CA2619833C - Utilisation de genes associes a crispr-cas - Google Patents
Utilisation de genes associes a crispr-cas Download PDFInfo
- Publication number
- CA2619833C CA2619833C CA2619833A CA2619833A CA2619833C CA 2619833 C CA2619833 C CA 2619833C CA 2619833 A CA2619833 A CA 2619833A CA 2619833 A CA2619833 A CA 2619833A CA 2619833 C CA2619833 C CA 2619833C
- Authority
- CA
- Canada
- Prior art keywords
- crispr
- cell
- spacer
- repeats
- cas
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
- 108090000623 proteins and genes Proteins 0.000 title claims abstract description 566
- 108091033409 CRISPR Proteins 0.000 title description 1084
- 150000007523 nucleic acids Chemical class 0.000 claims abstract description 263
- 108020004707 nucleic acids Proteins 0.000 claims abstract description 202
- 102000039446 nucleic acids Human genes 0.000 claims abstract description 202
- 238000013518 transcription Methods 0.000 claims abstract description 137
- 230000035897 transcription Effects 0.000 claims abstract description 137
- 125000006850 spacer group Chemical group 0.000 claims description 719
- 102000004169 proteins and genes Human genes 0.000 claims description 241
- 241001515965 unidentified phage Species 0.000 claims description 148
- 239000013612 plasmid Substances 0.000 claims description 71
- 230000002068 genetic effect Effects 0.000 claims description 22
- 238000003780 insertion Methods 0.000 claims description 20
- 230000037431 insertion Effects 0.000 claims description 20
- 230000001965 increasing effect Effects 0.000 claims description 16
- 230000001939 inductive effect Effects 0.000 claims description 5
- 230000003028 elevating effect Effects 0.000 claims description 3
- 238000010354 CRISPR gene editing Methods 0.000 description 969
- 210000004027 cell Anatomy 0.000 description 529
- 235000018102 proteins Nutrition 0.000 description 234
- 239000000047 product Substances 0.000 description 158
- 101100005249 Escherichia coli (strain K12) ygcB gene Proteins 0.000 description 134
- 101150055191 cas3 gene Proteins 0.000 description 134
- 238000000034 method Methods 0.000 description 129
- 101150111685 cas4 gene Proteins 0.000 description 128
- 108020004414 DNA Proteins 0.000 description 127
- 101100219622 Escherichia coli (strain K12) casC gene Proteins 0.000 description 126
- 101100326871 Escherichia coli (strain K12) ygbF gene Proteins 0.000 description 121
- 101150117416 cas2 gene Proteins 0.000 description 121
- 101100494762 Mus musculus Nedd9 gene Proteins 0.000 description 119
- 241000894006 Bacteria Species 0.000 description 81
- 108091028043 Nucleic acid sequence Proteins 0.000 description 75
- 230000001580 bacterial effect Effects 0.000 description 71
- 101100382541 Escherichia coli (strain K12) casD gene Proteins 0.000 description 60
- 101100387131 Myxococcus xanthus (strain DK1622) devS gene Proteins 0.000 description 60
- 101150049463 cas5 gene Proteins 0.000 description 60
- 101100273269 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) cse3 gene Proteins 0.000 description 57
- 101150106467 cas6 gene Proteins 0.000 description 57
- JVTAAEKCZFNVCJ-UHFFFAOYSA-N lactic acid Chemical compound CC(O)C(O)=O JVTAAEKCZFNVCJ-UHFFFAOYSA-N 0.000 description 54
- 239000007858 starting material Substances 0.000 description 51
- 241000194020 Streptococcus thermophilus Species 0.000 description 45
- 125000003729 nucleotide group Chemical group 0.000 description 45
- 239000002773 nucleotide Substances 0.000 description 44
- 239000013598 vector Substances 0.000 description 41
- 235000013305 food Nutrition 0.000 description 33
- 241000894007 species Species 0.000 description 33
- 238000003752 polymerase chain reaction Methods 0.000 description 32
- 238000004519 manufacturing process Methods 0.000 description 29
- 239000013615 primer Substances 0.000 description 29
- -1 cas1B Proteins 0.000 description 28
- 230000036039 immunity Effects 0.000 description 28
- 150000001413 amino acids Chemical group 0.000 description 27
- 239000004310 lactic acid Substances 0.000 description 27
- 235000014655 lactic acid Nutrition 0.000 description 27
- 230000004048 modification Effects 0.000 description 25
- 238000012986 modification Methods 0.000 description 25
- 235000001014 amino acid Nutrition 0.000 description 23
- 239000012634 fragment Substances 0.000 description 23
- 229940024606 amino acid Drugs 0.000 description 22
- 241000194017 Streptococcus Species 0.000 description 21
- 230000003115 biocidal effect Effects 0.000 description 21
- 235000013351 cheese Nutrition 0.000 description 20
- 230000000692 anti-sense effect Effects 0.000 description 19
- 108091081062 Repeated sequence (DNA) Proteins 0.000 description 18
- 108020004511 Recombinant DNA Proteins 0.000 description 16
- 230000000295 complement effect Effects 0.000 description 15
- 239000000203 mixture Substances 0.000 description 14
- 235000013618 yogurt Nutrition 0.000 description 14
- 238000004458 analytical method Methods 0.000 description 13
- 235000013365 dairy product Nutrition 0.000 description 13
- 208000015181 infectious disease Diseases 0.000 description 13
- 230000010076 replication Effects 0.000 description 13
- 230000007923 virulence factor Effects 0.000 description 13
- 239000000304 virulence factor Substances 0.000 description 13
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 12
- 241000194034 Lactococcus lactis subsp. cremoris Species 0.000 description 12
- 235000014962 Streptococcus cremoris Nutrition 0.000 description 12
- 238000006243 chemical reaction Methods 0.000 description 12
- 210000000349 chromosome Anatomy 0.000 description 12
- 108091036078 conserved sequence Proteins 0.000 description 12
- 238000010353 genetic engineering Methods 0.000 description 12
- 230000010354 integration Effects 0.000 description 12
- 108090000765 processed proteins & peptides Proteins 0.000 description 12
- 102000004196 processed proteins & peptides Human genes 0.000 description 12
- 238000012546 transfer Methods 0.000 description 12
- 241000194041 Lactococcus lactis subsp. lactis Species 0.000 description 11
- 235000014969 Streptococcus diacetilactis Nutrition 0.000 description 11
- 230000000694 effects Effects 0.000 description 11
- 238000000855 fermentation Methods 0.000 description 11
- 230000004151 fermentation Effects 0.000 description 11
- 229920001184 polypeptide Polymers 0.000 description 11
- 241000186660 Lactobacillus Species 0.000 description 10
- 241000194035 Lactococcus lactis Species 0.000 description 9
- 235000014897 Streptococcus lactis Nutrition 0.000 description 9
- 230000006870 function Effects 0.000 description 9
- 230000001603 reducing effect Effects 0.000 description 9
- 101100438439 Escherichia coli (strain K12) ygbT gene Proteins 0.000 description 8
- 244000199885 Lactobacillus bulgaricus Species 0.000 description 8
- 240000002605 Lactobacillus helveticus Species 0.000 description 8
- 235000013967 Lactobacillus helveticus Nutrition 0.000 description 8
- 241000194036 Lactococcus Species 0.000 description 8
- 101100329497 Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1) cas2 gene Proteins 0.000 description 8
- 125000000539 amino acid group Chemical group 0.000 description 8
- 239000003242 anti bacterial agent Substances 0.000 description 8
- 101150000705 cas1 gene Proteins 0.000 description 8
- 238000010367 cloning Methods 0.000 description 8
- 230000003247 decreasing effect Effects 0.000 description 8
- 229940054346 lactobacillus helveticus Drugs 0.000 description 8
- 239000003550 marker Substances 0.000 description 8
- 238000002360 preparation method Methods 0.000 description 8
- 230000035945 sensitivity Effects 0.000 description 8
- 238000006467 substitution reaction Methods 0.000 description 8
- 230000004083 survival effect Effects 0.000 description 8
- 240000001046 Lactobacillus acidophilus Species 0.000 description 7
- 108060004795 Methyltransferase Proteins 0.000 description 7
- 230000037430 deletion Effects 0.000 description 7
- 238000012217 deletion Methods 0.000 description 7
- 230000007613 environmental effect Effects 0.000 description 7
- 238000002744 homologous recombination Methods 0.000 description 7
- 230000006801 homologous recombination Effects 0.000 description 7
- 235000013336 milk Nutrition 0.000 description 7
- 239000008267 milk Substances 0.000 description 7
- 210000004080 milk Anatomy 0.000 description 7
- 239000000126 substance Substances 0.000 description 7
- KDXKERNSBIXSRK-YFKPBYRVSA-N L-lysine Chemical compound NCCCC[C@H](N)C(O)=O KDXKERNSBIXSRK-YFKPBYRVSA-N 0.000 description 6
- 235000013956 Lactobacillus acidophilus Nutrition 0.000 description 6
- 235000013960 Lactobacillus bulgaricus Nutrition 0.000 description 6
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 description 6
- 108091034117 Oligonucleotide Proteins 0.000 description 6
- 238000007792 addition Methods 0.000 description 6
- 229940088710 antibiotic agent Drugs 0.000 description 6
- 238000013459 approach Methods 0.000 description 6
- 230000015572 biosynthetic process Effects 0.000 description 6
- 239000003795 chemical substances by application Substances 0.000 description 6
- 101150118300 cos gene Proteins 0.000 description 6
- 235000014048 cultured milk product Nutrition 0.000 description 6
- 229940039695 lactobacillus acidophilus Drugs 0.000 description 6
- 230000002101 lytic effect Effects 0.000 description 6
- 108010092681 DNA Primase Proteins 0.000 description 5
- 241000194033 Enterococcus Species 0.000 description 5
- 241000588722 Escherichia Species 0.000 description 5
- COLNVLDHVKWLRT-QMMMGPOBSA-N L-phenylalanine Chemical compound OC(=O)[C@@H](N)CC1=CC=CC=C1 COLNVLDHVKWLRT-QMMMGPOBSA-N 0.000 description 5
- 241000192132 Leuconostoc Species 0.000 description 5
- 239000004472 Lysine Substances 0.000 description 5
- 241001465754 Metazoa Species 0.000 description 5
- 241000192001 Pediococcus Species 0.000 description 5
- 101710172711 Structural protein Proteins 0.000 description 5
- 239000002253 acid Substances 0.000 description 5
- 239000002537 cosmetic Substances 0.000 description 5
