CN103451215B - Barbadosnut gene, recombinant plasmid and application thereof for improving salt resistance and drought tolerance of plants - Google Patents
Barbadosnut gene, recombinant plasmid and application thereof for improving salt resistance and drought tolerance of plants Download PDFInfo
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- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
Abstract
本发明属于植物基因工程领域,提供了一种从麻疯树克隆得到的基因JcSnRK2、含所述基因的真核重组质粒及植物转化体,实验表明:JcSnRK2基因的表达能够促进拟南芥SnRK2.8缺失型植株根系的生长,明显提高其耐高盐及抗干旱能力,降低叶片的失水率,能够激发响应渗透胁迫的下游基因的表达。因此,本发明所述JcSnRK2基因和真核重组质粒可在提高植物抗盐、耐旱性中应用。The invention belongs to the field of plant genetic engineering and provides a gene JcSnRK2 cloned from Jatropha curcas, a eukaryotic recombinant plasmid containing the gene and a plant transformant. Experiments show that the expression of the JcSnRK2 gene can promote Arabidopsis SnRK2. The root growth of 8-deficient plants can significantly improve their high salt tolerance and drought resistance, reduce the water loss rate of leaves, and stimulate the expression of downstream genes that respond to osmotic stress. Therefore, the JcSnRK2 gene and the eukaryotic recombinant plasmid of the present invention can be used in improving the salt resistance and drought tolerance of plants.
Description
技术领域technical field
本发明属于植物基因工程领域,特别涉及一种从麻疯树克隆得到的基因、含所述基因的真核重组质粒及其应用。The invention belongs to the field of plant genetic engineering, in particular to a gene cloned from Jatropha curcas, a eukaryotic recombinant plasmid containing the gene and application thereof.
背景技术Background technique
在植物的生长和发育过程中,经常会遭遇到各种环境压力,譬如干旱、盐碱、高温或寒冷、氧化、营养缺乏、病原体侵入等等,特别是全球水资源紧张以及近一半农业灌溉土地受到高盐胁迫的影响,造成农作物产量下降甚至引起植物死亡。近年来,通过基因工程手段进行人工育种已经成为赋予植物逆境耐受能力的主要生物手段。During the growth and development of plants, they often encounter various environmental stresses, such as drought, salinity, high temperature or cold, oxidation, nutrient deficiency, pathogen invasion, etc., especially the global water shortage and nearly half of the agricultural irrigated land Affected by high-salt stress, crop yields decrease or even cause plant death. In recent years, artificial breeding through genetic engineering has become the main biological means to endow plants with stress tolerance.
SnRK2(蔗糖非酵解型蛋白激酶2,sucrose non-fermenting1-related protein kinase2)与植物的逆境胁迫应答关系密切,目前认识相对全面的是拟南芥和水稻,均各有10个家族成员,前者命名为SnRK2.1~SnRK2.10(Hrabak EM,et al.,2003,The Arabidopsis CDPK–SnRKsuperfamily of protein kinases,Plant Physiology,132,666–680),后者命名为SAPK1~SAPK10(Kobayashi Y,et al.,2004,Differential activation of the rice sucrose nonfermenting1-relatedprotein kinase2family by hyperosmotic stress and abscisic acid,The Plant Cell,16(5):1163-1177)。最近也有关于小麦TaSnRK2.4和玉米ZmSAPK8基因功能的分析,其在拟南芥中的过量表达均能提高转基因植株的多种抗胁迫能力(Mao XG,et al.,2010,TaSnRK2.4,anSNF1-type serine/threonine protein kinase of wheat(Triticum aestivum L.),confers enhancedmultistress tolerance in Arabidopsis,Journal of Experimental Botany,61(3):683–696;Ying S,etal.,2011,Cloning and characterization of a maize SnRK2protein kinase gene confers enhancedsalt tolerance in transgenic Arabidopsis,Plant Cell Rep,30:1683–1699)。虽然SnRK2家族受到关注和研究,但在木本植物中却鲜有研究,在麻疯树(Jatropha curcas L.)的研究中也尚未见报道。通过克隆技术筛选出更多的SnRK2基因,对于提高植物抗性,培育出能够在高盐、干旱条件下仍能正常生长的植物具有重要作用。SnRK2 (sucrose non-fermenting1-related protein kinase2) is closely related to the adversity stress response of plants. At present, Arabidopsis and rice have relatively comprehensive understanding, each of which has 10 family members. The former Named SnRK2.1~SnRK2.10 (Hrabak EM, et al., 2003, The Arabidopsis CDPK–SnRK superfamily of protein kinases, Plant Physiology, 132, 666–680), the latter named SAPK1~SAPK10 (Kobayashi Y, et al. al., 2004, Differential activation of the rice sucrose nonfermenting1-relatedprotein kinase2family by hyperosmotic stress and abscisic acid, The Plant Cell, 16(5):1163-1177). Recently, there are also analyzes on the function of wheat TaSnRK2.4 and maize ZmSAPK8 genes, and their overexpression in Arabidopsis can improve the various stress resistance of transgenic plants (Mao XG, et al., 2010, TaSnRK2.4, anSNF1 -type serine/threonine protein kinase of wheat (Triticum aestivum L.), confers enhanced multistress tolerance in Arabidopsis, Journal of Experimental Botany, 61(3):683–696; Ying S, et al., 2011, Cloning and characterization of a maize SnRK2protein kinase gene confers enhancedsalt tolerance in transgenic Arabidopsis, Plant Cell Rep, 30:1683–1699). Although the SnRK2 family has received attention and research, it has rarely been studied in woody plants, and it has not been reported in the study of Jatropha curcas L. Screening more SnRK2 genes through cloning technology plays an important role in improving plant resistance and cultivating plants that can still grow normally under high-salt and drought conditions.
发明内容Contents of the invention
本发明的目的之一是提供一种从麻疯树克隆得到的基因、含所述基因的真核重组质粒及植物转化体,本发明的目的之二是将所述基因和真核重组质粒在提高植物抗盐、耐旱性中应用,以培育出具有高盐、干旱抗性的植株。One of purpose of the present invention is to provide a kind of gene that obtains from Jatropha curcas clone, eukaryotic recombinant plasmid containing said gene and plant transformant, two of purpose of the present invention is described gene and eukaryotic recombinant plasmid in It can be used in improving plant salt resistance and drought tolerance to cultivate plants with high salt and drought resistance.
本发明的技术方案如下:Technical scheme of the present invention is as follows:
利用现有草本植物SnRK2基因的保守序列设计扩增中间片段的简并引物,根据所得中间片段序列进行5′Race和3′Race分别获得上、下游序列,然后根据拼接序列设计特异引物,以麻疯树叶片总RNA为模板进行RT-PCR扩增得到基因全长,命名为JcSnRK2。序列分析显示,所述JcSnRK2基因的mRNA包含1017个碱基的开放阅读框,其核苷酸序列如序列表中SEQ ID No:1所示,其基因组DNA核苷酸序列如序列表中SEQ ID No:2所示,所述JcSnRK2基因编码的多肽的氨基酸序列如序列表中SEQ ID No:3所示。生物信息学分析和基因表达模式分析显示,JcSnRK2基因属于SnRK2家族成员。Use the conserved sequence of the existing herbaceous SnRK2 gene to design degenerate primers for amplifying the middle fragment, perform 5'Race and 3'Race according to the obtained middle fragment sequence to obtain the upstream and downstream sequences, and then design specific primers based on the spliced sequence to The full-length gene was obtained by RT-PCR amplification using the total RNA of mad tree leaves as a template, which was named JcSnRK2. Sequence analysis shows that the mRNA of the JcSnRK2 gene contains an open reading frame of 1017 bases, its nucleotide sequence is shown in SEQ ID No: 1 in the sequence listing, and its genomic DNA nucleotide sequence is shown in SEQ ID No in the sequence listing As shown in No: 2, the amino acid sequence of the polypeptide encoded by the JcSnRK2 gene is shown in SEQ ID No: 3 in the sequence listing. Bioinformatics analysis and gene expression pattern analysis showed that JcSnRK2 gene belongs to the SnRK2 family member.
本发明所述真核重组质粒,由序列表中SEQ ID No:1所示的核苷酸序列与真核表达载体构成,序列表中SEQ ID No:1所示核苷酸序列正向插入真核表达载体的Xba I和BamH I双酶切位点,所述真核表达载体为pBI121、pBI221或pBin438。The eukaryotic recombinant plasmid of the present invention is composed of the nucleotide sequence shown in SEQ ID No: 1 in the sequence table and the eukaryotic expression vector, and the nucleotide sequence shown in SEQ ID No: 1 in the sequence table is inserted into the true The Xba I and BamH I double restriction sites of the nuclear expression vector, the eukaryotic expression vector is pBI121, pBI221 or pBin438.
本发明所述植物转化体,是将上述真核重组质粒通过农杆菌侵染花序法导入拟南芥SnRK2.8缺失型植株形成,经过卡那霉素抗性筛选、GUS染色及PCR鉴定,得到JcSnRK2基因稳定表达的转基因拟南芥种子。实验表明:JcSnRK2基因的表达能够促进拟南芥SnRK2.8缺失型植株根系生长,明显提高其耐高盐及抗干旱能力,降低叶片的失水率,能够激发响应渗透胁迫的下游基因的表达。因此,本发明所述JcSnRK2基因和真核重组质粒可在提高植物抗盐、耐旱性中应用。The plant transformant of the present invention is formed by introducing the above-mentioned eukaryotic recombinant plasmid into Arabidopsis thaliana SnRK2.8-deficient plants through the method of Agrobacterium infection inflorescence, and undergoes kanamycin resistance screening, GUS staining and PCR identification to obtain Transgenic Arabidopsis seeds with stable expression of JcSnRK2 gene. Experiments have shown that the expression of JcSnRK2 gene can promote the root growth of Arabidopsis SnRK2.8-deleted plants, significantly improve its high salt tolerance and drought resistance, reduce the water loss rate of leaves, and stimulate the expression of downstream genes that respond to osmotic stress. Therefore, the JcSnRK2 gene and the eukaryotic recombinant plasmid of the present invention can be used in improving the salt resistance and drought tolerance of plants.
本发明具有以下有益效果:The present invention has the following beneficial effects:
1、本发明通过Race法克隆了一个新的麻疯树基因JcSnRK2,将该基因与真核表达载体构建真核重组质粒,为提高植物抗盐、耐旱性提供了一种新的真核重组质粒。1. The present invention has cloned a new Jatropha curcas gene JcSnRK2 by the Race method, constructs a eukaryotic recombinant plasmid with the gene and a eukaryotic expression vector, and provides a new eukaryotic recombination for improving salt resistance and drought tolerance of plants plasmid.
2、本发明通过实验证明所述真核重组质粒能够提高植物耐高盐及抗干旱的能力,能够降低叶片的失水率,能够激发响应渗透胁迫的下游基因的表达,因而可将所述重组质粒在人工抗性育种中应用,以培育出具有高盐、干旱抗性的植株。2. The present invention proves through experiments that the eukaryotic recombinant plasmid can improve the ability of plants to withstand high salt and drought, can reduce the water loss rate of leaves, and can stimulate the expression of downstream genes that respond to osmotic stress. Therefore, the recombinant Plasmids are used in artificial resistance breeding to produce plants that are resistant to high salinity and drought.
附图说明Description of drawings
图1为实施例1中麻疯树叶片总RNA的琼脂糖凝胶电泳图,图中,M泳道:分子量标记(AL2000DNAMarker,购自艾德莱公司),1泳道:麻疯树叶片总RNA。Fig. 1 is the agarose gel electrophoresis image of the total RNA of Jatropha curcas leaves in Example 1. In the figure, lane M: molecular weight marker (AL2000DNAMarker, purchased from Adelaide Company), lane 1: total RNA of Jatropha curcas leaves.
图2为实施例1中JcSnRK2中间片段的PCR扩增电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1泳道:JcSnRK2中间片段的扩增结果。Fig. 2 is the electrophoresis diagram of PCR amplification of the middle fragment of JcSnRK2 in Example 1. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), lane 1: amplification result of the middle fragment of JcSnRK2.
图3为实施例1中3'Race扩增JcSnRK2基因的下游片段电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1泳道:JcSnRK2下游片段的PCR扩增结果。3 is an electrophoresis image of the downstream fragment of the 3'Race amplified JcSnRK2 gene in Example 1. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), lane 1: PCR amplification result of the downstream fragment of JcSnRK2.
图4为实施例1中5'Race扩增JcSnRK2基因的上游片段电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1泳道:JcSnRK2上游片段的PCR扩增结果。4 is an electrophoresis image of the upstream fragment of the 5'Race amplified JcSnRK2 gene in Example 1. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), lane 1: PCR amplification result of the upstream fragment of JcSnRK2.
图5为实施例1中JcSnRK2基因ORF的PCR扩增结果电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1、2泳道:JcSnRK2基因ORF的PCR扩增结果。5 is an electrophoresis diagram of the PCR amplification result of the JcSnRK2 gene ORF in Example 1. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), and lanes 1 and 2: PCR amplification results of the JcSnRK2 gene ORF.
图6为实施例1中JcSnRK2基因ORF的菌落PCR结果电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1-10泳道:10个转化子的PCR扩增结果。6 is the electrophoresis diagram of the colony PCR result of the JcSnRK2 gene ORF in Example 1. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), and lanes 1-10: PCR amplification results of 10 transformants.
图7为实施例1中JcSnRK2基因组DNA的PCR扩增结果电泳图,图中,M泳道:分子量标记(AL15000DNAMarker,购自艾德莱公司),泳道1、2为JcSnRK2基因组DNA的PCR扩增结果。Figure 7 is the electrophoresis diagram of the PCR amplification result of JcSnRK2 genomic DNA in Example 1, in the figure, M swimming lane: molecular weight marker (AL15000DNAMarker, purchased from Adelaide Company), and swimming lanes 1 and 2 are the PCR amplification results of JcSnRK2 genomic DNA .
