CN111349550B - Device and method for fermenting aerobic strains at high flux and application of device and method - Google Patents
Device and method for fermenting aerobic strains at high flux and application of device and method Download PDFInfo
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Abstract
Description
技术领域technical field
本发明涉及菌株育种技术领域,具体涉及一种高通量发酵好氧菌的装置和方法以及他们的应用。The invention relates to the technical field of strain breeding, in particular to a device and method for high-throughput fermentation of aerobic bacteria and their application.
背景技术Background technique
高通量筛选技术是指在DNA层面或细胞层面,以深孔板为培养或反应介质,以自动化设备取代人力处理数以千万的样品,并灵敏快速获取数据的方法,它具有微量、快速、灵敏等特点。目前在高通量平行细胞培养仪器研究主要侧重两个方面:1)、通过尽量减少反应器的体积提高培养的通量,即采用微型(毫升甚至微升)生物反应器;2)、基于细胞培养过程的丰富经验,在高通量培养过程中,尽可能的模拟工业级反应器的条件,即实现微反应器的过程控制与参数控制。High-throughput screening technology refers to the method of using deep-well plates as culture or reaction medium at the DNA level or cell level, replacing manpower with automated equipment to process tens of millions of samples, and obtaining data sensitively and quickly. Sensitive and other characteristics. At present, the research on high-throughput parallel cell culture instruments mainly focuses on two aspects: 1), improving the throughput of culture by minimizing the volume of the reactor, that is, using miniature (milliliter or even microliter) bioreactors; 2), based on cell Rich experience in the cultivation process, in the high-throughput cultivation process, simulate the conditions of industrial-grade reactors as much as possible, that is, realize the process control and parameter control of micro-reactors.
在传统菌株选育过程中,通过摇瓶初筛、复筛从中选择出发酵效果较好的菌株再进行小型发酵罐试验。对于好氧菌种的筛选,摇瓶培养易于实施,并且氧传递速率高,能够提供好氧菌菌种生长代谢所需的氧气,广泛用于发酵的早期研究。In the traditional strain breeding process, strains with better fermentation effects were selected through shake flask primary screening and re-screening, and then small-scale fermenter tests were carried out. For the screening of aerobic strains, shake flask culture is easy to implement, and has a high oxygen transfer rate, which can provide the oxygen required for the growth and metabolism of aerobic strains, and is widely used in the early research of fermentation.
随着生物技术的发展,菌种的构建、选育以及发酵工程规模放大的相关研究,需要达到高通量以提高效率,摇瓶由于通量低,蒸发率大,且耗费大量人力、物力,耗时时间长,不能满足于现在的工作需求,目前市场上流通的高通量筛选孔板虽然能够达到高通量以提高效率的目的,但是,由于好氧菌种生长代谢的特殊性,以及好氧菌种代谢产物的检测量的需求(目前的孔板的总容积都比较小),高通量筛选孔板并不能满足好氧菌种的生长代谢的需求以及好氧菌种的检测需求。With the development of biotechnology, the construction and breeding of strains and the related research on the scale-up of fermentation engineering need to achieve high throughput to improve efficiency. Due to the low throughput and high evaporation rate of shake flasks, it consumes a lot of manpower and material resources. It takes a long time and cannot meet the current work needs. Although the high-throughput screening orifice plates currently on the market can achieve high-throughput to improve efficiency, due to the particularity of the growth and metabolism of aerobic bacteria, and The demand for the detection of metabolites of aerobic bacteria (the total volume of the current orifice plate is relatively small), the high-throughput screening orifice plate cannot meet the needs of the growth and metabolism of aerobic bacteria and the detection requirements of aerobic bacteria .
因此,本领域亟需解决传统摇瓶发酵好氧菌种时存在的菌种筛选通量低、筛选效率低、蒸发率高、菌球形态较差以及发酵效果差的问题。Therefore, there is an urgent need in the art to solve the problems of low strain screening throughput, low screening efficiency, high evaporation rate, poor morphology of bacterial spheres and poor fermentation effect that exist in traditional shake flask fermentation of aerobic strains.
发明内容Contents of the invention
本发明的目的是为了克服现有技术存在的传统摇瓶在发酵好氧菌种中时存在的菌种筛选通量低、筛选效率低、蒸发率高、菌球形态较差以及发酵效果差的问题,提供一种高通量筛选好氧菌的装置和方法以及他们的应用,该装置和方法能够有效的解决传统摇瓶发酵好氧菌种存在的菌种筛选通量低、筛选效率低、蒸发率高、菌球形态较差以及发酵效果差的问题。The purpose of the present invention is to overcome the problems of low strain screening throughput, low screening efficiency, high evaporation rate, poor shape of bacteria balls and poor fermentation effect in traditional shake flasks that exist in the prior art when fermenting aerobic strains. The problem is to provide a device and method for high-throughput screening of aerobic bacteria and their application. The device and method can effectively solve the problems of low strain screening throughput, low screening efficiency, and High evaporation rate, poor shape of bacteria balls and poor fermentation effect.
为了实现上述目的,本发明第一方面提供一种高通量发酵好氧菌种的装置,所述高通量发酵好氧菌种的装置包括高通量筛选孔板和孔板盖,所述高通量筛选孔板的微孔的内侧壁上设置有至少一个垂直于侧壁的挡板,其中,所述挡板的长度A与高通量筛选孔板的微孔的直径D之间的关系满足:0<A≤2/7D,优选为:1/35D≤A≤1/7D。In order to achieve the above object, the first aspect of the present invention provides a device for high-throughput fermentation of aerobic strains, said device for high-throughput fermentation of aerobic strains includes a high-throughput screening orifice plate and an orifice cover, said At least one baffle plate perpendicular to the side wall is provided on the inner sidewall of the microwell of the high-throughput screening orifice plate, wherein the distance between the length A of the baffle plate and the diameter D of the microwell of the high-throughput screening orifice plate is The relationship satisfies: 0<A≤2/7D, preferably: 1/35D≤A≤1/7D.
