CN112409465B - Application of protein M57 in regulating rice resistance to ammonium - Google Patents
Application of protein M57 in regulating rice resistance to ammonium Download PDFInfo
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- CN112409465B CN112409465B CN201910772914.2A CN201910772914A CN112409465B CN 112409465 B CN112409465 B CN 112409465B CN 201910772914 A CN201910772914 A CN 201910772914A CN 112409465 B CN112409465 B CN 112409465B
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Abstract
Description
技术领域technical field
本发明属于生物技术领域,具体涉及蛋白质M57在调控水稻对铵的抵抗能力中的应用。The invention belongs to the field of biotechnology, in particular to the application of protein M57 in regulating the resistance of rice to ammonium.
背景技术Background technique
水稻是世界上最重要的粮食作物之一,全球有120多个国家种植水稻,栽培面积常年保持在1.5亿公顷以上,并有占世界50%比例的人口以稻米为主食。水稻的产量非常依赖氮肥的施用,但氮肥的施用也产生了许多严重的负面影响,例如,施用的氮肥中大部分不能被水稻有效利用,却以各种形态的氮化合物渗透到地下水和挥发到空气中,经氮循环造成大面积水资源、土壤和生态系统的污染和破坏。另外,水稻是喜铵态氮肥的作物,但过量的铵肥又对水稻产生毒害,影响水稻的生长和产量。因此,提高水稻对铵的抵抗能力对水稻生产至关重要。Rice is one of the most important food crops in the world. Rice is grown in more than 120 countries around the world, and the cultivated area is maintained at more than 150 million hectares all year round. Rice is the staple food for 50% of the world's population. The yield of rice is very dependent on the application of nitrogen fertilizer, but the application of nitrogen fertilizer also has many serious negative effects. In the air, the nitrogen cycle causes pollution and damage to a large area of water resources, soil and ecosystems. In addition, rice is a crop that prefers ammonium nitrogen fertilizer, but excessive ammonium fertilizer is toxic to rice, affecting the growth and yield of rice. Therefore, improving the resistance of rice to ammonium is crucial for rice production.
发明内容SUMMARY OF THE INVENTION
本发明的目的为提高植物对铵的抵抗能力。The purpose of the present invention is to improve the resistance of plants to ammonium.
本发明首先保护蛋白质M57的应用,可为如下a1)-a10)中的至少一种:a1)调控植物对铵的抵抗能力;a2)调控植物产量;a3)调控植物粒重;a4)调控植物粒宽;a5)调控植物穗长;a6)调控植物穗粒数;a7)调控植物叶片宽度;a8)调控植物茎杆直径;a9)调控植物叶夹角;a10)调控植物株高。The present invention firstly protects the application of protein M57, which can be at least one of the following a1)-a10): a1) regulating plant resistance to ammonium; a2) regulating plant yield; a3) regulating plant grain weight; a4) regulating plant grain width; a5) regulation of plant ear length; a6) regulation of plant ear number of grains; a7) regulation of plant leaf width; a8) regulation of plant stem diameter; a9) regulation of plant leaf angle; a10) regulation of plant height.
上述应用中,所述蛋白质M57可为b1)或b2)或b3):In the above application, the protein M57 can be b1) or b2) or b3):
b1)氨基酸序列是序列表中序列3所示的蛋白质;b1) The amino acid sequence is the protein shown in Sequence 3 in the sequence listing;
b2)在序列表中序列3所示的蛋白质的N端或/和C端连接标签得到的融合蛋白质;b2) a fusion protein obtained by linking a tag to the N-terminus or/and C-terminus of the protein shown in SEQ ID NO: 3 in the sequence listing;
b3)将序列表中序列3所示的氨基酸序列经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的与对铵的抵抗能力和/或产量和/或粒重和/或粒宽和/或穗长和/或穗粒数和/或叶片宽度和/或茎杆直径和/或叶夹角和/或株高相关的蛋白质。b3) The resistance to ammonium and/or the yield and/or the grain weight and/or the amino acid sequence obtained by substitution and/or deletion and/or addition of one or several amino acid residues in the amino acid sequence shown in Sequence 3 in the sequence listing Proteins related to grain width and/or ear length and/or grain number per ear and/or leaf width and/or stem diameter and/or leaf angle and/or plant height.
其中,序列表中序列3由241个氨基酸残基组成。Among them, sequence 3 in the sequence listing consists of 241 amino acid residues.
为了使b1)中的蛋白质便于纯化,可在序列表中序列3所示的蛋白质的氨基末端或羧基末端连接上如表1所示的标签。In order to facilitate purification of the protein in b1), a tag as shown in Table 1 can be attached to the amino terminus or carboxyl terminus of the protein shown in SEQ ID NO: 3 in the sequence listing.
表1.标签的序列Table 1. Sequence of tags
上述b3)中的蛋白质,所述一个或几个氨基酸残基的取代和/或缺失和/或添加为不超过10个氨基酸残基的取代和/或缺失和/或添加。For the protein in the above b3), the substitution and/or deletion and/or addition of one or several amino acid residues is the substitution and/or deletion and/or addition of no more than 10 amino acid residues.
上述b3)中的蛋白质可人工合成,也可先合成其编码基因,再进行生物表达得到。The protein in the above b3) can be obtained by artificial synthesis, or by first synthesizing its encoding gene and then biologically expressing it.
上述b3)中的蛋白质的编码基因可通过将序列表中序列2或序列1所示的DNA序列中缺失一个或几个氨基酸残基的密码子,和/或进行一个或几个碱基对的错义突变,和/或在其5′端和/或3′端连上表1所示的标签的编码序列得到。The coding gene of the protein in the above b3) can be obtained by deleting the codons of one or several amino acid residues in the DNA sequence shown in
本发明还保护编码所述蛋白质M57的核酸分子的应用,可为如下a1)-a10)中的至少一种:a1)调控植物对铵的抵抗能力;a2)调控植物产量;a3)调控植物粒重;a4)调控植物粒宽;a5)调控植物穗长;a6)调控植物穗粒数;a7)调控植物叶片宽度;a8)调控植物茎杆直径;a9)调控植物叶夹角;a10)调控植物株高。The present invention also protects the application of the nucleic acid molecule encoding the protein M57, which can be at least one of the following a1)-a10): a1) regulation of plant resistance to ammonium; a2) regulation of plant yield; a3) regulation of plant grain a4) control plant grain width; a5) control plant ear length; a6) control plant ear number; a7) control plant leaf width; a8) control plant stem diameter; a9) control plant leaf angle; a10) control Plant height.