图8为实施例1中JcSnRK2基因组DNA的序列结构分析图。FIG. 8 is a sequence structure analysis diagram of JcSnRK2 genomic DNA in Example 1. FIG.
图9为实施例2中麻疯树与6种其它植物的SnRK2基因的系统进化树分析图。Fig. 9 is a phylogenetic tree analysis diagram of SnRK2 genes of Jatropha curcas and 6 other plants in Example 2.
图10为实施例2中麻疯树JcSnRK2与拟南芥SnRK2蛋白家族的系统进化树分析图。FIG. 10 is a phylogenetic tree analysis diagram of Jatropha curcas JcSnRK2 and Arabidopsis SnRK2 protein families in Example 2.
图11为实施例2中JcSnRK2基因编码的多肽的氨基酸序列分析。Figure 11 is the amino acid sequence analysis of the polypeptide encoded by the JcSnRK2 gene in Example 2.
图12为实施例2中JcSnRK2基因的组织特异性表达分析图。FIG. 12 is a graph showing tissue-specific expression analysis of the JcSnRK2 gene in Example 2. FIG.
图13为实施例2中JcSnRK2基因在ABA处理下的表达情况分析图。Fig. 13 is an analysis diagram of the expression of JcSnRK2 gene under ABA treatment in Example 2.
图14为实施例2中JcSnRK2基因在盐胁迫下的表达情况分析图。Fig. 14 is an analysis diagram of the expression of the JcSnRK2 gene under salt stress in Example 2.
图15为实施例2中JcSnRK2基因在干旱胁迫下的表达情况分析图。Fig. 15 is an analysis diagram of the expression of the JcSnRK2 gene under drought stress in Example 2.
图16为实施例2中JcSnRK2基因在冷胁迫下的表达情况分析图。Fig. 16 is an analysis diagram of the expression of JcSnRK2 gene under cold stress in Example 2.
图17为本发明所述真核重组质粒的一种示意图。Fig. 17 is a schematic diagram of the eukaryotic recombinant plasmid of the present invention.
图18为实施例3中双酶切电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1泳道:pBI121质粒XbaI和BamHI双酶切产物,2泳道:pBI121质粒;3泳道:pET-JcSnRK2质粒;4泳道:pET-JcSnRK2质粒的XbaI和BamHI双酶切产物。Figure 18 is the electrophoresis diagram of double enzyme digestion in Example 3. In the figure, lane M: molecular weight marker (AL2000DNAMarker), lane 1: double digestion product of pBI121 plasmid XbaI and BamHI, lane 2: plasmid pBI121; lane 3: pET-JcSnRK2 Plasmid; Lane 4: XbaI and BamHI double digestion product of pET-JcSnRK2 plasmid.
图19为实施例3中转pBI121-JcSnRK2农杆菌菌落PCR电泳图,图中,M泳道:分子量标记(AL2000DNAMarker),1-7泳道:7个转化子的扩增结果。Figure 19 is the PCR electrophoresis image of the pBI121-JcSnRK2 Agrobacterium colony transferred in Example 3. In the figure, lane M: molecular weight marker (AL2000 DNA Marker), lane 1-7: amplification results of 7 transformants.
图20为实施例3中转JcSnRK2基因拟南芥GUS染色图,其中,图A、B、C分别为幼苗、角果和花的GUS染色图。Figure 20 is the GUS staining diagram of Arabidopsis thaliana transfected with JcSnRK2 gene in Example 3, wherein Figures A, B, and C are the GUS staining diagrams of seedlings, siliques and flowers, respectively.
图21为实施例3中转JcSnRK2基因拟南芥PCR验证电泳图,图中,图(A)为转JcSnRK2基因拟南芥基因组PCR鉴定结果,图(B)为RNA的RT-PCR鉴定结果;1~6泳道:转基因拟南芥的PCR结果;7泳道:非转基因拟南芥的PCR结果。Fig. 21 is the PCR verification electrophoresis figure of JcSnRK2 gene transgenic Arabidopsis thaliana in embodiment 3, in the figure, figure (A) is the PCR identification result of JcSnRK2 gene transgenic Arabidopsis genome, and figure (B) is the RT-PCR identification result of RNA; 1 ~ Lane 6: PCR result of transgenic Arabidopsis; Lane 7: PCR result of non-transgenic Arabidopsis.
图22是实施例3中snf2.8和JK2根生长情况分析图,其中,图(A)为snf2.8和JK2于MS培养基生长1周后幼苗的根长情况图,图(B)为snf2.8和JK2于MS培养基生长1周后幼苗的根长情况统计图,图(C)为snf2.8和JK2在土中培养45天的幼苗根系生长情况图。Fig. 22 is the root growth analysis figure of snf2.8 and JK2 in embodiment 3, wherein, figure (A) is the root length condition figure of seedlings of snf2.8 and JK2 after MS culture medium grows for 1 week, figure (B) is Statistical graph of the root length of snf2.8 and JK2 seedlings grown in MS medium for 1 week. Figure (C) is a graph of root growth of snf2.8 and JK2 seedlings cultured in soil for 45 days.
图23是实施例3中snf2.8和JK2发芽率统计图。Figure 23 is a statistical diagram of the germination rates of snf2.8 and JK2 in Example 3.
图24是实施例3中snf2.8和JK2在盐胁迫下的生长状况图,其中,上排和下排分别为snf2.8和JK2在含有不同浓度NaCl的MS培养基上生长1个月后的状况图。Figure 24 is a graph showing the growth status of snf2.8 and JK2 under salt stress in Example 3, wherein the upper row and the lower row are respectively snf2.8 and JK2 grown for 1 month on MS medium containing different concentrations of NaCl status map.
图25是实施例3中snf2.8和JK2植株抗盐性分析图,其中,图A为生长30天的幼苗被450Mm NaCl溶液胁迫2周和1个月后的生长状况图,图B为生长45天的幼苗被450Mm NaCl溶液胁迫2周和1个月后的生长状况图。Fig. 25 is the salt resistance analysis figure of snf2.8 and JK2 plant among the embodiment 3, and wherein, figure A is the growth state figure after the seedling of 30 days of growth is stressed by 450Mm NaCl solution for 2 weeks and 1 month, and figure B is growth 45-day-old seedlings were subjected to 450Mm NaCl solution stress for 2 weeks and 1 month after the growth status chart.
图26是实施例3中snf2.8和JK2在干旱胁迫下的生长状况图,其中,图A为snf2.8和JK2在含不同浓度甘露醇的MS培养基上生长1个月后的概况,图B为snf2.8和JK2在含不同浓度甘露醇的MS培养基上生长1个月后的具体表型。Figure 26 is a graph of the growth status of snf2.8 and JK2 under drought stress in Example 3, wherein, Figure A is the general situation of snf2.8 and JK2 grown on MS medium containing different concentrations of mannitol for 1 month, Panel B shows the specific phenotypes of snf2.8 and JK2 grown on MS medium containing different concentrations of mannitol for 1 month.
图27是实施例3中snf2.8和JK2植株抗旱性分析图,其中,上排和下排分别为生长30天、45天的snf2.8和JK2幼苗停止供水1个月后的生长状况图。Fig. 27 is the drought resistance analysis diagram of snf2.8 and JK2 plants in Example 3, wherein, the upper row and the lower row are the growth status graphs of snf2.8 and JK2 seedlings growing for 30 days and 45 days respectively after stopping water supply for 1 month .
图28是实施例3中离体叶片失水率检测结果图。Fig. 28 is a graph showing the detection results of water loss rate of detached leaves in Example 3.
图29是实施例3中JcSnRK2及其下游基因AREB1、LEA、RD29A、RD29B在干旱胁迫下的表达水平检测结果图。Fig. 29 is a graph showing the detection results of the expression levels of JcSnRK2 and its downstream genes AREB1, LEA, RD29A, and RD29B under drought stress in Example 3.
具体实施方式Detailed ways
以下结合实施例对本发明作进一步说明。下述实施例中,凡未注明具体实验条件的,均为按照本领域技术人员熟知的常规条件,例如Sambrook等著的分子克隆:实验室手册(NewYork:Cold Spring Harbor Laboratory Press,1989),实验动物常规手册(国家实验动物规范中心,2004年11月):基本技术指南第五版(John Wiley&Sons,Inc,2005)中所述的条件及实验步骤,或按照制造厂商所建议的条件及实验步骤。The present invention will be further described below in conjunction with embodiment. In the following examples, where no specific experimental conditions are indicated, all are conventional conditions well known to those skilled in the art, such as Molecular Cloning by Sambrook et al.: Laboratory Manual (NewYork: Cold Spring Harbor Laboratory Press, 1989), The conditions and experimental procedures described in the General Manual of Laboratory Animals (National Center for Laboratory Animal Regulations, November 2004): Basic Technical Guidelines, Fifth Edition (John Wiley & Sons, Inc, 2005), or the conditions and experimental procedures recommended by the manufacturer step.
下述实施例中,麻疯树成熟种子和麻疯树花采自海南省三亚市凤凰镇水蛟村,麻疯树根、茎、叶取自用麻疯树成熟种子培育的麻疯树幼苗,培育操作:将麻疯树成熟种子播种于花盆中,在温室(30~35℃)、24h全光照条件下培养一至两个月。In the following examples, Jatropha curcas mature seeds and Jatropha curcas flowers are collected from Shuijiao Village, Fenghuang Town, Sanya City, Hainan Province, and Jatropha curcas roots, stems, and leaves are taken from Jatropha curcas seedlings cultivated with Jatropha curcas mature seeds , Cultivation operation: sow mature Jatropha curcas seeds in flowerpots, and cultivate them in a greenhouse (30-35°C) under 24h full light conditions for one to two months.
实施例1:麻疯树JcSnRK2基因的分子克隆Embodiment 1: Molecular cloning of Jatropha curcas JcSnRK2 gene
1、麻疯树叶片总RNA的提取1. Extraction of Jatropha curcas leaves total RNA
麻疯树叶片总RNA的提取使用Plant RNeasy Kit(Qiagen),具体步骤如下:The total RNA of Jatropha curcas leaves was extracted using Plant RNeasy Kit (Qiagen), and the specific steps were as follows:
1)取麻疯树叶片≤0.1g,液氮充分研磨,加入450μl RLC(预先加入β-巯基乙醇),剧烈振荡;1) Take Jatropha curcas leaves ≤0.1g, fully grind with liquid nitrogen, add 450 μl RLC (beta-mercaptoethanol was added in advance), and shake vigorously;
2)将液体移入紫色滤柱中,置于2ml收集管,室温,14,000rpm离心2min,滤液入1.5mlEP管,小心勿吸入沉淀;2) Transfer the liquid into a purple filter column, put it in a 2ml collection tube, centrifuge at 14,000rpm for 2min at room temperature, put the filtrate into a 1.5ml EP tube, be careful not to inhale the precipitate;
3)加入相当于滤液1/2体积的无水乙醇,抽打混匀;3) Add anhydrous ethanol equivalent to 1/2 volume of the filtrate, beat and mix well;
4)将样品,包括沉淀移入粉色滤柱,室温,10,000rpm离心15s,弃滤液;4) Transfer the sample, including the precipitate, into a pink filter column, centrifuge at 10,000rpm for 15s at room temperature, and discard the filtrate;
5)加入700μl RW1buffer,室温,10,000rpm离心15s,清洗过柱;5) Add 700μl RW1buffer, centrifuge at 10,000rpm for 15s at room temperature, and wash the column;
6)加入500μl RPE,室温,10,000rpm离心15s,清洗过柱,重复该操作一次;6) Add 500μl RPE, centrifuge at 10,000rpm for 15s at room temperature, wash the column, and repeat this operation once;
7)室温,14,000rpm离心1min,弃滤液;7) Centrifuge at 14,000rpm for 1min at room temperature, discard the filtrate;
8)将滤柱放入1.5ml收集管中,加入30~50μl RNase-free水,室温,10,000rpm离心1min即得麻疯树叶片总RNA。8) Put the filter column into a 1.5ml collection tube, add 30-50μl RNase-free water, and centrifuge at 10,000rpm for 1min at room temperature to obtain the total RNA of Jatropha curcas leaves.
其琼脂糖凝胶电泳图如图1所示。Its agarose gel electrophoresis picture is shown in Figure 1.
2、JcSnRK2基因中间片段的获得2. Obtaining the middle fragment of JcSnRK2 gene
2.1Reverse Transcriptase M-MLV合成cDNA第一链2.1Reverse Transcriptase M-MLV synthesizes the first strand of cDNA
按照反转录酶M-MLV(TaKaRa)的操作说明进行,以步骤1所得麻疯树叶片总RNA为模板,Oligo(dT)18为引物。According to the operating instructions of reverse transcriptase M-MLV (TaKaRa), the total RNA of Jatropha curcas leaves obtained in step 1 was used as a template, and Oligo(dT) 18 was used as a primer.
在RNase-free的0.2ml PCR管中加入Add to RNase-free 0.2ml PCR tube
麻疯树叶片总RNA 3μl(约500ng)Jatropha curcas leaves total RNA 3μl (about 500ng)
Oligo(dT)18(50μM) 1μlOligo(dT) 18 (50μM) 1μl
用RNase-free ddH2O将体积补充至6μl。Make up the volume to 6 μl with RNase-free ddH 2 O.
