CN111849951B - L-threonine aldolase mutant R318M and its application - Google Patents
L-threonine aldolase mutant R318M and its application Download PDFInfo
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- CN111849951B CN111849951B CN202010324327.XA CN202010324327A CN111849951B CN 111849951 B CN111849951 B CN 111849951B CN 202010324327 A CN202010324327 A CN 202010324327A CN 111849951 B CN111849951 B CN 111849951B
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- threonine aldolase
- mutant
- leu
- glu
- gene
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Abstract
Description
技术领域technical field
本发明涉及苏氨酸醛缩酶,具体涉及一种L-苏氨酸醛缩酶突变体R318M及其应用。The present invention relates to threonine aldolase, in particular to an L-threonine aldolase mutant R318M and its application.
背景技术Background technique
屈昔多巴(L-threo-DOPS,L-threo-3,4-dihydroxyphenylserine)具有两个手性中心的β-羟基氨基酸,是FDA在2014年批准的抗帕金森氏病药物,用于改善由帕金森病引起的步态僵直和直立性头晕;改善由Shy-Drager综合征或家族性淀粉样神经病所致的直立性低血压、直立性头晕和昏厥;改善血液透析患者由于直立性低血压引发的头晕和乏力。Droxidopa (L-threo-DOPS, L-threo-3,4-dihydroxyphenylserine) is a β-hydroxyamino acid with two chiral centers and is an anti-Parkinson's disease drug approved by the FDA in 2014 for improving the Stiff gait and orthostatic dizziness due to Parkinson's disease; improvement in orthostatic hypotension, orthostatic dizziness and syncope due to Shy-Drager syndrome or familial amyloid neuropathy; improvement in patients with hemodialysis due to orthostatic hypotension Dizziness and fatigue caused.
目前,屈昔多巴的合成方法主要包括化学合成和酶催化法。其中,化学合成法主要是通过加成反应,酯化反应和化学拆分来得到手性的屈昔多巴,虽然操作简单,但是反应过程中用到了大量的水、重金属和剧毒的硫化氢,并且有大量的光学异构体作为副产物,不符合目前和将来国家提倡和推进的原子经济学和环境保护政策。而酶催化法具有条件温和、用水量少(仅为化学法的十分之一)、没有重金属污染、不使用剧毒化学品、手性选择高等诸多优点,具有很好的应用前景。At present, the synthetic methods of droxidopa mainly include chemical synthesis and enzymatic catalysis. Among them, the chemical synthesis method mainly obtains chiral droxidopa through addition reaction, esterification reaction and chemical resolution. Although the operation is simple, a large amount of water, heavy metals and highly toxic hydrogen sulfide are used in the reaction process. , and there are a large number of optical isomers as by-products, which do not conform to the atomic economics and environmental protection policies advocated and promoted by the country at present and in the future. The enzyme catalysis method has many advantages such as mild conditions, less water consumption (only one tenth of the chemical method), no heavy metal pollution, no use of highly toxic chemicals, and high chiral selection, and has a good application prospect.
不对称C-C键的形成是合成有机化学中最具挑战性的反应之一。酶醛醇加成反应为合成具有不对称C-C键的化合物,特别是各种手性β-羟基氨基酸提供了巨大的机会。苏氨酸醛缩酶有着十分广泛的应用潜力,它可以催化合成手性的医药关键中间体β-羟基-α-氨基酸。根据苏氨酸醛缩酶对底物苏氨酸α碳上的立体专一性可将该酶分为L型和D型两类。L-苏氨酸醛缩酶(L-TA)是吡咯醛5'-磷酸(PLP)依赖性醛缩酶,可一步催化由甘氨酸和多种醛类衍生的各种β-羟基-α-L-氨基酸的光学合成。对于烷基醛,L-TA总是可以提供出色的立体选择性。然而,对于芳族醛合成的β-羟基-α-L-氨基酸,L-TA在Cα处具有高度立体选择性(>99%非对映异构体过量,de),而在Cβ处表现出中等到低的立体选择性(约10-45%de),特别是对于那些带有给电子基团的芳族基团,例如L-threo-DOPS。The formation of asymmetric CC bonds is one of the most challenging reactions in synthetic organic chemistry. Enzymatic aldol additions offer enormous opportunities to synthesize compounds with asymmetric CC bonds, especially various chiral β-hydroxyamino acids. Threonine aldolase has a very wide range of potential applications, it can catalyze the synthesis of chiral pharmaceutical key intermediate β-hydroxy-α-amino acid. According to the stereospecificity of threonine aldolase to the substrate threonine α carbon, the enzyme can be divided into two types: L-type and D-type. L-threonine aldolase (L-TA) is a pyrrole aldehyde 5'-phosphate (PLP)-dependent aldolase that catalyzes various β-hydroxy-α-L derived from glycine and various aldehydes in one step - Optical synthesis of amino acids. For alkylaldehydes, L-TA always provides excellent stereoselectivity. However, for β-hydroxy- α -L-amino acids synthesized from aromatic aldehydes, L-TA is highly stereoselective (>99% diastereomeric excess, de) at Cα, while at Cβ Shows moderate to low stereoselectivity (about 10-45% de), especially for those aromatic groups with electron donating groups such as L-threo-DOPS.
申请号为2019109657806,发明名称为“苏氨酸醛缩酶、其编码基因和在屈昔多巴生物合成中的应用”的专利申请公开了一种从黑熊粪便样品中分离的L-苏氨酸醛缩酶基因,全长1032bp,编码由343个氨基酸组成的L-苏氨酸醛缩酶。该酶以3-/4-位羟基取代的苯甲醛和甘氨酸为底物合成屈昔多巴(L-threo-DOPS)的非对映选择性为30%。较低的非对映选择性大大阻碍了该酶在L-threo-DOPS合成中的应用。因此,非常有必要挖掘具有高选择性的苏氨酸醛缩酶用于屈昔多巴的合成。The patent application with the application number of 2019109657806 and the invention titled "Threonine aldolase, its encoding gene and its application in the biosynthesis of droxidopa" discloses an L-threonine isolated from black bear fecal samples Aldolase gene, full-length 1032bp, encodes L-threonine aldolase composed of 343 amino acids. The diastereoselectivity of the enzyme to synthesize droxidopa (L-threo-DOPS) with 3-/4-hydroxyl-substituted benzaldehyde and glycine as substrates was 30%. The low diastereoselectivity greatly hinders the application of this enzyme in the synthesis of L-threo-DOPS. Therefore, it is very necessary to explore threonine aldolase with high selectivity for the synthesis of droxidopa.
发明内容SUMMARY OF THE INVENTION
为了开发具有高选择性的苏氨酸醛缩酶,本发明从一级结构至高级结构多角度多层系比较了从黑熊粪便样品中分离的野生型L-苏氨酸醛缩酶(氨基酸序列如SEQ ID NO:1所示)与同源酶蛋白的异同,确定了影响野生型L-苏氨酸醛缩酶学性质的位点为第318位氨基酸——精氨酸。然后通过密码子替换将该位点的精氨酸(Arg)变为甲硫氨酸(Met),得到酶突变体,命名为L-TA R318M突变体。利用分子克隆技术获得了L-TA R318M突变体的编码基因(SEQ ID NO:4),通过构建突变体基因的GST融合表达载体并导入基因工程菌E.coliBL21中诱导表达,获得了L-TA R318M突变体酶蛋白。以L-TA R318M突变体为催化剂、3-/4-位羟基取代的苯甲醛为底物、甘氨酸为辅底物、5-磷酸吡哆醛为辅酶,在适当的条件和介质内进行酶催化反应,结果表明,该突变体合成屈昔多巴(L-threo-DOPS)的非对映选择性达到77.1%,是其野生型酶的2.5倍多,在屈昔多巴的工业生产中有巨大的应用价值。In order to develop a threonine aldolase with high selectivity, the present invention compared the wild-type L-threonine aldolase (amino acid sequence) isolated from black bear feces samples from the primary structure to the higher structure. As shown in SEQ ID NO: 1) and the homologous enzyme protein, it is determined that the site that affects the properties of wild-type L-threonine aldolase is the 318th amino acid - arginine. Then, the arginine (Arg) at this site was changed to methionine (Met) by codon substitution to obtain an enzyme mutant, named L-TA R318M mutant. The coding gene (SEQ ID NO: 4) of the L-TA R318M mutant was obtained by molecular cloning technology, and the L-TA was obtained by constructing the GST fusion expression vector of the mutant gene and introducing it into the genetically engineered bacteria E.coliBL21 to induce expression. R318M mutant enzyme protein. Using L-TA R318M mutant as catalyst, 3-/4-hydroxyl-substituted benzaldehyde as substrate, glycine as cosubstrate, and pyridoxal 5-phosphate as coenzyme, enzymatic catalysis was carried out under appropriate conditions and media. The results showed that the diastereoselectivity of the mutant to synthesize droxidopa (L-threo-DOPS) reached 77.1%, which was more than 2.5 times that of the wild-type enzyme. huge application value.