- 239000000463 material Substances 0.000 description 5
- 239000011159 matrix material Substances 0.000 description 5
- 239000002609 medium Substances 0.000 description 5
- 238000010369 molecular cloning Methods 0.000 description 5
- 230000035772 mutation Effects 0.000 description 5
- 230000008569 process Effects 0.000 description 5
- 238000003786 synthesis reaction Methods 0.000 description 5
- 230000009466 transformation Effects 0.000 description 5
- 235000014101 wine Nutrition 0.000 description 5
- 241000193830 Bacillus <bacterium> Species 0.000 description 4
- 241000186000 Bifidobacterium Species 0.000 description 4
- 102000016559 DNA Primase Human genes 0.000 description 4
- ULGZDMOVFRHVEP-RWJQBGPGSA-N Erythromycin Chemical compound O([C@@H]1[C@@H](C)C(=O)O[C@@H]([C@@]([C@H](O)[C@@H](C)C(=O)[C@H](C)C[C@@](C)(O)[C@H](O[C@H]2[C@@H]([C@H](C[C@@H](C)O2)N(C)C)O)[C@H]1C)(C)O)CC)[C@H]1C[C@@](C)(OC)[C@@H](O)[C@H](C)O1 ULGZDMOVFRHVEP-RWJQBGPGSA-N 0.000 description 4
- 241000588724 Escherichia coli Species 0.000 description 4
- 241000282326 Felis catus Species 0.000 description 4
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 4
- 244000199866 Lactobacillus casei Species 0.000 description 4
- 235000013958 Lactobacillus casei Nutrition 0.000 description 4
- 241000186429 Propionibacterium Species 0.000 description 4
- 241000191940 Staphylococcus Species 0.000 description 4
- 241000700605 Viruses Species 0.000 description 4
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 4
- 230000003321 amplification Effects 0.000 description 4
- 230000002939 deleterious effect Effects 0.000 description 4
- 235000021107 fermented food Nutrition 0.000 description 4
- 235000012041 food component Nutrition 0.000 description 4
- 239000005417 food ingredient Substances 0.000 description 4
- 235000013376 functional food Nutrition 0.000 description 4
- 230000012010 growth Effects 0.000 description 4
- 229940017800 lactobacillus casei Drugs 0.000 description 4
- 230000001320 lysogenic effect Effects 0.000 description 4
- 244000005700 microbiome Species 0.000 description 4
- 238000003199 nucleic acid amplification method Methods 0.000 description 4
- 229960005190 phenylalanine Drugs 0.000 description 4
- 244000144977 poultry Species 0.000 description 4
- 235000013594 poultry meat Nutrition 0.000 description 4
- 230000001105 regulatory effect Effects 0.000 description 4
- 238000009877 rendering Methods 0.000 description 4
- 238000001890 transfection Methods 0.000 description 4
- 235000013311 vegetables Nutrition 0.000 description 4
- 241000451942 Abutilon sonneratianum Species 0.000 description 3
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 3
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 3
- 241000901050 Bifidobacterium animalis subsp. lactis Species 0.000 description 3
- 241000186146 Brevibacterium Species 0.000 description 3
- 241000193403 Clostridium Species 0.000 description 3
- 241000196324 Embryophyta Species 0.000 description 3
- 241000588698 Erwinia Species 0.000 description 3
- 241000282412 Homo Species 0.000 description 3
- 240000006024 Lactobacillus plantarum Species 0.000 description 3
- 235000013965 Lactobacillus plantarum Nutrition 0.000 description 3
- 241000589248 Legionella Species 0.000 description 3
- 208000007764 Legionnaires' Disease Diseases 0.000 description 3
- 241001627205 Leuconostoc sp. Species 0.000 description 3
- 241000186781 Listeria Species 0.000 description 3
- 241000186359 Mycobacterium Species 0.000 description 3
- 241000588653 Neisseria Species 0.000 description 3
- 241000191996 Pediococcus pentosaceus Species 0.000 description 3
- 108010043958 Peptoids Proteins 0.000 description 3
- 241000607142 Salmonella Species 0.000 description 3
- 241001217892 Streptococcus thermophilus CNRZ1066 Species 0.000 description 3
- 241000079831 Streptococcus thermophilus LMG 18311 Species 0.000 description 3
- 241000589886 Treponema Species 0.000 description 3
- 241000607734 Yersinia <bacteria> Species 0.000 description 3
- 235000015173 baked goods and baking mixes Nutrition 0.000 description 3
- 229940009289 bifidobacterium lactis Drugs 0.000 description 3
- 235000015155 buttermilk Nutrition 0.000 description 3
- 238000004113 cell culture Methods 0.000 description 3
- 235000013339 cereals Nutrition 0.000 description 3
- 230000002759 chromosomal effect Effects 0.000 description 3
- 238000004590 computer program Methods 0.000 description 3
- 239000012141 concentrate Substances 0.000 description 3
- 235000015142 cultured sour cream Nutrition 0.000 description 3
- 239000007789 gas Substances 0.000 description 3
- 239000001963 growth medium Substances 0.000 description 3
- 229940039696 lactobacillus Drugs 0.000 description 3
- 229940072205 lactobacillus plantarum Drugs 0.000 description 3
- 235000013622 meat product Nutrition 0.000 description 3
- 230000001404 mediated effect Effects 0.000 description 3
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 3
- 230000037361 pathway Effects 0.000 description 3
- 239000008188 pellet Substances 0.000 description 3
- 239000000843 powder Substances 0.000 description 3
- 239000006041 probiotic Substances 0.000 description 3
- 230000000529 probiotic effect Effects 0.000 description 3
- 235000018291 probiotics Nutrition 0.000 description 3
- 230000005070 ripening Effects 0.000 description 3
- 238000012163 sequencing technique Methods 0.000 description 3
- 238000002741 site-directed mutagenesis Methods 0.000 description 3
- 239000007787 solid Substances 0.000 description 3
- 230000001131 transforming effect Effects 0.000 description 3
- MYPYJXKWCTUITO-UHFFFAOYSA-N vancomycin Natural products O1C(C(=C2)Cl)=CC=C2C(O)C(C(NC(C2=CC(O)=CC(O)=C2C=2C(O)=CC=C3C=2)C(O)=O)=O)NC(=O)C3NC(=O)C2NC(=O)C(CC(N)=O)NC(=O)C(NC(=O)C(CC(C)C)NC)C(O)C(C=C3Cl)=CC=C3OC3=CC2=CC1=C3OC1OC(CO)C(O)C(O)C1OC1CC(C)(N)C(O)C(C)O1 MYPYJXKWCTUITO-UHFFFAOYSA-N 0.000 description 3
- 241000589291 Acinetobacter Species 0.000 description 2
- 241000567147 Aeropyrum Species 0.000 description 2
- 108020005544 Antisense RNA Proteins 0.000 description 2
- 241000207208 Aquifex Species 0.000 description 2
- 241000205046 Archaeoglobus Species 0.000 description 2
- 241000589876 Campylobacter Species 0.000 description 2
- 241000191366 Chlorobium Species 0.000 description 2
- 241000588881 Chromobacterium Species 0.000 description 2
- 108091026890 Coding region Proteins 0.000 description 2
- 108020004705 Codon Proteins 0.000 description 2
- 241000186216 Corynebacterium Species 0.000 description 2
- 102000053602 DNA Human genes 0.000 description 2
- 238000007399 DNA isolation Methods 0.000 description 2
- 239000003155 DNA primer Substances 0.000 description 2
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 description 2
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 description 2
- 241000605716 Desulfovibrio Species 0.000 description 2
- 102000004190 Enzymes Human genes 0.000 description 2
- 108090000790 Enzymes Proteins 0.000 description 2
- 241000605909 Fusobacterium Species 0.000 description 2
- 241001135750 Geobacter Species 0.000 description 2
- 239000004471 Glycine Substances 0.000 description 2
- 108010006464 Hemolysin Proteins Proteins 0.000 description 2
- LRQKBLKVPFOOQJ-YFKPBYRVSA-N L-norleucine Chemical compound CCCC[C@H]([NH3+])C([O-])=O LRQKBLKVPFOOQJ-YFKPBYRVSA-N 0.000 description 2
- OUYCCCASQSFEME-QMMMGPOBSA-N L-tyrosine Chemical compound OC(=O)[C@@H](N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-QMMMGPOBSA-N 0.000 description 2
- 240000001929 Lactobacillus brevis Species 0.000 description 2
- 235000013957 Lactobacillus brevis Nutrition 0.000 description 2
- 241000186673 Lactobacillus delbrueckii Species 0.000 description 2
- 241000186606 Lactobacillus gasseri Species 0.000 description 2
- 235000001252 Lactococcus lactis subsp lactis bv diacetylactis Nutrition 0.000 description 2
- 241000168725 Lactococcus lactis subsp. lactis bv. diacetylactis Species 0.000 description 2
- 244000172809 Leuconostoc cremoris Species 0.000 description 2
- 235000017632 Leuconostoc cremoris Nutrition 0.000 description 2
- 241000192130 Leuconostoc mesenteroides Species 0.000 description 2
- 240000002129 Malva sylvestris Species 0.000 description 2
- 235000006770 Malva sylvestris Nutrition 0.000 description 2
- 241000202974 Methanobacterium Species 0.000 description 2
- 241000203353 Methanococcus Species 0.000 description 2
- 241000204675 Methanopyrus Species 0.000 description 2
- 241000205276 Methanosarcina Species 0.000 description 2
- 101100166122 Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) cas1-4 gene Proteins 0.000 description 2
- 241000589345 Methylococcus Species 0.000 description 2
- 241000204031 Mycoplasma Species 0.000 description 2
- 241000863420 Myxococcus Species 0.000 description 2
- LRHPLDYGYMQRHN-UHFFFAOYSA-N N-Butanol Chemical compound CCCCO LRHPLDYGYMQRHN-UHFFFAOYSA-N 0.000 description 2
- 241000605122 Nitrosomonas Species 0.000 description 2
- 241000202223 Oenococcus Species 0.000 description 2
- 241000606860 Pasteurella Species 0.000 description 2
- 241000607568 Photobacterium Species 0.000 description 2
- 241000204826 Picrophilus Species 0.000 description 2
- 241000605894 Porphyromonas Species 0.000 description 2
- 241000589516 Pseudomonas Species 0.000 description 2
- 241000205160 Pyrococcus Species 0.000 description 2
- 241000702202 Siphoviridae Species 0.000 description 2
- 241000193996 Streptococcus pyogenes Species 0.000 description 2
- 241000187747 Streptomyces Species 0.000 description 2
- 241000205101 Sulfolobus Species 0.000 description 2
- 239000004098 Tetracycline Substances 0.000 description 2
- 241000186339 Thermoanaerobacter Species 0.000 description 2
- 241000204667 Thermoplasma Species 0.000 description 2
- 241000204652 Thermotoga Species 0.000 description 2
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical compound O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 description 2
- 108010046377 Whey Proteins Proteins 0.000 description 2
- 102000007544 Whey Proteins Human genes 0.000 description 2
- 241000605941 Wolinella Species 0.000 description 2