上述应用中,编码所述蛋白质M57的核酸分子可为如下c1)-c6)任一所示的DNA分子:In the above application, the nucleic acid molecule encoding the protein M57 can be the DNA molecule shown in any of the following c1)-c6):
c1)编码区如序列表中序列2所示的DNA分子;c1) a DNA molecule whose coding region is shown in
c2)编码区如序列表中序列1所示的DNA分子;c2) a DNA molecule whose coding region is shown in
c3)核苷酸序列是序列表中序列2所示的DNA分子;c3) The nucleotide sequence is the DNA molecule shown in
c4)核苷酸序列是序列表中序列1所示的DNA分子;c4) The nucleotide sequence is the DNA molecule shown in
c5)与c1)或c2)或c3)或c4)限定的核苷酸序列具有75%或75%以上同一性,且编码所述蛋白质M57的DNA分子;c5) a DNA molecule having 75% or more identity with the nucleotide sequence defined in c1) or c2) or c3) or c4) and encoding the protein M57;
c6)在严格条件下与c1)或c2)或c3)或c4)限定的核苷酸序列杂交,且编码所述蛋白质M57的DNA分子。c6) A DNA molecule that hybridizes under stringent conditions to the nucleotide sequence defined in c1) or c2) or c3) or c4) and encodes said protein M57.
其中,所述核酸分子可以是DNA,如cDNA、基因组DNA或重组DNA;所述核酸分子也可以是RNA,如mRNA或hnRNA等。Wherein, the nucleic acid molecule can be DNA, such as cDNA, genomic DNA or recombinant DNA; the nucleic acid molecule can also be RNA, such as mRNA or hnRNA.
其中,序列表中序列2由726个核苷酸组成,序列表中序列1由726个核苷酸组成,序列表中序列2或序列1的核苷酸编码序列表中序列3所示的氨基酸序列。Among them,
本领域普通技术人员可以很容易地采用已知的方法,例如定向进化和点突变的方法,对本发明的编码所述蛋白质M57的核苷酸序列进行突变。那些经过人工修饰的,具有与本发明分离得到的所述蛋白质M57的核苷酸序列75%或者更高同一性的核苷酸,只要编码所述蛋白质M57,均是衍生于本发明的核苷酸序列并且等同于本发明的序列。Those of ordinary skill in the art can easily use known methods, such as directed evolution and point mutation methods, to mutate the nucleotide sequence encoding the protein M57 of the present invention. Those artificially modified nucleotides with 75% or higher identity to the nucleotide sequence of the protein M57 isolated by the present invention, as long as they encode the protein M57, are all derived from the nucleosides of the present invention acid sequences and are equivalent to the sequences of the present invention.
这里使用的术语“同一性”指与天然核酸序列的序列相似性。“同一性”包括与本发明的编码序列表的序列2所示的氨基酸序列组成的蛋白质M57的核苷酸序列具有75%或更高,或80%或更高,或85%或更高,或90%或更高,或95%或更高同一性的核苷酸序列。同一性可以用肉眼或计算机软件进行评价。使用计算机软件,两个或多个序列之间的同一性可以用百分比(%)表示,其可以用来评价相关序列之间的同一性。The term "identity" as used herein refers to sequence similarity to a native nucleic acid sequence. "Identity" includes 75% or more, or 80% or more, or 85% or more of the nucleotide sequence of the protein M57 consisting of the amino acid sequence shown in SEQ ID NO: 2 of the coding sequence listing of the present invention, or 90% or more, or 95% or more identical nucleotide sequences. Identity can be assessed with the naked eye or with computer software. Using computer software, the identity between two or more sequences can be expressed in percent (%), which can be used to assess the identity between related sequences.
上述任一所述的应用中,所述植物可为如下c1)至c5)中的任一种:c1)双子叶植物;c2)单子叶植物;c3)禾本科植物;c4)水稻;c5)水稻品种日本晴。In any of the above-mentioned applications, the plant can be any one of the following c1) to c5): c1) dicots; c2) monocots; c3) grasses; c4) rice; c5) Rice variety Nipponbare.
本发明还保护一种培育转基因植物的方法,可包括如下步骤:提高出发植物中所述蛋白质M57的表达量和/或活性,得到转基因植物;与出发植物相比,转基因植物对铵的抵抗能力增强和/或产量增加和/或粒重增加和/或粒宽增加和/或穗长增加和/或穗粒数增加和/或叶片宽度增加和/或茎杆直径增加和/或叶夹角增加和/或株高降低。The present invention also protects a method for cultivating transgenic plants, which may include the following steps: increasing the expression and/or activity of the protein M57 in the starting plant to obtain a transgenic plant; compared with the starting plant, the resistance of the transgenic plant to ammonium Enhancement and/or increased yield and/or increased grain weight and/or increased grain width and/or increased ear length and/or increased number of grains per ear and/or increased leaf width and/or increased stem diameter and/or leaf angle Increase and/or decrease in plant height.
上述方法中,所述“提高出发植物中蛋白质M57的表达量和/或活性”可通过多拷贝、改变启动子、调控因子或转基因的方法,达到提高出发植物中所述蛋白质M57的表达量和/或活性的效果。In the above-mentioned method, the described "improving the expression and/or activity of protein M57 in the starting plant" can achieve the improvement of the expression and/or activity of the protein M57 in the starting plant by means of multiple copies, changing promoters, regulatory factors or transgenes. /or active effect.
上述方法中,所述“提高出发植物中蛋白质M57的表达量和/或活性”可通过向出发植物中导入重组载体实现;所述重组载体为向表达载体插入编码蛋白质M57的核酸分子,得到的重组质粒。In the above method, the "improving the expression level and/or activity of protein M57 in the starting plant" can be realized by introducing a recombinant vector into the starting plant; the recombinant vector is to insert a nucleic acid molecule encoding protein M57 into the expression vector, and obtain recombinant plasmids.