混匀后,70℃保温10min后迅速在冰上急冷2min以上,然后短暂离心使管中溶液集于EP管底部。在冰上依次加入以下试剂:5×M-MLV Buffer2μl;dNTP(10μM)0.5μl;RNaseInhibitor0.3μl;RTase M-MLV0.5μl;RNase-free ddH2O0.7μl。混合均匀后再次放入PCR仪42℃反应1h,70℃反应10min,存于-20℃备用。After mixing, keep warm at 70°C for 10 minutes, then quickly cool on ice for more than 2 minutes, and then centrifuge briefly to collect the solution in the tube at the bottom of the EP tube. Add the following reagents sequentially on ice: 5×M-MLV Buffer 2 μl; dNTP (10 μM) 0.5 μl; RNase Inhibitor 0.3 μl; RTase M-MLV 0.5 μl; RNase-free ddH 2 O 0.7 μl. After mixing evenly, put it into the PCR instrument again to react at 42°C for 1h, and at 70°C for 10min, and store it at -20°C for later use.
引物Oligo(dT)18序列为:5′-GCTGTCAACGATACGCTACGTAACGGCATGACAGTG(T)18-3′The sequence of primer Oligo(dT) 18 is: 5′-GCTGTCAACGATACGCTACGTAACGGCATGACAGTG(T) 18 -3′
2.2PCR2.2PCR
于冰上在一个0.2ml的EP管中加入以下组分:Add the following components to a 0.2ml EP tube on ice:
循环条件:95℃3min(预变性);94℃30s(变性),55℃30s(复性),72℃1min(延伸),所述变性-复性-延伸35个循环;72℃10min(终延伸)。Cycling conditions: 95°C for 3min (pre-denaturation); 94°C for 30s (denaturation), 55°C for 30s (refolding), 72°C for 1min (extension), the denaturation-refolding-extension cycle is 35 cycles; 72°C for 10min (final extend).
引物序列如下:The primer sequences are as follows:
P1:5′-GAGATNATNAAYCATAGRTCATTGA-3′P1:5′-GAGATNATNAAYCATAGRTCATTGA-3′
P2:5′-GATCYTCAAAWGGATAWGCDCCAA-3′P2: 5′-GATCYTCAAAWGGATAWGCDCCAA-3′
简并碱基代码:R(A,G),Y(C,T),M(A,C),K(G,T),S(G,C),W(A,T),H(A,T,C),B(G,T,C),V(G,A,C),D(G,A,T),N(A,T,G,C)。Degenerate base codes: R(A,G),Y(C,T),M(A,C),K(G,T),S(G,C),W(A,T),H( A, T, C), B (G, T, C), V (G, A, C), D (G, A, T), N (A, T, G, C).
2.3电泳分离、胶回收目的条带2.3 Electrophoresis separation, gel recovery target band
PCR产物经过1%琼脂糖凝胶电泳后,切下目的条带,采用DNA柱式胶回收试剂盒(TIANGEN)回收片段,具体步骤如下:After the PCR product was subjected to 1% agarose gel electrophoresis, the target band was excised, and the fragment was recovered using the DNA Column Gel Recovery Kit (TIANGEN). The specific steps are as follows:
1)向吸附柱CA2中加入500μl BL,12,000rpm离心1min,弃滤液;1) Add 500μl BL to the adsorption column CA2, centrifuge at 12,000rpm for 1min, and discard the filtrate;
2)切下目的条带放入干净EP管,称重;2) Cut off the target band and put it into a clean EP tube, and weigh it;
3)加入约500μl PN溶胶,于50℃水浴溶胶10min或者室温溶胶;3) Add about 500 μl PN sol, and sol in a water bath at 50°C for 10 minutes or sol at room temperature;
4)吸取溶液(<700μl)入CA2柱,室温放置2min后,12,000rpm离心30~60s,弃滤液;4) Pipette the solution (<700μl) into the CA2 column, place it at room temperature for 2min, centrifuge at 12,000rpm for 30-60s, and discard the filtrate;
5)向CA2柱中加入700μl PW,12,000rpm离心30~60s,弃滤液;5) Add 700μl PW to the CA2 column, centrifuge at 12,000rpm for 30-60s, and discard the filtrate;
6)向CA2柱中加入500μl PW,12,000rpm离心30~60s,弃滤液;6) Add 500μl PW to the CA2 column, centrifuge at 12,000rpm for 30-60s, and discard the filtrate;
7)12,000rpm离心2min,室温放置数分钟以彻底晾干CA2柱;7) Centrifuge at 12,000rpm for 2 minutes, and place at room temperature for several minutes to dry the CA2 column completely;
8)CA2柱放入新的离心管,悬空滴加约35μl EB,室温放置2min,12,000rpm离心2min。8) Put the CA2 column into a new centrifuge tube, add about 35 μl EB dropwise in the air, leave it at room temperature for 2 minutes, and centrifuge at 12,000 rpm for 2 minutes.
2.4载体的连接与转化2.4 Ligation and transformation of vector
1)胶回收片段与pMD19-T载体(TaKaRa)进行连接,反应体系如下:1) The fragment recovered from the gel is connected to the pMD19-T vector (TaKaRa), and the reaction system is as follows:
胶回收片段 6μlGel Recovery Fragment 6μl
pMD19-T 1μlpMD19-T 1μl
Solution Ⅰ 3μlSolution Ⅰ 3μl
混匀后于16℃连接过夜。After mixing, connect overnight at 16°C.
2)大肠杆菌感受态的制备2) Preparation of competent E. coli
大肠杆菌(Escherichia coli)DH5α:购自TIANGEN公司,采用刘进元的CaCl2法制备大肠杆菌感受态细胞,步骤如下:Escherichia coli (Escherichia coli) DH5α: purchased from TIANGEN company, adopting Liu Jinyuan's CaCl method to prepare Escherichia coli competent cells, the steps are as follows:
从37℃过夜培养的LB平板上挑取大肠杆菌Top10单菌落,接种于5ml LB液体培养基中,37℃、220rpm振荡培养过夜;取100μl过夜培养物转移到50ml LB液体培养基中,37℃、220rpm振荡培养2-4小时,直至菌液的OD600为0.5。将培养液转移到两只预冷的50ml无菌离心管中,冰浴10min,然后4℃、5,000rpm离心5min,弃上清,沉淀用0.1mol/l无菌CaCl2重悬,冰浴放置30min。于4℃、5,000rpm离心5min,弃上清,沉淀用0.1mol/l无菌CaCl2重悬。再加入500μl灭菌甘油,混匀后,分装成50μl每管,液氮速冻后置-70℃冰箱保存备用。Pick a single colony of Escherichia coli Top10 from the LB plate cultivated overnight at 37°C, inoculate it in 5ml LB liquid medium, and cultivate overnight at 37°C with shaking at 220rpm; transfer 100μl of the overnight culture to 50ml LB liquid medium, and incubate , 220rpm shaking culture for 2-4 hours, until the OD 600 of the bacterial solution is 0.5. Transfer the culture medium to two pre-cooled 50ml sterile centrifuge tubes, put them in an ice bath for 10 minutes, then centrifuge at 5,000 rpm at 4°C for 5 minutes, discard the supernatant, resuspend the pellet with 0.1mol/l sterile CaCl 2 , and place in an ice bath 30min. Centrifuge at 4°C and 5,000 rpm for 5 min, discard the supernatant, and resuspend the pellet with 0.1 mol/l sterile CaCl 2 . Then add 500 μl of sterilized glycerin, mix well, aliquot into 50 μl tubes, freeze in liquid nitrogen and store in -70°C refrigerator for later use.
3)大肠杆菌的转化和鉴定3) Transformation and identification of Escherichia coli
从超低温冰箱中取出感受态,冰浴冻融。将上述10μl连接产物加入感受态中,用枪混匀,冰上放置30min,然后迅速置于42℃水浴锅中热激45~90s,再冰上放置1~3min。于超净工作台加入1ml液体LB培养基,37℃、220rpm摇菌1h。室温下,4,000rpm离心2min,弃上清。用50μl液体LB培养基重悬菌体沉淀,然后均匀涂布在LB平板上(加入终浓度为50μg/L的氨苄青霉素作为筛选),37℃倒置培养过夜。挑出单菌落进行菌落PCR并放入700μl液体LB(Amp+)培养基中摇菌2~3h,挑选菌落PCR成功的菌液送往北京华大基因技术公司测序,所得序列长度为466bp(图2)。Take out the competent cells from the ultra-low temperature freezer, freeze and thaw in an ice bath. Add 10 μl of the ligation product above to the competent state, mix with a gun, place on ice for 30 minutes, then quickly place in a water bath at 42°C for heat shock for 45-90 seconds, and place on ice for 1-3 minutes. Add 1ml of liquid LB medium to the ultra-clean bench, and shake the bacteria at 37°C and 220rpm for 1h. Centrifuge at 4,000rpm for 2min at room temperature and discard the supernatant. The bacterial pellet was resuspended in 50 μl of liquid LB medium, and then evenly spread on LB plates (adding ampicillin at a final concentration of 50 μg/L as a screening), and cultured upside down at 37° C. overnight. Pick out a single colony for colony PCR and put it into 700 μl liquid LB (Amp+) medium to shake the bacteria for 2 to 3 hours. Select the bacterial liquid with successful colony PCR and send it to Beijing Huada Gene Technology Company for sequencing. The length of the obtained sequence is 466bp (Figure 2 ).
3、JcSnRK2基因下游片段的获得3. Obtaining the downstream fragment of JcSnRK2 gene
根据中间片段序列设计两个正向引物3P1和3P2,以及两个Oligo(dT)18互补引物AP1、AP2作为反向引物。以反转录产物为模板(cDNA第一链的合成如本实施例中的2.1),用引物3P1和AP1进行第一轮PCR扩增。然后以第一轮PCR产物为模板,用引物3P2和AP2进行第二轮PCR扩增。反应体系如实施例1的2.2,循环条件:95℃预变性3min,然后35个循环(94℃30s,58℃30s,72℃1min),72℃延伸10min。Two forward primers 3P1 and 3P2 were designed according to the middle fragment sequence, and two Oligo(dT) 18 complementary primers AP1 and AP2 were used as reverse primers. Using the reverse transcription product as a template (synthesis of the first strand of cDNA is as described in 2.1 in this example), the first round of PCR amplification was performed with primers 3P1 and AP1. Then, using the first-round PCR product as a template, the second-round PCR amplification was performed with primers 3P2 and AP2. The reaction system is as in 2.2 of Example 1, cycle conditions: pre-denaturation at 95°C for 3 minutes, then 35 cycles (94°C for 30s, 58°C for 30s, 72°C for 1min), and extension at 72°C for 10min.
引物序列如下:The primer sequences are as follows:
3P1:5′-CTACAGTGGGAACACCAGCCTAT-3′3P1: 5′-CTACAGTGGGAACACCAGCCTAT-3′
3P2:5′-AGATGTTTGGTCTTGTGGGGTTA-3′3P2: 5′-AGATGTTTGGTCTTGTGGGGTTA-3′
AP1:5′-GTCAACGATACGCTACGTAACG-3′AP1: 5′-GTCAACGATACGCTACGTAACG-3′
AP2:5′-TACGTAACGGCATGACAGTG-3′AP2: 5′-TACGTAACGGCATGACAGTG-3′
之后步骤如实施例1的2.3和2.4,测序得到长度为625bp的基因下游片段(见图3)。The subsequent steps were as in 2.3 and 2.4 of Example 1, and the downstream fragment of the gene with a length of 625 bp was obtained by sequencing (see Figure 3).
4、JcSnRK2基因上游片段的获得4. Obtaining the upstream fragment of JcSnRK2 gene
4.1RT4.1RT
以麻疯树叶片总RNA为模板,用5PR为反转录引物,实验步骤如本实施例中的2.1,引物序列如下:With Jatropha curcas leaf total RNA as template, 5PR is used as reverse transcription primer, experimental procedure is as 2.1 in the present embodiment, and primer sequence is as follows:
5PR:5′-GTGTTCCCACTGTAGACTTAGGTTG-3′5PR: 5′-GTGTTCCCACTGTAGACTTAGGTTG-3′
4.2去除多余RNA4.2 Removal of excess RNA
反转录产物加入2μl RNase于37℃水浴处理30min。The reverse transcription product was treated with 2 μl RNase in a water bath at 37°C for 30 minutes.
4.3纯化cDNA4.3 Purification of cDNA
所用cDNA纯化试剂盒为DNA Fragment Purification Kit(TaKaRa),具体实验步骤如下:The cDNA purification kit used is DNA Fragment Purification Kit (TaKaRa), and the specific experimental steps are as follows:
1)向反应液中加入3倍量的DB Buffer(如果需加入的DB Buffer不足100μl时应加入100μl),然后充分混匀;1) Add 3 times the amount of DB Buffer to the reaction solution (if the amount of DB Buffer to be added is less than 100 μl, add 100 μl), then mix well;
2)将Spin Column安置于Collection Tube上;2) Place the Spin Column on the Collection Tube;
3)将上述步骤1)的溶液转移至Spin Column中,12,000rpm离心1min,弃滤液;如将滤液再加入Spin Column中离心一次,可提高DNA的回收率;3) Transfer the solution of the above step 1) to the Spin Column, centrifuge at 12,000rpm for 1min, and discard the filtrate; if the filtrate is added to the Spin Column and centrifuged once, the recovery rate of DNA can be improved;
4)将500μl Rinse A加入Spin Column中,12,000rpm离心30s,弃滤液;4) Add 500μl Rinse A to the Spin Column, centrifuge at 12,000rpm for 30s, and discard the filtrate;
5)将700μl Rinse B(确认已经加入乙醇)加入Spin Column中,12,000rpm离心30s,弃滤液;重复该操作一次;5) Add 700μl Rinse B (confirm that ethanol has been added) into the Spin Column, centrifuge at 12,000rpm for 30s, discard the filtrate; repeat this operation once;
6)将Spin Column置于新的1.5ml EP管上,在Spin Column膜的中央处加入25~30μl预热至60℃的灭菌水或Elution Buffer,室温静置1min;6) Put the Spin Column on a new 1.5ml EP tube, add 25-30μl of sterilized water or Elution Buffer preheated to 60°C to the center of the Spin Column membrane, and let stand at room temperature for 1min;
7)12,000rpm离心1min洗脱DNA。7) Centrifuge at 12,000rpm for 1min to elute DNA.