- 101150100833 aacC3 gene Proteins 0.000 description 2
- 230000002378 acidificating effect Effects 0.000 description 2
- DZBUGLKDJFMEHC-UHFFFAOYSA-N acridine Chemical group C1=CC=CC2=CC3=CC=CC=C3N=C21 DZBUGLKDJFMEHC-UHFFFAOYSA-N 0.000 description 2
- 230000008901 benefit Effects 0.000 description 2
- 235000013361 beverage Nutrition 0.000 description 2
- 230000027455 binding Effects 0.000 description 2
- 230000004071 biological effect Effects 0.000 description 2
- 230000008827 biological function Effects 0.000 description 2
- 235000014121 butter Nutrition 0.000 description 2
- 238000004364 calculation method Methods 0.000 description 2
- 210000000170 cell membrane Anatomy 0.000 description 2
- 210000003850 cellular structure Anatomy 0.000 description 2
- 239000013599 cloning vector Substances 0.000 description 2
- 230000015271 coagulation Effects 0.000 description 2
- 238000005345 coagulation Methods 0.000 description 2
- 239000003184 complementary RNA Substances 0.000 description 2
- 235000015140 cultured milk Nutrition 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
- 230000006866 deterioration Effects 0.000 description 2
- 235000015872 dietary supplement Nutrition 0.000 description 2
- XBDQKXXYIPTUBI-UHFFFAOYSA-N dimethylselenoniopropionate Natural products CCC(O)=O XBDQKXXYIPTUBI-UHFFFAOYSA-N 0.000 description 2
- 238000009826 distribution Methods 0.000 description 2
- 229960003276 erythromycin Drugs 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 239000013604 expression vector Substances 0.000 description 2
- 239000000796 flavoring agent Substances 0.000 description 2
- 235000019634 flavors Nutrition 0.000 description 2
- 238000009472 formulation Methods 0.000 description 2
- 235000015203 fruit juice Nutrition 0.000 description 2
- 230000036541 health Effects 0.000 description 2
- 239000003228 hemolysin Substances 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 238000011081 inoculation Methods 0.000 description 2
- 230000003993 interaction Effects 0.000 description 2
- 235000013372 meat Nutrition 0.000 description 2
- 230000007246 mechanism Effects 0.000 description 2
- BDAGIHXWWSANSR-UHFFFAOYSA-N methanoic acid Natural products OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 2
- 230000000813 microbial effect Effects 0.000 description 2
- 238000009629 microbiological culture Methods 0.000 description 2
- 235000020124 milk-based beverage Nutrition 0.000 description 2
- 238000002515 oligonucleotide synthesis Methods 0.000 description 2
- 230000000737 periodic effect Effects 0.000 description 2
- 239000000825 pharmaceutical preparation Substances 0.000 description 2
- 229940127557 pharmaceutical product Drugs 0.000 description 2
- COLNVLDHVKWLRT-UHFFFAOYSA-N phenylalanine Natural products OC(=O)C(N)CC1=CC=CC=C1 COLNVLDHVKWLRT-UHFFFAOYSA-N 0.000 description 2
- 108091033319 polynucleotide Proteins 0.000 description 2
- 102000040430 polynucleotide Human genes 0.000 description 2
- 239000002157 polynucleotide Substances 0.000 description 2
- 230000000644 propagated effect Effects 0.000 description 2
- 238000000746 purification Methods 0.000 description 2
- 108700015182 recombinant rCAS Proteins 0.000 description 2
- 230000009467 reduction Effects 0.000 description 2
- 230000003252 repetitive effect Effects 0.000 description 2
- 238000002864 sequence alignment Methods 0.000 description 2
- 239000013605 shuttle vector Substances 0.000 description 2
- 238000000638 solvent extraction Methods 0.000 description 2
- UCSJYZPVAKXKNQ-HZYVHMACSA-N streptomycin Chemical compound CN[C@H]1[C@H](O)[C@@H](O)[C@H](CO)O[C@H]1O[C@@H]1[C@](C=O)(O)[C@H](C)O[C@H]1O[C@@H]1[C@@H](NC(N)=N)[C@H](O)[C@@H](NC(N)=N)[C@H](O)[C@H]1O UCSJYZPVAKXKNQ-HZYVHMACSA-N 0.000 description 2
- 239000013589 supplement Substances 0.000 description 2
- 238000012360 testing method Methods 0.000 description 2
- 229960002180 tetracycline Drugs 0.000 description 2
- 229930101283 tetracycline Natural products 0.000 description 2
- 235000019364 tetracycline Nutrition 0.000 description 2
- 150000003522 tetracyclines Chemical class 0.000 description 2
- 239000003053 toxin Substances 0.000 description 2
- 231100000765 toxin Toxicity 0.000 description 2
- 108700012359 toxins Proteins 0.000 description 2
- 230000002463 transducing effect Effects 0.000 description 2
- 238000011144 upstream manufacturing Methods 0.000 description 2
- 101150108686 vanR gene Proteins 0.000 description 2
- 229960003165 vancomycin Drugs 0.000 description 2
- MYPYJXKWCTUITO-LYRMYLQWSA-N vancomycin Chemical compound O([C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC1=C2C=C3C=C1OC1=CC=C(C=C1Cl)[C@@H](O)[C@H](C(N[C@@H](CC(N)=O)C(=O)N[C@H]3C(=O)N[C@H]1C(=O)N[C@H](C(N[C@@H](C3=CC(O)=CC(O)=C3C=3C(O)=CC=C1C=3)C(O)=O)=O)[C@H](O)C1=CC=C(C(=C1)Cl)O2)=O)NC(=O)[C@@H](CC(C)C)NC)[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1 MYPYJXKWCTUITO-LYRMYLQWSA-N 0.000 description 2
- 230000001018 virulence Effects 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- 235000008924 yoghurt drink Nutrition 0.000 description 2
- MTCFGRXMJLQNBG-REOHCLBHSA-N (2S)-2-Amino-3-hydroxypropansäure Chemical compound OC[C@H](N)C(O)=O MTCFGRXMJLQNBG-REOHCLBHSA-N 0.000 description 1
- ZDRLKQLULCHOAJ-SECBINFHSA-N (2S)-2-amino-2,3,3-trifluoro-3-(4-hydroxyphenyl)propanoic acid Chemical compound FC([C@](N)(C(=O)O)F)(C1=CC=C(C=C1)O)F ZDRLKQLULCHOAJ-SECBINFHSA-N 0.000 description 1
- IYKLZBIWFXPUCS-VIFPVBQESA-N (2s)-2-(naphthalen-1-ylamino)propanoic acid Chemical compound C1=CC=C2C(N[C@@H](C)C(O)=O)=CC=CC2=C1 IYKLZBIWFXPUCS-VIFPVBQESA-N 0.000 description 1
- WNNNWFKQCKFSDK-BYPYZUCNSA-N (2s)-2-aminopent-4-enoic acid Chemical compound OC(=O)[C@@H](N)CC=C WNNNWFKQCKFSDK-BYPYZUCNSA-N 0.000 description 1
- GTVVZTAFGPQSPC-QMMMGPOBSA-N (2s)-2-azaniumyl-3-(4-nitrophenyl)propanoate Chemical compound OC(=O)[C@@H](N)CC1=CC=C([N+]([O-])=O)C=C1 GTVVZTAFGPQSPC-QMMMGPOBSA-N 0.000 description 1
- BWKMGYQJPOAASG-VIFPVBQESA-N (3s)-1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid Chemical compound C1=CC=C2CN[C@H](C(=O)O)CC2=C1 BWKMGYQJPOAASG-VIFPVBQESA-N 0.000 description 1
- PXFBZOLANLWPMH-UHFFFAOYSA-N 16-Epiaffinine Natural products C1C(C2=CC=CC=C2N2)=C2C(=O)CC2C(=CC)CN(C)C1C2CO PXFBZOLANLWPMH-UHFFFAOYSA-N 0.000 description 1
- BLCJBICVQSYOIF-UHFFFAOYSA-N 2,2-diaminobutanoic acid Chemical compound CCC(N)(N)C(O)=O BLCJBICVQSYOIF-UHFFFAOYSA-N 0.000 description 1
- WTOFYLAWDLQMBZ-UHFFFAOYSA-N 2-azaniumyl-3-thiophen-2-ylpropanoate Chemical compound OC(=O)C(N)CC1=CC=CS1 WTOFYLAWDLQMBZ-UHFFFAOYSA-N 0.000 description 1
- OSWFIVFLDKOXQC-UHFFFAOYSA-N 4-(3-methoxyphenyl)aniline Chemical compound COC1=CC=CC(C=2C=CC(N)=CC=2)=C1 OSWFIVFLDKOXQC-UHFFFAOYSA-N 0.000 description 1
- FWMNVWWHGCHHJJ-SKKKGAJSSA-N 4-amino-1-[(2r)-6-amino-2-[[(2r)-2-[[(2r)-2-[[(2r)-2-amino-3-phenylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]hexanoyl]piperidine-4-carboxylic acid Chemical compound C([C@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@H](CCCCN)C(=O)N1CCC(N)(CC1)C(O)=O)NC(=O)[C@H](N)CC=1C=CC=CC=1)C1=CC=CC=C1 FWMNVWWHGCHHJJ-SKKKGAJSSA-N 0.000 description 1
- NIGWMJHCCYYCSF-QMMMGPOBSA-N 4-chloro-L-phenylalanine Chemical compound OC(=O)[C@@H](N)CC1=CC=C(Cl)C=C1 NIGWMJHCCYYCSF-QMMMGPOBSA-N 0.000 description 1
- TVEXGJYMHHTVKP-UHFFFAOYSA-N 6-oxabicyclo[3.2.1]oct-3-en-7-one Chemical compound C1C2C(=O)OC1C=CC2 TVEXGJYMHHTVKP-UHFFFAOYSA-N 0.000 description 1
- XDOLZJYETYVRKV-UHFFFAOYSA-N 7-Aminoheptanoic acid Chemical compound NCCCCCCC(O)=O XDOLZJYETYVRKV-UHFFFAOYSA-N 0.000 description 1
- 241000023308 Acca Species 0.000 description 1
- 101100214700 Acinetobacter baumannii aacC2 gene Proteins 0.000 description 1
- 241000251468 Actinopterygii Species 0.000 description 1
- 241000589158 Agrobacterium Species 0.000 description 1
- GUBGYTABKSRVRQ-XLOQQCSPSA-N Alpha-Lactose Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-XLOQQCSPSA-N 0.000 description 1
- 241000192542 Anabaena Species 0.000 description 1
- 241000203069 Archaea Species 0.000 description 1
- 239000004475 Arginine Substances 0.000 description 1
- DCXYFEDJOCDNAF-UHFFFAOYSA-N Asparagine Natural products OC(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-N 0.000 description 1
- 235000007319 Avena orientalis Nutrition 0.000 description 1
- 244000075850 Avena orientalis Species 0.000 description 1
- 241000194108 Bacillus licheniformis Species 0.000 description 1
- 235000008636 Bacillus subtilis subsp natto Nutrition 0.000 description 1
- 244000075779 Bacillus subtilis subsp natto Species 0.000 description 1
- 108010001478 Bacitracin Proteins 0.000 description 1
- DWRXFEITVBNRMK-UHFFFAOYSA-N Beta-D-1-Arabinofuranosylthymine Natural products O=C1NC(=O)C(C)=CN1C1C(O)C(O)C(CO)O1 DWRXFEITVBNRMK-UHFFFAOYSA-N 0.000 description 1
- 241001608472 Bifidobacterium longum Species 0.000 description 1
- 241000186015 Bifidobacterium longum subsp. infantis Species 0.000 description 1
- 241000588807 Bordetella Species 0.000 description 1
- 241000589968 Borrelia Species 0.000 description 1
- 240000007124 Brassica oleracea Species 0.000 description 1
- 235000003899 Brassica oleracea var acephala Nutrition 0.000 description 1
- 235000011301 Brassica oleracea var capitata Nutrition 0.000 description 1
- 235000001169 Brassica oleracea var oleracea Nutrition 0.000 description 1
- 241000589562 Brucella Species 0.000 description 1
- 108010018956 CTP synthetase Proteins 0.000 description 1
- 235000002566 Capsicum Nutrition 0.000 description 1
- 241001508458 Clostridium saccharoperbutylacetonicum Species 0.000 description 1
- 108010078777 Colistin Proteins 0.000 description 1
- 241000701520 Corticoviridae Species 0.000 description 1
- 241000186226 Corynebacterium glutamicum Species 0.000 description 1
- 241000238424 Crustacea Species 0.000 description 1
- 240000008067 Cucumis sativus Species 0.000 description 1
- 235000009849 Cucumis sativus Nutrition 0.000 description 1
- 241000702221 Cystoviridae Species 0.000 description 1
- 108010054814 DNA Gyrase Proteins 0.000 description 1
- 238000000018 DNA microarray Methods 0.000 description 1