本发明第二方面提供一种好氧菌种的发酵方法,将所述好氧菌接种到装填有培养基的上述所述的装置中,以对好氧菌进行发酵培养。The second aspect of the present invention provides a method for fermenting aerobic bacteria. The aerobic bacteria are inoculated into the above-mentioned device filled with culture medium to ferment and cultivate the aerobic bacteria.
本发明第三方面提供上述所述的装置或发酵方法在高通量筛选好氧菌种中的应用。The third aspect of the present invention provides the application of the above-mentioned device or fermentation method in high-throughput screening of aerobic strains.
通过上述技术方案,采用本发明所述的高通量筛选好氧菌的装置和方法对好氧菌种进行发酵培养,该装置和方法能够有效的解决传统摇瓶发酵好氧菌种时存在的菌种筛选通量低、筛选效率低、蒸发率高、菌球形态较差以及发酵效果差的问题。例如,实施例1中,黑曲霉的筛选通量能够达到132个菌落,液体蒸发率仅为1.5%,酸度为15.67%,菌球形态成团簇的菊花状,形态较好。Through the above technical scheme, the device and method for high-throughput screening of aerobic bacteria according to the present invention are used to ferment and cultivate aerobic bacteria. The device and method can effectively solve the problems existing in traditional shake flask fermentation of aerobic bacteria Low strain screening throughput, low screening efficiency, high evaporation rate, poor shape of bacteria balls and poor fermentation effect. For example, in Example 1, the screening throughput of Aspergillus niger can reach 132 colonies, the liquid evaporation rate is only 1.5%, and the acidity is 15.67%.
附图说明Description of drawings
图1是实施例1中高通量筛选孔板的俯视图Fig. 1 is the top view of high-throughput screening orifice plate in
图2是紧固装置打开的示意图;Figure 2 is a schematic diagram of the opening of the fastening device;
图3是实施例1中发酵培养得到的黑曲霉的显微镜图。Fig. 3 is the micrograph of the Aspergillus niger obtained by fermentation culture in Example 1.
附图标记说明Explanation of reference signs
1高通量筛选孔板 11微孔 12挡板1 high-
2紧固装置 21锁盖 22锁扣 23锁钩2
具体实施方式detailed description
在本文中所披露的范围的端点和任何值都不限于该精确的范围或值,这些范围或值应当理解为包含接近这些范围或值的值。对于数值范围来说,各个范围的端点值之间、各个范围的端点值和单独的点值之间,以及单独的点值之间可以彼此组合而得到一个或多个新的数值范围,这些数值范围应被视为在本文中具体公开。Neither the endpoints nor any values of the ranges disclosed herein are limited to such precise ranges or values, and these ranges or values are understood to include values approaching these ranges or values. For numerical ranges, between the endpoints of each range, between the endpoints of each range and individual point values, and between individual point values can be combined with each other to obtain one or more new numerical ranges, these values Ranges should be considered as specifically disclosed herein.
在本发明中,在未作相反说明的情况下,使用的方位词“上”是指三明治式孔板盖与空气直接接触的位置,“下”是指三明治式孔板盖与高通量筛选孔板直接接触的位置。In the present invention, unless stated otherwise, the orientation word "upper" refers to the position where the sandwich-type orifice cover is in direct contact with the air, and "down" refers to the position where the sandwich-type orifice cover is in direct contact with the air. The position where the orifice plate is in direct contact.
本发明的第一方面提供一种高通量发酵好氧菌种的装置,所述高通量发酵好氧菌种的装置可以包括高通量筛选孔板1和孔板盖,所述高通量筛选孔板1的微孔11的内侧壁上设置有至少一个垂直于侧壁的挡板12,其中,所述挡板的长度A与高通量筛选孔板的微孔的直径D之间的关系满足:0<A≤2/7D,优选为:1/35D≤A≤1/7D。The first aspect of the present invention provides a device for high-throughput fermentation of aerobic strains. The device for high-throughput fermentation of aerobic strains may include a high-throughput
本发明中,所述挡板12的厚度T与高通量筛选孔板的微孔的直径D之间的关系满足:0<T≤1/7D,优选为1/35D≤T≤3/35D。In the present invention, the relationship between the thickness T of the
本发明中,对所述高通量筛选孔板的微孔的形状没有具体限定,可以为现有的,例如,方形孔(长方形或正方形)或圆形孔,当所述微孔的形状为方形孔时,所述直径D是指方形孔的内切圆的直径D。In the present invention, the shape of the microholes of the high-throughput screening orifice plate is not specifically limited, and can be existing, for example, square holes (rectangular or square) or circular holes, when the shape of the microholes is In the case of a square hole, the diameter D refers to the diameter D of the inscribed circle of the square hole.
