2. The upper part is the HPLC result of the DHK standard substance, and the lower part is the HPLC result of the DHK substrate after the enzymatic reaction. Comparing the two results, it can be seen that after the DHK substrate is enzymatically reacted, the DHK substrate is The peak area of the product decreased significantly, and there were new products (retention time was about 3.625 min).
参见图3,上半部分为DHM标准品的HPLC结果,下半部分为DHM底物经酶促反应后的HPLC结果;对比两个结果可以看出,DHM底物经酶促反应后,DHM底物的峰面积显著下降,有新的生成物(保留时间为3.625min左右)。Refer to Figure 3. The upper part is the HPLC result of the DHM standard substance, and the lower part is the HPLC result of the DHM substrate after the enzymatic reaction. Comparing the two results, it can be seen that after the DHM substrate is enzymatically reacted, the DHM substrate is The peak area of the product decreased significantly, and there were new products (retention time was about 3.625 min).
综合图1-图3的体外酶活分析结果,可以推断马蔺DFR蛋白在NADPH辅助因子的作用下,可优先催化DHM,其次是DHK,不能催化DHQ。Based on the in vitro enzyme activity analysis results in Figures 1 to 3, it can be inferred that the DFR protein, under the action of NADPH cofactor, can catalyze DHM first, followed by DHK, and cannot catalyze DHQ.
基于上述关于马蔺DFR底物结合特性的研究成果,以及目前已知的花青素生物合成途径理论,本申请发明人认为可以做出的推测是:马蔺DFR蛋白对于DHM的底物特异性偏好,包括不能催化DHQ底物的特性,可能是马蔺呈现出淡蓝色、蓝紫色的花色,而无红色花色的主要原因。Based on the above-mentioned research results on the substrate binding properties of Malin DFR and the currently known anthocyanin biosynthetic pathway theory, the inventor of the present application believes that the speculation that can be made is: the substrate specificity of Malin DFR protein for DHM Preferences, including the inability to catalyze DHQ substrates, may be the main reason why the flower colors of horsetail are light blue and blue-violet, but not red.
三、植物蓝色花瓣和蓝色果实的形成机理和应用3. The formation mechanism and application of blue petals and blue fruits of plants
1、类黄酮3’5’-羟化酶F3’5’H基因1. Flavonoid 3’5’-hydroxylase F3’5’H gene
自然界花色繁多,但一些重要花卉如康乃馨、玫瑰(或月季)、菊花、水仙等因为缺少飞燕草色素(蓝紫色)生物合成相关的酶类(如F3’5’H),而没有蓝色和紫色品系;果实的果色也是如此;这也是目前运用传统杂交育种方法无法解决的问题。采用基因转化技术将某些植物的F3’5’H基因导入到特定植物培养细胞,可以改变和调控花青素生物合成途径,这也是培育新花色或新果色植物品种的关键一步。There are many flower colors in nature, but some important flowers such as carnations, roses (or roses), chrysanthemums, narcissus, etc. do not have blue color due to the lack of enzymes (such as F3'5'H) related to the biosynthesis of delphinium pigment (blue-purple). and purple strains; the same is true for the fruit color; this is also a problem that cannot be solved using traditional cross-breeding methods. Gene transformation technology is used to introduce the F3’5’H gene of certain plants into specific plant culture cells, which can change and regulate the anthocyanin biosynthetic pathway. This is also a key step in cultivating new flower or fruit color plant varieties.
2、二氢黄酮醇-4-还原酶DFR基因2. Dihydroflavonol-4-reductase DFR gene
但是,单单导入其它植物的F3’5’H基因,或者同时再导入一般植物的DFR基因,并不一定能够形成蓝色花瓣和蓝色果实。这是因为一般植物的DFR,如果对DHQ、DHK和DHM底物的结合没有特异性偏好,则生成了矢车菊色素(品红色)、天竺葵色素(红色)和飞燕草色素(蓝紫色)三种花青素,呈现的花色和果色是这三种色素的混合。However, simply introducing the F3’5’H gene of other plants, or simultaneously introducing the DFR gene of general plants, may not necessarily lead to the formation of blue petals and blue fruits. This is because the DFR of general plants, if there is no specific preference for the binding of DHQ, DHK and DHM substrates, will produce cyanidin (magenta), geranium pigment (red) and delphinium pigment (blue-violet) There are three types of anthocyanins, and the flower and fruit colors presented are a mixture of these three pigments.