4.3cDNA加尾4.3 cDNA tailing
在一个0.2ml的EP管中加入以下组分:Add the following components to a 0.2ml EP tube:
于94℃变性2min后冰浴3min,短暂离心后加入1μl TdT末端转移酶,轻轻混匀后放入PCR仪,37℃30min,65℃10min。After denaturation at 94°C for 2 minutes, ice bath for 3 minutes, after brief centrifugation, add 1 μl TdT terminal transferase, mix gently and put into PCR machine, 37°C for 30 minutes, 65°C for 10 minutes.
4.4巢氏PCR:第一轮PCR以加尾后的cDNA为模板,以AP1和5P1为引物。第二轮PCR用第一轮PCR的产物为模板,以AP2和5P2为引物。反应体系如实施例1的2.2,循环条件:95℃预变性3min,然后35个循环(94℃30s,57℃30s,72℃40s),72℃延伸7min。引物序列如下:4.4 Nested PCR: The first round of PCR uses the tailed cDNA as a template and AP1 and 5P1 as primers. The second round of PCR used the product of the first round of PCR as a template and AP2 and 5P2 as primers. The reaction system is as in 2.2 of Example 1, cycle conditions: pre-denaturation at 95°C for 3 minutes, followed by 35 cycles (94°C for 30s, 57°C for 30s, 72°C for 40s), and extension at 72°C for 7 minutes. The primer sequences are as follows:
5P1:5′-TAGTTGTTGAAAGAAAAATCGTGCC-3′5P1: 5′-TAGTTGTTGAAAGAAAAATCGTGCC-3′
5P2:5′-ACTATGGCTAAATGAGTTGGTGTGA-3′5P2: 5′-ACTATGGCTAAATGAGTTGGTGTGA-3′
之后步骤如实施例1的2.3和2.4,测序得到长度为295bp的基因上游片段(图4)。Subsequent steps were as in 2.3 and 2.4 of Example 1, and the upstream fragment of the gene with a length of 295 bp was obtained by sequencing (Figure 4).
5、JcSnRK2基因开放阅读框(ORF)的获得5. Acquisition of the open reading frame (ORF) of the JcSnRK2 gene
根据所获得的中间片段、3'片段和5'片段拼接出JcSnRK2基因全长cDNA,据此设计扩增ORF的特异引物SP1和SP2,以麻疯树叶片的cDNA为模板,于冰上在一个0.2ml的EP管中加入以下组分:According to the obtained middle fragment, 3' fragment and 5' fragment, the full-length cDNA of JcSnRK2 gene was spliced, and the specific primers SP1 and SP2 for amplifying the ORF were designed accordingly. Add the following components to a 0.2ml EP tube:
以2μl cDNA为模板进行扩增,循环条件为:95℃3min,35个循环(94℃30s、57℃30s、72℃1min),72℃10min。Amplify with 2 μl cDNA as template, cycle conditions are: 95°C for 3 minutes, 35 cycles (94°C for 30s, 57°C for 30s, 72°C for 1min), 72°C for 10min.
经测序得到1017bp的ORF全长(图5和图6)。引物序列如下:The full-length ORF of 1017bp was obtained by sequencing (Figure 5 and Figure 6). The primer sequences are as follows:
SP1:5′-ATGGAGCGTTATGAGATATTGAGAG-3′SP1: 5′-ATGGAGCGTTATGAGATATTGAGAG-3′
SP2:5′-TCACAATGCACAAACAAAATCACCAC-3′SP2: 5′-TCACAATGCACAAAACAAAATCACCAC-3′
6、JcSnRK2基因组DNA的获得6. Obtaining JcSnRK2 Genomic DNA
6.1麻疯树叶片DNA的提取6.1 Extraction of DNA from leaves of Jatropha curcas
使用Plant Genomic DNA Kit(TIANGEN)提取麻疯树叶片的DNA,具体方法如下:Use the Plant Genomic DNA Kit (TIANGEN) to extract the DNA of Jatropha curcas leaves, the specific method is as follows:
1)取0.1g麻疯树叶片,用液氮充分研磨;1) Take 0.1g of Jatropha curcas leaves and grind them fully with liquid nitrogen;
2)将研磨好的麻疯树叶片粉末迅速转移到预先装有700μl65℃预热缓冲液GP1的离心管中(实验前在预热的GP1中加入巯基乙醇,终浓度为0.1%),迅速颠倒混匀后,将离心管放在65℃水浴20min,其间颠倒离心管数次以混合样品;2) Quickly transfer the ground Jatropha curcas leaf powder to a centrifuge tube pre-filled with 700 μl 65°C preheating buffer GP1 (add mercaptoethanol to the preheated GP1 before the experiment, with a final concentration of 0.1%), and quickly invert After mixing, place the centrifuge tube in a 65°C water bath for 20 minutes, during which time the centrifuge tube was inverted several times to mix the sample;
3)加入700μl氯仿,充分混匀,12,000rpm离心5min;3) Add 700μl chloroform, mix thoroughly, and centrifuge at 12,000rpm for 5min;
4)将上层水相转入一个新的离心管中,加入700μl缓冲液GP2,充分混匀;4) Transfer the upper aqueous phase into a new centrifuge tube, add 700 μl buffer GP2, and mix well;
5)将混匀的液体转入吸附柱CB3中,12,000rpm离心30s,弃废液;5) Transfer the mixed liquid into the adsorption column CB3, centrifuge at 12,000rpm for 30s, and discard the waste liquid;
6)向吸附柱CB3中加入500μl缓冲液GD,12,000rpm离心30s,弃废液;6) Add 500μl buffer GD to the adsorption column CB3, centrifuge at 12,000rpm for 30s, and discard the waste liquid;
7)向吸附柱CB3中加入600μl漂洗液PW,12,000rpm离心30s,弃废液;7) Add 600μl rinse solution PW to the adsorption column CB3, centrifuge at 12,000rpm for 30s, and discard the waste solution;
8)重复步骤7)一次;8) Repeat step 7) once;
9)将吸附柱CB3放回收集管中,12,000rpm离心2min,弃废液;将吸附柱CB3置于室温放置数分钟,以彻底晾干吸附材料中残留的漂洗液;9) Put the adsorption column CB3 back into the collection tube, centrifuge at 12,000rpm for 2 minutes, and discard the waste liquid; place the adsorption column CB3 at room temperature for several minutes to completely dry the residual rinse solution in the adsorption material;
10)将吸附柱CB3转入一个干净的离心管中,向吸附膜的中间部位悬空滴加50~200μl洗脱缓冲液TE,室温放置2~5min,12,000rpm离心2min,将溶液收集到离心管中。10) Transfer the adsorption column CB3 into a clean centrifuge tube, add 50-200 μl of elution buffer TE dropwise to the middle of the adsorption membrane, leave it at room temperature for 2-5 minutes, centrifuge at 12,000 rpm for 2 minutes, and collect the solution into the centrifuge tube middle.
6.2PCR6.2PCR
以麻疯树叶片DNA为模板,SP1、SP2为引物,使用long Taq酶(艾德莱公司)扩增JcSnRK2的基因组DNA。具体体系如下:Using Jatropha curcas leaf DNA as a template and SP1 and SP2 as primers, the genomic DNA of JcSnRK2 was amplified using long Taq enzyme (Adelaide). The specific system is as follows:
循环条件为:94℃2min,10个循环(94℃15s、57℃30s、68℃5min),30个循环(94℃15s、57℃30s、68℃5min(自动延长15s/cycle)),68℃10min。Cycle conditions: 94°C for 2min, 10 cycles (94°C for 15s, 57°C for 30s, 68°C for 5min), 30 cycles (94°C for 15s, 57°C for 30s, 68°C for 5min (automatic extension 15s/cycle)), 68°C ℃ 10min.
6.3序列分析6.3 Sequence Analysis
如本实施例中的2.3和2.4,经过胶回收、pMD19-T连接、转化大肠杆菌、菌落PCR、测序,得到长度为2578bp的JcSnRK2基因组DNA片段(图7),经过序列分析,该基因组DNA包含1017bp的外显子区域和1561bp的内含子区域,如图8所示,其中10个外显子的长度分别是120、76、102、52、92、94、104、101、18和218bp,9个内含子的长度为227、526、128、291、89、109、97、94和40bp,这种基因组DNA含有多个内含子的情况与其它的SnRK2家族成员类似。As in 2.3 and 2.4 in this example, after gel recovery, pMD19-T ligation, transformation of Escherichia coli, colony PCR, and sequencing, a JcSnRK2 genomic DNA fragment with a length of 2578bp was obtained (Figure 7). After sequence analysis, the genomic DNA contained The exon region of 1017bp and the intron region of 1561bp, as shown in Figure 8, the lengths of the 10 exons are 120, 76, 102, 52, 92, 94, 104, 101, 18 and 218bp respectively, The lengths of the nine introns are 227, 526, 128, 291, 89, 109, 97, 94 and 40 bp, and the genomic DNA contains multiple introns similar to other SnRK2 family members.
实施例2:麻疯树JcSnRK2基因的分析Embodiment 2: Analysis of Jatropha curcas JcSnRK2 gene
1、生物信息学分析1. Bioinformatics analysis
使用软件DNAMAN、Primer Premier5.0及NCBI上的Blast程序对JcSnRK2序列(序列表中SEQ ID No:1)和JcSnRK2基因编码的多肽的氨基酸序列(序列表中SEQ ID No:3)进行同源性分析和保守区域分析。Use the software DNAMAN, Primer Premier5.0 and the Blast program on NCBI to perform homology on the JcSnRK2 sequence (SEQ ID No: 1 in the sequence listing) and the amino acid sequence of the polypeptide encoded by the JcSnRK2 gene (SEQ ID No: 3 in the sequence listing) analysis and conserved region analysis.
2、荧光定量PCR检测JcSnRK2基因表达模式2. Real-time quantitative PCR detection of JcSnRK2 gene expression pattern
2.1荧光定量PCR引物设计2.1 Fluorescence quantitative PCR primer design
根据克隆出的JcSnRK2cDNA全长序列设计了QP1和QP2作为检测JcSnRK2基因表达水平的荧光定量PCR引物,选取actin作为内参基因,引物为ActP1和ActP2。引物序列如下:According to the cloned full-length sequence of JcSnRK2 cDNA, QP1 and QP2 were designed as fluorescent quantitative PCR primers to detect the expression level of JcSnRK2 gene, actin was selected as the internal reference gene, and the primers were ActP1 and ActP2. The primer sequences are as follows:
QP1:5′-TGAAGATGAGGCACGATT-3′QP1: 5′-TGAAGATGAGGCACGATT-3′
QP2:5′-CCACTGTAGACTTAGGTTGA-3′QP2: 5′-CCACTGTAGACTTAGGTTGA-3′
ActP1:5′-TGGAGCAGAGAGATTCCGATG-3′ActP1: 5′-TGGAGCAGAGAGATTCCGATG-3′
ActP2:5′-CACCACTGAGCACAATGTTACC-3′ActP2: 5′-CACCACTGAGCACAATGTTACC-3′
2.2准备不同胁迫条件下基因表达模式分析所用材料2.2 Preparation of materials for analysis of gene expression patterns under different stress conditions
ABA(脱落酸)处理:将麻疯树幼苗洗干净土后,放入1mM ABA溶液中培养,分别在0h、1h、3h、6h、12h和24h取叶片。ABA (abscisic acid) treatment: After washing the soil of Jatropha curcas seedlings, put them into 1mM ABA solution for cultivation, and take leaves at 0h, 1h, 3h, 6h, 12h and 24h respectively.
盐胁迫:将麻疯树幼苗洗干净土后,放入250mM NaCl溶液中培养,分别在0h、1h、3h、6h、12h、24h和48h取叶片。Salt stress: Jatropha curcas seedlings were washed clean soil, cultured in 250mM NaCl solution, and leaves were taken at 0h, 1h, 3h, 6h, 12h, 24h and 48h.
干旱胁迫:将麻疯树幼苗洗干净土后,放入质量分数为20%PEG6000溶液中培养,分别在0h、1h、3h、6h、12h、24h和48h取叶片。Drought stress: After washing the soil of Jatropha curcas seedlings, they were cultured in a solution with a mass fraction of 20% PEG6000, and the leaves were collected at 0h, 1h, 3h, 6h, 12h, 24h and 48h.
冷胁迫:将盆栽麻疯树幼苗放在4℃中培养,分别在0h、1h、3h、6h、12h、24h和48h取叶片。Cold stress: the potted Jatropha curcas seedlings were cultured at 4°C, and the leaves were taken at 0h, 1h, 3h, 6h, 12h, 24h and 48h.
2.3RT2.3RT
按照实施例1的麻疯树叶片总RNA的提取方法,从麻疯树种子、花及麻疯树幼苗的根、茎、叶和2.2不同胁迫条件下的麻疯树叶片中分别提取它们的总RNA,所得总RNA使用BIO-RAD公司的iScriptTM cDNA Synthesis Kit进行反转录。用硅化枪头在0.2ml的RNase-free硅化EP管中加入以下组分:According to the extraction method of the Jatropha curcas leaf total RNA of embodiment 1, extract their total RNA respectively from the root, stem, leaf of Jatropha curcas seedling, flower and Jatropha curcas seedling and 2.2 different stress conditions For RNA, the obtained total RNA was reverse-transcribed using iScript TM cDNA Synthesis Kit from BIO-RAD Company. Add the following components to a 0.2ml RNase-free siliconized EP tube with a siliconized pipette tip:
在PCR仪上按以下程序进行反应:25℃5min,42℃30min,85℃5min。所得cDNA用Nuclease-free water稀释10倍,-20℃保存备用。The reaction was performed on the PCR instrument according to the following program: 5 min at 25°C, 30 min at 42°C, and 5 min at 85°C. The resulting cDNA was diluted 10 times with Nuclease-free water and stored at -20°C for future use.