本发明中,对所述挡板12的具体形状没有限定,例如,可以为长方形或正方形,本领域技术人员能够根据具体情况进行设定。In the present invention, the specific shape of the
根据本发明的一种具体实施方式,所述挡板12为长方形,所述长方形的较短的一侧的侧边与所述高通量筛选孔板1的微孔11的底壁连接,所述挡板12的较长一侧的侧边可以与所述高通量筛选孔板1的微孔11的侧壁垂直连接,较长一侧的另一侧边不与所述高通量筛选孔板1的微孔11的侧壁接触。According to a specific embodiment of the present invention, the
另外,根据本发明另一种具体的实施方式,所述长方形仅通过较短的一侧与所述高通量筛选孔板1的微孔11的底壁连接,而较长的两侧均不与所述高通量筛选孔板1的微孔11的侧壁接触。In addition, according to another specific embodiment of the present invention, the rectangle is only connected to the bottom wall of the
本发明中,所述挡板12的高度H与高通量筛选孔板1的微孔11的深度S之间的关系可以满足:0<H≤S,优选为1/2S≤H≤S。In the present invention, the relationship between the height H of the
本发明的发明人在研究中发现,当所述挡板的长度A与高通量筛选孔板的微孔的直径D之间的关系满足:1/35D≤A≤1/7D,所述挡板12的厚度T与高通量筛选孔板的微孔的直径D之间的关系满足:1/35D≤T≤3/35D,所述挡板12的高度H与高通量筛选孔板1的微孔11的深度S之间的关系可以满足:1/2S≤H≤S的情况下,能够进一步的降低蒸发率,提高发酵效果,获得较好的菌球形态。The inventors of the present invention found in research that when the relationship between the length A of the baffle and the diameter D of the microhole of the high-throughput screening orifice satisfies: 1/35D≤A≤1/7D, the baffle The relationship between the thickness T of the
本发明中,所述挡板12的长度A是指挡板12沿所述高通量筛选孔板1的微孔11的直径方向的长度。In the present invention, the length A of the
本发明中,所述深度S是指所述高通量筛选孔板1的微孔11底壁到孔口的距离。In the present invention, the depth S refers to the distance from the bottom wall of the
本发明中,所述高度H是指所述挡板12沿着深度S的方向的长度。In the present invention, the height H refers to the length of the
本发明中,所述厚度T是指垂直于所述挡板12的长度A的方向的长度。In the present invention, the thickness T refers to the length in a direction perpendicular to the length A of the
本发明中,所述孔板盖为三明治式孔板盖,所述三明治式孔板盖从上至下依次包括不锈钢孔板、过滤膜和硅胶孔板。In the present invention, the orifice plate cover is a sandwich-type orifice plate cover, and the sandwich-type orifice plate cover sequentially includes a stainless steel orifice plate, a filter membrane and a silica gel orifice plate from top to bottom.
本发明中,过滤膜没有具体限定,例如,可以为聚四氟乙烯过滤膜、滤纸或中空纤维滤膜。In the present invention, the filter membrane is not specifically limited, for example, it may be a polytetrafluoroethylene filter membrane, filter paper or hollow fiber filter membrane.
本发明中,所述高通量筛选孔板1可以选自6孔板、24孔板、48孔板、96孔板或384孔板,优选为6孔板(如图1所示)。In the present invention, the high-throughput
本发明中,所述孔板盖可以选自6孔板盖、24孔板盖、48孔板盖、96孔板盖或384孔板盖,优选为24孔板盖。In the present invention, the well plate cover can be selected from a 6-well plate cover, a 24-well plate cover, a 48-well plate cover, a 96-well plate cover or a 384-well plate cover, preferably a 24-well plate cover.
本发明中,所述孔板盖可以选自6孔板盖、24孔板盖、48孔板盖、96孔板盖或384孔板盖意指所述孔板盖中的不锈钢孔板的孔的个数分别为6孔、24孔、48孔、96孔或384孔。In the present invention, the orifice plate cover can be selected from a 6-well plate cover, a 24-well plate cover, a 48-well plate cover, a 96-well plate cover or a 384-well plate cover, which means the holes of the stainless steel orifice plate in the orifice plate cover The number of holes is 6 holes, 24 holes, 48 holes, 96 holes or 384 holes.
本发明中,所述孔板盖中的硅胶孔板的孔的个数可以大于、小于或等于孔板盖的孔的个数,优选情况下,所述孔板盖中的硅胶孔板的孔的个数等于不锈钢孔板的孔的个数。根据本发明一种具体的实施方式,所述孔板盖中的硅胶孔板的孔的个数等于不锈钢孔板的孔的个数,所述高通量筛选孔板1上的每个微孔11能够与硅胶孔板中的四个孔相对应。In the present invention, the number of holes of the silica gel orifice plate in the orifice plate cover can be greater than, less than or equal to the number of holes of the orifice plate cover, preferably, the holes of the silica gel orifice plate in the orifice plate cover The number is equal to the number of holes in the stainless steel orifice plate. According to a specific embodiment of the present invention, the number of holes of the silica gel orifice plate in the orifice plate cover is equal to the number of holes of the stainless steel orifice plate, and each microwell on the high-throughput
本发明中,所述孔板盖(不锈钢孔板)上的孔的直径可以为1-4mm,所述硅胶孔板的直径可以为1-3mm,特别的,当孔板盖(不锈钢孔板)上的孔的直径为2.5-4mm,所述硅胶孔板的直径为1-2mm,在不影响好氧菌发酵效果的情况下,能够进一步降低液体蒸发量。In the present invention, the diameter of the holes on the orifice plate cover (stainless steel orifice plate) can be 1-4mm, and the diameter of the silica gel orifice plate can be 1-3mm. Particularly, when the orifice plate cover (stainless steel orifice plate) The diameter of the hole on the top is 2.5-4mm, and the diameter of the silica gel orifice plate is 1-2mm, which can further reduce the liquid evaporation without affecting the fermentation effect of aerobic bacteria.
根据本发明一种优选实施方式,所述高通量筛选孔板1为6孔板(如图1所示),所述不锈钢孔板的孔的个数为24孔,所述硅胶孔板的孔的个数为24孔。According to a preferred embodiment of the present invention, the high-throughput
本发明中,所述高通量筛选孔板1的总容积可以为30-360mL,特别的,在本发明中,当采用高通量筛选孔板1为6孔板(如图1所示)时,可以为好氧菌种提供更好的生长环境,并且提高好氧菌的筛选通量,提高筛选效率,优选情况下,所述高通量筛选孔板1的总容积可以为240-300mL。In the present invention, the total volume of the high-
本发明中,所述筛选通量是指在进行一次好氧菌培养的过程中,同一个摇床上能够放置的高通量筛选孔板或摇瓶中能够接种的好氧菌的菌落的数量(即摇床上的高通量筛选孔板和摇瓶的一次培养量)。In the present invention, the screening throughput refers to the number of bacterium colonies ( That is, the high-throughput screening plate on the shaker and the amount of one culture of the shaker flask).