因此,利用马蔺的DFR基因对于DHM的底物特异性偏好,是获得利用基因转化培育蓝色花青素新品种(本申请技术方案)的关键,尤其是应用于培育新花色或新果色的植物品种,特别是应用于培养蓝色花色的新品种。Therefore, utilizing the substrate-specific preference of DFR gene for DHM is the key to using gene transformation to cultivate new blue anthocyanin varieties (technical solution of this application), especially for cultivating new flower colors or new fruit colors. Plant varieties, especially those used to cultivate new varieties with blue flowers.
基于马蔺DFR底物结合特性的研究成果,本申请的发明人经过多次尝试,发现黑果枸杞或矮牵牛的F3’5’H基因与马蔺DFR基因组合的重组表达载体,能够成功获得基因转化新品种。Based on the research results of the substrate binding properties of Malin DFR, the inventor of the present application has made many attempts and found that the recombinant expression vector combining the F3'5'H gene of black wolfberry or petunia and the Malin DFR gene can successfully Obtain new genetically transformed varieties.
四、利用马蔺DFR基因获得基因转化植物的方法4. Methods for obtaining genetically transformed plants using the Malin DFR gene
在本发明的一个具体实施方案中,提供了一种重组表达载体,其中,所述重组表达载体包含第一基因表达盒和第二基因表达盒;In a specific embodiment of the present invention, a recombinant expression vector is provided, wherein the recombinant expression vector includes a first gene expression cassette and a second gene expression cassette;
所述第一基因表达盒为表达马蔺DFR基因的表达盒;所述第一基因表达盒包含编码马蔺DFR的基因序列;所述编码马蔺DFR的基因序列如SEQ ID No:1所示或与SEQ ID No:1所示序列具有80%以上序列同源性;The first gene expression cassette is an expression cassette expressing the DFR gene; the first gene expression cassette contains a gene sequence encoding DFR; the gene sequence encoding DFR is shown in SEQ ID No: 1 Or have more than 80% sequence homology with the sequence shown in SEQ ID No: 1;
所述第二基因表达盒为表达黑果枸杞F3’5’H基因的表达盒或表达矮牵牛F3’5’H基因的表达盒。The second gene expression cassette is an expression cassette expressing the F3'5'H gene of Lycium barbarum or the expression cassette expressing the F3'5'H gene of Petunia.
在本发明的一个优选实施方案中,所述第二基因表达盒为表达黑果枸杞F3’5’H基因的表达盒;所述第二基因表达盒包含编码黑果枸杞F3’5’H的基因序列;所述编码黑果枸杞F3’5’H的基因序列如SEQ ID No:2所示或与SEQ ID No:2所示序列具有80%以上序列同源性;或者,In a preferred embodiment of the present invention, the second gene expression cassette is an expression cassette expressing the Lycium barbarum F3'5'H gene; the second gene expression cassette contains the gene encoding Lycium barbarum F3'5'H. Gene sequence; the gene sequence encoding Lycium barbarum F3'5'H is as shown in SEQ ID No: 2 or has more than 80% sequence homology with the sequence shown in SEQ ID No: 2; or,
所述第二基因表达盒为表达矮牵牛F3’5’H基因的表达盒;所述第二基因表达盒包含编码矮牵牛F3’5’H基因的基因序列;所述编码矮牵牛F3’5’H基因的基因序列如SEQ IDNo:7所示或与SEQ ID No:7所示序列具有80%以上序列同源性。The second gene expression cassette is an expression cassette expressing the petunia F3'5'H gene; the second gene expression cassette includes a gene sequence encoding the petunia F3'5'H gene; the encoding petunia F3'5'H gene The gene sequence of the F3'5'H gene is as shown in SEQ ID No:7 or has more than 80% sequence homology with the sequence shown in SEQ ID No:7.