上述方法中,所述编码蛋白质M57的核酸分子可为d1)或d3)或d5)或d6)所示的DNA分子:In the above method, the nucleic acid molecule encoding protein M57 can be the DNA molecule shown in d1) or d3) or d5) or d6):
d1)编码区如序列表中序列2所示的DNA分子;d1) a DNA molecule whose coding region is shown in
d3)核苷酸序列是序列表中序列2所示的DNA分子;d3) the nucleotide sequence is the DNA molecule shown in
d5)与d1)或d3)限定的核苷酸序列具有75%或75%以上同一性,且编码所述蛋白质M57的DNA分子;d5) a DNA molecule that has 75% or more identity with the nucleotide sequence defined in d1) or d3) and encodes the protein M57;
d6)在严格条件下与d1)或d3)限定的核苷酸序列杂交,且编码所述蛋白质M57的DNA分子。d6) A DNA molecule that hybridizes under stringent conditions to the nucleotide sequence defined by d1) or d3) and encodes said protein M57.
上述方法中,所述表达载体可为pCAMBIA1300载体。In the above method, the expression vector may be pCAMBIA1300 vector.
上述方法中,所述重组载体可为重组质粒pCAMBIA1300-MADS57-Resist。所述重组质粒pCAMBIA1300-MADS57-Resist可为将pCAMBIA1300载体的限制性内切酶BamHI识别序列和限制性内切酶SacI识别序列间的DNA小片段替换为核苷酸序列是序列表中序列2所示的DNA分子,得到的重组质粒。In the above method, the recombinant vector can be the recombinant plasmid pCAMBIA1300-MADS57-Resist. The recombinant plasmid pCAMBIA1300-MADS57-Resist can be a small DNA fragment between the restriction endonuclease BamHI recognition sequence and the restriction endonuclease SacI recognition sequence of the pCAMBIA1300 vector with the nucleotide sequence shown in
本发明还保护一种植物育种方法,可包括如下步骤:增加植物中所述蛋白质M57的表达量和/或活性,从而植物对铵的抵抗能力增强和/或产量增加和/或粒重增加和/或粒宽增加和/或穗长增加和/或穗粒数增加和/或叶片宽度增加和/或茎杆直径增加和/或叶夹角增加和/或株高降低。The present invention also protects a plant breeding method, which may include the steps of increasing the expression and/or activity of the protein M57 in plants, thereby enhancing the plant's resistance to ammonium and/or increasing yield and/or increasing grain weight and /or increased grain width and/or increased ear length and/or increased number of grains per ear and/or increased leaf width and/or increased stem diameter and/or increased leaf angle and/or decreased plant height.
上述方法中,所述“增加植物中蛋白质M57的表达量和/或活性”可通过多拷贝、改变启动子、调控因子或转基因的方法,达到增加植物中所述蛋白质M57的表达量和/或活性的效果。In the above method, the "increasing the expression and/or activity of protein M57 in plants" can increase the expression and/or the expression of protein M57 in plants by means of multiple copies, changing promoters, regulatory factors or transgenes. active effect.
上述任一所述调控植物对铵的抵抗能力可为提高植物对铵的抵抗能力。Any of the above-mentioned regulation and control of plant resistance to ammonium may be to improve plant resistance to ammonium.
上述任一所述植物可为如下c1)至c5)中的任一种:c1)双子叶植物;c2)单子叶植物;c3)禾本科植物;c4)水稻;c5)水稻品种日本晴。Any one of the plants described above may be any one of the following c1) to c5): c1) dicotyledonous plants; c2) monocotyledonous plants; c3) grasses; c4) rice; c5) rice variety Nipponbare.
上述任一所述叶夹角具体可为旗叶和所连接的叶鞘之间的夹角。The included angle of any of the above-mentioned leaves may specifically be the included angle between the flag leaf and the connected leaf sheath.
上述任一所述产量可为单穗产量。Any of the above-mentioned yields may be yield per ear.
向水稻品种日本晴中导入实施例提及的重组质粒pCAMBIA1300-MADS57-Resist,得到T0代转OsMADS57-R基因水稻;将T0代转OsMADS57-R基因水稻连续自交三代,得到T3代纯合转OsMADS57-R基因水稻。与水稻品种日本晴相比,在营养生长期,T3代纯合转OsMADS57-R基因水稻的生长更茁壮,叶片宽度显著增加,茎杆显著加粗(表现为茎杆直径显著增加);在成熟期,T3代纯合转OsMADS57-R基因水稻的株型更加紧凑,叶夹角显著增加,株高显著降低;穗粒收获后,T3代纯合转OsMADS57-R基因水稻的粒重和粒宽显著增加,穗长和穗粒数也显著增加,产量也显著增加。由此可见,蛋白质M57在调控水稻对铵的抵抗能力、产量、株高、粒重、粒宽、穗长、穗粒数、叶片宽度、茎杆直径和叶夹角中具有重要的作用。本发明具有重要的应用价值。The recombinant plasmid pCAMBIA1300-MADS57-Resist mentioned in the example was introduced into the rice variety Nipponbare to obtain T 0 generation transgenic OsMADS57- R gene rice ; Co-transformed rice with OsMADS57-R gene. Compared with the rice variety Nipponbare, in the vegetative growth period, the T 3 generation homozygous transgenic rice with OsMADS57-R gene grew stronger, with significantly increased leaf width and thicker stems (shown as a significant increase in stem diameter); The plant type of the T 3 generation homozygous transgenic rice with OsMADS57-R gene was more compact, the leaf angle was significantly increased, and the plant height was significantly decreased ; after the ear grains were harvested, the grain weight and The grain width was significantly increased, the ear length and the number of grains per ear were also significantly increased, and the yield was also significantly increased. It can be seen that protein M57 plays an important role in regulating rice resistance to ammonium, yield, plant height, grain weight, grain width, ear length, grain number per ear, leaf width, stem diameter and leaf angle. The invention has important application value.
附图说明Description of drawings
图1为T3代纯合转OsMADS57-R基因水稻对铵的抵抗能力。Figure 1 shows the resistance to ammonium of T 3 generation homozygous transgenic rice with OsMADS57-R gene.
图2为营养生长期和成熟期水稻的表型。Figure 2 shows the phenotype of rice in vegetative growth and mature stages.
图3为水稻的叶片表型和穗粒表型,以及叶片宽度、粒重、粒长和粒宽的统计结果。Figure 3 shows the leaf phenotype and ear grain phenotype of rice, as well as the statistical results of leaf width, grain weight, grain length and grain width.