本发明中,所述装置还可以包括夹具,所述夹具用于将所述高通量筛选孔板1固定在摇床上,并将所述孔板盖固定在所述高通量筛选孔板1上。In the present invention, the device may also include a clamp, which is used to fix the high-throughput
如图2所示,根据本法明的一种优选实施方式,所述夹具可以包括底座、紧固装置2以及将底座固定在摇床上的固定机构,其中,所述紧固装置用于将所述孔板盖固定在所述高通量筛选孔板上,在本发明中,所述高通量筛选孔板1可以放置在底座中。As shown in Fig. 2, according to a preferred embodiment of the present invention, the clamp may include a base, a
本发明中,对所述底座没有具体限定,所述底座可以包括两个侧壁或四个侧壁,当为两个侧壁时,两个侧壁相互平行,当为四个侧壁时,四个侧壁相互连接的位置互相垂直。In the present invention, the base is not specifically limited. The base may include two side walls or four side walls. When there are two side walls, the two side walls are parallel to each other. When there are four side walls, The positions where the four side walls are connected to each other are perpendicular to each other.
本发明中,所述紧固装置2可以包括锁盖21、锁扣22和锁钩23,所述锁扣22设置在所述锁盖21上,所述锁盖21设置在所述底座的侧壁上,所述锁钩23设置在所述孔板盖上,所述紧固装置通过锁扣和锁钩的锁合将所述孔板盖固定在所述高通量筛选孔板上。In the present invention, the
本发明中,对所述固定机构没有具体限定,可以为现有的能够用于固定的,例如,所述固定机构可以为螺栓,也可以为焊接。In the present invention, the fixing mechanism is not specifically limited, and may be an existing one that can be used for fixing. For example, the fixing mechanism may be bolts or welding.
本发明中,关于所述夹具的一种具体的实施方式,所述底座通过螺栓固定在摇床上,并且所述底座包括相互平行的两个侧壁,所述两个侧壁上各自设置有所述紧固装置2中的锁盖21,所述锁盖21上设置有锁扣22,所述孔板盖与底座的两个侧壁相对应的两个侧边上设置有所述紧固装置2的锁钩23,所述紧固装置2的锁盖21铰接在底座的侧壁上,所述锁扣22铰接在所述锁盖21上,所述锁扣22能够卡入锁钩23中,所述紧固装置2松开时的示意图如图2所示。In the present invention, regarding a specific implementation of the clamp, the base is fixed on the shaker by bolts, and the base includes two side walls parallel to each other, and each of the two side walls is provided with a The lock cover 21 in the
本发明的第二方面提供一种好氧菌种的发酵方法,所述方法可以包括将所述好氧菌接种到装填有培养基的上述的高通量筛选孔板1的微孔11中,对好氧菌进行发酵培养。The second aspect of the present invention provides a method for fermenting aerobic bacteria, which may include inoculating the aerobic bacteria into the
本发明中,所述好氧菌可以为任意的好氧菌,优选选自根霉、毛霉、脉孢菌、曲霉或青霉,更优选为曲霉。In the present invention, the aerobic bacteria can be any aerobic bacteria, preferably selected from Rhizopus, Mucor, Neurospora, Aspergillus or Penicillium, more preferably Aspergillus.
本发明中,所述曲霉可以选自黄曲霉、黑曲霉或烟曲霉,根据本发明一种优选实施方式,所述曲霉为黑曲霉。In the present invention, the Aspergillus can be selected from Aspergillus flavus, Aspergillus niger or Aspergillus fumigatus, and according to a preferred embodiment of the present invention, the Aspergillus is Aspergillus niger.
本发明中,在所述高通量筛选孔板1中,以每毫升培养基为基准,所述好氧菌种的接种量使得好氧菌的孢子数量为5-40万孢子,根据本发明一种优选实施方式,以每毫升培养基为基准,所述好氧菌种的接种量使得好氧菌的孢子数量为15-30万孢子,在本发明中,所述孢子数量可以按照血球平板计数法测得。In the present invention, in the high-throughput
本发明中,将好氧菌接种到培养基之前,还需要对培养基进行灭菌处理,在本发明中,对所述灭菌的条件没有具体限定,可以为现有的,能够用于培养基灭菌的,例如,所述灭菌条件可以为:灭菌温度为121-125℃、压力为0.1-0.15MPa下灭菌20-30min。In the present invention, before the aerobic bacteria are inoculated into the medium, the medium needs to be sterilized. In the present invention, the conditions for the sterilization are not specifically limited, and can be existing and can be used for culturing Based sterilization, for example, the sterilization conditions may be: sterilization temperature of 121-125° C. and pressure of 0.1-0.15 MPa for 20-30 minutes.