- 239000003298 DNA probe Substances 0.000 description 1
- 102100022286 DNA repair-scaffolding protein Human genes 0.000 description 1
- 230000004543 DNA replication Effects 0.000 description 1
- 238000001712 DNA sequencing Methods 0.000 description 1
- 238000007900 DNA-DNA hybridization Methods 0.000 description 1
- 230000004568 DNA-binding Effects 0.000 description 1
- 108090000626 DNA-directed RNA polymerases Proteins 0.000 description 1
- 102000004163 DNA-directed RNA polymerases Human genes 0.000 description 1
- 244000000626 Daucus carota Species 0.000 description 1
- 235000002767 Daucus carota Nutrition 0.000 description 1
- 229920002307 Dextran Polymers 0.000 description 1
- 241000194032 Enterococcus faecalis Species 0.000 description 1
- 101100049034 Enterococcus faecalis (strain ATCC 700802 / V583) vanXB gene Proteins 0.000 description 1
- 101100102350 Enterococcus faecium vanH gene Proteins 0.000 description 1
- 108700039887 Essential Genes Proteins 0.000 description 1
- 108060002716 Exonuclease Proteins 0.000 description 1
- 241000589601 Francisella Species 0.000 description 1
- WHUUTDBJXJRKMK-UHFFFAOYSA-N Glutamic acid Natural products OC(=O)C(N)CCC(O)=O WHUUTDBJXJRKMK-UHFFFAOYSA-N 0.000 description 1
- 241000606790 Haemophilus Species 0.000 description 1
- 241000606768 Haemophilus influenzae Species 0.000 description 1
- 241000204988 Haloferax mediterranei Species 0.000 description 1
- 241000589989 Helicobacter Species 0.000 description 1
- 101700012268 Holin Proteins 0.000 description 1
- 101000825159 Homo sapiens DNA repair-scaffolding protein Proteins 0.000 description 1
- 240000005979 Hordeum vulgare Species 0.000 description 1
- 235000007340 Hordeum vulgare Nutrition 0.000 description 1
- PMMYEEVYMWASQN-DMTCNVIQSA-N Hydroxyproline Chemical compound O[C@H]1CN[C@H](C(O)=O)C1 PMMYEEVYMWASQN-DMTCNVIQSA-N 0.000 description 1
- 241000702394 Inoviridae Species 0.000 description 1
- 108091092195 Intron Proteins 0.000 description 1
- 241000588748 Klebsiella Species 0.000 description 1
- 241000588747 Klebsiella pneumoniae Species 0.000 description 1
- SNDPXSYFESPGGJ-BYPYZUCNSA-N L-2-aminopentanoic acid Chemical compound CCC[C@H](N)C(O)=O SNDPXSYFESPGGJ-BYPYZUCNSA-N 0.000 description 1
- AHLPHDHHMVZTML-BYPYZUCNSA-N L-Ornithine Chemical compound NCCC[C@H](N)C(O)=O AHLPHDHHMVZTML-BYPYZUCNSA-N 0.000 description 1
- QNAYBMKLOCPYGJ-REOHCLBHSA-N L-alanine Chemical compound C[C@H](N)C(O)=O QNAYBMKLOCPYGJ-REOHCLBHSA-N 0.000 description 1
- QWCKQJZIFLGMSD-VKHMYHEASA-N L-alpha-aminobutyric acid Chemical compound CC[C@H](N)C(O)=O QWCKQJZIFLGMSD-VKHMYHEASA-N 0.000 description 1
- ZGUNAGUHMKGQNY-ZETCQYMHSA-N L-alpha-phenylglycine zwitterion Chemical compound OC(=O)[C@@H](N)C1=CC=CC=C1 ZGUNAGUHMKGQNY-ZETCQYMHSA-N 0.000 description 1
- ODKSFYDXXFIFQN-BYPYZUCNSA-P L-argininium(2+) Chemical compound NC(=[NH2+])NCCC[C@H]([NH3+])C(O)=O ODKSFYDXXFIFQN-BYPYZUCNSA-P 0.000 description 1
- DCXYFEDJOCDNAF-REOHCLBHSA-N L-asparagine Chemical compound OC(=O)[C@@H](N)CC(N)=O DCXYFEDJOCDNAF-REOHCLBHSA-N 0.000 description 1
- CKLJMWTZIZZHCS-REOHCLBHSA-N L-aspartic acid Chemical compound OC(=O)[C@@H](N)CC(O)=O CKLJMWTZIZZHCS-REOHCLBHSA-N 0.000 description 1
- WHUUTDBJXJRKMK-VKHMYHEASA-N L-glutamic acid Chemical compound OC(=O)[C@@H](N)CCC(O)=O WHUUTDBJXJRKMK-VKHMYHEASA-N 0.000 description 1
- ZDXPYRJPNDTMRX-VKHMYHEASA-N L-glutamine Chemical compound OC(=O)[C@@H](N)CCC(N)=O ZDXPYRJPNDTMRX-VKHMYHEASA-N 0.000 description 1
- AGPKZVBTJJNPAG-WHFBIAKZSA-N L-isoleucine Chemical compound CC[C@H](C)[C@H](N)C(O)=O AGPKZVBTJJNPAG-WHFBIAKZSA-N 0.000 description 1
- ROHFNLRQFUQHCH-YFKPBYRVSA-N L-leucine Chemical compound CC(C)C[C@H](N)C(O)=O ROHFNLRQFUQHCH-YFKPBYRVSA-N 0.000 description 1
- UCUNFLYVYCGDHP-BYPYZUCNSA-N L-methionine sulfone Chemical compound CS(=O)(=O)CC[C@H](N)C(O)=O UCUNFLYVYCGDHP-BYPYZUCNSA-N 0.000 description 1
- UCUNFLYVYCGDHP-UHFFFAOYSA-N L-methionine sulfone Natural products CS(=O)(=O)CCC(N)C(O)=O UCUNFLYVYCGDHP-UHFFFAOYSA-N 0.000 description 1
- SNDPXSYFESPGGJ-UHFFFAOYSA-N L-norVal-OH Natural products CCCC(N)C(O)=O SNDPXSYFESPGGJ-UHFFFAOYSA-N 0.000 description 1
- DZLNHFMRPBPULJ-VKHMYHEASA-N L-thioproline Chemical compound OC(=O)[C@@H]1CSCN1 DZLNHFMRPBPULJ-VKHMYHEASA-N 0.000 description 1
- AYFVYJQAPQTCCC-GBXIJSLDSA-N L-threonine Chemical compound C[C@@H](O)[C@H](N)C(O)=O AYFVYJQAPQTCCC-GBXIJSLDSA-N 0.000 description 1
- KZSNJWFQEVHDMF-BYPYZUCNSA-N L-valine Chemical compound CC(C)[C@H](N)C(O)=O KZSNJWFQEVHDMF-BYPYZUCNSA-N 0.000 description 1
- 241001134659 Lactobacillus curvatus Species 0.000 description 1
- 241001147746 Lactobacillus delbrueckii subsp. lactis Species 0.000 description 1
- 241001468157 Lactobacillus johnsonii Species 0.000 description 1
- 241000186605 Lactobacillus paracasei Species 0.000 description 1
- 241000186604 Lactobacillus reuteri Species 0.000 description 1
- 241000186612 Lactobacillus sakei Species 0.000 description 1
- 241000186869 Lactobacillus salivarius Species 0.000 description 1
- GUBGYTABKSRVRQ-QKKXKWKRSA-N Lactose Natural products OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)C(O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O GUBGYTABKSRVRQ-QKKXKWKRSA-N 0.000 description 1
- ROHFNLRQFUQHCH-UHFFFAOYSA-N Leucine Natural products CC(C)CC(N)C(O)=O ROHFNLRQFUQHCH-UHFFFAOYSA-N 0.000 description 1
- 241000714210 Leviviridae Species 0.000 description 1
- 108090000364 Ligases Proteins 0.000 description 1
- 102000003960 Ligases Human genes 0.000 description 1
- 235000007688 Lycopersicon esculentum Nutrition 0.000 description 1
- 208000016604 Lyme disease Diseases 0.000 description 1
- 101150052154 MSRA1 gene Proteins 0.000 description 1
- 241000144155 Microbacterium ammoniaphilum Species 0.000 description 1
- 241000192041 Micrococcus Species 0.000 description 1
- 241000702318 Microviridae Species 0.000 description 1
- 241000588621 Moraxella Species 0.000 description 1
- 241000588655 Moraxella catarrhalis Species 0.000 description 1
- 101100476480 Mus musculus S100a8 gene Proteins 0.000 description 1
- 241000187479 Mycobacterium tuberculosis Species 0.000 description 1
- 241000701553 Myoviridae Species 0.000 description 1
- 108091005461 Nucleic proteins Chemical group 0.000 description 1
- 241000192134 Oenococcus oeni Species 0.000 description 1
- 108700026244 Open Reading Frames Proteins 0.000 description 1
- AHLPHDHHMVZTML-UHFFFAOYSA-N Orn-delta-NH2 Natural products NCCCC(N)C(O)=O AHLPHDHHMVZTML-UHFFFAOYSA-N 0.000 description 1
- UTJLXEIPEHZYQJ-UHFFFAOYSA-N Ornithine Natural products OC(=O)C(C)CCCN UTJLXEIPEHZYQJ-UHFFFAOYSA-N 0.000 description 1
- 240000007594 Oryza sativa Species 0.000 description 1
- 235000007164 Oryza sativa Nutrition 0.000 description 1
- 238000012408 PCR amplification Methods 0.000 description 1
- 241000194105 Paenibacillus polymyxa Species 0.000 description 1
- 108091081548 Palindromic sequence Proteins 0.000 description 1
- 241000758706 Piperaceae Species 0.000 description 1
- 241000702072 Podoviridae Species 0.000 description 1
- 108010039918 Polylysine Chemical group 0.000 description 1
- 108010040201 Polymyxins Proteins 0.000 description 1
- ONIBWKKTOPOVIA-UHFFFAOYSA-N Proline Natural products OC(=O)C1CCCN1 ONIBWKKTOPOVIA-UHFFFAOYSA-N 0.000 description 1
- 101710150114 Protein rep Proteins 0.000 description 1
- 241000588769 Proteus <enterobacteria> Species 0.000 description 1
- 241000588770 Proteus mirabilis Species 0.000 description 1
- 241000589517 Pseudomonas aeruginosa Species 0.000 description 1
- 241000205226 Pyrobaculum Species 0.000 description 1
- 108020004518 RNA Probes Proteins 0.000 description 1
- 239000003391 RNA probe Substances 0.000 description 1
- 101710152114 Replication protein Proteins 0.000 description 1
- 241000209056 Secale Species 0.000 description 1
- 235000007238 Secale cereale Nutrition 0.000 description 1
- 238000012300 Sequence Analysis Methods 0.000 description 1
- MTCFGRXMJLQNBG-UHFFFAOYSA-N Serine Natural products OCC(N)C(O)=O MTCFGRXMJLQNBG-UHFFFAOYSA-N 0.000 description 1
- 241000607768 Shigella Species 0.000 description 1
- 240000003768 Solanum lycopersicum Species 0.000 description 1
- 241000191967 Staphylococcus aureus Species 0.000 description 1
- 241000191963 Staphylococcus epidermidis Species 0.000 description 1
- 241001147691 Staphylococcus saprophyticus Species 0.000 description 1
- 241001234013 Staphylococcus vitulinus Species 0.000 description 1
- 241000191973 Staphylococcus xylosus Species 0.000 description 1
- 241000193998 Streptococcus pneumoniae Species 0.000 description 1
- 241001517319 Streptococcus thermophilus DGCC 7710 Species 0.000 description 1
- 229930006000 Sucrose Natural products 0.000 description 1
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 description 1
- 241000701521 Tectiviridae Species 0.000 description 1
- 244000299461 Theobroma cacao Species 0.000 description 1
- 235000009470 Theobroma cacao Nutrition 0.000 description 1
- 241000589596 Thermus Species 0.000 description 1
- 241000051160 Thermus thermophilus HB27 Species 0.000 description 1
- RYYWUUFWQRZTIU-UHFFFAOYSA-N Thiophosphoric acid Chemical group OP(O)(S)=O RYYWUUFWQRZTIU-UHFFFAOYSA-N 0.000 description 1
- AYFVYJQAPQTCCC-UHFFFAOYSA-N Threonine Natural products CC(O)C(N)C(O)=O AYFVYJQAPQTCCC-UHFFFAOYSA-N 0.000 description 1
- 239000004473 Threonine Substances 0.000 description 1
- 108010022394 Threonine synthase Proteins 0.000 description 1
- 102000005497 Thymidylate Synthase Human genes 0.000 description 1
- 108010020764 Transposases Proteins 0.000 description 1
- 235000021307 Triticum Nutrition 0.000 description 1
- 244000098338 Triticum aestivum Species 0.000 description 1
- KZSNJWFQEVHDMF-UHFFFAOYSA-N Valine Natural products CC(C)C(N)C(O)=O KZSNJWFQEVHDMF-UHFFFAOYSA-N 0.000 description 1
- 108010059993 Vancomycin Proteins 0.000 description 1
- 241000607598 Vibrio Species 0.000 description 1
- 239000005862 Whey Substances 0.000 description 1
- 241000589634 Xanthomonas Species 0.000 description 1
- 240000008042 Zea mays Species 0.000 description 1
- 235000005824 Zea mays ssp. parviglumis Nutrition 0.000 description 1