图4为水稻的茎杆表型和茎节间表型,以及穗粒数的统计结果。Figure 4 shows the statistical results of the stem phenotype and stem internode phenotype of rice, as well as the number of grains per ear.
具体实施方式Detailed ways
以下的实施例便于更好地理解本发明,但并不限定本发明。The following examples facilitate a better understanding of the present invention, but do not limit the present invention.
下述实施例中的实验方法,如无特殊说明,均为常规方法。The experimental methods in the following examples are conventional methods unless otherwise specified.
下述实施例中所用的试验材料,如无特殊说明,均为自常规生化试剂商店购买得到的。The test materials used in the following examples were purchased from conventional biochemical reagent stores unless otherwise specified.
下述实施例中的定量试验,均设置三次重复实验,结果取平均值。Quantitative experiments in the following examples are all set up to repeat the experiments three times, and the results are averaged.
植物cDNA合成试剂盒为TOYOBO公司的产品。Plant cDNA synthesis kit is a product of TOYOBO company.
高保真Phusion DNA聚合酶为Thermo公司的产品。High-fidelity Phusion DNA polymerase is a product of Thermo.
DNA凝胶纯化柱和pGEM-T载体为Promega公司的产品。DNA gel purification column and pGEM-T vector are products of Promega Corporation.
叶夹角是指旗叶和所连接的叶鞘之间的夹角。Leaf angle refers to the angle between the flag leaf and the attached leaf sheath.
实施例1、T3代纯合转OsMADS57-R基因水稻的获得及其对铵的抵抗能力和农艺性状的鉴定Example 1. Acquisition of T 3 generation homozygous transgenic rice with OsMADS57-R gene and identification of its resistance to ammonium and agronomic traits
一、重组质粒pGEM-T-MADS57的构建1. Construction of recombinant plasmid pGEM-T-MADS57
1、以水稻品种日本晴(以下简称日本晴)的10天苗为实验材料,用Trizol试剂提取总RNA,得到日本晴的RNA。取日本晴的RNA,先用DNA凝胶检测RNA质量,然后用nanodrop分光光度计测定RNA的浓度。1. The 10-day seedlings of the rice variety Nipponbare (hereinafter referred to as Nipponbare) were used as experimental materials, and total RNA was extracted with Trizol reagent to obtain the RNA of Nipponbare. The RNA of Nipponbare was taken, the quality of RNA was detected by DNA gel first, and then the concentration of RNA was determined by nanodrop spectrophotometer.
2、完成步骤1后,取1μL日本晴的RNA,用植物cDNA合成试剂盒进行反转录,得到20μL cDNA产物(cDNA产物即日本晴的cDNA)。2. After completing
3、完成步骤2后,以cDNA产物为模板,MADS57-Fp:5′-atggggagggggaagatagt-3′和MADS57-Rp:5′-ttaaggcagatgaagtccca-3′为引物,采用高保真Phusion DNA聚合酶进行PCR扩增,得到PCR扩增产物。3. After completing
反应体系为50μL。各个引物在反应体系中的浓度为10μM。The reaction volume was 50 μL. The concentration of each primer in the reaction system was 10 μM.
反应程序为:98℃30s;98℃10s,55℃15s,72℃30s,35次循环;72℃5min。The reaction program was: 98°C for 30s; 98°C for 10s, 55°C for 15s, 72°C for 30s, 35 cycles; 72°C for 5 min.
4、完成步骤3后,用DNA凝胶纯化柱回收PCR扩增产物中约726bp的DNA片段。4. After completing step 3, use a DNA gel purification column to recover a DNA fragment of about 726 bp in the PCR amplification product.
5、将步骤4回收的DNA片段和pGEM-T载体进行连接,得到重组质粒pGEM-T-MADS57。5. Connect the DNA fragment recovered in step 4 with the pGEM-T vector to obtain the recombinant plasmid pGEM-T-MADS57.
将重组质粒pGEM-T-MADS57进行测序。测序结果表明,重组质粒pGEM-T-MADS57中含有序列表中序列1所示的DNA分子。序列表中序列1所示的DNA分子即OsMADS57基因。The recombinant plasmid pGEM-T-MADS57 was sequenced. The sequencing results showed that the recombinant plasmid pGEM-T-MADS57 contained the DNA molecule shown in SEQ ID NO: 1 in the sequence listing. The DNA molecule shown in
二、重组质粒pGEM-T-MADS57/Resist的构建2. Construction of recombinant plasmid pGEM-T-MADS57/Resist
1、根据MADS57基因上miR444(核苷酸序列为:5′-GCAGCAAGCTTGAGGCAGCAACUGCA-3′)结合的靶位点,设计并合成MADS57-Resist-Fp:5′-gcCgcCTCcCtCCgCcaAcaGctCcaTaaTCtCcaagaaagccacaagcaactg-3′和MADS57-Resist-Rp:5′-agattatggagctgttggcggagggaggcggcctccctctgccaaatcttaa-3′。1. According to the target site of miR444 (nucleotide sequence: 5′-GCAGCAAGCTTGAGGCAGCAACUGCA-3′) on the MADS57 gene, design and synthesize MADS57-Resist-Fp: 5′-gcCgcCTCcCtCCgCcaAcaGctCcaTaaTCtCcaagaaagccacaagcaactg-3′ and MADS57-Resist-Rp : 5'-agattatggagctgttggcggagggaggcggcctccctctgccaaatcttaa-3'.
2、第一轮PCR扩增反应2. The first round of PCR amplification reaction
(1)以20ng重组质粒pGEM-T-MADS57为模板,MADS57-Fp和MADS57-Rp为引物,采用高保真Phusion DNA聚合酶进行PCR扩增,得到PCR扩增产物甲。(1) Using 20ng of recombinant plasmid pGEM-T-MADS57 as template and MADS57-Fp and MADS57-Rp as primers, high-fidelity Phusion DNA polymerase was used for PCR amplification to obtain PCR amplification product A.
(2)以20ng重组质粒pGEM-T-MADS57为模板,MADS57-Resist-Fp和MADS57-Resist-Rp为引物,采用高保真Phusion DNA聚合酶进行PCR扩增,得到PCR扩增产物乙。(2) Using 20ng of recombinant plasmid pGEM-T-MADS57 as template, MADS57-Resist-Fp and MADS57-Resist-Rp as primers, high-fidelity Phusion DNA polymerase was used for PCR amplification to obtain PCR amplification product B.