根据本发明的好氧菌种的发酵方法,对培养基的成分没有特别的要求,只要可以用于好氧菌种的发酵培养基即可。优选地,当所述好氧菌种为黑曲霉时,培养基含有由淀粉质原料酶解得到的酶解产物,且优选由淀粉质原料酶解得到的酶解产物的量占发酵培养基总量的80-100重量%。一般地,淀粉质原料酶解得到的产物称为液化液,液化液经固液分离得到酶解残渣和液化清液,通常可以将液化清液用于制备培养基,也可以将液化清液与液化液混合后用于制备培养基。因此,本发明中,所述由淀粉质原料酶解得到的酶解产物包括上述经固液分离得到的液化清液,也包括未经固液分离的液化液,还包括上述二者的混合物。培养基优选由液化液和液化清液与水混合或不与水混合得到,其中,液化液和液化清液的总糖为10-20%,液化液和液化清液的重量可以为(0.1-0.3):1。According to the fermentation method of aerobic strains of the present invention, there is no special requirement on the composition of the medium, as long as it can be used for the fermentation medium of aerobic strains. Preferably, when the aerobic strain is Aspergillus niger, the culture medium contains enzymolyzed products obtained from enzymatic hydrolysis of starchy raw materials, and preferably the amount of enzymolyzed products obtained from enzymatically hydrolyzed starchy raw materials accounts for 80-100% by weight of the amount. Generally, the product obtained by enzymatic hydrolysis of starchy raw materials is called liquefaction liquid, and the liquefaction liquid is separated from solid and liquid to obtain enzymatic hydrolysis residue and liquefied supernatant liquid. Usually, the liquefied supernatant liquid can be used to prepare the culture medium, or the liquefied supernatant liquid can be combined with The liquefied solution is mixed and used to prepare the culture medium. Therefore, in the present invention, the enzymatic hydrolysis product obtained from the enzymatic hydrolysis of starch raw materials includes the above-mentioned liquefied supernatant liquid obtained through solid-liquid separation, also includes liquefied liquid without solid-liquid separation, and also includes a mixture of the above two. The culture medium is preferably obtained by mixing the liquefied liquid and the liquefied supernatant with water or not mixing with water, wherein the total sugar of the liquefied liquid and the liquefied supernatant is 10-20%, and the weight of the liquefied liquid and the liquefied supernatant can be (0.1- 0.3):1.
本发明中,所述淀粉液化清液可以通过多种方法制备得到,例如,可以通过如下方法制备得到:将淀粉质原料粉碎,将粉碎后的产物进行酶解,酶解得到的产物再经固液分离,得到液化清液和酶解残渣,固液分离的条件使酶解残渣的固含量为45-55重量%,优选为49-51重量%。In the present invention, the starch liquefaction supernatant can be prepared by various methods, for example, it can be prepared by the following method: pulverize the starchy raw material, perform enzymolysis on the pulverized product, and then solidify the product obtained by enzymolysis. liquid separation to obtain liquefied clear liquid and enzymolysis residue, and the solid-liquid separation condition makes the solid content of the enzymolysis residue 45-55% by weight, preferably 49-51% by weight.
淀粉质原料可以为本领域公知的各种可以用于酶解、发酵制备柠檬酸的含有淀粉的原料,例如,可以选自玉米、薯类(如木薯)和小麦中的一种或几种,优选情况下,所述淀粉质原料为玉米。The starchy raw material can be various starch-containing raw materials known in the art that can be used for enzymolysis and fermentation to prepare citric acid, for example, can be selected from one or more of corn, potatoes (such as cassava) and wheat, Preferably, the starchy raw material is corn.
本发明中,在所述高通量筛选孔板1中,所述培养基的总用量可以为30-120g,所述培养基等量分装到高通量筛选孔板1的每个微孔11中。In the present invention, in the high-throughput
本发明中,所述发酵培养在搅拌的条件下进行,所述发酵培养的条件可以包括:温度为30-40℃,时间为36-96h,搅拌速度为200-400rpm,优选地,所述发酵培养的条件可以包括:温度为35-40℃,时间为50-80h,搅拌速度为200-300rpm。In the present invention, the fermentation culture is carried out under the condition of stirring, and the conditions of the fermentation culture may include: the temperature is 30-40°C, the time is 36-96h, and the stirring speed is 200-400rpm. Preferably, the fermentation The cultivation conditions may include: the temperature is 35-40° C., the time is 50-80 hours, and the stirring speed is 200-300 rpm.
本发明的第三方面提供一种上述所述装置或发酵方法在高通量筛选好氧菌种中的应用。The third aspect of the present invention provides an application of the above-mentioned device or fermentation method in high-throughput screening of aerobic strains.
本发明中,采用所述装置或方法对好氧菌种进行发酵,能够有效的降低高通量筛选孔板1中液体的蒸发率,并且得到的好氧菌种的菌球形态成团簇菊花状,菌球形态较好,与传统摇瓶培养相比,采用所述装置和方法对好氧菌种进行发酵的菌丝长度缩短5-10%,得到的菌丝的长度较短,有助于好氧菌种之间的空气流通,即使在好氧菌种发酵的过程中,也能为好氧菌种提供优良的发酵环境。In the present invention, using the device or method to ferment the aerobic strains can effectively reduce the evaporation rate of the liquid in the high-throughput
以下将通过实施例对本发明进行详细描述。The present invention will be described in detail below by way of examples.
以下实施例中,In the following examples,
筛选通量是指在同一尺寸的摇床上,能够放置的高通量筛选孔板或摇瓶对菌落的一次培养量,在同一个摇床板(长×宽=60cm×40cm)上能够放置22个高通量筛选孔板或者40个摇瓶,则高通量筛选孔板的筛选通量为132个(高通量筛选孔板为6孔板,每个微孔接种一个菌落),摇瓶的筛选通量为40个(每个摇瓶中接种一个菌落)。Screening throughput refers to the one-time culture capacity of high-throughput screening orifice plates or shake flasks that can be placed on a shaker of the same size, and 22 colonies can be placed on the same shaker plate (length×width=60cm×40cm) High-throughput screening orifice plate or 40 shake flasks, then the screening throughput of the high-throughput screening orifice plate is 132 (the high-throughput screening orifice plate is a 6-well plate, and each microwell is inoculated with one colony), and the number of shake flasks The screening throughput was 40 (one colony was inoculated per shake flask).