本发明提供一种L-苏氨酸醛缩酶突变体,其特征在于,其氨基酸序列如SEQ IDNO:3所示,是氨基酸序列为SEQ ID NO:1的L-苏氨酸醛缩酶的第318位氨基酸由Arg变为Met所得。The present invention provides an L-threonine aldolase mutant, characterized in that its amino acid sequence is shown in SEQ ID NO: 3, and it is the L-threonine aldolase whose amino acid sequence is SEQ ID NO: 1. Amino acid 318 was changed from Arg to Met.
编码所述L-苏氨酸醛缩酶突变体的基因也属于本发明的保护范围。The gene encoding the L-threonine aldolase mutant also belongs to the protection scope of the present invention.
在本发明的一些优选实施例中,所述基因的核苷酸序列如SEQ ID NO:4所示。In some preferred embodiments of the present invention, the nucleotide sequence of the gene is shown in SEQ ID NO:4.
包含所述基因的表达盒、载体或重组菌也属于本发明的保护范围。Expression cassettes, vectors or recombinant bacteria containing the genes also belong to the protection scope of the present invention.
本发明提供的载体,可以是克隆载体,包含L-TA R318M突变体基因和质粒复制所需的其它元件;也可以是表达载体,包含L-TA R318M突变体基因和能够使蛋白成功表达的其它元件。在本发明的一些实施例中,所述表达载体为插入了L-TA R318M突变体基因的pGEX-6p-2载体,pGEX-6p-2载体是已知的市售载体。The vector provided by the present invention can be a cloning vector, including the L-TA R318M mutant gene and other elements required for plasmid replication; it can also be an expression vector, including the L-TA R318M mutant gene and other elements capable of successfully expressing the protein element. In some embodiments of the present invention, the expression vector is the pGEX-6p-2 vector into which the L-TA R318M mutant gene is inserted, and the pGEX-6p-2 vector is a known commercial vector.
本发明提供的重组菌,可以是包含克隆载体的重组菌,例如E.coli DH5α,通过培养重组菌使L-TA R318M突变体基因得到复制;也可以是包含表达载体的重组菌,在适当的条件下培养重组菌并进行蛋白表达,例如:向重组菌培养液中加入适量的IPTG,于16℃诱导L-TA R318M突变体蛋白的表达。The recombinant bacteria provided by the present invention can be a recombinant bacteria containing a cloning vector, such as E.coli DH5α, by culturing the recombinant bacteria to replicate the L-TA R318M mutant gene; it can also be a recombinant bacteria containing an expression vector. Cultivate the recombinant bacteria under conditions and express the protein, for example, add an appropriate amount of IPTG to the culture medium of the recombinant bacteria to induce the expression of the L-TA R318M mutant protein at 16°C.
本发明还提供所述L-苏氨酸醛缩酶突变体的制备方法,包括如下步骤:合成所述L-苏氨酸醛缩酶突变体的编码基因,构建表达载体,转化蛋白表达宿主菌,诱导蛋白表达并纯化。The present invention also provides a method for preparing the L-threonine aldolase mutant, comprising the steps of: synthesizing the encoding gene of the L-threonine aldolase mutant, constructing an expression vector, and transforming a protein expression host bacteria , induce protein expression and purify.
在本发明的制备方法的优选实施例中,所述L-苏氨酸醛缩酶突变体的编码基因的核苷酸序列如SEQ ID NO:4所示。In a preferred embodiment of the preparation method of the present invention, the nucleotide sequence of the encoding gene of the L-threonine aldolase mutant is shown in SEQ ID NO:4.
在本发明的制备方法的一些实施例中,所述表达载体为pGEX-6p-2载体,所述蛋白表达宿主菌为E.coli BL21(DE3)。In some embodiments of the preparation method of the present invention, the expression vector is pGEX-6p-2 vector, and the protein expression host strain is E. coli BL21 (DE3).
本发明还提供一种催化剂,其有效成分包含所述L-苏氨酸醛缩酶突变体。所述催化剂可以单独使用,也可以与其它适合的催化剂同时使用,从而提高酶非对映选择性或者在同一反应体系中先后进行两种催化反应。The present invention also provides a catalyst, the active ingredient of which comprises the L-threonine aldolase mutant. The catalyst can be used alone or simultaneously with other suitable catalysts, so as to improve the diastereoselectivity of the enzyme or to carry out two catalytic reactions successively in the same reaction system.
所述L-苏氨酸醛缩酶突变体或所述催化剂在醛醇缩合反应中的应用也属于本发明的保护范围。The application of the L-threonine aldolase mutant or the catalyst in the aldol condensation reaction also belongs to the protection scope of the present invention.
在本发明的一些优选实施例中,使用所述L-苏氨酸醛缩酶突变体或所述催化剂,以3,4-二羟基苯甲醛为底物、甘氨酸为辅底物、5-磷酸吡哆醛为辅酶进行催化反应,合成屈昔多巴。In some preferred embodiments of the present invention, the L-threonine aldolase mutant or the catalyst is used, with 3,4-dihydroxybenzaldehyde as a substrate, glycine as a co-substrate, and 5-phosphate Pyridoxal is used as a coenzyme to catalyze the reaction to synthesize droxidopa.
在本发明的一些优选实施例中,所述催化反应在15-37℃、pH 6.0-11.0条件下进行。In some preferred embodiments of the present invention, the catalytic reaction is carried out at 15-37° C. and pH 6.0-11.0.
本发明的L-TA R318M突变体,在15-37℃、pH 6.0-11.0的反应条件下能够催化3,4-二羟基苯甲醛和甘氨酸的醛醇缩合可逆反应。The L-TA R318M mutant of the present invention can catalyze the reversible aldol condensation reaction of 3,4-dihydroxybenzaldehyde and glycine under the reaction conditions of 15-37° C. and pH 6.0-11.0.
附图说明Description of drawings
图1.L-苏氨酸醛缩酶(L-TA)催化合成屈昔多巴的示意图。Figure 1. Schematic diagram of L-threonine aldolase (L-TA)-catalyzed synthesis of droxidopa.
图2.PCR构建L-TA R318M突变体基因的琼脂糖凝胶电泳结果;其中,M为DNAMarker;R318M为PCR产物(L-TA R318M突变体基因)。Figure 2. The agarose gel electrophoresis results of the L-TA R318M mutant gene constructed by PCR; wherein, M is DNAMarker; R318M is the PCR product (L-TA R318M mutant gene).
图3.重组质粒pGEX-6p-2/L-TA R318M的双酶切鉴定结果;其中,M为DNA Marker;R318M为酶切产物。Figure 3. The identification results of double-enzyme digestion of recombinant plasmid pGEX-6p-2/L-TA R318M; wherein, M is DNA Marker; R318M is the digestion product.
图4.L-苏氨酸醛缩酶突变体R318M的SDS-PAGE电泳图;其中,M为蛋白质分子量标准(Marker);R318M为突变体蛋白,其分子量约为38.7KD。Figure 4. SDS-PAGE electropherogram of L-threonine aldolase mutant R318M; wherein, M is a protein molecular weight marker (Marker); R318M is a mutant protein with a molecular weight of about 38.7KD.
图5.L-苏氨酸醛缩酶突变体R318M催化产物的HPLC图谱;其中,最上面的谱图(标记为R318M)显示L-TA R318M突变体的催化产物,该催化反应是以3,4-二羟基苯甲醛为底物、甘氨酸为辅底物、5-磷酸吡哆醛为辅酶,在25℃、pH7.4的条件下进行;中间的谱图(标记为L-threo-DOPS)是L-threo-DOPS标准品;最下面的谱图(标记为L-DOPS)是L-threo-DOPS和L-erythro-DOPS外消旋体标准品。L-erythro-DOPS的保留时间为5.5min,L-threo-DOPS的保留时间为6.2min。Figure 5. HPLC profile of the catalytic product of the L-threonine aldolase mutant R318M; wherein the top spectrum (labeled as R318M) shows the catalytic product of the L-TA R318M mutant, the catalytic reaction is 3, 4-Dihydroxybenzaldehyde as substrate, glycine as cosubstrate, and pyridoxal 5-phosphate as coenzyme, at 25°C, pH 7.4; the middle spectrum (labeled as L-threo-DOPS) is the L-threo-DOPS standard; the bottom spectrum (labeled L-DOPS) is the L-threo-DOPS and L-erythro-DOPS racemate standard. The retention time of L-erythro-DOPS was 5.5 min, and the retention time of L-threo-DOPS was 6.2 min.