步骤(1)和(2)中,反应体系均为50μL;各个引物在反应体系中的浓度均为10μM。In steps (1) and (2), the reaction system is 50 μL; the concentration of each primer in the reaction system is 10 μM.
步骤(1)和(2)中,反应程序均为:98℃30s;98℃10s,55℃15s,72℃30s,35次循环;72℃5min。In steps (1) and (2), the reaction procedures are: 98°C for 30s; 98°C for 10s, 55°C for 15s, 72°C for 30s, 35 cycles; 72°C for 5 min.
3、回收3. Recycling
(1)用DNA凝胶纯化柱回收PCR扩增产物甲中约300bp的DNA片段甲。(1) A DNA fragment A of about 300 bp in the PCR amplification product A was recovered by a DNA gel purification column.
(2)用DNA凝胶纯化柱回收PCR扩增产物乙中约400bp的DNA片段乙。(2) A DNA fragment B of about 400 bp in PCR amplification product B was recovered by a DNA gel purification column.
4、第二轮PCR扩增反应4. The second round of PCR amplification reaction
(1)将50ng DNA片段甲和50ng DNA片段乙充分混合,得到混合DNA。(1) Mix 50 ng of DNA fragment A and 50 ng of DNA fragment B thoroughly to obtain mixed DNA.
(2)以100ng混合DNA为模板,MADS57-Fp和MADS57-Rp为引物,采用高保真PhusionDNA聚合酶进行PCR扩增,得到PCR扩增产物丙。(2) Using 100ng of mixed DNA as template and MADS57-Fp and MADS57-Rp as primers, high-fidelity PhusionDNA polymerase was used for PCR amplification to obtain PCR amplification product C.
反应体系为50μL。各个引物在反应体系中的浓度为10μM。The reaction volume was 50 μL. The concentration of each primer in the reaction system was 10 μM.
反应程序均为:98℃30s;98℃10s,55℃15s,72℃30s,35次循环;72℃5min。The reaction procedures were: 98°C for 30s; 98°C for 10s, 55°C for 15s, 72°C for 30s, 35 cycles; 72°C for 5 min.
5、回收5. Recycling
用DNA凝胶纯化柱回收PCR扩增产物丙中约700bp的DNA片段丙。The DNA fragment C of about 700 bp in the PCR amplification product C was recovered with a DNA gel purification column.
6、将步骤4回收的DNA片段丙和pGEM-T载体进行连接,得到重组质粒pGEM-T-MADS57/Resist。6. Connect the DNA fragment C recovered in step 4 with the pGEM-T vector to obtain the recombinant plasmid pGEM-T-MADS57/Resist.
将重组质粒pGEM-T-MADS57/Resist进行测序。测序结果表明,重组质粒pGEM-T-MADS57/Resist中含有序列表中序列2所示的DNA分子。The recombinant plasmid pGEM-T-MADS57/Resist was sequenced. The sequencing results show that the recombinant plasmid pGEM-T-MADS57/Resist contains the DNA molecule shown in
序列表中序列2所示的DNA分子即OsMADS57-R基因。The DNA molecule shown in
OsMADS57-R基因和OsMADS57基因均编码序列表中序列3所示的蛋白质M57。Both the OsMADS57-R gene and the OsMADS57 gene encode the protein M57 shown in SEQ ID NO: 3 in the sequence listing.
三、重组质粒pCAMBIA1300-MADS57-Resist的构建3. Construction of recombinant plasmid pCAMBIA1300-MADS57-Resist
1、以重组质粒pGEM-T-MADS57/Resist为模板,采用MADS57-重组-Fp:5′-gaacacgggggactctagagatggggagggggaagatagt-3′和MADS57-重组-Rp:5′-cgatcggggaaattcgagctttaaggcagatgaagtccca-3′组成的引物对进行PCR扩增,得到PCR扩增产物。1. Using the recombinant plasmid pGEM-T-MADS57/Resist as the template, PCR amplification was carried out using a primer pair consisting of MADS57-recombination-Fp: 5′-gaacacgggggactctagagatggggagggggaagatagt-3′ and MADS57-recombination-Rp: 5′-cgatcggggaaattcgagctttaaggcagatgaagtccca-3′ to obtain PCR amplification products.
2、用DNA凝胶纯化柱回收步骤1得到的PCR扩增产物中约750bp的DNA片段。2. Use a DNA gel purification column to recover the DNA fragment of about 750 bp in the PCR amplification product obtained in
3、用限制性内切酶BamHI和SacI酶切pCAMBIA1300载体,回收大小约10kb的载体骨架。3. The pCAMBIA1300 vector was digested with restriction enzymes BamHI and SacI, and the vector backbone with a size of about 10 kb was recovered.
4、采用GIBSON公司的无缝克隆体系进行同源重组反应,将步骤2回收的DNA片段整合至步骤3回收的载体骨架,得到重组质粒pCAMBIA1300-MADS57-Resist。4. Use the seamless cloning system of GIBSON to carry out homologous recombination reaction, and integrate the DNA fragment recovered in
将重组质粒pCAMBIA1300-MADS57-Resist进行测序。根据测序结果,对重组质粒pCAMBIA1300-MADS57-Resist进行结构描述如下:将pCAMBIA1300载体的限制性内切酶BamHI识别序列和限制性内切酶SacI识别序列间的DNA小片段替换为核苷酸序列是序列表中序列2所示的DNA分子(序列表中序列2所示的DNA分子即OsMADS57-R基因)。The recombinant plasmid pCAMBIA1300-MADS57-Resist was sequenced. According to the sequencing results, the structure of the recombinant plasmid pCAMBIA1300-MADS57-Resist is described as follows: Replace the small DNA fragment between the restriction endonuclease BamHI recognition sequence and the restriction endonuclease SacI recognition sequence of the pCAMBIA1300 vector with the nucleotide sequence: The DNA molecule shown in the
重组质粒pCAMBIA1300-MADS57-Resist中,由35S启动子驱动OsMADS57-R基因的表达。重组质粒pCAMBIA1300-MADS57-Resist表达序列表中序列3所示的蛋白质M57。In the recombinant plasmid pCAMBIA1300-MADS57-Resist, the 35S promoter drives the expression of the OsMADS57-R gene. The recombinant plasmid pCAMBIA1300-MADS57-Resist expresses the protein M57 shown in sequence 3 in the sequence listing.