装填系数(%)=(加入到反应器的物质的总体积(mL)/反应器的容积(mL))×100%;Filling factor (%)=(total volume (mL)/volume (mL) of the reactor added to the material of the reactor) × 100%;
液体蒸发率(%)=(发酵前加入到反应器中的物质的总重量(g)-发酵结束后反应器中物质的总重量(g)/发酵前加入到高通量筛选孔板中的物质的总重量(g))×100%,所述反应器包括高通量筛选孔板和摇瓶,所述物质包括培养基和黑曲霉孢子悬浮液;Liquid evaporation rate (%)=(the total weight (g) of the material that is added to the reactor before fermentation-the total weight (g) of the material in the reactor after the end of fermentation/the total weight (g) that is added to the high-throughput screening orifice plate before the fermentation The gross weight of material (g)) * 100%, described reactor comprises high-throughput screening orifice plate and shake flask, and described material comprises culture medium and Aspergillus niger spore suspension;
酸度参数通过NaOH滴定法测定,参照国标GBT 8269-2006测得;The acidity parameter is measured by NaOH titration method, measured with reference to the national standard GBT 8269-2006;
转化率(%)=(发酵液的浓度×发酵液的体积/总糖的重量)×100%,其中,所得发酵液的浓度简称酸度;Conversion rate (%)=(the concentration of fermented liquid * the weight of the volume of fermented liquid/total sugar) * 100%, wherein, the concentration of gained fermented liquid is referred to as acidity;
菌球形态通过显微镜测得(上海天省仪器有限公司,型号为)XSP-16C的电脑型生物显微镜,菌球形态成团簇的菊花状(如图3所示),则菌球形态的等级为优;菌球形态成团簇的菊花状,但是有断裂的菌丝片段,则菌球形态为良;菌球形态较散(非团簇状),且有断裂菌丝片段,则菌球形态的等级为差;The shape of the bacteria ball is measured by a microscope (Shanghai Tiansheng Instrument Co., Ltd., model is) XSP-16C computer-based biological microscope. is excellent; the shape of the chrysanthemum ball is clustered and chrysanthemum-like, but there are broken hyphae fragments, the shape of the mycelium is good; The grade of form is poor;
黑曲霉购自中国微生物菌种保藏中心保藏,菌种型号为黑曲霉CO827。Aspergillus niger was purchased from China Microorganism Culture Collection Center, and the strain type was Aspergillus niger CO827.
实施例1Example 1
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
(1)将培养基加入到6孔板的高通量筛选孔板的微孔中(每个微孔的容积为50mL,微孔中挡板的规格满足:A=2/35D,H=S,T=1/35D,挡板的个数为4个(等距竖直排列)),并在0.15MPa、121℃下灭菌30min,冷却至35℃,备用,其中,培养基为玉米液化液和玉米液化清液,总糖为16.15重量%,每个微孔中培养基的装填量为10mL;(1) Add the culture medium to the microwells of the high-throughput screening well plate of the 6-well plate (the volume of each microwell is 50mL, and the specifications of the baffles in the microwells meet: A=2/35D, H=S , T=1/35D, the number of baffles is 4 (equally spaced and vertically arranged)), and sterilized at 0.15MPa, 121°C for 30min, cooled to 35°C, and set aside, wherein the medium is corn liquefaction liquid and corn liquefaction supernatant, the total sugar is 16.15% by weight, and the filling amount of the culture medium in each microwell is 10mL;
(2)将黑曲霉(黑曲霉孢子悬浮液)接种到步骤(1)的培养基中,每毫升培养基的接种量为20万孢子;(2) Aspergillus niger (Aspergillus niger spore suspension) is inoculated into the medium of step (1), and the inoculation amount of every milliliter of medium is 200,000 spores;
(3)将24孔板盖(硅胶孔板上的孔数为24个,不锈钢孔板上的直径为2.5mm,硅胶孔板的直径为1mm)的三明治式孔板盖盖合在高通量筛选孔板上;(3) Put a 24-well plate cover (the number of holes on the silica gel plate is 24, the diameter of the stainless steel plate is 2.5 mm, and the diameter of the silica gel plate is 1 mm) with a sandwich-type orifice plate cover on the high-throughput screening orifice plate;
(4)将高通量筛选孔板通过夹具固定在摇床上,并将孔板盖固定在高通量筛选孔板上(所述夹具的紧固装置如图2所示),进行发酵培养,发酵培养的条件为:温度为35℃,时间为72h,搅拌速度为300rpm。(4) The high-throughput screening orifice plate is fixed on the shaker by a clamp, and the orifice cover is fixed on the high-throughput screening orifice plate (the fastening device of the clamp is shown in Figure 2), and the fermentation is carried out. The conditions of the fermentation culture were as follows: the temperature was 35° C., the time was 72 hours, and the stirring speed was 300 rpm.
对筛选通量、蒸发率、酸度、转化率和菌球形态分别进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured respectively, and the results are shown in Table 1.