具体实施方式Detailed ways
下面结合具体实施例进一步描述本发明,需要声明的是,下述实施例仅作为解释和说明,不以任何方式限制本发明的范围。The present invention is further described below in conjunction with specific embodiments. It should be noted that the following embodiments are only used for explanation and illustration, and do not limit the scope of the present invention in any way.
主要试剂与耗材:Main reagents and consumables:
PrimeSTAR Max Premix(2×)(货号R045A)、BamH I限制性内切酶(货号1010S)、Xho I限制性内切酶(货号1094S)、T4 DNA Ligase(货号D2011A)和10×T4 Ligase buffer,均购买自宝生物科技有限公司(大连);PrimeSTAR Max Premix (2×) (Cat. No. R045A), BamH I Restriction Enzyme (Cat. No. 1010S), Xho I Restriction Enzyme (Cat. No. 1094S), T4 DNA Ligase (Cat. No. D2011A) and 10×T4 Ligase buffer, All purchased from Bao Biotechnology Co., Ltd. (Dalian);
pGEX-6p-2质粒为已知的大肠杆菌表达载体,别名pGEX6P2,pGEX 6P 2,载体大小为4985bp,Tac启动子,载体标签N-GST,载体抗性Ampicillin(氨苄青霉素),购自上海生工生物科技有限公司,本实验室亦有保存;The pGEX-6p-2 plasmid is a known E. coli expression vector, alias pGEX6P2, pGEX 6P 2, the vector size is 4985bp, Tac promoter, vector tag N-GST, vector resistance Ampicillin (ampicillin), purchased from Shanghai Sheng Engineering Biotechnology Co., Ltd., the laboratory is also preserved;
Trans5α感受态细胞(货号CD201-01)和E.coli BL21(DE3)感受态细胞(货号CD601),均购买自全式金生物技术有限公司;Trans5α competent cells (Cat. No. CD201-01) and E.coli BL21 (DE3) competent cells (Cat. No. CD601) were purchased from Quanshijin Biotechnology Co., Ltd.;
Glutathione Sepharose 4B,购买自GE Healthcare,货号10223836;Glutathione Sepharose 4B, purchased from GE Healthcare, Cat. No. 10223836;
PreScission Protease,购买自GenScript公司,货号Z02799-100;PreScission Protease, purchased from GenScript, Item No. Z02799-100;
Bradford蛋白浓度测定试剂盒,购买自Beyotime公司,货号P0006;Bradford Protein Concentration Assay Kit, purchased from Beyotime Company, Item No. P0006;
L-threo-DOPS标准品(CAS:23651-95-8,产品编号:D4235,分子式:C9H11NO5),L-DOPS(L-threo-DOPS和L-erythro-DOPS外消旋体)标准品(CAS:23651-95-8,产品编号:D9446),1-庚烷磺酸钠盐(CAS:22767-50-6,分子式:C7H15NaO3S),1,4-二恶烷(CAS:123-91-1,分子式:C4H8O2)均购买自百灵威科技公司;L-threo-DOPS standard (CAS: 23651-95-8, product number: D4235, molecular formula: C 9 H 11 NO 5 ), L-DOPS (L-threo-DOPS and L-erythro-DOPS racemates ) standard product (CAS: 23651-95-8, product number: D9446), 1-heptanesulfonic acid sodium salt (CAS: 22767-50-6, molecular formula: C7H15NaO3S), 1,4-dioxane (CAS: 123-91-1, molecular formula: C 4 H 8 O 2 ) were purchased from Bailingwei Technology Company;
甘氨酸(CAS:56-40-6,分子式:C2H5NO2,货号A502065),3,4-二羟基苯甲醛(CAS:139-85-5,线性分子式:(HO)2C6H3CHO,货号A601406),5-磷酸吡哆醛(英文名PLP,CAS:41468-25-1,分子式C8H12NO7P,货号A610455),均购买自生工生物工程(上海)股份有限公司。Glycine (CAS: 56-40-6, molecular formula: C 2 H 5 NO 2 , Cat. No. A502065), 3,4-dihydroxybenzaldehyde (CAS: 139-85-5, linear formula: (HO) 2 C 6 H 3 CHO, product number A601406), pyridoxal 5-phosphate (English name PLP, CAS: 41468-25-1, molecular formula C 8 H 12 NO 7 P, product number A610455), all purchased from Sangon Bioengineering (Shanghai) Co., Ltd. company.
LB培养基LB medium
每100ml LB培养基含有:1g胰蛋白胨、0.5g酵母提取物、1g氯化钠,pH 7.4。Each 100ml LB medium contains: 1g tryptone, 0.5g yeast extract, 1g sodium chloride, pH 7.4.
配制方法:在950ml ddH2O中溶解10g胰蛋白胨,5g酵母提取物,10g氯化钠,然后用NaOH调节pH为7.4,用ddH2O定容至1L。若配制固体培养基,则每升加入15g琼脂。121℃高压蒸汽灭菌20min。Preparation method: dissolve 10g tryptone, 5g yeast extract and 10g sodium chloride in 950ml ddH2O, then adjust the pH to 7.4 with NaOH, and make up to 1L with ddH2O. If preparing solid medium, add 15 g of agar per liter. Autoclave at 121°C for 20min.
PBS缓冲液PBS buffer
pH 7.4,10mM PBS的配制方法:称取8g NaCl、0.2g KCl、1.44g Na2HPO4和0.24gKH2PO4,溶于800mL蒸馏水中,用HCl调节溶液的pH值至7.4,最后加蒸馏水定容至1L即可。121℃高压蒸气灭菌至少20分钟,保存于室温或4℃冰箱中备用。The preparation method of pH 7.4, 10mM PBS: Weigh 8g NaCl, 0.2g KCl, 1.44g Na 2 HPO 4 and 0.24g KH 2 PO 4 , dissolve in 800 mL of distilled water, adjust the pH of the solution to 7.4 with HCl, and finally add distilled water Make up to 1L. Sterilize by autoclaving at 121°C for at least 20 minutes, and store at room temperature or in a refrigerator at 4°C for later use.
若未特别说明,以下实施例中使用的试剂均为本领域常规试剂,可商购获得或按照本领域常规方法配制而得,规格为实验室纯级即可。若未特别说明,以下实施例中使用的方法均为本领域常规方法,使用的实验条件均为本领域常规实验条件,可参考相关实验手册或厂商说明书。Unless otherwise specified, the reagents used in the following examples are all conventional reagents in the field, which can be obtained commercially or prepared according to conventional methods in the field, and the specifications are laboratory pure grade. Unless otherwise specified, the methods used in the following examples are all conventional methods in the art, and the experimental conditions used are all conventional experimental conditions in the art, and reference may be made to relevant experimental manuals or manufacturer's instructions.
实施例1.L-苏氨酸醛缩酶R318M突变体的制备Example 1. Preparation of L-threonine aldolase R318M mutant
一、L-苏氨酸醛缩酶突变体设计1. Design of L-threonine aldolase mutants
野生型L-苏氨酸醛缩酶基因(L-TA基因,SEQ ID NO:2)是本实验室从四川黑熊保护及孵育基地的健康黑熊的粪便样品中分离得到的,L-TA基因的开放阅读框全长1032bp,其编码的L-苏氨酸醛缩酶由343个氨基酸组成。该基因的分离和克隆过程记载在申请号为2019109657806,公布号为CN110592058A,发明名称为“苏氨酸醛缩酶、其编码基因和在屈昔多巴生物合成中的应用”的专利申请文本中,通过引用将该专利申请的全部内容包含在本文中。The wild-type L-threonine aldolase gene (L-TA gene, SEQ ID NO: 2) was isolated in our laboratory from the fecal samples of healthy black bears in the Sichuan black bear conservation and incubation base. The full length of the open reading frame is 1032bp, and the encoded L-threonine aldolase consists of 343 amino acids. The isolation and cloning process of the gene is recorded in the text of the patent application with the application number of 2019109657806, the publication number of CN110592058A, and the title of the invention is "Threonine aldolase, its encoding gene and its application in the biosynthesis of droxidopa" , the entire contents of this patent application are incorporated herein by reference.