四、重组农杆菌的获得Fourth, the acquisition of recombinant Agrobacterium
将重组质粒pCAMBIA1300-MADS57-Resist导入根癌农杆菌EHA105,得到重组农杆菌,命名为EHA105/pCAMBIA1300-MADS57-Resist。The recombinant plasmid pCAMBIA1300-MADS57-Resist was introduced into Agrobacterium tumefaciens EHA105 to obtain recombinant Agrobacterium, which was named EHA105/pCAMBIA1300-MADS57-Resist.
将pCAMBIA1300载体导入根癌农杆菌EHA105,得到重组农杆菌,命名为EHA105/pCAMBIA1300。The pCAMBIA1300 vector was introduced into Agrobacterium tumefaciens EHA105 to obtain a recombinant Agrobacterium, which was named EHA105/pCAMBIA1300.
五、T0代拟转OsMADS57-R基因水稻的获得5. Acquisition of OsMADS57-R gene transgenic rice in T 0 generation
采用Hiei等的方法(Hiei Y,Ohta S,Komari T&Kumashiro T.Efficienttransformation of rice(Oryza sativa L.)mediated by Agrobacterium and sequenceanalysis of the boundaries of the T-DNA.Plant J.1994,6:271-282)将EHA105/pCAMBIA1300-MADS57-Resist转化日本晴,得到T0代拟转OsMADS57-R基因水稻。Using the method of Hiei et al. (Hiei Y, Ohta S, Komari T & Kumashiro T. Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA. Plant J. 1994, 6:271-282) EHA105/pCAMBIA1300-MADS57-Resist was transformed into Nipponbare to obtain the OsMADS57-R gene transgenic rice of T 0 generation.
六、T0代拟转OsMADS57-R基因水稻的实时定量PCR检测6. Real-time quantitative PCR detection of OsMADS57-R gene transgenic rice in T 0 generation
随机选取10个T0代拟转OsMADS57-R基因水稻(分别命名为OsMADS57-OE1-T0至OsMADS57-OE10-T0)进行实时定量PCR检测,具体步骤如下:Randomly select 10 T 0 generations to be transfected with OsMADS57-R gene rice (named respectively OsMADS57-OE1-T 0 to OsMADS57-OE10-T 0 ) for real-time quantitative PCR detection. The specific steps are as follows:
1、分别以10个T0代拟转OsMADS57-R基因水稻的10天苗实验材料,用Trizol试剂提取总RNA,然后用植物cDNA合成试剂盒进行反转录,得到各个T0代拟转OsMADS57-R基因水稻的cDNA。1. The 10-day seedling experimental materials of 10 T 0 generations to be transfected with OsMADS57-R gene rice were used to extract total RNA with Trizol reagent, and then reverse transcribed with plant cDNA synthesis kit to obtain each T 0 generation to be transfected with OsMADS57 - cDNA of the R gene rice.
2、使用RT-qPCR技术分别检测10个T0代拟转OsMADS57-R基因水稻的cDNA中OsMADS57-R基因的相对表达量(以OsACTIN基因作为内参基因)。检测OsMADS57-R基因的引物为OsMADS57-qF:5′-CGAAGCGTCGGAACGGGCTT-3′和OsMADS57-qR:5′-AGGCCAGAAAGCTCCTCACCC-3′。检测OsACTIN基因的引物为OsACTIN-qF:5′-AGGAAGGCTGGAAGAGGACC-3′和OsACTIN-qR:5′-CGGGAAATTGTGAGGGACAT-3′。2. Using RT-qPCR technology to detect the relative expression of OsMADS57-R gene in 10 T 0 generation rice cDNAs to be transfected with OsMADS57-R gene (with OsACTIN gene as internal reference gene). The primers for OsMADS57-R gene detection were OsMADS57-qF: 5'-CGAAGCGTCGGAACGGGCTT-3' and OsMADS57-qR: 5'-AGGCCAGAAAGCTCCTCACCC-3'. The primers for OsACTIN gene detection were OsACTIN-qF: 5'-AGGAAGGCTGGAAGAGGACC-3' and OsACTIN-qR: 5'-CGGGAAATTGTGAGGGACAT-3'.
3、按照上述方法,将T0代拟转OsMADS57-R基因水稻替换为日本晴,其它步骤均不变,得到日本晴中OsMADS57-R基因的相对表达量。3. According to the above method, replace the OsMADS57-R gene rice in the T 0 generation with Nipponbare, and other steps remain unchanged to obtain the relative expression level of the OsMADS57-R gene in Nipponbare.
以日本晴中OsMADS57-R基因的相对表达量作为1,统计其它水稻植株中OsMADS57-R基因的相对表达量。结果表明,与日本晴相比,10个T0代拟转OsMADS57-R基因水稻中OsMADS57-R基因的相对表达量均显著增加。Taking the relative expression level of OsMADS57-R gene in Nipponbare as 1, the relative expression level of OsMADS57-R gene in other rice plants was calculated. The results showed that, compared with Nipponbare, the relative expression of OsMADS57-R gene in the 10 T 0 generations to be transfected with OsMADS57-R gene was significantly increased.
上述结果表明,OsMADS57-OE1-T0至OsMADS57-OE10-T0均为T0代转OsMADS57-R基因水稻。The above results indicated that OsMADS57-OE1-T 0 to OsMADS57-OE10-T 0 were all T 0 generation transgenic OsMADS57-R rice.
七、T3代纯合转OsMADS57-R基因水稻的获得及实时定量PCR检测7. The acquisition of OsMADS57-R gene transgenic rice with T 3 generation homozygous and real-time quantitative PCR detection
1、将OsMADS57-OE1-T0至OsMADS57-OE5-T0经连续三代自交,获得T3代纯合转OsMADS57-R基因水稻,分别命名为OsMADS57-OE1-T3至OsMADS57-OE5-T3。1. The OsMADS57-OE1-T 0 to OsMADS57-OE5-T 0 were selfed for three consecutive generations to obtain the T 3 generation homozygous transgenic OsMADS57-R gene rice, which were named OsMADS57-OE1-T 3 to OsMADS57-OE5-T respectively 3 .