关于核酸序列的“序列同源性”的百分比,是通过确定两个序列中存在的核苷酸的数目来产生匹配位置的数目,将匹配位置的数目除以比较窗口中的位置总数,将结果乘以100从而产生序列的同源性百分比。序列同源性,也被称为序列同一性。The percentage of "sequence homology" with respect to nucleic acid sequences is determined by determining the number of nucleotides present in the two sequences to produce the number of matching positions, dividing the number of matching positions by the total number of positions in the comparison window, and dividing the result Multiply by 100 to yield the percent homology of the sequence. Sequence homology, also known as sequence identity.
在本发明的一个具体实施方案中,上述第一基因表达盒中的编码马蔺DFR的基因序列、上述第二基因表达盒中的编码黑果枸杞F3’5’H的基因序列和编码矮牵牛F3’5’H的基因序列分别可以在SEQ ID NO.1、SEQ ID NO.2和SEQ ID NO.7所示序列的基础之上进行少量核苷酸的缺失、插入或者核苷酸突变,获得同源性在80%以上的核苷酸序列。少量核苷酸的置换(缺失或插入,或者核苷酸突变),特别是保守区域置换所获得的变体,仍然能够编码出具有相同或基本相同功能的和马蔺DFR蛋白、黑果枸杞F3’5’H蛋白、矮牵牛F3’5’H蛋白,那么这些变体都在本申请方案的保护范围内。In a specific embodiment of the present invention, the gene sequence encoding Lycium barbarum DFR in the above-mentioned first gene expression cassette, the gene sequence encoding Lycium barbarum F3'5'H in the above-mentioned second gene expression cassette, and the gene sequence encoding Lycium barbarum F3'5'H in the above-mentioned second gene expression cassette. The gene sequence of bovine F3'5'H can be deleted, inserted or mutated with a small number of nucleotides based on the sequences shown in SEQ ID NO.1, SEQ ID NO.2 and SEQ ID NO.7 respectively. , to obtain nucleotide sequences with more than 80% homology. Substitutions of a small number of nucleotides (deletions or insertions, or nucleotide mutations), especially variants obtained by substitutions of conserved regions, can still encode Hematin DFR protein and Lycium barbarum F3 with the same or basically the same functions. '5'H protein, petunia F3'5'H protein, then these variants are within the protection scope of the scheme of this application.
下面实施例1以包含马蔺DFR基因的表达盒和黑果枸杞F3’5’H基因的表达盒的重组表达载体为例进行具体阐述。The following Example 1 takes the recombinant expression vector containing the expression cassette of the DFR gene of Malin and the expression cassette of F3'5'H gene of Lycium barbarum as an example for detailed explanation.
实施例1Example 1
1、构建重组表达载体1. Construct recombinant expression vector
实施例1的重组表达载体包含第一基因表达盒和第二基因表达盒。The recombinant expression vector of Example 1 includes a first gene expression cassette and a second gene expression cassette.
其中,第一基因表达盒,从5’端到3’端,依次包含第一启动子、编码马蔺DFR的基因序列和第一终止子。Among them, the first gene expression cassette, from the 5' end to the 3' end, contains the first promoter, the gene sequence encoding the DFR and the first terminator in sequence.
编码马蔺DFR的基因序列如SEQ ID No:1所示。The gene sequence encoding Malin DFR is shown in SEQ ID No: 1.
第一启动子为拟南芥ACT2(actin 2)启动子,其序列如SEQ ID No:3所示;第一终止子为拟南芥HSP 18.2终止子,其序列如SEQ ID No:4所示。The first promoter is the Arabidopsis ACT2 (actin 2) promoter, whose sequence is shown in SEQ ID No: 3; the first terminator is the Arabidopsis HSP 18.2 terminator, whose sequence is shown in SEQ ID No: 4 .
其中,第二基因表达盒,从5’端到3’端,依次包含第二启动子、编码黑果枸杞F3’5’H的基因序列和第二终止子。Among them, the second gene expression cassette, from the 5' end to the 3' end, contains the second promoter, the gene sequence encoding Lycium barbarum F3'5'H, and the second terminator.
编码黑果枸杞F3’5’H的基因序列如SEQ ID No:2所示。The gene sequence encoding Lycium barbarum F3’5’H is shown in SEQ ID No: 2.