- 235000002017 Zea mays subsp mays Nutrition 0.000 description 1
- 101150016019 aacA4 gene Proteins 0.000 description 1
- 101150014550 aadB gene Proteins 0.000 description 1
- 235000011054 acetic acid Nutrition 0.000 description 1
- 150000007513 acids Chemical class 0.000 description 1
- 230000004913 activation Effects 0.000 description 1
- 235000004279 alanine Nutrition 0.000 description 1
- 125000000217 alkyl group Chemical group 0.000 description 1
- 229940124277 aminobutyric acid Drugs 0.000 description 1
- 229960002684 aminocaproic acid Drugs 0.000 description 1
- 229960000723 ampicillin Drugs 0.000 description 1
- AVKUERGKIZMTKX-NJBDSQKTSA-N ampicillin Chemical compound C1([C@@H](N)C(=O)N[C@H]2[C@H]3SC([C@@H](N3C2=O)C(O)=O)(C)C)=CC=CC=C1 AVKUERGKIZMTKX-NJBDSQKTSA-N 0.000 description 1
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 description 1
- 235000009582 asparagine Nutrition 0.000 description 1
- 229960001230 asparagine Drugs 0.000 description 1
- 235000003704 aspartic acid Nutrition 0.000 description 1
- 229960003071 bacitracin Drugs 0.000 description 1
- 229930184125 bacitracin Natural products 0.000 description 1
- CLKOFPXJLQSYAH-ABRJDSQDSA-N bacitracin A Chemical compound C1SC([C@@H](N)[C@@H](C)CC)=N[C@@H]1C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](CCC(O)=O)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H]1C(=O)N[C@H](CCCN)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@H](CC=2C=CC=CC=2)C(=O)N[C@@H](CC=2N=CNC=2)C(=O)N[C@H](CC(O)=O)C(=O)N[C@@H](CC(N)=O)C(=O)NCCCC1 CLKOFPXJLQSYAH-ABRJDSQDSA-N 0.000 description 1
- 210000003578 bacterial chromosome Anatomy 0.000 description 1
- 230000008970 bacterial immunity Effects 0.000 description 1
- 230000004888 barrier function Effects 0.000 description 1
- 235000015278 beef Nutrition 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 239000003781 beta lactamase inhibitor Substances 0.000 description 1
- IQFYYKKMVGJFEH-UHFFFAOYSA-N beta-L-thymidine Natural products O=C1NC(=O)C(C)=CN1C1OC(CO)C(O)C1 IQFYYKKMVGJFEH-UHFFFAOYSA-N 0.000 description 1
- OQFSQFPPLPISGP-UHFFFAOYSA-N beta-carboxyaspartic acid Natural products OC(=O)C(N)C(C(O)=O)C(O)=O OQFSQFPPLPISGP-UHFFFAOYSA-N 0.000 description 1
- 229940126813 beta-lactamase inhibitor Drugs 0.000 description 1
- 229940004120 bifidobacterium infantis Drugs 0.000 description 1
- 229940009291 bifidobacterium longum Drugs 0.000 description 1
- 230000033228 biological regulation Effects 0.000 description 1
- 239000011575 calcium Substances 0.000 description 1
- 239000001506 calcium phosphate Substances 0.000 description 1
- 229910000389 calcium phosphate Inorganic materials 0.000 description 1
- 235000011010 calcium phosphates Nutrition 0.000 description 1
- 238000004422 calculation algorithm Methods 0.000 description 1
- 239000002775 capsule Substances 0.000 description 1
- 101150058049 car gene Proteins 0.000 description 1
- 229910052799 carbon Inorganic materials 0.000 description 1
- 239000005018 casein Substances 0.000 description 1
- BECPQYXYKAMYBN-UHFFFAOYSA-N casein, tech. Chemical compound NCCCCC(C(O)=O)N=C(O)C(CC(O)=O)N=C(O)C(CCC(O)=N)N=C(O)C(CC(C)C)N=C(O)C(CCC(O)=O)N=C(O)C(CC(O)=O)N=C(O)C(CCC(O)=O)N=C(O)C(C(C)O)N=C(O)C(CCC(O)=N)N=C(O)C(CCC(O)=N)N=C(O)C(CCC(O)=N)N=C(O)C(CCC(O)=O)N=C(O)C(CCC(O)=O)N=C(O)C(COP(O)(O)=O)N=C(O)C(CCC(O)=N)N=C(O)C(N)CC1=CC=CC=C1 BECPQYXYKAMYBN-UHFFFAOYSA-N 0.000 description 1
- 235000021240 caseins Nutrition 0.000 description 1
- 230000001413 cellular effect Effects 0.000 description 1
- 238000005119 centrifugation Methods 0.000 description 1
- 230000008859 change Effects 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- 238000007621 cluster analysis Methods 0.000 description 1
- 229960003346 colistin Drugs 0.000 description 1
- 239000002299 complementary DNA Substances 0.000 description 1
- 235000009508 confectionery Nutrition 0.000 description 1
- 230000001268 conjugating effect Effects 0.000 description 1
- 238000011109 contamination Methods 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 235000005822 corn Nutrition 0.000 description 1
- 238000012258 culturing Methods 0.000 description 1
- 235000018417 cysteine Nutrition 0.000 description 1
- XUJNEKJLAYXESH-UHFFFAOYSA-N cysteine Natural products SCC(N)C(O)=O XUJNEKJLAYXESH-UHFFFAOYSA-N 0.000 description 1
- 230000009089 cytolysis Effects 0.000 description 1
- 230000006378 damage Effects 0.000 description 1
- 101150084095 ddpX gene Proteins 0.000 description 1
- 230000007423 decrease Effects 0.000 description 1
- 230000007547 defect Effects 0.000 description 1
- 238000013461 design Methods 0.000 description 1
- 238000011161 development Methods 0.000 description 1
- 239000003085 diluting agent Substances 0.000 description 1
- 235000013399 edible fruits Nutrition 0.000 description 1
- 238000004520 electroporation Methods 0.000 description 1
- 230000001804 emulsifying effect Effects 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 239000003623 enhancer Substances 0.000 description 1
- 229940032049 enterococcus faecalis Drugs 0.000 description 1
- 230000006862 enzymatic digestion Effects 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- 102000013165 exonuclease Human genes 0.000 description 1
- 235000021105 fermented cheese Nutrition 0.000 description 1
- 238000001914 filtration Methods 0.000 description 1
- 235000013332 fish product Nutrition 0.000 description 1
- 235000019253 formic acid Nutrition 0.000 description 1
- 108020001507 fusion proteins Proteins 0.000 description 1
- 102000037865 fusion proteins Human genes 0.000 description 1
- 235000013922 glutamic acid Nutrition 0.000 description 1
- 239000004220 glutamic acid Substances 0.000 description 1
- ZDXPYRJPNDTMRX-UHFFFAOYSA-N glutamine Natural products OC(=O)C(N)CCC(N)=O ZDXPYRJPNDTMRX-UHFFFAOYSA-N 0.000 description 1
- 239000008187 granular material Substances 0.000 description 1
- 235000019674 grape juice Nutrition 0.000 description 1
- 229940047650 haemophilus influenzae Drugs 0.000 description 1
- 150000004820 halides Chemical class 0.000 description 1
- 235000011617 hard cheese Nutrition 0.000 description 1
- 230000008821 health effect Effects 0.000 description 1
- 238000009396 hybridization Methods 0.000 description 1
- 230000002209 hydrophobic effect Effects 0.000 description 1
- 238000012405 in silico analysis Methods 0.000 description 1
- 238000000338 in vitro Methods 0.000 description 1
- 238000001727 in vivo Methods 0.000 description 1
- 230000002779 inactivation Effects 0.000 description 1
- 230000002458 infectious effect Effects 0.000 description 1
- 239000004615 ingredient Substances 0.000 description 1
- 230000000977 initiatory effect Effects 0.000 description 1
- 239000002054 inoculum Substances 0.000 description 1
- 229910052500 inorganic mineral Inorganic materials 0.000 description 1
- 230000009545 invasion Effects 0.000 description 1
- 229960000310 isoleucine Drugs 0.000 description 1
- AGPKZVBTJJNPAG-UHFFFAOYSA-N isoleucine Natural products CCC(C)C(N)C(O)=O AGPKZVBTJJNPAG-UHFFFAOYSA-N 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 235000015141 kefir Nutrition 0.000 description 1
- 235000015138 kumis Nutrition 0.000 description 1
- 229940004208 lactobacillus bulgaricus Drugs 0.000 description 1
- 229940001882 lactobacillus reuteri Drugs 0.000 description 1
- 239000008101 lactose Substances 0.000 description 1
- 235000021374 legumes Nutrition 0.000 description 1
- 244000144972 livestock Species 0.000 description 1
- 238000012423 maintenance Methods 0.000 description 1
- 108020004999 messenger RNA Proteins 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- YACKEPLHDIMKIO-UHFFFAOYSA-N methylphosphonic acid Chemical compound CP(O)(O)=O YACKEPLHDIMKIO-UHFFFAOYSA-N 0.000 description 1
- 244000000010 microbial pathogen Species 0.000 description 1
- 239000002480 mineral oil Substances 0.000 description 1
- 238000012544 monitoring process Methods 0.000 description 1
- 101150021123 msrA gene Proteins 0.000 description 1
- 101150114366 msrA2 gene Proteins 0.000 description 1
- 101150006794 msrAB gene Proteins 0.000 description 1
- 101150109310 msrAB1 gene Proteins 0.000 description 1
- 101150052209 msrAB2 gene Proteins 0.000 description 1
- 238000002887 multiple sequence alignment Methods 0.000 description 1
- 238000002703 mutagenesis Methods 0.000 description 1
- 231100000350 mutagenesis Toxicity 0.000 description 1
- LWGJTAZLEJHCPA-UHFFFAOYSA-N n-(2-chloroethyl)-n-nitrosomorpholine-4-carboxamide Chemical compound ClCCN(N=O)C(=O)N1CCOCC1 LWGJTAZLEJHCPA-UHFFFAOYSA-N 0.000 description 1
- JORAUNFTUVJTNG-BSTBCYLQSA-N n-[(2s)-4-amino-1-[[(2s,3r)-1-[[(2s)-4-amino-1-oxo-1-[[(3s,6s,9s,12s,15r,18s,21s)-6,9,18-tris(2-aminoethyl)-3-[(1r)-1-hydroxyethyl]-12,15-bis(2-methylpropyl)-2,5,8,11,14,17,20-heptaoxo-1,4,7,10,13,16,19-heptazacyclotricos-21-yl]amino]butan-2-yl]amino]-3-h Chemical compound CC(C)CCCCC(=O)N[C@@H](CCN)C(=O)N[C@H]([C@@H](C)O)CN[C@@H](CCN)C(=O)N[C@H]1CCNC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](CCN)NC(=O)[C@H](CCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](CC(C)C)NC(=O)[C@H](CCN)NC1=O.CCC(C)CCCCC(=O)N[C@@H](CCN)C(=O)N[C@H]([C@@H](C)O)CN[C@@H](CCN)C(=O)N[C@H]1CCNC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](CCN)NC(=O)[C@H](CCN)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](CC(C)C)NC(=O)[C@H](CCN)NC1=O JORAUNFTUVJTNG-BSTBCYLQSA-N 0.000 description 1
- 235000013557 nattō Nutrition 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 125000004433 nitrogen atom Chemical group N* 0.000 description 1
- 235000016709 nutrition Nutrition 0.000 description 1
- 229940124276 oligodeoxyribonucleotide Drugs 0.000 description 1
- 229960003104 ornithine Drugs 0.000 description 1
- 235000021116 parmesan Nutrition 0.000 description 1
- 239000002245 particle Substances 0.000 description 1
- 235000015927 pasta Nutrition 0.000 description 1
- 230000001717 pathogenic effect Effects 0.000 description 1
- 230000035515 penetration Effects 0.000 description 1
- 239000008194 pharmaceutical composition Substances 0.000 description 1