所述野生型L-苏氨酸醛缩酶的氨基酸序列(343aa)为:The amino acid sequence (343aa) of the wild-type L-threonine aldolase is:
MYSFKNDYSEGAHPRILETLLRTNLEQCEGYGKDTYCEEAENLIKNKLNNESIEVHFISGGTQTNLIAISAFLRPHEGVISADTGHIFVNEAGSIEATGHKVISVDVVDGKLRRDDILSVLSKFTNEHVVKPKLVYISNSTEIGTIYKKSELEELSKVCRENNLLLFMDGARLGSALSCKENDLTLEDISKLTDAFYIGGTKNGALLGEALVICNKDLQEDFRYHLKQKGAMLAKGRLLGIQFIELFKDDLFFEIGKHENDMADILRDGISRLGYEFLVDSPSNQIFPVFNNDIIRELEKNYGFNIWEKVNEEKTAIRLVTSFATKEEPCLEFIKFLSGLTNK(SEQ ID NO:1)MYSFKNDYSEGAHPRILETLLRTNLEQCEGYGKDTYCEEAENLIKNKLNNESIEVHFISGGTQTNLIAISAFLRPHEGVISADTGHIFVNEAGSIEATGHKVISVDVVDGKLRRDDILSVLSKFTNEHVVKPKLVYISNSTEIGTIYKKSELEELSKVCRENNLLLFMDGARLGSALSCKENDLTLEDISKLTDAFYIGGTKNGALLGEALVICNKDLQEDFRYHLKQKGAMLAKGRLLGIQFIELFKDDLFFEIGKHENDMADILRDGISRLGYEFLVDSPSNQIFPVFNNDIIRELEKNYGFNIWEKVNEEKTAI R LVTSFATKEEPCLEFIKFLSGLTNK(SEQ ID NO:1)
所述野生型L-苏氨酸醛缩酶的编码基因的核苷酸序列(1032bp)为:The nucleotide sequence (1032bp) of the encoding gene of the wild-type L-threonine aldolase is:
ATGTATAGTTTTAAAAATGATTATAGTGAAGGGGCACATCCTAGAATTCTTGAAACGTTGCTGAGAACAAATTTAGAACAATGTGAAGGTTACGGAAAAGATACATACTGTGAGGAAGCTGAAAACTTAATAAAAAATAAACTAAATAATGAGTCTATTGAAGTCCATTTCATATCTGGAGGTACACAAACTAACTTAATAGCAATATCTGCATTTTTAAGGCCTCATGAGGGTGTTATATCAGCAGATACAGGGCATATATTTGTAAATGAAGCAGGTTCAATAGAAGCAACAGGACATAAGGTGATATCTGTTGATGTTGTGGATGGTAAACTAAGAAGAGACGATATACTATCAGTATTGAGTAAGTTTACTAATGAGCATGTTGTAAAACCAAAGCTTGTTTATATATCTAACTCTACTGAAATTGGAACTATATATAAAAAATCTGAATTAGAAGAGTTAAGCAAAGTTTGTAGAGAAAATAATTTATTACTATTTATGGATGGAGCAAGATTAGGATCTGCACTTTCTTGCAAAGAAAATGATTTGACATTAGAAGATATAAGTAAATTAACTGATGCTTTTTATATCGGGGGAACTAAGAATGGAGCTCTTTTAGGAGAAGCACTTGTTATATGTAATAAAGATTTACAGGAAGATTTTAGATATCACTTAAAACAAAAAGGAGCGATGCTTGCTAAGGGAAGGTTGCTTGGAATACAGTTTATAGAATTATTTAAAGATGATTTATTTTTTGAAATAGGAAAACATGAAAATGATATGGCTGATATATTAAGGGATGGAATAAGTAGGCTTGGATATGAATTTTTAGTAGACTCTCCATCTAATCAAATATTCCCAGTATTTAACAATGATATTATAAGAGAATTAGAGAAAAACTATGGATTTAATATATGGGAAAAAGTAAATGAAGAGAAAACTGCAATAAGATTAGTAACATCTTTTGCAACAAAAGAAGAACCTTGTCTAGAGTTTATAAAGTTTTTAAGTGGATTAACTAATAAATAA(SEQ ID NO:2) AGA TTAGTAACATCTTTTGCAACAAAAGAAGAACCTTGTCTAGAGTTTATAAAGTTTTTAAGTGGATTAACTAATAAATAA (SEQ ID NO: 2)
我们通过从一级结构至高级结构的多角度多层系比较野生型L-苏氨酸醛缩酶与同源酶蛋白的异同,确定了影响酶学性质的位点为野生型L-苏氨酸醛缩酶的第318位氨基酸,所述氨基酸为精氨酸(R),其对应的核苷酸序列为第952-954位密码子。将野生型L-TA基因序列的第952-954处密码子由AGA更改为ATG,从而将氨基酸序列的第318位由原来的精氨酸(R)替换成甲硫氨酸(M),得到酶突变体,命名为L-TA R318M突变体,其氨基酸序列如SEQID NO:3所示,其编码基因的核苷酸序列如SEQ ID NO:4所示。We compared the similarities and differences between the wild-type L-threonine aldolase and the homologous enzyme protein from the multi-angle multi-layer system from the primary structure to the higher structure, and determined that the site affecting the enzymatic properties was the wild-type L-threonine aldolase The 318th amino acid of acid aldolase is arginine (R), and its corresponding nucleotide sequence is the 952nd-954th codon. The codons 952-954 of the wild-type L-TA gene sequence were changed from AGA to ATG, and the 318th position of the amino acid sequence was replaced by the original arginine (R) with methionine (M), resulting in The enzyme mutant, named L-TA R318M mutant, its amino acid sequence is shown in SEQ ID NO:3, and the nucleotide sequence of its encoding gene is shown in SEQ ID NO:4.
二、L-TA R318M突变体基因的获得2. Acquisition of L-TA R318M mutant gene
L-TA R318M突变体基因可以通过全基因合成方法或分子克隆方法获得。本实验采用PCR法获得突变体基因。The L-TA R318M mutant gene can be obtained by a total gene synthesis method or a molecular cloning method. In this experiment, the mutant gene was obtained by PCR method.
1、引物设计1. Primer design
对获得的L-TA R318M突变体基因序列(SEQ ID NO:4)设计引物,在5’端引物中加入酶切位点BamH I(GGATCC),在3’端引物中加入酶切位点Xho I(CTCGAG)。引物的核苷酸序列如下:Design primers for the obtained L-TA R318M mutant gene sequence (SEQ ID NO: 4), add restriction site BamH I (GGATCC) to the 5' end primer, and add restriction enzyme site Xho to the 3' end primer I(CTCGAG). The nucleotide sequences of the primers are as follows:
上游引物为:L-TA-R318M-BamHI-FThe upstream primer is: L-TA-R318M-BamHI-F
5′-CGCGGATCCATGTATAGTTTTAAAAATGATTATA-3′(SEQ ID NO:5),5'-CGC GGATCC ATGTATAGTTTTAAAAATGATTATA-3' (SEQ ID NO: 5),
下游引物为:L-TA-R318M-XhoI-RThe downstream primer is: L-TA-R318M-XhoI-R
5′-CCGCTCGAGTTATTTATTAGTTAATCCACTTAAAAACTTTATAAACTCTAGACAAGGTTCTTCTTTTGTTGCAAAAGATGTTACTAACATTATTG-3′(SEQ ID NO:6)。5'-CCG CTCGAG TTATTTATTAGTTAATCCACTTAAAAACTTTATAAACTCTAGACAAGGTTCTTCTTTTGTTGCAAAAGATGTTACTAACATTATTG-3' (SEQ ID NO: 6).
委托生工生物工程(上海)股份有限公司合成上述引物。Sangon Bioengineering (Shanghai) Co., Ltd. was entrusted to synthesize the above primers.
2、L-TA R318M突变体基因克隆2. L-TA R318M mutant gene cloning
以含有野生型L-TA基因的质粒为模板,采用步骤1获得的上游引物和下游引物,按照下列PCR体系和程序扩增L-TA R318M突变体基因。所述含有野生型L-TA基因的质粒的制备方法记载在申请号为2019109657806,公布号为CN110592058A,发明名称为“苏氨酸醛缩酶、其编码基因和在屈昔多巴生物合成中的应用”的专利申请文本中,在其实施例3中记载为质粒pGEX-6p-2/L-TA Sz-1-2,通过引用将该专利申请的全文内容包含于此。Using the plasmid containing the wild-type L-TA gene as a template, and using the upstream and downstream primers obtained in step 1, the L-TA R318M mutant gene was amplified according to the following PCR system and procedure. The preparation method of the plasmid containing the wild-type L-TA gene is recorded in the application number 2019109657806, the publication number is CN110592058A, and the name of the invention is "threonine aldolase, its encoding gene and doxidopa biosynthesis. In the text of the patent application "application", it is described as plasmid pGEX-6p-2/L-TA Sz-1-2 in its Example 3, and the entire content of the patent application is incorporated herein by reference.