实施例2Example 2
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
(1)将培养基加入到6孔板的高通量筛选孔板的微孔中(每个微孔的容积为40mL,微孔中挡板的规格满足:A=3/35D,H=3/4S,T=2/35D,挡板的个数为4个(等距竖直排列)),并在0.12MPa、123℃下灭菌25min,冷却至37℃,备用,其中,培养基为玉米液化液和玉米液化清液,总糖为18重量%,每个微孔中培养基的装填量为10mL;(1) Add the culture medium to the microwells of the high-throughput screening well plate of the 6-well plate (the volume of each microwell is 40mL, and the specifications of the baffles in the microwells meet: A=3/35D, H=3 /4S, T=2/35D, the number of baffles is 4 (equally spaced and vertically arranged)), and sterilized at 0.12MPa, 123°C for 25min, cooled to 37°C, and set aside, wherein, the culture medium is For corn liquefaction liquid and corn liquefaction clear liquid, the total sugar is 18% by weight, and the loading amount of the culture medium in each microwell is 10 mL;
(2)将黑曲霉(黑曲霉孢子悬浮液)接种到步骤(1)的培养基中,每毫升培养基的接种量为22万孢子;(2) Aspergillus niger (Aspergillus niger spore suspension) is inoculated into the medium of step (1), and the inoculation amount of every milliliter of medium is 220,000 spores;
(3)将24孔板盖(硅胶孔板上的孔数为24个,不锈钢孔板上的直径为3mm,硅胶孔板的直径为1.5mm)的三明治式孔板盖盖合在高通量筛选孔板上;(3) Put the 24-well plate cover (the number of holes on the silica gel plate is 24, the diameter of the stainless steel plate is 3 mm, and the diameter of the silica gel plate is 1.5 mm) with a sandwich-type orifice plate cover on the high-throughput screening orifice plate;
(4)将高通量筛选孔板通过夹具(如图2所示)固定在摇床上,并将孔板盖固定在高通量筛选孔板上(所述夹具的紧固装置如图2所示),进行发酵培养,发酵培养的条件为:温度为37℃,时间为72h,搅拌速度为250rpm。(4) The high-throughput screening orifice plate is fixed on the shaker by a clamp (as shown in Figure 2), and the orifice cover is fixed on the high-throughput screening orifice plate (the fastening device of the clamp is shown in Figure 2 Shown), carry out fermentation culture, the condition of fermentation culture is: temperature is 37 ℃, time is 72h, and stirring speed is 250rpm.
对筛选通量、蒸发率、酸度、转化率和菌球形态分别进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured respectively, and the results are shown in Table 1.
实施例3Example 3
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
(1)将培养基加入到6孔板的高通量筛选孔板的微孔中(每个微孔的体积为45mL,微孔中挡板的规格满足:A=1/14D,H=1/2S,T=3/35D,挡板的个数为4个(等距竖直排列)),并在0.13MPa、124℃下灭菌22min,冷却至40℃,备用,其中,培养基为玉米液化液和玉米液化清液,总糖为16.5重量%,每个微孔中培养基的装填量为10mL;(1) Add the culture medium to the microwells of the high-throughput screening well plate of the 6-well plate (the volume of each microwell is 45mL, and the specifications of the baffles in the microwells meet: A=1/14D, H=1 /2S, T=3/35D, the number of baffles is 4 (equally spaced and vertically arranged)), and sterilized at 0.13MPa, 124°C for 22min, cooled to 40°C, and set aside, wherein, the culture medium is For corn liquefaction liquid and corn liquefaction clear liquid, the total sugar is 16.5% by weight, and the filling amount of the culture medium in each microwell is 10 mL;
(2)将黑曲霉接(黑曲霉孢子悬浮液)种到步骤(1)的培养基中,每毫升培养基的接种量为18万孢子;(2) Aspergillus niger is inoculated (Aspergillus niger spore suspension) is planted in the substratum of step (1), and the inoculation amount of every milliliter of substratum is 180,000 spores;
(3)将24孔板盖(硅胶孔板上的孔数为24个,不锈钢孔板上的直径为3.5mm,硅胶孔板的直径为2mm)的三明治式孔板盖盖合在高通量筛选孔板上;(3) Put a 24-well plate cover (the number of holes on the silica gel plate is 24, the diameter of the stainless steel plate is 3.5 mm, and the diameter of the silica gel plate is 2 mm) with a sandwich-type orifice plate cover on the high-throughput screening orifice plate;
(4)将高通量筛选孔板通过夹具固定在摇床上,并将孔板盖固定在高通量筛选孔板上(所述夹具的紧固装置如图2所示),进行发酵培养,发酵培养的条件为:温度为40℃,时间为72h,搅拌速度为200rpm。(4) The high-throughput screening orifice plate is fixed on the shaker by a clamp, and the orifice cover is fixed on the high-throughput screening orifice plate (the fastening device of the clamp is shown in Figure 2), and the fermentation is carried out. The conditions of the fermentation culture are as follows: the temperature is 40° C., the time is 72 hours, and the stirring speed is 200 rpm.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例4Example 4
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,步骤(1)中,总糖为20重量%,步骤(2)将黑曲霉(黑曲霉孢子悬浮液)接种到步骤(1)的培养基中,每毫升培养基的接种量为25万孢子。According to the method of Example 1, the difference is that in step (1), the total sugar is 20% by weight, and step (2) inoculates Aspergillus niger (Aspergillus niger spore suspension) into the medium of step (1), every The inoculum size per milliliter of medium is 250,000 spores.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例5Example 5
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,每个微孔的容积为35mL。According to the method of Example 1, the difference is that the volume of each microwell is 35 mL.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例6Example 6
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,将24孔板盖(硅胶孔板盖上的孔数为24个)的三明治式孔板盖替换为96孔板盖(硅胶孔板盖上的孔数为96个)的三明治式孔板盖。According to the method of Example 1, the difference is that the sandwich type orifice cover of the 24-well plate cover (the number of holes on the silica gel orifice cover is 24) is replaced by a 96-well plate cover (the number of holes on the silica gel orifice cover is 24). 96) sandwich orifice cover.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例7Example 7
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,6孔板的高通量筛选孔板替换为24孔板的高通量筛选孔板,具体为:According to the method of Example 1, the difference is that the high-throughput screening orifice plate of the 6-well plate is replaced by the high-throughput screening orifice plate of the 24-well plate, specifically:
(1)将培养基加入到6孔板的高通量筛选孔板的微孔中(每个微孔的容积为12.5mL,微孔中挡板的规格满足:A=2/35D,H=S,T=1/35D,挡板的个数为4个(等距竖直排列)),并在0.15MPa、121℃下灭菌30min,冷却至35℃,备用,其中,培养基为玉米液化液和玉米液化清液,总糖为16.15重量%,每个微孔中培养基的装填量为2.5mL;(1) Add the culture medium to the microwells of the high-throughput screening well plate of the 6-well plate (the volume of each microwell is 12.5mL, and the specifications of the baffles in the microwells meet: A=2/35D, H= S, T=1/35D, the number of baffles is 4 (equally spaced and vertically arranged)), and sterilized at 0.15MPa, 121°C for 30min, cooled to 35°C, and set aside, wherein the medium is corn Liquefaction liquid and corn liquefaction supernatant liquid, the total sugar is 16.15% by weight, and the loading amount of the culture medium in each microwell is 2.5mL;
(2)将黑曲霉接(黑曲霉孢子悬浮液)种到步骤(1)的培养基中,每毫升培养基的接种量为20万孢子。(2) Inoculate Aspergillus niger (Aspergillus niger spore suspension) into the culture medium of step (1), and the inoculum amount per milliliter of culture medium is 200,000 spores.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例8Example 8
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,微孔中挡板的满足:A=2/7D,H=1/3S,T=1/7D,挡板的个数为4个(等距竖直排列))。According to the method of
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
实施例9Example 9
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,24孔板盖的不锈钢孔板上的直径为2mm,硅胶孔板的直径为2mm。According to the method of Example 1, the difference is that the diameter of the stainless steel orifice plate of the 24-well plate cover is 2 mm, and the diameter of the silica gel orifice plate is 2 mm.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and morphology of bacterial spheres were measured, and the results are shown in Table 1.