2、按照步骤六的方法,对OsMADS57-OE1-T3至OsMADS57-OE5-T3和日本晴分别进行实时定量PCR检测。2. Perform real-time quantitative PCR detection on OsMADS57-OE1-T 3 to OsMADS57-OE5-T 3 and Nipponbare respectively according to the method in step 6.
检测结果表明,与日本晴相比,OsMADS57-OE1-T3至OsMADS57-OE5-T3中OsMADS57-R基因的相对表达量均显著增加。The detection results showed that compared with Nipponbare, the relative expression of OsMADS57-R gene in OsMADS57-OE1-T 3 to OsMADS57-OE5-T 3 was significantly increased.
按照上述方法,将EHA105/pCAMBIA1300-MADS57-Resist替换为EHA105/pCAMBIA1300,其它步骤均相同,得到T3代转空载体水稻的植株,以下简称转空载体水稻。According to the above method, EHA105/pCAMBIA1300-MADS57 - Resist was replaced with EHA105/pCAMBIA1300.
八、T3代纯合转OsMADS57-R基因水稻对铵的抵抗能力和农艺性状的鉴定8. Identification of ammonium resistance and agronomic traits in T 3 generation homozygous transgenic rice with OsMADS57-R gene
待测水稻为OsMADS57-OE1-T3、OsMADS57-OE3-T3、转空载体水稻或日本晴。The rice to be tested is OsMADS57-OE1-T 3 , OsMADS57-OE3-T 3 , empty vector rice or Nipponbare.
1、T3代纯合转OsMADS57-R基因水稻对铵的抵抗能力1. The resistance to ammonium in rice homozygous for T 3 transgenic OsMADS57-R gene
铵对水稻的毒害效应的主要指标是叶片枯黄,因此可以通过叶片枯黄的程度判断铵对水稻的毒害程度。水稻叶片枯黄程度越高,则说明铵对水稻的毒害程度越大,水稻对铵的抵抗能力越低。The main indicator of the toxic effect of ammonium on rice is leaf yellowing, so the degree of ammonium toxicity to rice can be judged by the degree of leaf yellowing. The higher the degree of yellowing of rice leaves, the greater the toxicity of ammonium to rice, and the lower the resistance of rice to ammonium.
(1)取50粒待测水稻的种子,脱壳,然后用10%次氯酸钠消毒45min,无菌水冲洗5次,每次5-10min。(1) Take 50 seeds of rice to be tested, dehull, then disinfect with 10% sodium hypochlorite for 45 minutes, and rinse with sterile water for 5 times, 5-10 minutes each time.
(2)取完成步骤(1)的、饱满的待测水稻种子30粒,播种于3个无菌培养瓶,每瓶10粒种子。每个培养瓶的培养基为含0.25mM NH4 +的培养基、含0.5mM NH4 +的培养基、含1mM NH4 +的培养基、含2.5mM NH4 +的培养基或含5mM NH4 +的培养基。(2) Take 30 rice seeds to be tested that have completed step (1) and are full, and sown in 3 sterile culture bottles, with 10 seeds per bottle. The medium for each flask is 0.25mM NH4 + , 0.5mM NH4 + , 1 mM NH4 + , 2.5mM NH4 + , or 5mM NH4+ 4+ medium .
含0.25mM NH4 +的培养基:向1L超纯水10g蔗糖和0.39gM531型无氮素的MS固体粉末(PhytoTechnology Laboratories,USA),磁力搅拌器上溶解完全后,用KOH水溶液调节pH值至5.7;然后加入3g植物凝胶和0.25mL浓度为1M的NH4Cl水溶液,113℃高温灭菌30min。Medium containing 0.25 mM NH 4 + : add 1 L of ultrapure water, 10 g of sucrose and 0.39 g of M531 nitrogen-free MS solid powder (PhytoTechnology Laboratories, USA), after the complete dissolution on a magnetic stirrer, adjust the pH to 5.7; then add 3 g of plant gel and 0.25 mL of 1 M NH 4 Cl aqueous solution, and sterilize at 113° C. for 30 min.
含0.5mM NH4 +的培养基:按照含0.25mM NH4 +的培养基的制备方法,将“0.25mL浓度为1M的NH4Cl水溶液”替换为“0.5mL浓度为1M的NH4Cl水溶液”,其它均不变。Medium with 0.5 mM NH4 + : Follow the preparation method for medium with 0.25 mM NH4 + , replacing "0.25 mL of 1 M aqueous NH4Cl " with "0.5 mL of 1 M aqueous NH4Cl " ”, other things remain unchanged.
含1mM NH4 +的培养基:按照含0.25mM NH4 +的培养基的制备方法,将“0.25mL浓度为1M的NH4Cl水溶液”替换为“1mL浓度为1M的NH4Cl水溶液”,其它均不变。Medium with 1 mM NH4 + : Following the preparation method for medium with 0.25 mM NH4 + , replace "0.25 mL of 1 M aqueous NH4Cl " with "1 mL of 1 M aqueous NH4Cl ", Others remain unchanged.
含2.5mM NH4 +的培养基:按照含0.25mM NH4 +的培养基的制备方法,将“0.25mL浓度为1M的NH4Cl水溶液”替换为“2.5mL浓度为1M的NH4Cl水溶液”,其它均不变。Medium with 2.5 mM NH4 + : Follow the preparation method for medium with 0.25 mM NH4 + , replacing "0.25 mL of 1 M aqueous NH4Cl " with "2.5 mL of 1 M aqueous NH4Cl " ”, other things remain unchanged.
含5mM NH4 +的培养基:按照含0.25mM NH4 +的培养基的制备方法,将“0.25mL浓度为1M的NH4Cl水溶液”替换为“5mL浓度为1M的NH4Cl水溶液”,其它均不变。Medium with 5 mM NH4 + : Following the preparation method for medium with 0.25 mM NH4 + , replace "0.25 mL of 1 M aqueous NH4Cl " with "5 mL of 1 M aqueous NH4Cl ", Others remain unchanged.
(3)完成步骤(2)后,将培养瓶置于恒温培养箱,25℃、光暗交替培养14天,观察水稻叶片的枯黄程度。(3) After step (2) is completed, the culture bottle is placed in a constant temperature incubator, and cultured at 25° C. and light and dark alternately for 14 days, and the degree of yellowing of the rice leaves is observed.