PCR体系:PrimeSTAR Max Premix(2×)25μL,质粒模板0.5μL,上游引物L-TA-R318M-BamHI-F(10μM)2μL,下游引物L-TA-R318M-XhoI-R(10μM)2μL,0.1%(g/ml)BSA是3μL,补ddH2O至PCR体系为50μL。PCR system: PrimeSTAR Max Premix (2×) 25 μL, plasmid template 0.5 μL, upstream primer L-TA-R318M-BamHI-F (10 μM) 2 μL, downstream primer L-TA-R318M-XhoI-R (10 μM) 2 μL, 0.1 % ( g /ml) BSA was 3 [mu]L, supplemented with ddH2O to make the PCR system 50 [mu]L.
PCR程序如下:The PCR procedure is as follows:
a.94℃预变性5min;a. Pre-denaturation at 94°C for 5min;
b.98℃变性10sec,48℃退火10sec,72℃延伸10sec;40个循环;b. Denaturation at 98°C for 10sec, annealing at 48°C for 10sec, extension at 72°C for 10sec; 40 cycles;
c.72℃延伸10min。c. Extend at 72°C for 10min.
使用1.2%琼脂糖凝胶电泳检测PCR扩增产物,结果如图2所示,得到大小约为1000bp的目的条带。在紫外灯下切取目的条带,使用Omega Gel Extraction Kit D2500,按照试剂盒说明书回收L-TA R318M突变体基因片段。The PCR amplification products were detected by 1.2% agarose gel electrophoresis, and the results were shown in Figure 2, and a target band with a size of about 1000 bp was obtained. The target band was cut under UV light, and the L-TA R318M mutant gene fragment was recovered using the Omega Gel Extraction Kit D2500 according to the kit instructions.
3、表达载体构建3. Construction of expression vector
(1)酶切和连接(1) Enzyme cleavage and ligation
利用BamH I和Xho I限制性内切酶分别对L-TA R318M突变体基因和pGEX-6p-2载体进行双酶切。酶切体系(基因):L-TA R318M突变体基因35μL,BamH I酶3μL,Xho I酶3μL,10×K buffer 6μL,补无菌双蒸水至体系为60μL。酶切体系(载体):pGEX-6p-2载体2μL,BamH I酶0.5μL,Xho I酶0.5μL,10×K buffer 1μL,补无菌双蒸水至体系为10μL。酶切条件:37℃酶切3h。The L-TA R318M mutant gene and pGEX-6p-2 vector were double digested with BamH I and Xho I restriction enzymes, respectively. Enzyme digestion system (gene): 35 μL of L-TA R318M mutant gene, 3 μL of BamH I enzyme, 3 μL of Xho I enzyme, 6 μL of 10×K buffer, supplemented with sterile double-distilled water to make the system 60 μL. Enzyme digestion system (vector): 2 μL of pGEX-6p-2 vector, 0.5 μL of BamH I enzyme, 0.5 μL of Xho I enzyme, 1 μL of 10×K buffer, supplemented with sterile double-distilled water to make the
然后使用T4 DNA连接酶连接酶切后的L-TA R318M突变体基因和pGEX-6p-2线性载体:Then use T4 DNA ligase to ligase the L-TA R318M mutant gene and pGEX-6p-2 linear vector:
16℃连接过夜,得到连接产物pGEX-6p-2/L-TA R318M。After ligation at 16°C overnight, the ligation product pGEX-6p-2/L-TA R318M was obtained.
(2)转化(2) Conversion
将Trans5α感受态细胞(全式金,CD201-01)放置于冰上,待细胞融化后加入10μLpGEX-6p-2/L-TA R318M,冰上放置30min。42℃热激90s,然后冰上放置2min。加入600μL无菌LB液体培养基,37℃,150rpm摇床培养45min。吸取200μL培养好的菌液,涂布于Amp+抗性(100μg/mL)LB平板培养基上,37℃倒置培养过夜。Trans5α competent cells (full gold, CD201-01) were placed on ice, 10 μL of pGEX-6p-2/L-TA R318M was added after the cells were thawed, and placed on ice for 30 min. Heat shock at 42°C for 90s, then place on ice for 2min. Add 600 μL of sterile LB liquid medium, and cultivate at 37° C. with a shaker at 150 rpm for 45 min. Pipette 200 μL of the cultured bacterial liquid, spread it on Amp + resistant (100 μg/mL) LB plate medium, and invert at 37°C overnight.
(3)阳性克隆筛选(3) Screening of positive clones
挑取LB平板上的单菌落,接种于Amp+抗性(100μg/mL)LB液体培养基中,37℃,220rpm摇床培养至OD600≈1.0,8000rpm离心5min收集菌体,用于质粒提取。使用OMEGAPlasmid Mini Kit I(货号:D6943)按照说明书提取质粒,并对质粒进行双酶切鉴定。Pick a single colony on the LB plate, inoculate it in Amp + resistant (100 μg/mL) LB liquid medium, culture at 37°C, shaker at 220 rpm to OD600≈1.0, and centrifuge at 8000 rpm for 5 min to collect bacteria for plasmid extraction. The plasmid was extracted using OMEGAPlasmid Mini Kit I (Catalog No.: D6943) according to the instructions, and the plasmid was identified by double restriction digestion.
酶切体系:Enzyme cleavage system:
酶切条件:37℃酶切3h。使用1.2%琼脂糖凝胶电泳检测酶切产物,选取双酶切鉴定正确的重组质粒送TAKARA(中国,大连)公司测序,测序结果正确的重组质粒作为L-TAR318M突变体的表达载体。Digestion conditions: 37°C for 3h. Use 1.2% agarose gel electrophoresis to detect the digested product, select the correct recombinant plasmid identified by double enzyme digestion and send it to TAKARA (Dalian, China) for sequencing. The correct recombinant plasmid is used as the expression vector of the L-TAR318M mutant.
4.酶蛋白的GST融合异源表达4. GST fusion heterologous expression of enzyme protein
(1)质粒转化E.coli BL21(DE3)细胞(1) E.coli BL21(DE3) cells were transformed with plasmids
从-80℃中取出E.coli BL21(DE3)感受态细胞,冰上放置。待细胞融化后,加入10μL测序结果正确的表达载体pGEX-6p-2/L-TA R318M,冰上放置30min。42℃热激90s,然后冰上放置2min。加入600μL无菌LB液体培养基,37℃,150rpm摇床培养45min。吸取200μL培养好的菌液,涂布于Amp+抗性(100μg/mL)LB平板培养基上,37℃倒置培养过夜。挑取LB平板上的单菌落,按照步骤2中的PCR体系和程序进行菌落PCR鉴定,将鉴定结果正确的菌落作为蛋白表达菌株。Remove E. coli BL21(DE3) competent cells from -80°C and place on ice. After the cells were thawed, 10 μL of the expression vector pGEX-6p-2/L-TA R318M with correct sequencing results was added and placed on ice for 30 min. Heat shock at 42°C for 90s, then place on ice for 2min. Add 600 μL of sterile LB liquid medium, and cultivate at 37° C. with a shaker at 150 rpm for 45 min. Pipette 200 μL of the cultured bacterial liquid, spread it on Amp + resistant (100 μg/mL) LB plate medium, and invert at 37°C overnight. Pick a single colony on the LB plate, carry out colony PCR identification according to the PCR system and procedure in step 2, and use the colony with the correct identification result as the protein expression strain.