- 230000035790 physiological processes and functions Effects 0.000 description 1
- 229920000656 polylysine Chemical group 0.000 description 1
- 102000054765 polymorphisms of proteins Human genes 0.000 description 1
- XDJYMJULXQKGMM-UHFFFAOYSA-N polymyxin E1 Natural products CCC(C)CCCCC(=O)NC(CCN)C(=O)NC(C(C)O)C(=O)NC(CCN)C(=O)NC1CCNC(=O)C(C(C)O)NC(=O)C(CCN)NC(=O)C(CCN)NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)C(CCN)NC1=O XDJYMJULXQKGMM-UHFFFAOYSA-N 0.000 description 1
- KNIWPHSUTGNZST-UHFFFAOYSA-N polymyxin E2 Natural products CC(C)CCCCC(=O)NC(CCN)C(=O)NC(C(C)O)C(=O)NC(CCN)C(=O)NC1CCNC(=O)C(C(C)O)NC(=O)C(CCN)NC(=O)C(CCN)NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)C(CCN)NC1=O KNIWPHSUTGNZST-UHFFFAOYSA-N 0.000 description 1
- 235000015277 pork Nutrition 0.000 description 1
- 239000002987 primer (paints) Substances 0.000 description 1
- 101150046501 proB gene Proteins 0.000 description 1
- 210000001236 prokaryotic cell Anatomy 0.000 description 1
- 235000019260 propionic acid Nutrition 0.000 description 1
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 101150054232 pyrG gene Proteins 0.000 description 1
- 230000004147 pyrimidine metabolism Effects 0.000 description 1
- IUVKMZGDUIUOCP-BTNSXGMBSA-N quinbolone Chemical compound O([C@H]1CC[C@H]2[C@H]3[C@@H]([C@]4(C=CC(=O)C=C4CC3)C)CC[C@@]21C)C1=CCCC1 IUVKMZGDUIUOCP-BTNSXGMBSA-N 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 108091008146 restriction endonucleases Proteins 0.000 description 1
- 230000000717 retained effect Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 235000009566 rice Nutrition 0.000 description 1
- 235000014102 seafood Nutrition 0.000 description 1
- 235000014214 soft drink Nutrition 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 230000002269 spontaneous effect Effects 0.000 description 1
- 229940031000 streptococcus pneumoniae Drugs 0.000 description 1
- 229960005322 streptomycin Drugs 0.000 description 1
- 239000005720 sucrose Substances 0.000 description 1
- 239000003826 tablet Substances 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- 235000013616 tea Nutrition 0.000 description 1
- 101150061166 tetR gene Proteins 0.000 description 1
- 238000002560 therapeutic procedure Methods 0.000 description 1
- 229940104230 thymidine Drugs 0.000 description 1
- FGMPLJWBKKVCDB-UHFFFAOYSA-N trans-L-hydroxy-proline Natural products ON1CCCC1C(O)=O FGMPLJWBKKVCDB-UHFFFAOYSA-N 0.000 description 1
- 238000010361 transduction Methods 0.000 description 1
- 230000026683 transduction Effects 0.000 description 1
- 238000013519 translation Methods 0.000 description 1
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 1
- OUYCCCASQSFEME-UHFFFAOYSA-N tyrosine Natural products OC(=O)C(N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-UHFFFAOYSA-N 0.000 description 1
- 241001148471 unidentified anaerobic bacterium Species 0.000 description 1
- 239000004474 valine Substances 0.000 description 1
- 101150114434 vanA gene Proteins 0.000 description 1
- 101150096103 vanX gene Proteins 0.000 description 1
- 235000015112 vegetable and seed oil Nutrition 0.000 description 1
- 239000008158 vegetable oil Substances 0.000 description 1
- 230000035899 viability Effects 0.000 description 1
- 235000015139 viili Nutrition 0.000 description 1
- 230000029812 viral genome replication Effects 0.000 description 1
- 235000021119 whey protein Nutrition 0.000 description 1
- 235000020138 yakult Nutrition 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
- C12N15/746—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora for lactic acid bacteria (Streptococcus; Lactococcus; Lactobacillus; Pediococcus; Enterococcus; Leuconostoc; Propionibacterium; Bifidobacterium; Sporolactobacillus)
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K20/00—Accessory food factors for animal feeding-stuffs
- A23K20/10—Organic substances
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23L—FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES, NOT OTHERWISE PROVIDED FOR; PREPARATION OR TREATMENT THEREOF
- A23L33/00—Modifying nutritive qualities of foods; Dietetic products; Preparation or treatment thereof
- A23L33/10—Modifying nutritive qualities of foods; Dietetic products; Preparation or treatment thereof using additives
- A23L33/135—Bacteria or derivatives thereof, e.g. probiotics
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23V—INDEXING SCHEME RELATING TO FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES AND LACTIC OR PROPIONIC ACID BACTERIA USED IN FOODSTUFFS OR FOOD PREPARATION
- A23V2002/00—Food compositions, function of food ingredients or processes for food or foodstuffs
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Genetics & Genomics (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- General Health & Medical Sciences (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Biomedical Technology (AREA)
- Immunology (AREA)
- Polymers & Plastics (AREA)
- Plant Pathology (AREA)
- Food Science & Technology (AREA)
- Virology (AREA)
- Animal Husbandry (AREA)
- Mycology (AREA)
- Nutrition Science (AREA)
- Public Health (AREA)
- Veterinary Medicine (AREA)
- Medicinal Chemistry (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- Pharmacology & Pharmacy (AREA)
- Animal Behavior & Ethology (AREA)
- Communicable Diseases (AREA)
- General Chemical & Material Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Oncology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Abstract
La présente invention concerne l'utilisation d'un ou de plusieurs gènes cas pour moduler la résistance à l'intérieur d'une cellule vis-à-vis d'un acide nucléique cible ou d'un produit de transcription de celui-ci.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CA2961849A CA2961849C (fr) | 2005-08-26 | 2006-08-25 | Utilisation de genes associes a crispr-cas |
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US71139605P | 2005-08-26 | 2005-08-26 | |
US60/711,396 | 2005-08-26 | ||
US74768306P | 2006-05-19 | 2006-05-19 | |
US60/747,683 | 2006-05-19 | ||
PCT/US2006/033167 WO2007025097A2 (fr) | 2005-08-26 | 2006-08-25 | Utilisation |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CA2961849A Division CA2961849C (fr) | 2005-08-26 | 2006-08-25 | Utilisation de genes associes a crispr-cas |
Publications (2)
Publication Number | Publication Date |
---|---|
CA2619833A1 CA2619833A1 (fr) | 2007-03-01 |
CA2619833C true CA2619833C (fr) | 2017-05-09 |
Family
ID=37692491
Family Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CA2619833A Active CA2619833C (fr) | 2005-08-26 | 2006-08-25 | Utilisation de genes associes a crispr-cas |
CA2961849A Active CA2961849C (fr) | 2005-08-26 | 2006-08-25 | Utilisation de genes associes a crispr-cas |
Family Applications After (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CA2961849A Active CA2961849C (fr) | 2005-08-26 | 2006-08-25 | Utilisation de genes associes a crispr-cas |
Country Status (12)
Country | Link |
---|---|
US (4) | US10066233B2 (fr) |
EP (5) | EP1916903B1 (fr) |
AT (1) | ATE473637T1 (fr) |
AU (1) | AU2006282983B2 (fr) |
CA (2) | CA2619833C (fr) |
DE (1) | DE602006015484D1 (fr) |
DK (5) | DK2341149T3 (fr) |
ES (1) | ES2398918T3 (fr) |
NZ (2) | NZ565563A (fr) |
PL (1) | PL2325332T3 (fr) |
PT (1) | PT1916903E (fr) |
WO (1) | WO2007025097A2 (fr) |
Families Citing this family (274)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CA2619833C (fr) | 2005-08-26 | 2017-05-09 | Danisco A/S | Utilisation de genes associes a crispr-cas |
DK2426220T3 (en) * | 2006-05-19 | 2016-09-26 | Dupont Nutrition Biosci Aps | Labeled microorganisms, and methods for labeling |
PL2034848T3 (pl) | 2006-06-16 | 2017-08-31 | Dupont Nutrition Bioscences Aps | Bakteria Streptococcus thermophilus |
AU2013234432B2 (en) * | 2007-03-02 | 2015-09-24 | Dupont Nutrition Biosciences Aps | Cultures with improved phage resistance |
US20110002889A1 (en) | 2007-03-02 | 2011-01-06 | Rodolphe Barrangou | Cultures with Improved Phage Resistance |
WO2010011961A2 (fr) | 2008-07-25 | 2010-01-28 | University Of Georgia Research Foundation, Inc. | Système procaryote arni-like et ses procédés d'utilisation |
WO2010054108A2 (fr) * | 2008-11-06 | 2010-05-14 | University Of Georgia Research Foundation, Inc. | Polypeptides cas6 et procédés d'utilisation |
EP2362915B1 (fr) | 2008-11-07 | 2016-12-21 | DuPont Nutrition Biosciences ApS | Séquences crispr de bifidobactéries |
WO2010067148A1 (fr) * | 2008-12-11 | 2010-06-17 | Danisco A/S | Compositions bactériennes de staphylococcus vitulinus présentant une activité de nitrate réductase et de bactéries lactiques, et procédés utilisant ces compositions |
US20120164275A1 (en) | 2009-09-01 | 2012-06-28 | Chr. Hansen A/S | Lactic bacterium with modified galactokinase expression for texturizing food products by overexpression of exopolysaccharide |
JP5905834B2 (ja) | 2010-01-28 | 2016-04-20 | セーホーエル.ハンセン アクティーゼルスカブ | ファージ耐性に基づいて選択された食品に質感を加えるための乳酸菌 |
EP2569425B1 (fr) | 2010-05-10 | 2016-07-06 | The Regents of The University of California | Compositions d'endoribonucléases et leurs procédés d'utilisation |
EP2630156B1 (fr) | 2010-10-20 | 2018-08-22 | DuPont Nutrition Biosciences ApS | Sequences crispr-cas de lactococcus |
EP2630265B1 (fr) | 2010-10-22 | 2017-03-22 | Chr. Hansen A/S | Souches de bactéries lactiques texturantes |
CN102172278B (zh) * | 2011-01-21 | 2015-08-12 | 吉林紫鑫药物研究有限公司 | 一种制备果蔬发酵转化液的方法 |
US20140113376A1 (en) | 2011-06-01 | 2014-04-24 | Rotem Sorek | Compositions and methods for downregulating prokaryotic genes |
WO2013066438A2 (fr) | 2011-07-22 | 2013-05-10 | President And Fellows Of Harvard College | Évaluation et amélioration de la spécificité de clivage des nucléases |
PH12014501360B1 (en) | 2011-12-16 | 2022-05-20 | Targetgene Biotechnologies Ltd | Compositions and methods for modifying a predetermined target nucleic acid sequence |
GB201122458D0 (en) | 2011-12-30 | 2012-02-08 | Univ Wageningen | Modified cascade ribonucleoproteins and uses thereof |
WO2013141680A1 (fr) * | 2012-03-20 | 2013-09-26 | Vilnius University | Clivage d'adn dirigé par arn par le complexe cas9-arncr |