2.4荧光定量PCR2.4 Fluorescence quantitative PCR
荧光定量PCR所用试剂盒为BIO-RAD公司的SsoFastTM EvaGreenSuperemix,PCR反应在IQ5PCR仪(BIO-RAD公司)上进行,用硅化枪头在0.2ml的硅化EP管中加入以下组分:The kit used for fluorescent quantitative PCR is SsoFast TM EvaGreen from BIO-RAD Superemix, PCR reaction was carried out on the IQ5 PCR instrument (BIO-RAD company), and the following components were added to a 0.2ml siliconized EP tube with a siliconized pipette tip:
反应程序为95℃变性2min后,进入95℃10s,60℃1min的45个循环,最后从65℃到95℃进行溶解曲线分析,去除引物二聚体和其他非特异性扩增。每个样品均重复三次以避免加样误差,实验数据利用iQ5-Cycler软件进行分析,分析方法为ΔΔCt法。The reaction program was denaturation at 95°C for 2 min, followed by 45 cycles of 95°C for 10 s and 60°C for 1 min, and finally melting curve analysis from 65°C to 95°C to remove primer dimers and other non-specific amplification. Each sample was repeated three times to avoid sampling errors. The experimental data was analyzed using iQ5-Cycler software, and the analysis method was the ΔΔCt method.
3、结果3. Results
3.1同源性分析3.1 Homology analysis
以序列表中SEQ ID No:1所述JcSnRK2基因序列编码的多肽的氨基酸序列(序列表中SEQ ID No:3)为询问序列,在NCBI上进行Blastp,发现其与蒺藜苜蓿(Medicago truncatula,XM_003615109)和拟南芥(Arabidopsis thaliana,NM_120165)的SnRK2基因同源性最高,分别为88%和85%,与水稻(Oryza sativa,AB125302.1)、番茄(Solanum lycopersicum,NM_001247424.1)和玉米(Zea Mays,NM_001154177)的同源性为78%、78%和77%。根据这6种植物SnRK2氨基酸序列同源性,用DNAMAN软件绘制进化树,结果与NCBI Blastp略有不同,由图9看出,与JcSnRK2亲缘关系最近的是番茄,其次是水稻、玉米和小麦。Taking the amino acid sequence of the polypeptide encoded by the JcSnRK2 gene sequence described in SEQ ID No: 1 in the sequence listing (SEQ ID No: 3 in the sequence listing) as the query sequence, Blastp was performed on NCBI, and it was found that it was similar to Medicago truncatula (Medicago truncatula, XM_003615109 ) and Arabidopsis thaliana (Arabidopsis thaliana, NM_120165) have the highest homology of SnRK2 gene, which are 88% and 85%, respectively. Zea Mays, NM_001154177) were 78%, 78% and 77% homologous. According to the amino acid sequence homology of SnRK2 in these six plants, the phylogenetic tree was drawn with DNAMAN software, and the result was slightly different from that of NCBI Blastp. It can be seen from Figure 9 that tomato is the closest relative to JcSnRK2, followed by rice, corn and wheat.
目前对于SnRK2蛋白功能研究的比较深入的是拟南芥,其10个家族成员中除SnRK2.9外,均可被NaCl和干旱胁迫诱导表达,其中SnRK2.2、SnRK2.3、SnRK2.6、SnRK2.7和SnRK2.8受ABA激活,SnRK2.8的过量表达提高了植物在水分缺乏时的抗寒性。为推测JcSnRK2蛋白的生物功能,将它与拟南芥的10个SnRK2蛋白家族成员进行氨基酸序列同源性分析,它们在NCBI上的登记号分别为SnRK2.1(At5g08590),SnRK2.2(At3g50500),SnRK2.3(At5g66880),SnRK2.4(At1g10940),SnRK2.5(At5g63650),SnRK2.6(At4g33950),SnRK2.7(At4g40010),SnRK2.8(At1g78290),SnRK2.9(At2g23030),SnRK2.10(At1g60940),利用DNAMAN软件绘制系统进化树,如图10所示,从图10可以看出,本发明所述JcSnRK2基因编码的多肽的氨基酸序列与拟南芥当中ABA激发型的家族成员SnRK2.2、SnRK2.3、SnRK2.6、SnRK2.7和SnRK2.8同源关系较近,因此初步推测JcSnRK2基因可能受到ABA激活并参与麻疯树抗盐抗旱的生物应答活动当中。At present, Arabidopsis thaliana is the most in-depth research on the function of SnRK2 protein. Among its 10 family members, except SnRK2.9, all of them can be induced by NaCl and drought stress. SnRK2.7 and SnRK2.8 are activated by ABA, and the overexpression of SnRK2.8 improves the cold resistance of plants under water shortage. In order to deduce the biological function of JcSnRK2 protein, amino acid sequence homology analysis was carried out between it and 10 members of SnRK2 protein family in Arabidopsis, and their registration numbers on NCBI were SnRK2. ), SnRK2.3(At5g66880), SnRK2.4(At1g10940), SnRK2.5(At5g63650), SnRK2.6(At4g33950), SnRK2.7(At4g40010), SnRK2.8(At1g78290), SnRK2.9(At0)2303 , SnRK2.10 (At1g60940), using DNAMAN software to draw a phylogenetic tree, as shown in Figure 10, as can be seen from Figure 10, the amino acid sequence of the polypeptide encoded by the JcSnRK2 gene of the present invention is the same as that of the ABA-induced type in Arabidopsis The family members SnRK2.2, SnRK2.3, SnRK2.6, SnRK2.7 and SnRK2.8 have a close homology relationship, so it is preliminarily speculated that the JcSnRK2 gene may be activated by ABA and participate in the biological response activities of Jatropha curcas against salt and drought.
3.2保守区域分析3.2 Conserved area analysis
通过与SnRK2.2、SnRK2.3、SnRK2.6、SnRK2.7和SnRK2.8比对,如图11所示,本发明所述JcSnRK2基因编码的氨基酸序列包含SnRK2家族共有的三个保守区域,即ATP bindingdomain(GXGXXGX)、activation loop(DFGYSKSSVLHSQPKSTVGTPAYIAPE)和SnRK Box,以及ABA激发型成员特有的ABA Box,其中activation loop是蛋白激酶磷酸化的靶位点,图中带*标记的Ser和Thr残基对SnRK2活性具有至关重要的作用。另外,SnRK2蛋白家族在C-端有一个富含谷氨酸或天门冬氨酸的酸性补丁(D/E),以此为根据将SnRK2分为SnRK2a和SnRK2b两个组,其中SnRK2a的酸性补丁中富含天冬氨酸D,SnRK2b则富含谷氨酸E,实施例1克隆出的JcSnRK2有酸性补丁且以天冬氨酸为主,比例约为53%,所以归类为SnRK2a亚家族。By comparing with SnRK2.2, SnRK2.3, SnRK2.6, SnRK2.7 and SnRK2.8, as shown in Figure 11, the amino acid sequence encoded by the JcSnRK2 gene of the present invention contains three conserved regions shared by the SnRK2 family, That is, ATP bindingdomain (GXGXXGX), activation loop (DFGYSKSSVLHSQPKSTVGTPAYIAPE) and SnRK Box, and the ABA Box unique to ABA-stimulating members, where the activation loop is the target site of protein kinase phosphorylation, and the Ser and Thr residues marked with * in the figure Plays a crucial role in the activity of SnRK2. In addition, the SnRK2 protein family has an acidic patch (D/E) rich in glutamic acid or aspartic acid at the C-terminus. Based on this, SnRK2 is divided into two groups, SnRK2a and SnRK2b. The acidic patch of SnRK2a JcSnRK2 is rich in aspartic acid D, and SnRK2b is rich in glutamic acid E. The JcSnRK2 cloned in Example 1 has acidic patches and is mainly composed of aspartic acid, with a ratio of about 53%, so it is classified into the SnRK2a subfamily .
3.3组织表达特异性分析3.3 Analysis of tissue expression specificity
如图所示12,本发明所述JcSnRK2基因在所检测的组织中均有表达,在根中表达量最高,其次是叶片和茎,花和种子则较少,这与拟南芥SnRK2.8、玉米ZmSAPK8、小麦TaSnRK2.4等成员的组织表达模式是一样的。As shown in Figure 12, the JcSnRK2 gene of the present invention is expressed in the detected tissues, and the expression level is the highest in roots, followed by leaves and stems, and less flowers and seeds, which is similar to that of Arabidopsis SnRK2.8 The tissue expression patterns of members such as ZmSAPK8 in maize and TaSnRK2.4 in wheat are the same.
3.4不同胁迫条件下基因表达模式分析3.4 Analysis of gene expression patterns under different stress conditions
1)ABA处理:如图13所示,本发明所述JcSnRK2基因的表达在ABA处理1h后就受到相对小幅度的诱导表达,3h时下调至与0h时相似水平,在6~24h时逐步升高到达最大值,然后再度降低。说明JcSnRK2能被ABA诱导表达。1) ABA treatment: as shown in Figure 13, the expression of the JcSnRK2 gene of the present invention is relatively slightly induced after 1 hour of ABA treatment, down-regulated to a level similar to that at 0 hour at 3 hours, and gradually increased at 6 to 24 hours High reaches a maximum value and then decreases again. It shows that JcSnRK2 can be induced by ABA.
2)盐胁迫:如图14所示,本发明所述JcSnRK2基因在盐胁迫1h时即受到激发,表达量显著增加,然后在3h时下降,之后维持一个相对稳定的水平,在24h时增加到后再度下调。说明JcSnRK2基因能被盐胁迫诱导并且在诱导初期就被快速激活。2) Salt stress: As shown in Figure 14, the JcSnRK2 gene of the present invention was stimulated at 1 hour of salt stress, and the expression level increased significantly, then decreased at 3 hours, then maintained a relatively stable level, and increased to Then down again. It shows that the JcSnRK2 gene can be induced by salt stress and is rapidly activated at the initial stage of induction.
3)干旱胁迫:如图15所示,本发明所述JcSnRK2基因在干旱胁迫1h时出现与盐胁迫相似的表达情况,即基因表达水平显著增加,然后于3h到6h的阶段下降到较低水平,在12h时上调后逐渐下降。说明JcSnRK2基因迅速响应干旱胁迫,并且出现周期性的调节过程。3) Drought stress: As shown in Figure 15, the expression of the JcSnRK2 gene of the present invention is similar to that of salt stress at 1 hour of drought stress, that is, the expression level of the gene increases significantly, and then decreases to a lower level at the stage of 3 hours to 6 hours , gradually decreased after being up-regulated at 12h. It shows that JcSnRK2 gene responds rapidly to drought stress, and there is a periodic regulation process.
4)冷胁迫:如图16所示,虽然整个冷胁迫过程中基因水平也有变化,但是幅度相对较小且没有一定规律,说明JcSnRK2受冷胁迫不明显。4) Cold stress: As shown in Figure 16, although the gene level also changed during the whole cold stress process, the magnitude was relatively small and irregular, indicating that JcSnRK2 was not significantly affected by cold stress.
综合上述JcSnRK2基因的各类分析,表明该基因与拟南芥SnRK2.8最为接近,故构建真核重组质粒转化拟南芥SnRK2.8缺失型植株,进一步检验其功能。Based on various analyzes of the above-mentioned JcSnRK2 gene, it was shown that this gene is the closest to Arabidopsis SnRK2.8, so a eukaryotic recombinant plasmid was constructed to transform Arabidopsis SnRK2.8-deleted plants, and its function was further tested.
实施例3:真核重组质粒的构建及其功能验证Example 3: Construction and functional verification of eukaryotic recombinant plasmids
1、材料1. Materials
1.1植物材料1.1 Plant material
拟南芥SnRK2.8缺失型突变体snf2.8种子(是使用T-DNA插入的方法使SnRK2.8突变的拟南芥种子)购买自位于美国Stanford的拟南芥信息资源网站(The Arabidopsis InformationResource,TAIR),它是国际上最为权威的拟南芥基因组数据库和拟南芥基因组注释系统,具有丰富的数据资源和最新的注释信息(http://www.arabidopsis.org/index.jsp)。Arabidopsis thaliana SnRK2.8 deletion mutant snf2.8 seeds (Arabidopsis thaliana seeds that use T-DNA insertion method to mutate SnRK2.8) were purchased from the Arabidopsis Information Resource website located in Stanford, USA (The Arabidopsis InformationResource , TAIR), which is the most authoritative Arabidopsis genome database and Arabidopsis genome annotation system in the world, with rich data resources and the latest annotation information (http://www.arabidopsis.org/index.jsp).
将拟南芥SnRK2.8缺失型突变体snf2.8种子于光照培养箱培养,24℃光照16h,18℃黑暗8h,营养土:蛭石=1:1。The Arabidopsis thaliana SnRK2.8 deletion mutant snf2.8 seeds were cultured in a light incubator with 16 hours of light at 24°C and 8 hours of darkness at 18°C, nutrient soil: vermiculite = 1:1.