(2)蛋白表达与纯化(2) Protein expression and purification
a.将蛋白表达菌株接种入无菌LB液体培养基中,氨苄青霉素终浓度为50μg/mL,37℃,180rpm培养。a. Inoculate the protein expression strain into sterile LB liquid medium, the final concentration of ampicillin is 50 μg/mL, and cultivate at 37° C. and 180 rpm.
b.待OD600≈0.8时,加入终浓度为0.2mM的IPTG,16℃,180rpm诱导培养过夜(12h)。8000rpm离心5min收集菌体。b. When OD600≈0.8, add IPTG with a final concentration of 0.2 mM, induce and culture at 16° C. and 180 rpm overnight (12 h). The cells were collected by centrifugation at 8000 rpm for 5 min.
c.按1L培养体系加30mL裂解缓冲液(pH 7.4,10mM PBS)的比例重悬菌体,4℃超声破菌至澄清。破碎的菌液均分至4℃预冷的50mL无菌离心管中,4℃,12000rpm离心20min,待离心结束,用精密移液枪将上清转移到4℃预冷的50mL无菌离心管中。c. Add 30 mL of lysis buffer (pH 7.4, 10 mM PBS) to the 1 L culture system to resuspend the bacteria, and sterilize the bacteria by sonication at 4° C. until clear. The broken bacterial liquid was evenly divided into 50mL sterile centrifuge tubes pre-cooled at 4°C, and centrifuged at 12000rpm for 20min at 4°C. After the centrifugation was completed, the supernatant was transferred to a 50mL sterile centrifuge tube pre-cooled at 4°C with a precision pipette. middle.
d.取Glutathione Sepharose 4B填料(GE Healthcare)装于层析柱(GEHealthcare)中,填料使用的比例为每升培养体系使用5mL填料。用4℃预冷的pH7.4,10mM无菌PBS冲洗3个柱体积,去除无水乙醇。将步骤c得到的上清与Glutathione Sepharose 4B结合,4℃结合2h。轻轻垂直颠倒混悬。d. Pack Glutathione Sepharose 4B filler (GE Healthcare) into a chromatography column (GE Healthcare), and the ratio of filler used is 5mL filler per liter of culture system. Absolute ethanol was removed by washing with 3 column volumes of 10 mM sterile PBS, pH 7.4, pre-chilled at 4°C. The supernatant obtained in step c was combined with Glutathione Sepharose 4B for 2 hours at 4°C. Gently invert the suspension vertically.
e.结合完毕后,500rpm离心5min沉淀填料。填料用4℃预冷的pH7.4,10mM无菌PBS冲洗3-5个柱体积,去除杂蛋白。e. After the binding is completed, centrifuge at 500 rpm for 5 min to precipitate the filler. The filler was washed with 4°C pre-cooled pH7.4, 10mM sterile PBS for 3-5 column volumes to remove impurity proteins.
f.加入4℃预冷的酶切缓冲液(pH 7.4,10mM PBS),加入PreScission Protease酶(GenScript,Z02799-100),4℃酶切过夜。f. Add 4°C pre-cooled digestion buffer (pH 7.4, 10 mM PBS), add PreScission Protease enzyme (GenScript, Z02799-100), and digest overnight at 4°C.
g.酶切完毕后,将上清从层析柱中放出,即得L-TA R318M酶液。g. After the enzyme digestion is completed, the supernatant is released from the chromatography column to obtain L-TA R318M enzyme solution.
h.将L-TA R318M酶液进行SDS-PAGE检测,鉴定其分子量大小。使用Bradford蛋白浓度测定试剂盒(Beyotime,P0006)按照试剂盒说明书测定L-TA R318M酶液的浓度。h. The L-TA R318M enzyme solution was detected by SDS-PAGE to identify its molecular weight. The concentration of L-TA R318M enzyme solution was measured using Bradford protein concentration assay kit (Beyotime, P0006) according to the kit instructions.
结果如图4所示,SDS-PAGE检测结果显示L-TA R318M突变体可溶性表达成功,蛋白分子量约为38.7KD,酶蛋白纯度很高,呈单一条带。经测定,L-TA R318M酶液的浓度为2mg/mL。The results are shown in Figure 4. The results of SDS-PAGE showed that the soluble expression of the L-TA R318M mutant was successful, the protein molecular weight was about 38.7KD, and the enzyme protein was very pure, showing a single band. The concentration of L-TA R318M enzyme solution was determined to be 2 mg/mL.
实施例2.利用L-TA R318M突变体合成屈昔多巴并检测de值Example 2. Synthesis of droxidopa using L-TA R318M mutant and detection of de value
1、屈昔多巴的合成1. Synthesis of Droxidopa
底物溶液采用pH7.4,10mM PBS配制,含有1M甘氨酸,60mM 3,4-二羟基苯甲醛和50μM 5-磷酸吡哆醛。向每毫升底物溶液中加入实施例1中制备的L-TA R318M酶20U,混匀后置于25℃反应2h,然后超滤(10kDa,4000×g,30分钟)获得样品。The substrate solution was prepared in 10 mM PBS, pH 7.4, containing 1 M glycine, 60 mM 3,4-dihydroxybenzaldehyde and 50 [mu]M pyridoxal 5-phosphate. The L-TA R318M enzyme 20U prepared in Example 1 was added to each milliliter of the substrate solution, mixed well, placed at 25°C for reaction for 2h, and then ultrafiltered (10kDa, 4000×g, 30min) to obtain the sample.
2、屈昔多巴的检测与de值计算2. Detection of droxidopa and calculation of de value
将步骤1超滤后得到的样品稀释10倍以达到更好的HPLC分离效果。利用HPLC检测样品中屈昔多巴(L-threo-DOPS)和它的非对映异构体(L-erythro-DOPS)的量。HPLC仪器型号:安捷伦1260。参数设置:色谱柱:COSMOSIL 5C18-MS 4.6×150mm;波长280nm,柱温30℃;流动相:90%0.1%(w/v,g/mL)1-庚烷磺酸钠盐/0.1%(w/v,g/mL)1,4-二恶烷(溶剂为蒸馏水),10%甲醇;进样量10μL,流速1mL/min。按照相同的HPLC参数分别检测L-threo-DOPS标准品(0.1mg/mL,pH7.4,10mM PBS),以及L-threo-DOPS和L-erythro-DOPS的外消旋体标准品(0.01mg/mL,pH7.4,10mM PBS)。The sample obtained after ultrafiltration in step 1 was diluted 10 times to achieve better HPLC separation effect. The amount of droxidopa (L-threo-DOPS) and its diastereomer (L-erythro-DOPS) in the samples was determined by HPLC. HPLC instrument model: Agilent 1260. Parameter setting: Column: COSMOSIL 5C18-MS 4.6×150mm; wavelength 280nm,
根据峰面积确定样品中L-threo-DOPS与L-erythro-DOPS的量。然后基于以下方程式确定de值(diastereoisomeric excess,非对映体过量百分率):The amount of L-threo-DOPS and L-erythro-DOPS in the sample was determined based on the peak area. The de value (diastereoisomeric excess, percent diastereoisomeric excess) was then determined based on the following equation:
[(L-threo-DOPS的量-L-erythro-DOPS的量)/(L-threo-DOPS的量+L-erythro-DOPS的量)]×100%。[(Amount of L-threo-DOPS−Amount of L-erythro-DOPS)/(Amount of L-threo-DOPS+Amount of L-erythro-DOPS)]×100%.
HPLC结果如图5所示,其中,最上面的谱图(标记为R318M)是L-TA R318M突变体的催化产物;中间的谱图(标记为L-threo-DOPS)是L-threo-DOPS标准品;最下面的谱图(标记为L-DOPS)是L-threo-DOPS和L-erythro-DOPS外消旋体的标准品。L-erythro-DOPS的保留时间为5.5min,L-threo-DOPS的保留时间为6.2min。经计算,L-TA R318M突变体在催化3,4-二羟基苯甲醛和甘氨酸合成屈昔多巴(L-threo-DOPS)的反应中具有77.1%的非对映选择性(de值)。The HPLC results are shown in Figure 5, where the top spectrum (labeled as R318M) is the catalytic product of the L-TA R318M mutant; the middle spectrum (labeled as L-threo-DOPS) is L-threo-DOPS Standard; the bottom spectrum (labeled L-DOPS) is the standard for the L-threo-DOPS and L-erythro-DOPS racemates. The retention time of L-erythro-DOPS was 5.5 min, and the retention time of L-threo-DOPS was 6.2 min. The L-TA R318M mutant was calculated to have a diastereoselectivity (de value) of 77.1% in catalyzing the synthesis of droxidopa (L-threo-DOPS) from 3,4-dihydroxybenzaldehyde and glycine.