US9637739B2 (en) * | 2012-03-20 | 2017-05-02 | Vilnius University | RNA-directed DNA cleavage by the Cas9-crRNA complex |
LT2800811T (lt) | 2012-05-25 | 2017-09-11 | The Regents Of The University Of California | Būdai ir kompozicijos, skirti tikslinės dnr modifikavimui, panaudojant adresuotą rnr, ir transkripcijos moduliavimui, panaudojant adresuotą rnr |
PT3138912T (pt) | 2012-12-06 | 2018-12-28 | Sigma Aldrich Co Llc | Modificação e regulação de genoma baseado em crispr |
SG11201504523UA (en) | 2012-12-12 | 2015-07-30 | Broad Inst Inc | Delivery, engineering and optimization of systems, methods and compositions for sequence manipulation and therapeutic applications |
ES2786193T3 (es) | 2012-12-12 | 2020-10-09 | Broad Inst Inc | Modificación por tecnología genética y optimización de sistemas, métodos y composiciones enzimáticas mejorados para la manipulación de secuencias |
RU2701662C9 (ru) * | 2012-12-12 | 2019-10-31 | Те Брод Инститьют, Инк. | Компоненты системы crispr-cas, способы и композиции для манипуляции с последовательностями |
ES2701749T3 (es) | 2012-12-12 | 2019-02-25 | Broad Inst Inc | Métodos, modelos, sistemas y aparatos para identificar secuencias diana para enzimas Cas o sistemas CRISPR-Cas para secuencias diana y transmitir resultados de los mismos |
CN105121641A (zh) | 2012-12-17 | 2015-12-02 | 哈佛大学校长及研究员协会 | Rna-引导的人类基因组工程化 |
AU2014207618A1 (en) | 2013-01-16 | 2015-08-06 | Emory University | Cas9-nucleic acid complexes and uses related thereto |
US11135273B2 (en) | 2013-02-07 | 2021-10-05 | The Rockefeller University | Sequence specific antimicrobials |
WO2014124226A1 (fr) | 2013-02-07 | 2014-08-14 | The Rockefeller University | Antimicrobiens spécifiques d'une séquence |
ES2522765B2 (es) * | 2013-02-22 | 2015-03-18 | Universidad De Alicante | Método para dectectar inserciones de espaciadores en estructuras CRISPR |
US10612043B2 (en) | 2013-03-09 | 2020-04-07 | Agilent Technologies, Inc. | Methods of in vivo engineering of large sequences using multiple CRISPR/cas selections of recombineering events |
UA123532C2 (uk) | 2013-03-12 | 2021-04-21 | Е. І. Дю Пон Де Немур Енд Компані | Спосіб ідентифікації варіантного сайта розпізнавання для сконструйованого засобу, що рідко розщеплює, для індукції двониткового розриву |
US9803214B2 (en) | 2013-03-12 | 2017-10-31 | Pioneer Hi-Bred International, Inc. | Breeding pair of wheat plants comprising an MS45 promoter inverted repeat that confers male sterility and a construct that restores fertility |
EP3620534B1 (fr) | 2013-03-14 | 2021-10-13 | Caribou Biosciences, Inc. | Crispr-cas compositions pour des acides nucléiques à ciblage d'acide nucléique |
US9234213B2 (en) | 2013-03-15 | 2016-01-12 | System Biosciences, Llc | Compositions and methods directed to CRISPR/Cas genomic engineering systems |
US10760064B2 (en) | 2013-03-15 | 2020-09-01 | The General Hospital Corporation | RNA-guided targeting of genetic and epigenomic regulatory proteins to specific genomic loci |
WO2014152432A2 (fr) | 2013-03-15 | 2014-09-25 | The General Hospital Corporation | Direction, par guidage arn, de protéines régulatrices génétiques et épigénomiques vers des loci génomiques spécifiques |
CN115261411A (zh) * | 2013-04-04 | 2022-11-01 | 哈佛学院校长同事会 | 利用CRISPR/Cas系统的基因组编辑的治疗性用途 |
US9902973B2 (en) | 2013-04-11 | 2018-02-27 | Caribou Biosciences, Inc. | Methods of modifying a target nucleic acid with an argonaute |
KR20240172759A (ko) | 2013-06-17 | 2024-12-10 | 더 브로드 인스티튜트, 인코퍼레이티드 | 간의 표적화 및 치료를 위한 CRISPRCas 시스템, 벡터 및 조성물의 전달 및 용도 |
WO2014204727A1 (fr) | 2013-06-17 | 2014-12-24 | The Broad Institute Inc. | Génomique fonctionnelle utilisant des systèmes crispr-cas, procédés de composition, cribles et applications de ces derniers |
ES2777217T3 (es) | 2013-06-17 | 2020-08-04 | Broad Inst Inc | Suministro, modificación y optimización de sistemas de guía en tándem, métodos y composiciones para la manipulación de secuencias |
CA2915795C (fr) | 2013-06-17 | 2021-07-13 | The Broad Institute, Inc. | Procede de traitement de dechets organiques destine a fournir un engraisa liberation lente |
JP6738729B2 (ja) * | 2013-06-17 | 2020-08-12 | ザ・ブロード・インスティテュート・インコーポレイテッド | 分裂終了細胞の疾患および障害をターゲティングおよびモデリングするための系、方法および組成物の送達、エンジニアリングおよび最適化 |
AU2014281027A1 (en) | 2013-06-17 | 2016-01-28 | Massachusetts Institute Of Technology | Optimized CRISPR-Cas double nickase systems, methods and compositions for sequence manipulation |
US10011850B2 (en) | 2013-06-21 | 2018-07-03 | The General Hospital Corporation | Using RNA-guided FokI Nucleases (RFNs) to increase specificity for RNA-Guided Genome Editing |
WO2015006498A2 (fr) | 2013-07-09 | 2015-01-15 | President And Fellows Of Harvard College | Utilisations thérapeutiques d'édition du génome avec des systèmes crispr/cas |
CN103388006B (zh) * | 2013-07-26 | 2015-10-28 | 华东师范大学 | 一种基因定点突变的构建方法 |
US9163284B2 (en) | 2013-08-09 | 2015-10-20 | President And Fellows Of Harvard College | Methods for identifying a target site of a Cas9 nuclease |
BR112016003561B8 (pt) | 2013-08-22 | 2022-11-01 | Du Pont | Método para a produção de uma modificação genética, método para a introdução de um polinucleotídeo de interesse no genoma de uma planta, método para a edição de um segundo gene em um genoma de planta e método para gerar uma planta de milho resistente ao glifosato |
US9359599B2 (en) | 2013-08-22 | 2016-06-07 | President And Fellows Of Harvard College | Engineered transcription activator-like effector (TALE) domains and uses thereof |
EP3041498B1 (fr) * | 2013-09-05 | 2022-02-16 | Massachusetts Institute of Technology | Réglage de populations microbiennes à l'aide de nucléases programmables |
US9388430B2 (en) | 2013-09-06 | 2016-07-12 | President And Fellows Of Harvard College | Cas9-recombinase fusion proteins and uses thereof |
US9228207B2 (en) | 2013-09-06 | 2016-01-05 | President And Fellows Of Harvard College | Switchable gRNAs comprising aptamers |
US9526784B2 (en) | 2013-09-06 | 2016-12-27 | President And Fellows Of Harvard College | Delivery system for functional nucleases |
US10584358B2 (en) | 2013-10-30 | 2020-03-10 | North Carolina State University | Compositions and methods related to a type-II CRISPR-Cas system in Lactobacillus buchneri |
DK3066201T3 (en) | 2013-11-07 | 2018-06-06 | Editas Medicine Inc | CRISPR-RELATED PROCEDURES AND COMPOSITIONS WITH LEADING GRADES |
RU2016125246A (ru) | 2013-11-27 | 2018-01-09 | Е. И. Дюпон Де Немур Энд Компани | Генетические локусы, связанные с реакцией на абиотический стресс |
WO2015089364A1 (fr) | 2013-12-12 | 2015-06-18 | The Broad Institute Inc. | Structure cristalline d'un système crispr-cas, et ses utilisations |
US20150166985A1 (en) | 2013-12-12 | 2015-06-18 | President And Fellows Of Harvard College | Methods for correcting von willebrand factor point mutations |
SG10201804975PA (en) | 2013-12-12 | 2018-07-30 | Broad Inst Inc | Delivery, Use and Therapeutic Applications of the Crispr-Cas Systems and Compositions for HBV and Viral Diseases and Disorders |
BR112016013520A2 (pt) | 2013-12-12 | 2017-10-03 | Broad Inst Inc | Composições e métodos de uso de sistemas crispr-cas em distúrbios de repetições de nucleotídeos |
WO2015089486A2 (fr) | 2013-12-12 | 2015-06-18 | The Broad Institute Inc. | Systèmes, procédés et compositions pour manipulation de séquences avec systèmes crispr-cas fonctionnels optimisés |
EP3653229A1 (fr) | 2013-12-12 | 2020-05-20 | The Broad Institute, Inc. | Distribution, utilisation et applications thérapeutiques des systèmes crispr-cas et compositions pour l'édition du génome |
MX375420B (es) | 2014-02-11 | 2025-03-06 | The Regents Of The Univ Of Colorado A Body Corporate | Ingenieria genetica multiplexada habilitada por crispr. |
EP3105325B2 (fr) | 2014-02-13 | 2024-10-23 | Takara Bio USA, Inc. | Procédés d'appauvrissement d'une molécule cible d'une ensemble initial d'acides nucléiques, et compositions et kits pour la mise en oeuvre de ceux-ci |
HUE051354T2 (hu) | 2014-04-14 | 2021-03-01 | Nemesis Bioscience Ltd | Terapeutikum |
AU2015280069B2 (en) | 2014-06-23 | 2021-08-12 | The General Hospital Corporation | Genomewide unbiased identification of dsbs evaluated by sequencing (guide-seq) |
AU2015288157A1 (en) | 2014-07-11 | 2017-01-19 | E. I. Du Pont De Nemours And Company | Compositions and methods for producing plants resistant to glyphosate herbicide |
CA2956224A1 (fr) | 2014-07-30 | 2016-02-11 | President And Fellows Of Harvard College | Proteines cas9 comprenant des inteines dependant de ligands |
US20170218384A1 (en) | 2014-08-08 | 2017-08-03 | Pioneer Hi-Bred International, Inc. | Ubiquitin promoters and introns and methods of use |
US10513711B2 (en) | 2014-08-13 | 2019-12-24 | Dupont Us Holding, Llc | Genetic targeting in non-conventional yeast using an RNA-guided endonuclease |
US11071289B2 (en) | 2014-08-14 | 2021-07-27 | Biocytogen Boston Corp | DNA knock-in system |
US11274317B2 (en) | 2014-09-05 | 2022-03-15 | Vilnius University | Targeted RNA knockdown and knockout by type III-A Csm complexes |
WO2016035044A1 (fr) * | 2014-09-05 | 2016-03-10 | Vilnius University | Défibrage programmable de l'arn par le système cas-crispr de type iii-a de streptococcus thermophilus |
CN108064129A (zh) | 2014-09-12 | 2018-05-22 | 纳幕尔杜邦公司 | 玉米和大豆中复合性状基因座的位点特异性整合位点的产生和使用方法 |
CA2963693A1 (fr) | 2014-10-10 | 2016-04-14 | Editas Medicine, Inc. | Compositions et procedes pour activer une reparation dirigee par homologie |
EP3215623A4 (fr) | 2014-11-06 | 2018-09-26 | President and Fellows of Harvard College | Cellules ne présentant pas d'expression en surface de b2m et procédés pour l'administration allogène de ces cellules |
KR102424721B1 (ko) | 2014-11-06 | 2022-07-25 | 이 아이 듀폰 디 네모아 앤드 캄파니 | Rna-유도 엔도뉴클레아제의 세포 내로의 펩티드 매개성 전달 |
WO2016073990A2 (fr) | 2014-11-07 | 2016-05-12 | Editas Medicine, Inc. | Procédés pour améliorer l'édition génomique médiée par crispr/cas |
EP3224353B9 (fr) | 2014-11-26 | 2023-08-09 | Technology Innovation Momentum Fund (Israel) Limited Partnership | Élimination ciblée de gènes bactériens |
CN116059378A (zh) | 2014-12-10 | 2023-05-05 | 明尼苏达大学董事会 | 用于治疗疾病的遗传修饰的细胞、组织和器官 |