第二启动子为拟南芥UBQ(Ubiquitin)的启动子,其序列如SEQ ID No:5所示;第二终止子为拟南芥UBQ终止子,其序列如SEQ ID No:6所示。The second promoter is the Arabidopsis UBQ (Ubiquitin) promoter, and its sequence is shown in SEQ ID No: 5; the second terminator is the Arabidopsis UBQ terminator, and its sequence is shown in SEQ ID No: 6.
重组表达载体的构建过程如下:The construction process of recombinant expression vector is as follows:
(1)合成LrF3’5’H DNA(SEQ ID No:2)作为片段a;合成IlDFR DNA(SEQ ID No:1)作为片段b;(1) Synthesize LrF3’5’H DNA (SEQ ID No: 2) as fragment a; synthesize IlDFR DNA (SEQ ID No: 1) as fragment b;
(2)将pNULPGE600载体(15004bp),采用Pac I、PmaC I限制性内切酶消化后,经凝胶电泳分离(6bp,14998bp),回收14998bp片段作为片段c。(2) Digest the pNULPGE600 vector (15004bp) with Pac I and PmaC I restriction endonucleases, separate it by gel electrophoresis (6bp, 14998bp), and recover the 14998bp fragment as fragment c.
(3)将合成的LrF3’5’H DNA片段a同样经Pac I、PmaC I限制性内切酶消化后,与酶切pNULPGE600载体回收的片段c进行连接,形成一个pNULPGE0601过渡载体d(16537bp)。(3) The synthesized LrF3'5'H DNA fragment a is also digested with Pac I and PmaC I restriction enzymes, and then ligated with the fragment c recovered from the pNULPGE600 vector to form a pNULPGE0601 transition vector d (16537 bp) .
(4)将过渡载体d,采用Spe I、Srf I限制性内切酶消化后,经凝胶电泳分离(9bp,16528bp),回收16528bp的片段e。(4) Digest the transition vector d with Spe I and Srf I restriction enzymes, and then separate it by gel electrophoresis (9 bp, 16528 bp), and recover the 16528 bp fragment e.
(5)将合成的IlDFR DNA片段b同样经Spe I、Srf I限制性内切酶消化后,与过渡载体酶切后回收的16528bp片段e进行连接,形成多基因表达载体,命名为pNULPGE0602(17617bp)。(5) The synthesized IlDFR DNA fragment b was also digested with Spe I and Srf I restriction endonucleases, and then ligated with the 16528 bp fragment e recovered after digestion with the transition vector to form a multi-gene expression vector, named pNULPGE0602 (17617 bp ).
(6)将pNULPGE0602载体转化大肠杆菌后,测序验证插入片段。(6) After transforming the pNULPGE0602 vector into E. coli, sequence the inserted fragment to verify it.
2、基因转化并培养获得基因转化植株2. Gene transformation and culture to obtain genetically transformed plants
将上述构建获得的重组表达载体(pNULPGE0602载体)转入植物外植体,形成植物愈伤组织,并进一步培养获得含有马蔺DFR基因和黑果枸杞LrF3’5’H基因的转化再生植株。The recombinant expression vector (pNULPGE0602 vector) obtained by the above construction was transferred into plant explants to form plant callus tissue, and further cultured to obtain transformed regenerated plants containing the Malin DFR gene and the Lycium barbarum LrF3’5’H gene.
关于待转化的植物外植体,本实施例中采用的是矮牵牛的叶片外植体;具体来说,将无菌矮牵牛叶子在超净工作台中切割至0.5×0.5cm大小获得矮牵牛的叶片外植体,作为基因转化受体。Regarding the plant explants to be transformed, petunia leaf explants were used in this example; specifically, sterile petunia leaves were cut to a size of 0.5×0.5cm on a clean workbench to obtain petunia leaves. Petunias leaf explants serve as receptors for gene transformation.