序列表 sequence listing
<110> 重庆大学<110> Chongqing University
<120> L-苏氨酸醛缩酶突变体R318M及其应用<120> L-threonine aldolase mutant R318M and its application
<130> P2030311-CQD-CQ-XDW<130> P2030311-CQD-CQ-XDW
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Met Tyr Ser Phe Lys Asn Asp Tyr Ser Glu Gly Ala His Pro Arg IleMet Tyr Ser Phe Lys Asn Asp Tyr Ser Glu Gly Ala His Pro Arg Ile
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Lys Asp Thr Tyr Cys Glu Glu Ala Glu Asn Leu Ile Lys Asn Lys LeuLys Asp Thr Tyr Cys Glu Glu Ala Glu Asn Leu Ile Lys Asn Lys Leu
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Asn Asn Glu Ser Ile Glu Val His Phe Ile Ser Gly Gly Thr Gln ThrAsn Asn Glu Ser Ile Glu Val His Phe Ile Ser Gly Gly Thr Gln Thr
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Asn Leu Ile Ala Ile Ser Ala Phe Leu Arg Pro His Glu Gly Val IleAsn Leu Ile Ala Ile Ser Ala Phe Leu Arg Pro His Glu Gly Val Ile
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Ser Ala Asp Thr Gly His Ile Phe Val Asn Glu Ala Gly Ser Ile GluSer Ala Asp Thr Gly His Ile Phe Val Asn Glu Ala Gly Ser Ile Glu
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Ala Thr Gly His Lys Val Ile Ser Val Asp Val Val Asp Gly Lys LeuAla Thr Gly His Lys Val Ile Ser Val Asp Val Val Asp Gly Lys Leu
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Arg Arg Asp Asp Ile Leu Ser Val Leu Ser Lys Phe Thr Asn Glu HisArg Arg Asp Asp Ile Leu Ser Val Leu Ser Lys Phe Thr Asn Glu His
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Val Val Lys Pro Lys Leu Val Tyr Ile Ser Asn Ser Thr Glu Ile GlyVal Val Lys Pro Lys Leu Val Tyr Ile Ser Asn Ser Thr Glu Ile Gly
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Thr Ile Tyr Lys Lys Ser Glu Leu Glu Glu Leu Ser Lys Val Cys ArgThr Ile Tyr Lys Lys Ser Glu Leu Glu Glu Leu Ser Lys Val Cys Arg
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Glu Asn Asn Leu Leu Leu Phe Met Asp Gly Ala Arg Leu Gly Ser AlaGlu Asn Asn Leu Leu Leu Phe Met Asp Gly Ala Arg Leu Gly Ser Ala
165 170 175 165 170 175
Leu Ser Cys Lys Glu Asn Asp Leu Thr Leu Glu Asp Ile Ser Lys LeuLeu Ser Cys Lys Glu Asn Asp Leu Thr Leu Glu Asp Ile Ser Lys Leu
180 185 190 180 185 190
Thr Asp Ala Phe Tyr Ile Gly Gly Thr Lys Asn Gly Ala Leu Leu GlyThr Asp Ala Phe Tyr Ile Gly Gly Thr Lys Asn Gly Ala Leu Leu Gly
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Glu Ala Leu Val Ile Cys Asn Lys Asp Leu Gln Glu Asp Phe Arg TyrGlu Ala Leu Val Ile Cys Asn Lys Asp Leu Gln Glu Asp Phe Arg Tyr
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His Leu Lys Gln Lys Gly Ala Met Leu Ala Lys Gly Arg Leu Leu GlyHis Leu Lys Gln Lys Gly Ala Met Leu Ala Lys Gly Arg Leu Leu Gly
225 230 235 240225 230 235 240
Ile Gln Phe Ile Glu Leu Phe Lys Asp Asp Leu Phe Phe Glu Ile GlyIle Gln Phe Ile Glu Leu Phe Lys Asp Asp Leu Phe Phe Glu Ile Gly
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Lys His Glu Asn Asp Met Ala Asp Ile Leu Arg Asp Gly Ile Ser ArgLys His Glu Asn Asp Met Ala Asp Ile Leu Arg Asp Gly Ile Ser Arg
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Leu Gly Tyr Glu Phe Leu Val Asp Ser Pro Ser Asn Gln Ile Phe ProLeu Gly Tyr Glu Phe Leu Val Asp Ser Pro Ser Asn Gln Ile Phe Pro
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Val Phe Asn Asn Asp Ile Ile Arg Glu Leu Glu Lys Asn Tyr Gly PheVal Phe Asn Asn Asp Ile Ile Arg Glu Leu Glu Lys Asn Tyr Gly Phe
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Asn Ile Trp Glu Lys Val Asn Glu Glu Lys Thr Ala Ile Arg Leu ValAsn Ile Trp Glu Lys Val Asn Glu Glu Lys Thr Ala Ile Arg Leu Val
305 310 315 320305 310 315 320
Thr Ser Phe Ala Thr Lys Glu Glu Pro Cys Leu Glu Phe Ile Lys PheThr Ser Phe Ala Thr Lys Glu Glu Pro Cys Leu Glu Phe Ile Lys Phe
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Leu Ser Gly Leu Thr Asn LysLeu Ser Gly Leu Thr Asn Lys
340 340
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atgtatagtt ttaaaaatga ttatagtgaa ggggcacatc ctagaattct tgaaacgttg 60atgtatagtt ttaaaaatga ttatagtgaa ggggcacatc ctagaattct tgaaacgttg 60
ctgagaacaa atttagaaca atgtgaaggt tacggaaaag atacatactg tgaggaagct 120ctgagaacaa atttagaaca atgtgaaggt tacggaaaag atacatactg tgaggaagct 120
gaaaacttaa taaaaaataa actaaataat gagtctattg aagtccattt catatctgga 180gaaaacttaa taaaaaataa actaaataat gagtctattg aagtccattt catatctgga 180
ggtacacaaa ctaacttaat agcaatatct gcatttttaa ggcctcatga gggtgttata 240ggtacacaaa ctaacttaat agcaatatct gcatttttaa ggcctcatga gggtgttata 240
tcagcagata cagggcatat atttgtaaat gaagcaggtt caatagaagc aacaggacat 300tcagcagata cagggcatat atttgtaaat gaagcaggtt caatagaagc aacaggacat 300
aaggtgatat ctgttgatgt tgtggatggt aaactaagaa gagacgatat actatcagta 360aaggtgatat ctgttgatgt tgtggatggt aaactaagaa gagacgatat actatcagta 360
ttgagtaagt ttactaatga gcatgttgta aaaccaaagc ttgtttatat atctaactct 420ttgagtaagt ttactaatga gcatgttgta aaaccaaagc ttgtttatat atctaactct 420
actgaaattg gaactatata taaaaaatct gaattagaag agttaagcaa agtttgtaga 480actgaaattg gaactatata taaaaaatct gaattagaag agttaagcaa agtttgtaga 480
gaaaataatt tattactatt tatggatgga gcaagattag gatctgcact ttcttgcaaa 540gaaaataatt tattactatt tatggatgga gcaagattag gatctgcact ttcttgcaaa 540
gaaaatgatt tgacattaga agatataagt aaattaactg atgcttttta tatcggggga 600gaaaatgatt tgacattaga agatataagt aaattaactg atgcttttta tatcggggga 600
actaagaatg gagctctttt aggagaagca cttgttatat gtaataaaga tttacaggaa 660actaagaatg gagctctttt aggagaagca cttgttatat gtaataaaga tttacaggaa 660
gattttagat atcacttaaa acaaaaagga gcgatgcttg ctaagggaag gttgcttgga 720gattttagat atcacttaaa acaaaaagga gcgatgcttg ctaagggaag gttgcttgga 720
atacagttta tagaattatt taaagatgat ttattttttg aaataggaaa acatgaaaat 780atacagttta tagaattatt taaagatgat ttattttttg aaataggaaa acatgaaaat 780
gatatggctg atatattaag ggatggaata agtaggcttg gatatgaatt tttagtagac 840gatatggctg atatattaag ggatggaata agtaggcttg gatatgaatt tttagtagac 840
tctccatcta atcaaatatt cccagtattt aacaatgata ttataagaga attagagaaa 900tctccatcta atcaaatatt cccagtattt aacaatgata ttataagaga attagagaaa 900
aactatggat ttaatatatg ggaaaaagta aatgaagaga aaactgcaat aagattagta 960aactatggat ttaatatatg ggaaaaagta aatgaagaga aaactgcaat aagattagta 960
acatcttttg caacaaaaga agaaccttgt ctagagttta taaagttttt aagtggatta 1020acatcttttg caacaaaaga agaaccttgt ctagagttta taaagtttttt aagtggatta 1020
actaataaat aa 1032actaataaat aa 1032
<210> 3<210> 3
<211> 343<211> 343
<212> PRT<212> PRT
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