1.2菌株1.2 Strains
大肠杆菌(Escherichia coli)DH5α:购自TIANGEN公司;Escherichia coli (Escherichia coli) DH5α: purchased from TIANGEN company;
农杆菌(Agrobacterium tumefaciens)LBA4404:为四川大学生命科学学院生物资源与生态环境教育部重点实验室保存,可从中国质粒载体菌株细胞株基因保藏中心购买。Agrobacterium tumefaciens LBA4404: preserved by the Key Laboratory of Biological Resources and Ecological Environment, Ministry of Education, School of Life Sciences, Sichuan University, and can be purchased from China Plasmid Vector Strain Cell Line Gene Collection Center.
1.3质粒1.3 Plasmids
pMD19-T:由pUC19载体改建而成,在pUC19载体的多克隆位点处的XbaⅠ和SalⅠ识别位点之间插入了EcoRⅤ识别位点,Ampr,是一种高效克隆PCR产物(TA cloning)的专用载体,购自TaKaRa;pMD19-T: Reconstructed from the pUC19 vector, the EcoRV recognition site is inserted between the XbaI and SalI recognition sites at the multiple cloning site of the pUC19 vector, and Ampr is a high-efficiency cloning PCR product (TA cloning) Special carrier, purchased from TaKaRa;
植物双元表达载体pBI121:含有卡那霉素抗性基因nptⅡ、CaMV35S启动子、GUS(β-glucuronidase,GUS)报告基因,为四川大学生命科学学院生物资源与生态环境教育部重点实验室保存,可从中国质粒载体菌株细胞株基因保藏中心购买。Plant binary expression vector pBI121: Contains kanamycin resistance gene nptⅡ, CaMV35S promoter, GUS (β-glucuronidase, GUS) reporter gene, and is preserved by the Key Laboratory of Biological Resources and Ecological Environment, Ministry of Education, School of Life Sciences, Sichuan University, It can be purchased from China Plasmid Vector Strain Cell Line Gene Collection Center.
1.4培养基和溶液1.4 Media and solutions
LB液体培养基:胰蛋白胨10g/L,酵母浸出物5g/L,NaCl5g/L。LB固体培养基:在液体培养基的基础上加入12.5g/L琼脂粉。LB liquid medium: tryptone 10g/L, yeast extract 5g/L, NaCl 5g/L. LB solid medium: add 12.5g/L agar powder on the basis of liquid medium.
YEB液体培养基:牛肉浸膏5g/L,酵母提取物5g/L,蛋白胨5g/L,蔗糖1g/L,MgSO4·7H2O0.5g/L。YEB固体培养基:在液体YEB培养基的基础上加15g/L的琼脂粉。YEB liquid medium: beef extract 5g/L, yeast extract 5g/L, peptone 5g/L, sucrose 1g/L, MgSO 4 ·7H 2 O 0.5g/L. YEB solid medium: add 15g/L agar powder on the basis of liquid YEB medium.
侵染液:用于农杆菌侵染拟南芥花序,配方为MS液体培养基加5%蔗糖。Infection solution: used for Agrobacterium to infect Arabidopsis inflorescences, the formula is MS liquid medium plus 5% sucrose.
上述培养基和溶液均在121℃高压灭菌20min后备用,抗生素需待培养基冷却到50℃左右时加入。The above-mentioned culture medium and solutions were all sterilized under high pressure at 121°C for 20 minutes for later use, and antibiotics were added when the culture medium was cooled to about 50°C.
2、实验方法2. Experimental method
2.1JcSnRK2基因ORF全长的获得2.1 Obtaining the full-length ORF of JcSnRK2 gene
经测序分析得知,JcSnRK2基因的ORF序列中没有Xba I和BamH I的酶切位点,因此,我们设计了构建真核重组质粒的引物如下(粗体字为保护碱基,斜体字为酶切位点):According to the sequencing analysis, the ORF sequence of the JcSnRK2 gene has no restriction sites of Xba I and BamH I, therefore, we designed the primers for constructing eukaryotic recombinant plasmids as follows (bold letters are protected bases, italics are enzymes cutting point):
Xba-F1:5′-GCGTCTAGAATGGAGCGTTATGAGATATTGAGAG-3'Xba-F1: 5′-GCGTCTAGAATGGAGCGTTATGAGATATTGAGAG-3′
Bam-R1:5′-CGCGGATCCTCACAATGCACAAACAAAATCACCAC-3)Bam-R1: 5′-CGCGGATCCTCACAATGCACAAACAAAATCACCAC-3)
按实施例1中的实验方法进行RT-PCR,循环条件为:95℃3min,35个循环(94℃30s、57℃30s、72℃1min),72℃10min。然后进行胶回收、连接pMD19-T载体、转化大肠杆菌后测序。RT-PCR was carried out according to the experimental method in Example 1, and the cycle conditions were: 95°C for 3min, 35 cycles (94°C for 30s, 57°C for 30s, 72°C for 1min), and 72°C for 10min. Then the gel was recovered, connected to the pMD19-T vector, transformed into Escherichia coli and then sequenced.
2.2pET-JcSnRK2质粒提取2.2 pET-JcSnRK2 plasmid extraction
选取测序成功的菌液进行扩大培养,使用质粒提取试剂盒Plasmid Mini Kit I(Omega),得到质粒pET-JcSnRK2。所有操作均在常温下进行,具体步骤如下:The bacterial liquid with successful sequencing was selected for expansion culture, and the plasmid pET-JcSnRK2 was obtained by using the plasmid extraction kit Plasmid Mini Kit I (Omega). All operations were carried out at room temperature, and the specific steps were as follows:
1)取菌液1.5~5ml,10,000rpm离心1min,弃上清;1) Take 1.5-5ml of bacterial solution, centrifuge at 10,000rpm for 1min, and discard the supernatant;
2)向沉淀中加250μl Solution I/RNase A,振荡悬菌;2) Add 250μl Solution I/RNase A to the pellet, and shake to suspend the bacteria;
3)加250μl Solution II,轻摆几次,待菌液澄清后放置2min;3) Add 250μl Solution II, shake lightly several times, and wait for 2 minutes after the bacterial solution is clarified;
4)加350μl Solution III,上下翻转数次至白色絮状物出现;4) Add 350μl Solution III, turn it up and down several times until white flocs appear;
5)于13,000rpm,离心10min,取上清或静置待用时取上清;5) Centrifuge at 13,000rpm for 10min, take the supernatant or take the supernatant when standing for use;
6)将Hibind DNA结合柱置于收集管,加200μl Buffer GPS,室温放置3~5min;6) Put the Hibind DNA binding column in the collection tube, add 200μl Buffer GPS, and place it at room temperature for 3-5 minutes;
7)于12,000rpm,离心2min,弃滤液;7) Centrifuge at 12,000rpm for 2min, discard the filtrate;
8)取步骤5)的上清于Hibind DNA结合柱中,13,000rpm离心1min,弃滤液;8) Take the supernatant from step 5) and put it in a Hibind DNA binding column, centrifuge at 13,000rpm for 1min, and discard the filtrate;
9)加500μl Buffer HB,10,000rpm,离心1min,弃滤液;9) Add 500μl Buffer HB, centrifuge at 10,000rpm for 1min, and discard the filtrate;
10)加700μl DNA Wash Buffer(含无水乙醇),10,000rpm离心1min,弃滤液;10) Add 700μl DNA Wash Buffer (containing absolute ethanol), centrifuge at 10,000rpm for 1min, and discard the filtrate;
11)重复步骤10)一次;11) Repeat step 10) once;
12)空柱,13,000rpm,离心2min,弃滤液,室温放置3~5min,挥干乙醇;12) Empty column, centrifuge at 13,000rpm for 2min, discard the filtrate, place at room temperature for 3-5min, evaporate ethanol to dryness;
13)将Hibind DNA结合柱置于新离心管上,取30~50μl无菌水或Elution Buffer悬空滴加入结合柱中;13) Put the Hibind DNA binding column on a new centrifuge tube, take 30-50 μl of sterile water or Elution Buffer and drop it into the binding column;
14)室温放置1~2min,13,000rpm,离心2min,-20°C保存备用。14) Place at room temperature for 1-2 minutes, centrifuge at 13,000 rpm for 2 minutes, and store at -20°C for later use.
2.3构建真核重组质粒pBI121-JcSnRK22.3 Construction of eukaryotic recombinant plasmid pBI121-JcSnRK2
构建方法如图17所示,操作如下:The construction method is shown in Figure 17, and the operation is as follows:
将pET-JcSnRK2和pBI121分别以Xba I、BamH I(购自TaKaRa)进行双酶切,反应体系如下:pET-JcSnRK2 and pBI121 were digested with Xba I and BamH I (purchased from TaKaRa) respectively, and the reaction system was as follows:
轻轻混匀,37℃水浴12~16h后,跑凝胶电泳分别回收带酶切位点的JcSnRK2基因片段和pBI121载体酶切片段(图18),具体步骤见实施例1的2.3。再用T4连接酶(购自TaKaRa)对上述两种双酶切的胶回收产物进行连接,反应体系如下:Mix gently, and after 12-16 hours in a 37°C water bath, run gel electrophoresis to recover the JcSnRK2 gene fragment with restriction sites and the pBI121 vector restriction fragment (Figure 18). For specific steps, see 2.3 of Example 1. T4 ligase (purchased from TaKaRa) was used to ligate the above two double-digested gel recovery products, and the reaction system was as follows:
轻轻混匀后,16℃温育12h。连接产物的转化见实施例1的2.4。选取测序正确的菌落扩大培养并提取质粒pBI121-JcSnRK2。After mixing gently, incubate at 16°C for 12h. For the transformation of the ligated product, see 2.4 of Example 1. Colonies with correct sequencing were selected for expansion and culture, and plasmid pBI121-JcSnRK2 was extracted.
2.4农杆菌感受态的制备2.4 Preparation of Competent Agrobacterium
1)从YEB固体培养基上挑取农杆菌LBA4404的单菌落,接种到10ml YEB液体培养基(含100μg/ml利福平)中,28℃,200rpm摇菌过夜;1) Pick a single colony of Agrobacterium LBA4404 from the YEB solid medium, inoculate it into 10ml YEB liquid medium (containing 100μg/ml rifampicin), shake the bacteria overnight at 28°C and 200rpm;
2)吸取1ml菌液,加至50ml YEB液体培养基中,28℃,200rpm摇菌至OD600为0.5左右。2) Take 1ml of the bacterial liquid, add it to 50ml of YEB liquid medium, shake the bacteria at 28°C and 200rpm until the OD 600 is about 0.5.
3)4℃,5,000rpm,离心5min,弃上清;3) Centrifuge at 5,000rpm at 4°C for 5min, discard the supernatant;
4)菌体用10ml预冷的20mM CaCl2重悬,冰浴30min;4) The bacteria were resuspended in 10ml of pre-cooled 20mM CaCl 2 and kept in ice bath for 30min;
5)4°C,5,000rpm,离心5min,弃上清;5) 4°C, 5,000rpm, centrifuge for 5min, discard the supernatant;
6)菌体用约1ml预冷的20mM CaCl2重悬,分装后于-70°C保存。6) The cells were resuspended with about 1ml of pre-cooled 20mM CaCl 2 and stored at -70°C after aliquoting.
2.5农杆菌的转化2.5 Transformation of Agrobacterium
1)从超低温冰箱中取出农杆菌感受态,冰浴冻融;1) Take out the competent Agrobacterium from the ultra-low temperature refrigerator, freeze and thaw in an ice bath;
2)将10μl本实施例2.3所构建的真核重组质粒pBI121-JcSnRK2加入农杆菌感受态,轻轻混匀,冰浴30min;2) Add 10 μl of the eukaryotic recombinant plasmid pBI121-JcSnRK2 constructed in Example 2.3 into the competent Agrobacterium, mix gently, and ice-bath for 30 minutes;
3)于37℃水浴5min,迅速至冰上放置3~5min;3) Place in a water bath at 37°C for 5 minutes, then quickly place on ice for 3-5 minutes;
4)在无菌条件下加入800μl液体YEB培养基,于28℃,175rpm摇菌3~6h;4) Add 800 μl liquid YEB medium under sterile conditions, and shake the bacteria at 28°C and 175rpm for 3-6 hours;
5)室温下,4,000rpm离心2min,弃上清;5) Centrifuge at 4,000rpm for 2min at room temperature, discard the supernatant;
6)菌体用约80μl液体YEB培养基重悬后涂布平板,于28℃培养两天;6) The bacteria were resuspended in about 80 μl liquid YEB medium, spread on the plate, and cultured at 28°C for two days;
7)挑取单菌落,用JcSnRK2全长特异引物SP1和SP2进行菌落PCR(图19),选取PCR成功的培养物进行后续实验。7) Pick a single colony, perform colony PCR with JcSnRK2 full-length specific primers SP1 and SP2 (Figure 19), and select cultures with successful PCR for subsequent experiments.
2.6农杆菌侵染拟南芥2.6 Agrobacterium infection of Arabidopsis
1)将步骤2.5所得PCR成功的农杆菌加入YEB液体培养基(含有100μg/ml利福平和80μg/ml卡那霉素),28℃摇菌至OD600约为0.6;1) Add the Agrobacterium with successful PCR obtained in step 2.5 into YEB liquid medium (containing 100 μg/ml rifampicin and 80 μg/ml kanamycin), and shake the bacteria at 28°C until the OD 600 is about 0.6;
2)室温下,4,000rpm离心2min,菌体沉淀用适量侵染液重悬;2) Centrifuge at 4,000 rpm for 2 minutes at room temperature, and resuspend the bacterial pellet with an appropriate amount of infection solution;
3)选择拟南芥花序浸泡在上述溶液中1min左右;3) Select the inflorescence of Arabidopsis thaliana and soak it in the above solution for about 1 minute;
4)植株暗培养过夜后放回光照培养箱,按24℃光照16h,18℃黑暗8h的条件继续培养。4) Plants were cultured overnight in the dark and then returned to the light incubator, and continued to culture under the conditions of 16 hours of light at 24°C and 8 hours of darkness at 18°C.