实施例10Example 10
本实施例用于说明本发明提供的高通量筛选好氧菌的装置和方法This example is used to illustrate the device and method for high-throughput screening of aerobic bacteria provided by the present invention
按照实施例1的方法,不同的是,搅拌速度为400rpm。According to the method of Example 1, the difference is that the stirring speed is 400 rpm.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
对比例1Comparative example 1
本对比例用于说明现有技术中对好氧菌的装置和方法This comparative example is used to illustrate the device and method for aerobic bacteria in the prior art
按照实施例1的方法,不同的是,采用摇瓶对黑曲霉进行发酵,具体的,According to the method of Example 1, the difference is that Aspergillus niger is fermented by shake flasks, specifically,
(1)将培养基加入到40个250mL摇瓶中,并在0.15MPa、121℃下灭菌30min,冷却至35℃,备用,其中,培养基为玉米液化液和玉米液化清液,总糖为16.15重量%,摇瓶中培养基的装填量为40mL;(1) Add the medium to 40 250mL shake flasks, sterilize at 0.15MPa, 121°C for 30min, cool to 35°C, and set aside. is 16.15% by weight, and the loading amount of the culture medium in the shake flask is 40mL;
(2)将黑曲霉接(黑曲霉孢子悬浮液)种到步骤(1)的培养基中,每毫升培养基的接种量为20万孢子;(2) Aspergillus niger is inoculated (Aspergillus niger spore suspension) is planted in the substratum of step (1), and the inoculum size of every milliliter of substratum is 200,000 spores;
(3将摇瓶通过夹具固定在摇床上,对黑曲霉进行发酵培养,发酵培养的条件为:温度为35℃,时间为72h,搅拌速度为300rpm。(3 The shaking flask is fixed on the shaker by the clamp, and Aspergillus niger is fermented and cultivated, the conditions of the fermentation and culture are: the temperature is 35°C, the time is 72h, and the stirring speed is 300rpm.
对筛选通量、蒸发率、酸度、转化率和菌球形态进行测定,结果如表1所示。The screening flux, evaporation rate, acidity, conversion rate and spheroid morphology were measured, and the results are shown in Table 1.
表1Table 1
从实施例1-10、对比例1以及表1中可知,在相同的发酵条件下,与传统的好氧菌种的发酵方法(对比例1)相比,采用本发明的高通量发酵好氧菌种的装置和方法,有效的提高了黑曲霉的筛选效率和发酵效果(酸度较高),降低了蒸发率,并且菌球形态好;As can be seen from Examples 1-10, Comparative Example 1 and Table 1, under the same fermentation conditions, compared with the fermentation method (Comparative Example 1) of traditional aerobic strains, the high-throughput fermentation of the present invention is better The device and method of oxygen bacteria effectively improve the screening efficiency and fermentation effect (higher acidity) of Aspergillus niger, reduce the evaporation rate, and the shape of the bacteria ball is good;
特别地,由实施例1-3可知,当所述挡板的长度A与高通量筛选孔板的微孔的直径D之间的关系满足:1/35D≤A≤1/7D,所述挡板12的厚度T与高通量筛选孔板的微孔的直径D之间的关系满足:1/35D≤T≤3/35D,所述挡板12的高度H与高通量筛选孔板1的微孔11的深度S之间的关系可以满足:1/2S≤H≤S,且采用6孔板的高通量筛选孔板的情况下,能够进一步的降低蒸发率,提高发酵效果,获得较好的菌球形态。In particular, as can be seen from Examples 1-3, when the relationship between the length A of the baffle and the diameter D of the microhole of the high-throughput screening orifice plate satisfies: 1/35D≤A≤1/7D, the The relationship between the thickness T of the
以上详细描述了本发明的优选实施方式,但是,本发明并不限于此。在本发明的技术构思范围内,可以对本发明的技术方案进行多种简单变型,包括各个技术特征以任何其它的合适方式进行组合,这些简单变型和组合同样应当视为本发明所公开的内容,均属于本发明的保护范围。The preferred embodiments of the present invention have been described in detail above, however, the present invention is not limited thereto. Within the scope of the technical concept of the present invention, various simple modifications can be made to the technical solution of the present invention, including the combination of various technical features in any other suitable manner, and these simple modifications and combinations should also be regarded as the content disclosed in the present invention. All belong to the protection scope of the present invention.
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