关于农杆菌侵染液的制备如下:向农杆菌菌株EHA105感受态细胞中加入质粒载体(上述获得的重组表达载体pNULPGE0602载体),轻轻混匀;再迅速放入液氮2min;再迅速放入37℃金属浴5min(2min时混匀菌体一次);冰上5min,期间混匀两次;加入预热28℃的LB培养基500μL,充分混匀;28℃的摇床(200rpm)培养2-4小时,取培育获得的菌液100μL,均匀涂布于事先预热28℃的含有卡那霉素的固体LB培养基中,于28℃培养一晚;再挑取抗性菌落至含有卡那霉素的LB液体培养基中,28℃的摇床(200rpm)培养至OD550=0.8-1.0;4000rpm离心10min,去上清,将离心后的农杆菌菌体重悬于侵染液(4.41g/L MS+30g/L蔗糖+0.2mg/L萘乙酸+1mg/L 6-苄腺嘌呤+20mg/L乙酰丁香酮,pH值5.8),配制获得本实施例的农杆菌侵染液。The preparation of the Agrobacterium infection solution is as follows: Add the plasmid vector (the recombinant expression vector pNULPGE0602 vector obtained above) to the Agrobacterium strain EHA105 competent cells, mix gently; then quickly put it into liquid nitrogen for 2 minutes; then quickly put it into 37°C metal bath for 5 minutes (mix the bacteria once every 2 minutes); keep on ice for 5 minutes, mixing twice during this period; add 500 μL of preheated 28°C LB culture medium, mix thoroughly; culture on a 28°C shaker (200rpm) for 2 -4 hours, take 100 μL of the cultured bacterial liquid, spread it evenly into the solid LB medium containing kanamycin that has been preheated to 28°C, and culture it at 28°C overnight; then pick the resistant colonies until they contain kanamycin. In the LB liquid medium of namycin, culture on a shaker (200rpm) at 28°C until OD550=0.8-1.0; centrifuge at 4000rpm for 10 minutes, remove the supernatant, and resuspend the centrifuged Agrobacterium bacteria in the infection solution (4.41g /L MS+30g/L sucrose+0.2mg/L naphthylacetic acid+1mg/L 6-benzyladenine+20mg/L acetosyringone, pH value 5.8), prepare the Agrobacterium infection solution of this embodiment.
关于农杆菌介导的基因转化的过程:将上述的矮牵牛的叶片外植体浸泡在上述配制的农杆菌侵染液中3min,然后置于共培养基(4.41g/L MS+30g/L蔗糖+0.2mg/L萘乙酸+1mg/L 6-苄腺嘌呤+20mg/L乙酰丁香酮+琼脂0.7g/L,pH值5.8)上,22℃暗培养3天;之后将侵染后的外植体转移至选拔培养基(4.41g/L MS+30g/L蔗糖+0.2mg/L萘乙酸+1mg/L 6-苄腺嘌呤+Agar 0.7g/L+500mg/L羧苄西林+25mg/L卡那霉素,pH值5.8)上,在25℃、光照16h的培养箱中进行培养,直到不定芽长出;将不定芽切下,移至生根培养基(4.41g/L MS+20g/L蔗糖+Agar 0.7g/L+250mg/L羧苄西林,pH值5.8)上,直到长成有根的基因转化矮牵牛植株。将基因转化矮牵牛植株种植于土壤中,开花后,花色为蓝色。Regarding the process of Agrobacterium-mediated gene transformation: Soak the above-mentioned petunia leaf explants in the Agrobacterium infection solution prepared above for 3 minutes, and then place them in the co-culture medium (4.41g/L MS+30g/ L sucrose + 0.2 mg/L naphthalene acetic acid + 1 mg/L 6-benzyl adenine + 20 mg/L acetosyringone + agar 0.7 g/L, pH value 5.8), and cultured in the dark at 22°C for 3 days; then, after infection The explants were transferred to the selection medium (4.41g/L MS+30g/L sucrose+0.2mg/L naphthylacetic acid+1mg/L 6-benzyladenine+Agar 0.7g/L+500mg/L carbenicillin+ 25 mg/L kanamycin, pH 5.8), culture in an incubator at 25°C and 16 hours of light until adventitious buds grow; cut off the adventitious buds and move them to rooting medium (4.41 g/L MS +20g/L sucrose+Agar 0.7g/L+250mg/L carbenicillin, pH 5.8) until the genetically transformed petunia plants grow into roots. Genetically transformed petunia plants are planted in the soil. After flowering, the flower color will be blue.