2.7转基因拟南芥的鉴定2.7 Identification of transgenic Arabidopsis
2.7.1GUS染色法2.7.1 GUS staining method
取待测样品置于X-Gluc染色反应液(50mmol/L Na3PO4,0.1%Trition-100,20%甲醇,0.5mg/ml X-Gluc,pH7.0)中,在37℃烘箱保温过夜,用95%乙醇脱色后观察。Take the sample to be tested and place it in X-Gluc staining reaction solution (50mmol/L Na 3 PO 4 , 0.1% Trition-100, 20% methanol, 0.5mg/ml X-Gluc, pH 7.0), and keep it in an oven at 37°C Observe overnight after destaining with 95% ethanol.
2.7.2PCR检测基因整合情况2.7.2 PCR detection of gene integration
按实施例1的6.1的操作提取转基因拟南芥叶片的DNA,并以该DNA为模板、JcSnRK2全长的特异引物SP1和SP2进行PCR,循环条件为:95℃3min,35个循环(94℃30s、57℃30s、72℃1min),72℃10min。PCR产物用1%琼脂糖凝胶电泳分析。According to the operation of 6.1 in Example 1, the DNA of transgenic Arabidopsis leaves was extracted, and PCR was performed using the DNA as a template and the full-length specific primers SP1 and SP2 of JcSnRK2. The cycle conditions were: 95°C for 3min, 35 cycles (94°C 30s, 57°C 30s, 72°C 1min), 72°C 10min. PCR products were analyzed by 1% agarose gel electrophoresis.
2.7.3RT-PCR检测基因转录表达情况2.7.3 RT-PCR detection of gene transcription and expression
按实施例1方法提取转基因拟南芥的总RNA,用M-MLV反转录酶反转录合成cDNA第一链。以反转录产物为模板,用JcSnRK2全长的特异引物SP1和SP2进行PCR,该反应以拟南芥的18S rRNA为参考基因,引物序列如下:The total RNA of the transgenic Arabidopsis was extracted according to the method in Example 1, and the first strand of cDNA was synthesized by reverse transcription with M-MLV reverse transcriptase. Using the reverse transcription product as a template, PCR was carried out with the full-length specific primers SP1 and SP2 of JcSnRK2. The reaction uses Arabidopsis 18S rRNA as a reference gene. The primer sequences are as follows:
At18sF:5′-GAGTCATCAGCTCGCGTTGAC-3'At18sF: 5′-GAGTCATCAGCTCGCGTTGAC-3′
At18sR:5′-CTTCACCGGATCATTCAATCG-3'At18sR: 5′-CTTCACCGGATCATTCAATCG-3′
循环条件为:95℃3min,35个循环(94℃30s、57℃30s、72℃1min),72℃10min。PCR产物用1%琼脂糖凝胶电泳分析。The cycle conditions are: 95°C for 3min, 35 cycles (94°C for 30s, 57°C for 30s, 72°C for 1min), 72°C for 10min. PCR products were analyzed by 1% agarose gel electrophoresis.
2.8转基因拟南芥种子的筛选2.8 Screening of transgenic Arabidopsis seeds
1)用80μg/ml的kan(卡那霉素)水溶液彻底浸水滤纸,至于培养皿中,将收获的T0代种子均匀撒在滤纸上,4℃暗培养两天后,于室温培养,每两天补一次kan水;1) Thoroughly soak the filter paper with 80 μg/ml kan (kanamycin) aqueous solution. As for the petri dish, sprinkle the harvested T0 generation seeds evenly on the filter paper, cultivate in the dark at 4°C for two days, and then culture at room temperature, every two days Make up kan water once;
2)一周后,将萌发的kan抗性拟南芥幼苗移栽至营养土:蛭石=1:1的花盆中,于光照培养箱生长为T1代植株,经GUS、PCR验证成功的植株分别收获拟南芥T2代种子并做好记录;2) One week later, the germinated kan-resistant Arabidopsis seedlings were transplanted into pots with nutrient soil: vermiculite = 1:1, and grown into T1 generation plants in the light incubator, which were successfully verified by GUS and PCR Harvest Arabidopsis thaliana T 2 generation seeds from each plant and make a record;
3)将拟南芥T2代种子置于含80μg/ml kan的MS固体培养基上萌发,出现了耐受:敏感=3:1的分化,选取抗kan的拟南芥幼苗进行培养得到的拟南芥T3代种子(即植物转化体),呈现100%的kan抗性,命名为JK2用于后续实验。3) Arabidopsis thaliana T 2 generation seeds were germinated on MS solid medium containing 80 μg/ml kan, and the differentiation of tolerance:sensitivity = 3:1 appeared, and the kan-resistant Arabidopsis seedlings were selected for cultivation Arabidopsis T 3 generation seeds (i.e., plant transformants), showing 100% kan resistance, were named JK2 for subsequent experiments.
2.9转基因拟南芥的抗盐、耐旱性验证2.9 Salt and drought tolerance verification of transgenic Arabidopsis
2.9.1根生长情况2.9.1 Root growth
选取拟南芥突变体snf2.8种子和JK2种子,用体积分数为70%的乙醇浸泡1min,再用质量分数为5%的NaClO水溶液浸泡5~7min,用灭菌ddH2O清洗几次,均匀置于MS固体培养基上,4℃暗培养2天后,放于光照培养箱培养,1周后以统计根长情况。The seeds of Arabidopsis mutant snf2.8 and JK2 were soaked in 70% ethanol for 1 min, then in 5% NaClO aqueous solution for 5-7 min, and washed several times with sterilized ddH 2 O. Evenly placed on MS solid medium, cultured in the dark at 4°C for 2 days, then placed in a light incubator for culture, and the root length was counted after 1 week.
snf2.8种子和JK2种子分别入土(营养土:蛭石=1:1)培养约45天,观察幼苗根系发育情况。Snf2.8 seeds and JK2 seeds were cultured in soil (nutrient soil: vermiculite = 1:1) for about 45 days, and the development of the root system of the seedlings was observed.
2.9.2种子萌发率2.9.2 Seed germination rate
选取拟南芥突变体snf2.8种子和JK2种子,用体积分数为70%的乙醇浸泡1min,再用质量分数为5%的NaClO水溶液处理5~7min,用灭菌ddH2O清洗几次,以约90粒种子/培养皿分别将拟南芥snf2.8种子和JK2种子均匀置于MS、MS+150mM NaCl、MS+200mM甘露醇固体培养基上,4℃暗培养2天后,放于光照培养箱培养,2周后以两片绿叶为标准统计发芽率。The seeds of Arabidopsis mutant snf2.8 and JK2 were soaked in 70% ethanol for 1 min, then treated with 5% NaClO aqueous solution for 5-7 min, and washed several times with sterilized ddH 2 O. Put Arabidopsis snf2.8 seeds and JK2 seeds evenly on MS, MS+150mM NaCl, MS+200mM mannitol solid medium with about 90 seeds/petri dish, culture in dark at 4°C for 2 days, then put them in light Cultivate in an incubator, and after 2 weeks, take two green leaves as the standard to count the germination rate.
2.9.3抗盐性验证2.9.3 Salt resistance verification
选取拟南芥突变体snf2.8和JK2在MS培养基上培养2周且生长状况基本一致的无菌苗,移至NaCl含量为150mM、200mM、250mM培养皿中,光照培养箱培养30天,观察绿苗率。The aseptic seedlings of Arabidopsis mutants snf2.8 and JK2 were cultured on MS medium for 2 weeks and had basically the same growth status, and were transferred to petri dishes with NaCl content of 150mM, 200mM, and 250mM, and cultured in a light incubator for 30 days. Observe the green seedling rate.
拟南芥突变体snf2.8种子和JK2种子分别入土培养30天和45天后,选取两者生长情况接近的幼苗,用450mM NaCl溶液从盆底供水1个月,分别于2周和1个月时观察幼苗生长情况。Seeds of Arabidopsis mutant snf2.8 and JK2 were cultured in soil for 30 days and 45 days, respectively, and the seedlings with similar growth conditions were selected, and water was supplied from the bottom of the pot with 450mM NaCl solution for 1 month. Observe the growth of seedlings.
2.9.4耐旱性验证2.9.4 Verification of drought tolerance
1)选取snf2.8和JK2在MS培养基上培养2周且生长状况基本一致的无菌苗移至甘露醇含量为200mM、250mM、300mM的MS估计培养基中,光照培养箱培养30天,观察叶片萎缩情况。1) Select the sterile seedlings of snf2.8 and JK2 that were cultured on MS medium for 2 weeks and have basically the same growth status, and move them to MS estimation medium with mannitol content of 200mM, 250mM, and 300mM, and cultivate them in a light incubator for 30 days. Observe for leaf shrinkage.
2)拟南芥突变体snf2.8种子和JK2种子分别入土培养30天和45天后,选取两者生长情况接近的幼苗,停止供水1个月,观察生长情况。2) After the Arabidopsis mutant snf2.8 seeds and JK2 seeds were cultured in soil for 30 days and 45 days, respectively, the seedlings with similar growth conditions were selected, and the water supply was stopped for 1 month to observe the growth conditions.
3)分别取入土培养30天左右的拟南芥突变体snf2.8和JK2新鲜叶片称重,记为FW(freshweight,鲜重)。再置于24℃培养箱中暗培养,分别于不同时间点(0h、0.5h、1h、2h、3h、4h、5h、6h、7h、8h)取出两者的离体叶片再称重,记为DTW(designated time weight,指定时间重量)。然后于85℃烘箱内烘烤24h后称重,记为DW(dought weight,干重)。重复3次,分别计算两者离体叶片失水率WLR(water loss rate):3) The fresh leaves of Arabidopsis thaliana mutants snf2.8 and JK2 cultured in soil for about 30 days were taken and weighed, and recorded as FW (freshweight, fresh weight). They were then placed in a 24°C incubator for dark culture, and the detached leaves of the two were taken out at different time points (0h, 0.5h, 1h, 2h, 3h, 4h, 5h, 6h, 7h, 8h) and weighed again. It is DTW (designated time weight, designated time weight). Then it was baked in an oven at 85°C for 24 hours and then weighed, which was recorded as DW (dought weight, dry weight). Repeat 3 times, and calculate the water loss rate (WLR) of the two isolated leaves respectively:
WLR=(DTW-DW)/(FW-DW)×100%WLR=(DTW-DW)/(FW-DW)×100%
离体叶片失水率WLR越小,抗早性越强。The smaller the WLR of the detached leaves, the stronger the early resistance.
2.9.5对渗透胁迫响应基因的调控情况验证2.9.5 Verification of the regulation of osmotic stress response genes
选择4个拟南芥响应渗透胁迫的下游基因AREB1、LEA、RD29A、RD29B进行荧光定量PCR检查,以检测其表达水平变化,从而推断JcSnRK2的功能。Four downstream genes AREB1, LEA, RD29A, and RD29B in Arabidopsis thaliana in response to osmotic stress were selected for real-time quantitative PCR to detect changes in their expression levels, thereby inferring the function of JcSnRK2.
取干旱胁迫0h和4h的拟南芥叶片提取总RNA,按照实施例2所述的荧光定量PCR的方法检测。用QP1和QP2作为检测JcSnRK2基因表达情况的引物,其引物序列见实施例2的2.1。选取拟南芥18S rRNA为内参基因,引物为At18sF和At18sR,其引物序列见本实施例中的2.7.3。Total RNA was extracted from leaves of Arabidopsis thaliana under drought stress for 0 h and 4 h, and detected according to the fluorescent quantitative PCR method described in Example 2. QP1 and QP2 were used as primers for detecting the expression of JcSnRK2 gene, and the primer sequences are shown in 2.1 of Example 2. Select Arabidopsis thaliana 18S rRNA as the internal reference gene, and the primers are At18sF and At18sR, and the primer sequences are shown in 2.7.3 of this embodiment.
反应程序为95℃变性2min后,进入95℃10s,60℃1min的45个循环,最后从65℃到95℃进行溶解曲线分析。The reaction program was denaturation at 95°C for 2min, followed by 45 cycles of 95°C for 10s and 60°C for 1min, and finally melting curve analysis from 65°C to 95°C.
引物序列如下:The primer sequences are as follows:
AREB1-F:5′-CATACCAGCAATCGCAACAG-3'AREB1-F: 5′-CATACCAGCAATCGCAACAG-3′
AREB1-R:5′-CTCCAAGTCCCACAAGACCA-3'AREB1-R: 5′-CTCCAAGTCCCCACAAGACCA-3′
LEA-F:5′-TCCAACCCACTCACACCACCA-3'LEA-F: 5′-TCCAACCCACTCACACCACCA-3′
LEA-R:5′-CAGAAGCCAAACCCTCCTCA-3'LEA-R: 5′-CAGAAGCCAAACCCTCCTCA-3′
RD29A-F:5′-GCAATGAGCATGAGCAAGATC-3'RD29A-F: 5′-GCAATGAGCATGAGCAAGATC-3′
RD29A-R:5′-TCGGAAGACACGACAGGAAAC-3'RD29A-R: 5′-TCGGAAGACACGACAGGAAAC-3′
RD29B-F:5′-TCTGACCACACCAAACCCATT-3'RD29B-F: 5′-TCTGACCACACCAAACCCATT-3′
RD29B-R:5′-CCTCTCTTTTCGCTTCCCAG-3'RD29B-R: 5′-CCTCTCTTTTTCGCTTCCCAG-3′
3、结果3. Results
3.1转基因植株的鉴定3.1 Identification of transgenic plants
3.1.1GUS染色鉴定3.1.1 GUS staining identification
本发明所述的重组质粒中同时含有JcSnRK2和GUS的开放阅读框,35S启动子先后启动这两个基因的表达,通过染色可以鉴定是否转化成功。如图20所示,经GUS染色鉴定,转JcSnRK2的拟南芥幼苗、角果和花均有GUS基因成功表达后的蓝色出现,证明转化成功且JcSnRK2基因在多个组织中均有表达。The recombinant plasmid of the present invention contains the open reading frames of JcSnRK2 and GUS at the same time, and the 35S promoter successively activates the expression of these two genes, and whether the transformation is successful can be identified by staining. As shown in Fig. 20, as identified by GUS staining, the Arabidopsis seedlings, siliques and flowers transfected with JcSnRK2 all had blue color after the successful expression of the GUS gene, which proved that the transformation was successful and the JcSnRK2 gene was expressed in multiple tissues.