光暗交替培养即光培养和暗培养交替,条件为:12h光照培养/12h黑暗培养;光照培养时的光照强度为90μE/m2/s。The light-dark culture was alternated between light and dark, and the conditions were: 12h light culture/12h dark culture; the light intensity during light culture was 90 μE/m 2 /s.
部分结果见图1(A为不同铵根离子浓度下,水稻根的生长状态;B为铵根离子浓度为5mM时,水稻叶片的生长状态)。结果表明,与日本晴相比,OsMADS57-OE1-T3、OsMADS57-OE2-T3和OsMADS57-OE3-T3对铵的抵抗能力显著增强;日本晴和转空载体水稻对铵的抵抗能力无显著差异。随着铵根离子浓度的增加,铵对日本晴、转空载体水稻、OsMADS57-OE1-T3、OsMADS57-OE2-T3或OsMADS57-OE3-T3的毒害程度也有一定程度的增加。Part of the results are shown in Figure 1 (A is the growth state of rice roots under different ammonium ion concentrations; B is the growth state of rice leaves when the ammonium ion concentration is 5mM). The results showed that, compared with Nipponbare, OsMADS57-OE1-T 3 , OsMADS57-OE2-T 3 and OsMADS57-OE3-T 3 had significantly enhanced resistance to ammonium; Nipponbare and empty carrier rice had no significant difference in ammonium resistance. . With the increase of ammonium ion concentration, the toxicity of ammonium to Nipponbare, empty carrier rice, OsMADS57-OE1-T 3 , OsMADS57-OE2-T 3 or OsMADS57-OE3-T 3 also increased to a certain extent.
2、农艺性状鉴定2. Identification of agronomic traits
实验重复三次取平均值,每次重复的步骤如下:The experiment was repeated three times to obtain the average value, and the steps for each repetition were as follows:
(1)将15粒待测水稻的种子播种于大田,常规田间管理,然后分别在营养生长期和成熟期对待测水稻的叶片、茎杆、株型、叶夹角、株高进行比较及统计,观察收获的穗粒表型并统计粒重、粒长、粒宽和穗粒数。(1) 15 seeds of the rice to be tested were sown in the field, and routine field management was performed, and then the leaves, stems, plant types, leaf angles, and plant heights of the rice to be tested were compared and counted in the vegetative growth period and the mature period respectively. , observe the phenotype of the harvested grains per ear and count the grain weight, grain length, grain width and number of grains per ear.
营养生长期,部分待测水稻的表型见图2中A(WT为日本晴)。During the vegetative growth period, the phenotypes of some of the rice to be tested are shown in Figure 2, A (WT is Nipponbare).
成熟期,部分待测水稻的表型见图2中B(WT为日本晴)。At the maturity stage, the phenotypes of some of the rice to be tested are shown in B in Figure 2 (WT is Nipponbare).
部分待测水稻的叶片表型见图3中A(WT为日本晴)。The leaf phenotypes of some of the tested rice are shown in Figure 3, A (WT is Nipponbare).
部分待测水稻的叶片宽度的统计结果见图3中B(WT为日本晴)。The statistical results of the leaf width of some rice to be tested are shown in Figure 3, B (WT is Nipponbare).
部分待测水稻的穗粒表型见图3中C(WT为日本晴)。The panicle grain phenotype of some rice to be tested is shown in Figure 3 C (WT is Nipponbare).
部分待测水稻的粒重统计结果见图3中D的左图(WT为日本晴),粒长统计结果见图3中D的中图(WT为日本晴),粒宽统计结果见图3中D的右图(WT为日本晴)。The statistical results of grain weight of some rice to be tested are shown in the left panel of D in Figure 3 (WT is Nipponbare), the statistical results of grain length are shown in the middle panel of D in Figure 3 (WT is Nipponbare), and the statistical results of grain width are shown in Figure 3 in D (WT is Nipponbare).
部分待测水稻的穗粒数统计见图4中A(WT为日本晴)。The statistics of grain number per panicle of some rice to be tested are shown in Figure 4 A (WT is Nipponbare).
部分待测水稻的茎杆表型见图4中B(WT为日本晴)。The stem phenotypes of some of the tested rice are shown in Figure 4, B (WT is Nipponbare).
部分待测水稻的茎节间长度见图4中C(WT为日本晴)。The stem internode length of some rice to be tested is shown in Figure 4 C (WT is Nipponbare).
结果表明,在营养生长期,与日本晴相比,OsMADS57-OE1-T3和OsMADS57-OE3-T3的生长更茁壮,叶片宽度显著增加,茎杆显著加粗(表现为茎杆直径显著增加);在成熟期,与日本晴相比,OsMADS57-OE1-T3和OsMADS57-OE3-T3的株型更加紧凑,叶夹角显著增加,株高显著降低;穗粒收获后,与日本晴相比,OsMADS57-OE1-T3和OsMADS57-OE3-T3的粒重和粒宽显著增加,穗长和穗粒数也显著增加,由此可知,与日本晴相比,OsMADS57-OE1-T3和OsMADS57-OE3-T3的单穗产量显著增加。日本晴和转空载体水稻的上述农艺性状无显著差异。The results showed that in the vegetative growth period, OsMADS57-OE1-T 3 and OsMADS57-OE3-T 3 grew more vigorously, with significantly increased leaf width and significantly thicker stems (shown as a significant increase in stem diameter) compared with Nipponbare. ; At the mature stage, OsMADS57-OE1-T 3 and OsMADS57-OE3-T 3 had more compact plant types, significantly increased leaf angle, and decreased plant height compared with Nipponbare; The grain weight and grain width of OsMADS57-OE1-T 3 and OsMADS57 -OE3-T 3 were significantly increased, and the ear length and grain number per ear were also significantly increased. The yield per panicle of OE3-T 3 was significantly increased. There was no significant difference in the above agronomic traits between Nipponbare and empty carrier rice.
<110> 中国科学院微生物研究所<110> Institute of Microbiology, Chinese Academy of Sciences
<120> 蛋白质M57在调控水稻对铵的抵抗能力中的应用<120> Application of protein M57 in regulating rice resistance to ammonium
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