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Met Tyr Ser Phe Lys Asn Asp Tyr Ser Glu Gly Ala His Pro Arg IleMet Tyr Ser Phe Lys Asn Asp Tyr Ser Glu Gly Ala His Pro Arg Ile
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Lys Asp Thr Tyr Cys Glu Glu Ala Glu Asn Leu Ile Lys Asn Lys LeuLys Asp Thr Tyr Cys Glu Glu Ala Glu Asn Leu Ile Lys Asn Lys Leu
35 40 45 35 40 45
Asn Asn Glu Ser Ile Glu Val His Phe Ile Ser Gly Gly Thr Gln ThrAsn Asn Glu Ser Ile Glu Val His Phe Ile Ser Gly Gly Thr Gln Thr
50 55 60 50 55 60
Asn Leu Ile Ala Ile Ser Ala Phe Leu Arg Pro His Glu Gly Val IleAsn Leu Ile Ala Ile Ser Ala Phe Leu Arg Pro His Glu Gly Val Ile
65 70 75 8065 70 75 80
Ser Ala Asp Thr Gly His Ile Phe Val Asn Glu Ala Gly Ser Ile GluSer Ala Asp Thr Gly His Ile Phe Val Asn Glu Ala Gly Ser Ile Glu
85 90 95 85 90 95
Ala Thr Gly His Lys Val Ile Ser Val Asp Val Val Asp Gly Lys LeuAla Thr Gly His Lys Val Ile Ser Val Asp Val Val Asp Gly Lys Leu
100 105 110 100 105 110
Arg Arg Asp Asp Ile Leu Ser Val Leu Ser Lys Phe Thr Asn Glu HisArg Arg Asp Asp Ile Leu Ser Val Leu Ser Lys Phe Thr Asn Glu His
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Val Val Lys Pro Lys Leu Val Tyr Ile Ser Asn Ser Thr Glu Ile GlyVal Val Lys Pro Lys Leu Val Tyr Ile Ser Asn Ser Thr Glu Ile Gly
130 135 140 130 135 140
Thr Ile Tyr Lys Lys Ser Glu Leu Glu Glu Leu Ser Lys Val Cys ArgThr Ile Tyr Lys Lys Ser Glu Leu Glu Glu Leu Ser Lys Val Cys Arg
145 150 155 160145 150 155 160
Glu Asn Asn Leu Leu Leu Phe Met Asp Gly Ala Arg Leu Gly Ser AlaGlu Asn Asn Leu Leu Leu Phe Met Asp Gly Ala Arg Leu Gly Ser Ala
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Leu Ser Cys Lys Glu Asn Asp Leu Thr Leu Glu Asp Ile Ser Lys LeuLeu Ser Cys Lys Glu Asn Asp Leu Thr Leu Glu Asp Ile Ser Lys Leu
180 185 190 180 185 190
Thr Asp Ala Phe Tyr Ile Gly Gly Thr Lys Asn Gly Ala Leu Leu GlyThr Asp Ala Phe Tyr Ile Gly Gly Thr Lys Asn Gly Ala Leu Leu Gly
195 200 205 195 200 205
Glu Ala Leu Val Ile Cys Asn Lys Asp Leu Gln Glu Asp Phe Arg TyrGlu Ala Leu Val Ile Cys Asn Lys Asp Leu Gln Glu Asp Phe Arg Tyr
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His Leu Lys Gln Lys Gly Ala Met Leu Ala Lys Gly Arg Leu Leu GlyHis Leu Lys Gln Lys Gly Ala Met Leu Ala Lys Gly Arg Leu Leu Gly
225 230 235 240225 230 235 240
Ile Gln Phe Ile Glu Leu Phe Lys Asp Asp Leu Phe Phe Glu Ile GlyIle Gln Phe Ile Glu Leu Phe Lys Asp Asp Leu Phe Phe Glu Ile Gly
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Lys His Glu Asn Asp Met Ala Asp Ile Leu Arg Asp Gly Ile Ser ArgLys His Glu Asn Asp Met Ala Asp Ile Leu Arg Asp Gly Ile Ser Arg
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Leu Gly Tyr Glu Phe Leu Val Asp Ser Pro Ser Asn Gln Ile Phe ProLeu Gly Tyr Glu Phe Leu Val Asp Ser Pro Ser Asn Gln Ile Phe Pro
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Val Phe Asn Asn Asp Ile Ile Arg Glu Leu Glu Lys Asn Tyr Gly PheVal Phe Asn Asn Asp Ile Ile Arg Glu Leu Glu Lys Asn Tyr Gly Phe
290 295 300 290 295 300
Asn Ile Trp Glu Lys Val Asn Glu Glu Lys Thr Ala Ile Met Leu ValAsn Ile Trp Glu Lys Val Asn Glu Glu Lys Thr Ala Ile Met Leu Val
305 310 315 320305 310 315 320
Thr Ser Phe Ala Thr Lys Glu Glu Pro Cys Leu Glu Phe Ile Lys PheThr Ser Phe Ala Thr Lys Glu Glu Pro Cys Leu Glu Phe Ile Lys Phe
325 330 335 325 330 335
Leu Ser Gly Leu Thr Asn LysLeu Ser Gly Leu Thr Asn Lys
340 340
<210> 4<210> 4
<211> 1032<211> 1032
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 4<400> 4
atgtatagtt ttaaaaatga ttatagtgaa ggggcacatc ctagaattct tgaaacgttg 60atgtatagtt ttaaaaatga ttatagtgaa ggggcacatc ctagaattct tgaaacgttg 60
ctgagaacaa atttagaaca atgtgaaggt tacggaaaag atacatactg tgaggaagct 120ctgagaacaa atttagaaca atgtgaaggt tacggaaaag atacatactg tgaggaagct 120
gaaaacttaa taaaaaataa actaaataat gagtctattg aagtccattt catatctgga 180gaaaacttaa taaaaaataa actaaataat gagtctattg aagtccattt catatctgga 180
ggtacacaaa ctaacttaat agcaatatct gcatttttaa ggcctcatga gggtgttata 240ggtacacaaa ctaacttaat agcaatatct gcatttttaa ggcctcatga gggtgttata 240
tcagcagata cagggcatat atttgtaaat gaagcaggtt caatagaagc aacaggacat 300tcagcagata cagggcatat atttgtaaat gaagcaggtt caatagaagc aacaggacat 300
aaggtgatat ctgttgatgt tgtggatggt aaactaagaa gagacgatat actatcagta 360aaggtgatat ctgttgatgt tgtggatggt aaactaagaa gagacgatat actatcagta 360
ttgagtaagt ttactaatga gcatgttgta aaaccaaagc ttgtttatat atctaactct 420ttgagtaagt ttactaatga gcatgttgta aaaccaaagc ttgtttatat atctaactct 420
actgaaattg gaactatata taaaaaatct gaattagaag agttaagcaa agtttgtaga 480actgaaattg gaactatata taaaaaatct gaattagaag agttaagcaa agtttgtaga 480
gaaaataatt tattactatt tatggatgga gcaagattag gatctgcact ttcttgcaaa 540gaaaataatt tattactatt tatggatgga gcaagattag gatctgcact ttcttgcaaa 540
gaaaatgatt tgacattaga agatataagt aaattaactg atgcttttta tatcggggga 600gaaaatgatt tgacattaga agatataagt aaattaactg atgcttttta tatcggggga 600
actaagaatg gagctctttt aggagaagca cttgttatat gtaataaaga tttacaggaa 660actaagaatg gagctctttt aggagaagca cttgttatat gtaataaaga tttacaggaa 660
gattttagat atcacttaaa acaaaaagga gcgatgcttg ctaagggaag gttgcttgga 720gattttagat atcacttaaa acaaaaagga gcgatgcttg ctaagggaag gttgcttgga 720
atacagttta tagaattatt taaagatgat ttattttttg aaataggaaa acatgaaaat 780atacagttta tagaattatt taaagatgat ttattttttg aaataggaaa acatgaaaat 780
gatatggctg atatattaag ggatggaata agtaggcttg gatatgaatt tttagtagac 840gatatggctg atatattaag ggatggaata agtaggcttg gatatgaatt tttagtagac 840
tctccatcta atcaaatatt cccagtattt aacaatgata ttataagaga attagagaaa 900tctccatcta atcaaatatt cccagtattt aacaatgata ttataagaga attagagaaa 900
aactatggat ttaatatatg ggaaaaagta aatgaagaga aaactgcaat aatgttagta 960aactatggat ttaatatatg ggaaaaagta aatgaagaga aaactgcaat aatgttagta 960
acatcttttg caacaaaaga agaaccttgt ctagagttta taaagttttt aagtggatta 1020acatcttttg caacaaaaga agaaccttgt ctagagttta taaagtttttt aagtggatta 1020
actaataaat aa 1032actaataaat aa 1032
<210> 5<210> 5
<211> 34<211> 34
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 5<400> 5
cgcggatcca tgtatagttt taaaaatgat tata 34cgcggatcca tgtatagttt taaaaatgat tata 34
<210> 6<210> 6
<211> 95<211> 95
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 6<400> 6
ccgctcgagt tatttattag ttaatccact taaaaacttt ataaactcta gacaaggttc 60ccgctcgagt tatttattag ttaatccact taaaaacttt ataaactcta gacaaggttc 60
ttcttttgtt gcaaaagatg ttactaacat tattg 95ttcttttgtt gcaaaagatg ttactaacat tattg 95
Claims (10)
Priority Applications (1)
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