3.1.2PCR检测3.1.2 PCR detection
分别提取拟南芥突变体snf2.8和JK2植株叶片的DNA和总RNA,分别进行PCR和RT-PCR,结果如图21所示,所述snf2.8植株叶片的DNA和总RNA没有扩增出条带,所述JK2植株叶片的DNA和总RNA都扩增出了1017bp的特异片段,表明麻疯树JcSnRK2基因已整合到拟南芥的基因组DNA当中并且成功表达。The DNA and total RNA of the leaves of the Arabidopsis mutants snf2.8 and JK2 were extracted respectively, and PCR and RT-PCR were performed respectively. As shown in Figure 21, the DNA and total RNA of the leaves of the snf2.8 plants were not amplified A band was obtained, and a specific fragment of 1017 bp was amplified from the DNA and total RNA of the leaves of the JK2 plant, indicating that the Jatropha curcas JcSnRK2 gene had been integrated into the genomic DNA of Arabidopsis thaliana and expressed successfully.
3.2拟南芥转基因植物的结果及分析3.2 Results and analysis of Arabidopsis transgenic plants
3.2.1植株根生长得到促进3.2.1 Plant root growth is promoted
对拟南芥植株根生长的观察显示:JK2拟南芥植株的根生长明显比拟南芥突变体snf2.8要快,如图22(A)和图22(B)所示,在MS固体培养基上生长一周后,JK2拟南芥植株的平均根长为1.7cm,而拟南芥突变体snf2.8植株根长为1.3cm,前者是后者根生长速度的1.3倍多。而在土中培养45天以后,如图22(C)所示,JK2拟南芥植株的根系明显要更为发达,拥有更多侧根。上述两种现象都是有利于抵抗干旱逆境的表现。The observation of root growth of Arabidopsis plants showed that the root growth of JK2 Arabidopsis plants was significantly faster than that of the Arabidopsis mutant snf2.8, as shown in Figure 22(A) and Figure 22(B), cultured on MS solid After one week of growth on the base, the average root length of JK2 Arabidopsis plants was 1.7 cm, while the root length of Arabidopsis mutant snf2.8 plants was 1.3 cm, and the former was more than 1.3 times the root growth rate of the latter. After 45 days of cultivation in soil, as shown in Figure 22(C), the root system of JK2 Arabidopsis plants is obviously more developed and has more lateral roots. The above two phenomena are beneficial to the performance of resistance to drought adversity.
3.2.2植株种子在渗透胁迫下发芽率提高3.2.2 Increased germination rate of plant seeds under osmotic stress
对拟南芥植株发芽率的观察显示(图23):JK2拟南芥种子在渗透胁迫下的萌发率高于拟南芥突变体snf2.8种子。分别用含150mM NaCl、200mM甘露醇的MS固体培养基模拟盐胁迫和干旱胁迫环境,生长2周后,两者在正常环境几乎均能长出两片绿叶,而在盐胁迫下,拟南芥突变体snf2.8种子的发芽率为79.56%,而JK2拟南芥种子的发芽率维持在87.64%;干旱胁迫下,拟南芥突变体snf2.8种子的发芽率为70.65%,JK2拟南芥种子的发芽率为84.61%。盐胁迫和干旱胁迫虽然都会使发芽率下降,但对JK2拟南芥种子抑制效果相对较小,说明JcSnRK2的表达可以提高种子萌发阶段对渗透逆境的抵抗能力。Observation on the germination rate of Arabidopsis plants showed (Figure 23): the germination rate of JK2 Arabidopsis seeds under osmotic stress was higher than that of Arabidopsis mutant snf2.8 seeds. The MS solid medium containing 150mM NaCl and 200mM mannitol was used to simulate salt stress and drought stress respectively. After 2 weeks of growth, both of them could grow two green leaves in normal environment, while under salt stress, Arabidopsis The germination rate of mutant snf2.8 seeds was 79.56%, while the germination rate of JK2 Arabidopsis seeds was maintained at 87.64%. Under drought stress, the germination rate of Arabidopsis mutant snf2. The germination rate of mustard seeds was 84.61%. Although both salt stress and drought stress can reduce the germination rate, the inhibitory effect on JK2 Arabidopsis seeds is relatively small, indicating that the expression of JcSnRK2 can improve the resistance of seeds to osmotic stress during germination.
3.2.3植株抗盐性增强3.2.3 Increased salt resistance of plants
在NaCl含量分别为150mM、200mM、250mM的MS固体培养皿中,光照培养箱培养30天,结果如表1和图24所示,三种浓度的NaCl均对拟南芥突变体snf2.8的生长和发育产生严重抑制,在NaCl含量为150mM的MS固体培养皿中的绿苗率仅为7.25%,而之后的两个浓度中没有绿苗出现,另外以第3、4片叶的出现率来统计拟南芥幼苗的生长速度,NaCl对拟南芥突变体snf2.8幼苗的生长产生严重抑制,四片叶率依次为27.54%、17.14%和6.25%。而JK2拟南芥的幼苗在150mM NaCl中生长速度良好,绿苗率为57.39%,四片叶率能达到80%,分别是拟南芥突变体snf2.8的近8倍和3倍。当NaCl浓度升高后,JK2拟南芥幼苗的生长也相应受到抑制,但是比拟南芥突变体snf2.8的耐盐性明显提高,当NaCl浓度为200mM时绿苗率和四片叶率仍为拟南芥突变体snf2.8在150mM NaCl当中的2倍左右,并且在拟南芥突变体snf2.8没有绿苗出现的情况下,JK2拟南芥还保持有15.63%的绿苗生长。当NaCl浓度达到250mM时,两者均没有绿苗出现,但JK2拟南芥幼苗的生长速度仍为拟南芥突变体snf2.8的2倍。In MS solid culture dishes with NaCl contents of 150mM, 200mM, and 250mM respectively, cultured in a light incubator for 30 days, the results are shown in Table 1 and Figure 24. The growth and development were severely inhibited, and the green seedling rate in the MS solid culture dish with NaCl content of 150mM was only 7.25%, but no green seedlings appeared in the following two concentrations, and the appearance rate of the 3rd and 4th leaves To count the growth rate of Arabidopsis thaliana seedlings, NaCl severely inhibited the growth of Arabidopsis mutant snf2.8 seedlings, and the four-leaf ratios were 27.54%, 17.14% and 6.25% respectively. The seedlings of JK2 Arabidopsis grew well in 150mM NaCl, with a green seedling rate of 57.39% and a four-leaf rate of 80%, which were nearly 8 times and 3 times that of the Arabidopsis mutant snf2.8, respectively. When the NaCl concentration increased, the growth of JK2 Arabidopsis seedlings was also inhibited, but the salt tolerance of the Arabidopsis mutant snf2.8 was significantly improved. When the NaCl concentration was 200mM, the green shoot rate and four-leaf rate remained It is about 2 times that of the Arabidopsis mutant snf2.8 in 150mM NaCl, and when the Arabidopsis mutant snf2.8 has no green shoots, JK2 Arabidopsis still maintains 15.63% green shoots. When the NaCl concentration reached 250mM, no green shoots appeared in both, but the growth rate of JK2 Arabidopsis seedlings was still twice that of the Arabidopsis mutant snf2.8.
表1盐胁迫下绿苗率和四片叶率统计Table 1 Statistics of green seedling rate and four leaf rate under salt stress
另外,入土培养30天和45天后,用450mM NaCl溶液从盆底供水。2周后,如图25所示,拟南芥突变体snf2.8植株都出现了不同程度的叶片失水情况,虽然没有明显的黄化现象,但是植株都出现软塌的情况;而JK2拟南芥植株均表现出更好的生长趋势,特别是45天后的植株仍表现出正常生长的状态。1个月后,无论是30天还是45天的拟南芥突变体snf2.8植株,半数以上的叶片都出现明显且严重的黄化现象,而JK2拟南芥植株叶片仅表现出轻微发黄现象。说明JcSnRK2的表达增强了植株的抗盐性。In addition, after 30 days and 45 days of cultivation in the soil, water was supplied from the bottom of the pot with 450 mM NaCl solution. After 2 weeks, as shown in Figure 25, the plants of the Arabidopsis mutant snf2.8 all experienced varying degrees of leaf dehydration. Although there was no obvious yellowing phenomenon, the plants all appeared soft and collapsed; The Arabidopsis thaliana plants all showed a better growth trend, especially the plants after 45 days still showed a normal growth state. After 1 month, more than half of the leaves of Arabidopsis mutant snf2.8 plants showed obvious and severe yellowing phenomenon no matter it was 30 days or 45 days old, while the leaves of JK2 Arabidopsis plants only showed slight yellowing Phenomenon. It indicated that the expression of JcSnRK2 enhanced the salt resistance of the plants.
3.2.3植株抗旱性增强3.2.3 Increased drought resistance of plants
利用甘露醇模拟干旱条件,具体情况如图26所示,拟南芥突变体snf2.8在甘露醇浓度为200mM和250mM时第1、2片叶生长情况良好,第3、4叶片出现不同程度的萎焉,但当浓度加大至300mM时,4片叶均出现严重的萎焉。而JK2拟南芥在前两种甘露醇浓度下能够维持相对正常的生长,在含有300mM甘露醇的MS培养基上生长,第3、4片也的发育受到抑制,与拟南芥突变体snf2.8在甘露醇浓度为250mM时的性状相似,没有出现4片叶均受到抑制的情况。Mannitol was used to simulate drought conditions, as shown in Figure 26. The Arabidopsis mutant snf2.8 grew well on the first and second leaves when the mannitol concentration was 200mM and 250mM, and the third and fourth leaves appeared to varying degrees However, when the concentration increased to 300mM, severe wilting occurred in all four leaves. However, JK2 Arabidopsis can maintain relatively normal growth under the first two concentrations of mannitol, and when grown on MS medium containing 300mM mannitol, the development of the third and fourth slices is also inhibited, which is similar to that of the Arabidopsis mutant snf2 .8 The traits were similar when the concentration of mannitol was 250mM, and there was no situation that all four leaves were inhibited.
另外,分别入土培养30天和45天后,停止供水1个月,观察生长情况。结果如图27所示,30天的拟南芥突变体snf2.8植株受干旱胁迫影响严重,个别叶片已经完全干枯发黄,45天的拟南芥突变体snf2.8植株虽然仍然保持全株绿色,但是多数叶片呈现卷曲状态;而30天和45天的JK2拟南芥植株的生长状况均比拟南芥突变体snf2.8良好,30天的JK2拟南芥植株没有枯叶出现,45天的JK2拟南芥植株只有少数叶片有略微卷曲的情况。In addition, after 30 days and 45 days of cultivation in the soil, the water supply was stopped for 1 month, and the growth conditions were observed. The results are shown in Figure 27. The 30-day-old Arabidopsis mutant snf2.8 plants were severely affected by drought stress, and some leaves were completely dry and yellow. Although the 45-day-old Arabidopsis mutant snf2.8 plants still maintained the whole plant Green, but most of the leaves are curled; while the 30-day and 45-day JK2 Arabidopsis plants grow better than the Arabidopsis mutant snf2.8, the 30-day JK2 Arabidopsis plants have no dead leaves, and the 45-day Only a few leaves of the JK2 Arabidopsis plants were slightly curled.
通过对离体叶片失水率的检测发现,JK2拟南芥离体叶片的失水率要明显低于拟南芥突变体snf2.8(图28)。The water loss rate of the isolated leaves of JK2 Arabidopsis was significantly lower than that of the Arabidopsis mutant snf2.8 (Fig. 28).
说明JcSnRK2的表达提高了植株的抗旱性。It indicated that the expression of JcSnRK2 improved the drought resistance of the plants.
3.2.4JcSnRK2抗旱作用机制3.2.4 Mechanism of JcSnRK2 drought resistance
选择部分响应渗透胁迫的下游基因AREB1、LEA、RD29A、RD29B,用实时荧光定量PCR检查其表达水平的变化,检测结果如图29所示,发现干旱胁迫4h后,JcSnRK2被上调,上述AREB1、LEA、RD29A、RD29B基因的表达量均被上调,且在JK2拟南芥中的上调水平不同程度地强于拟南芥突变体snf2.8。说明JcSnRK2可以被高渗逆境激活,可能与拟南芥SnRK2.8类似,通过与ABF/AREB等作用而启动胁迫应答。The downstream genes AREB1, LEA, RD29A, and RD29B that partially responded to osmotic stress were selected, and the changes in their expression levels were checked by real-time fluorescent quantitative PCR. , RD29A, and RD29B genes were all up-regulated, and the up-regulated levels in JK2 Arabidopsis were stronger than those in Arabidopsis mutant snf2.8. It shows that JcSnRK2 can be activated by hyperosmotic stress, which may be similar to Arabidopsis SnRK2.8, and it can initiate stress response by interacting with ABF/AREB and so on.
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苹果SnRK2基因家族的鉴定和生物信息学分析;陈娜娜 等;《南京农业大学园艺学院》;20130505(第13期);全文 * |
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