关于获得的基因转化矮牵牛植株的鉴定:采用CTAB法提取基因转化矮牵牛植株的基因组DNA,经PCR扩增鉴定(PCR扩增产物360bp),本实施例转化获得的基因转化矮牵牛植株中含有马蔺DFR基因。Regarding the identification of the obtained gene-transformed petunia plants: the CTAB method was used to extract the genomic DNA of the gene-transformed petunia plants, and after PCR amplification and identification (PCR amplification product 360 bp), the gene-transformed petunia obtained by transformation in this example The plant contains the Malin DFR gene.
此外,本申请发明人还将底物DHM和/或DHK涂布于上述被切下的不定芽的切口部分,再转移至生根培养基进行培养,切口部分的愈伤组织呈现蓝色。In addition, the inventor of the present application also applied the substrates DHM and/or DHK to the incision of the cut adventitious buds, and then transferred them to the rooting medium for culture. The callus in the incision showed blue.
实施例2Example 2
实施例2的重组表达载体包含第一基因表达盒和第二基因表达盒。The recombinant expression vector of Example 2 includes a first gene expression cassette and a second gene expression cassette.
实施例2的第一基因表达盒同实施例1的第一基因表达盒,具体不再赘述。The first gene expression cassette in Example 2 is the same as the first gene expression cassette in Example 1, and the details will not be repeated.
实施例2的第二基因表达盒,从5’端到3’端,依次包含第二启动子、编码矮牵牛F3’5’H的基因序列和第二终止子。The second gene expression cassette of Example 2, from the 5' end to the 3' end, sequentially includes a second promoter, a gene sequence encoding petunia F3'5'H, and a second terminator.
编码矮牵牛F3’5’H的基因序列如SEQ ID No:7所示。The gene sequence encoding petunia F3'5'H is shown in SEQ ID No: 7.
第二启动子为拟南芥UBQ的启动子,其序列如SEQ ID No:5所示;第二终止子为拟南芥UBQ终止子,其序列如SEQ ID No:6所示。The second promoter is the promoter of Arabidopsis thaliana UBQ, and its sequence is shown in SEQ ID No: 5; the second terminator is the Arabidopsis thaliana UBQ terminator, and its sequence is shown in SEQ ID No: 6.
步骤1)的载体的构建过程,基本同实施例1的,具体不再赘述。The vector construction process in step 1) is basically the same as that in Embodiment 1, and will not be described in details.
步骤2)的基因转化并培养获得基因转化植株的过程,基本基本同实施例1的,具体不再赘述。The process of gene transformation and culture in step 2) to obtain gene-transformed plants is basically the same as in Example 1, and will not be described in detail.
实施例2获得的基因转化矮牵牛植株种植于土壤中,开花后,花色也呈蓝色。The genetically transformed petunia plants obtained in Example 2 were planted in the soil. After flowering, the flower color also turned blue.
此外,同样的,本申请发明人还将底物DNM和/或DHK涂布于实施例2中的不定芽切口部分,再转移至生根培养基进行培养,切口部分的愈伤组织呈现蓝色。In addition, similarly, the inventor of the present application also applied the substrates DNM and/or DHK to the incision part of the adventitious buds in Example 2, and then transferred it to the rooting medium for culture. The callus tissue in the incision part showed blue.
应当理解,虽然本说明书按照实施方式加以描述,但并非每个实施方式仅包含一个独立的技术方案,说明书的这种叙述方式仅仅是为清楚起见,本领域技术人员应当将说明书作为一个整体,各实施方式中的技术方案也可以经适当组合,形成本领域技术人员可以理解的其他实施方式。It should be understood that although this specification is described in terms of implementations, not each implementation only contains an independent technical solution. This description of the specification is only for the sake of clarity. Persons skilled in the art should take the specification as a whole and understand each individual solution. The technical solutions in the embodiments can also be appropriately combined to form other embodiments that can be understood by those skilled in the art.
上文所列出的一系列的详细说明仅仅是针对本发明的可行性实施方式的具体说明,它们并非用以限制本发明的保护范围,凡未脱离本发明技艺精神所作的等效实施方式或变更均应包含在本发明的保护范围之内。The series of detailed descriptions listed above are only specific descriptions of feasible implementations of the present invention. They are not intended to limit the protection scope of the present invention. Any equivalent implementations or implementations that do not deviate from the technical spirit of the present invention are not intended to limit the protection scope of the present invention. All changes should be included in the protection scope of the present invention.
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