EP3889260A1 (fr) | 2014-12-12 | 2021-10-06 | The Broad Institute, Inc. | Arn guides protégés (pgrnas) |
WO2016100309A1 (fr) | 2014-12-16 | 2016-06-23 | Pioneer Hi-Bred International, Inc. | Rétablissement de la fertilité mâle dans le blé |
CA2971462A1 (fr) | 2015-02-04 | 2016-08-11 | Pioneer Hi-Bred International, Inc. | Nouveaux recepteurs de toxine btet procedes d'utilisation |
WO2016137774A1 (fr) | 2015-02-25 | 2016-09-01 | Pioneer Hi-Bred International Inc | Composition et procédés pour la régulation de l'expression d'un complexe arn guide/endonucléase cas |
US10202589B2 (en) | 2015-03-03 | 2019-02-12 | The General Hospital Corporation | Engineered CRISPR-Cas9 nucleases with altered PAM specificity |
EP3274460A1 (fr) | 2015-03-27 | 2018-01-31 | E. I. du Pont de Nemours and Company | Promoteurs de gène d'arn nucléaire de petite taille u6 de soja et leur utilisation dans l'expression constitutive de gènes d'arn de petite taille dans des plantes |
WO2016176617A2 (fr) | 2015-04-29 | 2016-11-03 | New York University | Procédé pour le traitement de gliomes de haut grade |
ES2905525T3 (es) | 2015-05-06 | 2022-04-11 | Snipr Tech Ltd | Alteración de poblaciones microbianas y modificación de la microbiota |
US20180142251A1 (en) | 2015-05-06 | 2018-05-24 | Pioneer Hi-Bred International, Inc. | Methods and compositions for the production of unreduced, non-recombined gametes and clonal offspring |
AU2016261600B2 (en) | 2015-05-08 | 2021-09-23 | President And Fellows Of Harvard College | Universal donor stem cells and related methods |
US11390884B2 (en) | 2015-05-11 | 2022-07-19 | Editas Medicine, Inc. | Optimized CRISPR/cas9 systems and methods for gene editing in stem cells |
CN107849546A (zh) | 2015-05-15 | 2018-03-27 | 先锋国际良种公司 | 对cas内切核酸酶系统、pam序列和指导rna元件的快速表征 |
CA2986262A1 (fr) | 2015-06-09 | 2016-12-15 | Editas Medicine, Inc. | Procedes lies a crispr/cas et compositions d'amelioration de la transplantation |
CN107771218B (zh) | 2015-06-17 | 2021-12-31 | 先锋国际良种公司 | 植物调节元件及其使用方法 |
WO2016205759A1 (fr) | 2015-06-18 | 2016-12-22 | The Broad Institute Inc. | Modification et optimisation de systèmes, de méthodes, d'enzymes et d'échafaudages guides d'orthologues de cas9 et variant pour la manipulation de séquences |
KR102575342B1 (ko) | 2015-06-18 | 2023-09-05 | 더 브로드 인스티튜트, 인코퍼레이티드 | 표적외 효과를 감소시키는 crispr 효소 돌연변이 |
GB2595063B (en) | 2015-07-31 | 2022-03-09 | Univ Minnesota | Modified cells and methods of therapy |
GB201514510D0 (en) | 2015-08-14 | 2015-09-30 | Nemesis Bioscience Ltd | Delivery vehicle |
US9512446B1 (en) | 2015-08-28 | 2016-12-06 | The General Hospital Corporation | Engineered CRISPR-Cas9 nucleases |
WO2017040348A1 (fr) | 2015-08-28 | 2017-03-09 | The General Hospital Corporation | Nucléases crispr-cas9 modifiées |
US9926546B2 (en) | 2015-08-28 | 2018-03-27 | The General Hospital Corporation | Engineered CRISPR-Cas9 nucleases |
CA3000816A1 (fr) | 2015-09-11 | 2017-03-16 | The General Hospital Corporation | Interrogation complete de dsb nucleasiques et sequencage (find-seq) |
CA2999500A1 (fr) | 2015-09-24 | 2017-03-30 | Editas Medicine, Inc. | Utilisation d'exonucleases pour ameliorer l'edition de genome a mediation par crispr/cas |
US9850484B2 (en) | 2015-09-30 | 2017-12-26 | The General Hospital Corporation | Comprehensive in vitro reporting of cleavage events by sequencing (Circle-seq) |
CA3000917A1 (fr) | 2015-10-09 | 2017-04-13 | Monsanto Technology Llc | Nucleases guidees par arn et leurs utilisations |
KR102628801B1 (ko) | 2015-10-12 | 2024-01-25 | 이아이디피, 인크. | 세포내 유전자 변형 및 증가된 상동 재조합을 위한 보호 dna 주형 및 이용 방법 |
MX2018004808A (es) | 2015-10-20 | 2018-08-01 | Pioneer Hi Bred Int | Funcion restauradora para un producto genico no funcional mediante sistemas cas guiados y metodos de uso. |
JP7067793B2 (ja) | 2015-10-23 | 2022-05-16 | プレジデント アンド フェローズ オブ ハーバード カレッジ | 核酸塩基編集因子およびその使用 |
US11330776B2 (en) | 2015-10-30 | 2022-05-17 | Pioneer Hi-Bred International, Inc. | Methods and compositions for rapid plant transformation |
BR112018007796A2 (pt) | 2015-11-06 | 2018-10-30 | Du Pont | plantas de soja, partes de plantas de soja ou sementes de soja, método para selecionar uma célula de soja, métodos de seleção de uma célula de soja e de produção de um locus e molécula de ácido nucleico |
EP3371313B1 (fr) | 2015-11-06 | 2020-10-14 | Pioneer Hi-Bred International, Inc. | Procédés et compositions de transformation végétale améliorée |
CN115786368A (zh) | 2015-11-30 | 2023-03-14 | 先锋国际良种公司 | 植物调节元件及其使用方法 |
US20180362961A1 (en) | 2015-12-11 | 2018-12-20 | Danisco Us Inc. | Methods and compositions for enhanced nuclease-mediated genome modification and reduced off-target site effects |
WO2017105991A1 (fr) | 2015-12-18 | 2017-06-22 | Danisco Us Inc. | Procédés et compositions pour l'expression d'arn de guidage à base d'arnt |
EP4257694A3 (fr) | 2015-12-22 | 2023-12-06 | Pioneer Hi-Bred International, Inc. | Promoteurs préférés par un tissu et procédés d'utilisation |
EP3402885A4 (fr) | 2016-01-11 | 2019-07-03 | The Board of Trustees of the Leland Stanford Junior University | Protéines chimériques et méthodes de régulation de l'expression génique |
MY194127A (en) | 2016-01-11 | 2022-11-14 | Univ Leland Stanford Junior | Chimeric proteins and methods of immunotherapy |
WO2017132239A1 (fr) | 2016-01-26 | 2017-08-03 | Pioneer Hi-Bred International, Inc. | Maïs cireux |
DK3408382T3 (da) | 2016-01-27 | 2022-06-20 | Oncorus Inc | Onkolytiske virale vektorer og anvendelser deraf |
EP3699281A1 (fr) | 2016-03-11 | 2020-08-26 | Pioneer Hi-Bred International, Inc. | Nouveaux systèmes cas9 et procédés d'utilisation |
MX2018011298A (es) | 2016-03-18 | 2019-03-07 | Pioneer Hi Bred Int | Metodos y composiciones para producir gametos clonados, sin reducir, sin recombinar. |
EP3433363A1 (fr) | 2016-03-25 | 2019-01-30 | Editas Medicine, Inc. | Systèmes d'édition de génome comprenant des molécules d'enzyme modulant la réparation et leurs procédés d'utilisation |
WO2017180694A1 (fr) | 2016-04-13 | 2017-10-19 | Editas Medicine, Inc. | Systèmes d'édition de gènes de molécules de fusion cas9 et leurs procédés d'utilisation |
JP7184648B2 (ja) | 2016-04-29 | 2022-12-06 | ビーエーエスエフ プラント サイエンス カンパニー ゲーエムベーハー | 標的核酸の改変のための改善された方法 |
GB201609811D0 (en) | 2016-06-05 | 2016-07-20 | Snipr Technologies Ltd | Methods, cells, systems, arrays, RNA and kits |
US20200332305A1 (en) | 2016-06-14 | 2020-10-22 | Pioneer Hi-Bred International, Inc. | Use of cpfi endonuclease for plant genome modifications |
US20190100745A1 (en) | 2016-06-20 | 2019-04-04 | Pioneer Hi-Bred International, Inc. | Novel cas systems and methods of use |
US11293021B1 (en) | 2016-06-23 | 2022-04-05 | Inscripta, Inc. | Automated cell processing methods, modules, instruments, and systems |
CN109688820B (zh) | 2016-06-24 | 2023-01-10 | 科罗拉多州立大学董事会(法人团体) | 用于生成条形码化组合文库的方法 |
US11078481B1 (en) | 2016-08-03 | 2021-08-03 | KSQ Therapeutics, Inc. | Methods for screening for cancer targets |
GB2568182A (en) | 2016-08-03 | 2019-05-08 | Harvard College | Adenosine nucleobase editors and uses thereof |
EP3497214B1 (fr) | 2016-08-09 | 2023-06-28 | President and Fellows of Harvard College | Protéines de fusion cas9-recombinase programmables et utilisations associées |
WO2018039438A1 (fr) | 2016-08-24 | 2018-03-01 | President And Fellows Of Harvard College | Incorporation d'acides aminés non naturels dans des protéines au moyen de l'édition de bases |
US11078483B1 (en) | 2016-09-02 | 2021-08-03 | KSQ Therapeutics, Inc. | Methods for measuring and improving CRISPR reagent function |
US20190225974A1 (en) | 2016-09-23 | 2019-07-25 | BASF Agricultural Solutions Seed US LLC | Targeted genome optimization in plants |
BR112019007327A2 (pt) | 2016-10-13 | 2019-07-02 | Pioneer Hi Bred Int | método para obter uma célula vegetal, célula vegetal, planta, semente, polinucleotídeo-guia |
GB2573062A (en) | 2016-10-14 | 2019-10-23 | Harvard College | AAV delivery of nucleobase editors |
GB2605883B (en) | 2016-10-18 | 2023-03-15 | Univ Minnesota | Tumor infiltrating lymphocytes and methods of therapy |
CN109906030B (zh) | 2016-11-04 | 2022-03-18 | 安健基因公司 | 用于产生仅重链抗体的经基因修饰的非人动物和方法 |
US11236348B2 (en) | 2016-11-29 | 2022-02-01 | Pioneer Hi-Bred International, Inc. | Transcriptional terminators for gene expression in plants |
US10745677B2 (en) | 2016-12-23 | 2020-08-18 | President And Fellows Of Harvard College | Editing of CCR5 receptor gene to protect against HIV infection |
EP4095263A1 (fr) | 2017-01-06 | 2022-11-30 | Editas Medicine, Inc. | Procédés d'évaluation de la coupure par les nucléases |
WO2018129440A1 (fr) | 2017-01-09 | 2018-07-12 | University Of Massachusetts | Complexes destinés à la délétion et l'édition de gènes |
EP3592853A1 (fr) | 2017-03-09 | 2020-01-15 | President and Fellows of Harvard College | Suppression de la douleur par édition de gène |
US11542496B2 (en) | 2017-03-10 | 2023-01-03 | President And Fellows Of Harvard College | Cytosine to guanine base editor |
US11268082B2 (en) | 2017-03-23 | 2022-03-08 | President And Fellows Of Harvard College | Nucleobase editors comprising nucleic acid programmable DNA binding proteins |
AU2018254547B2 (en) | 2017-04-20 | 2024-06-13 | Egenesis, Inc. | Methods for generating genetically modified animals |
US11591589B2 (en) | 2017-04-21 | 2023-02-28 | The General Hospital Corporation | Variants of Cpf1 (Cas12a) with altered PAM specificity |
WO2018197520A1 (fr) | 2017-04-24 | 2018-11-01 | Dupont Nutrition Biosciences Aps | Procédés et compositions de protéines anti-crispr destinés à être utilisés dans des plantes |
US11499151B2 (en) | 2017-04-28 | 2022-11-15 | Editas Medicine, Inc. | Methods and systems for analyzing guide RNA molecules |
WO2018209320A1 (fr) | 2017-05-12 | 2018-11-15 | President And Fellows Of Harvard College | Arn guides incorporés par aptazyme pour une utilisation avec crispr-cas9 dans l'édition du génome et l'activation transcriptionnelle |
AU2018272067B2 (en) | 2017-05-25 | 2024-07-18 | The General Hospital Corporation | Base editors with improved precision and specificity |
CN110997908A (zh) | 2017-06-09 | 2020-04-10 | 爱迪塔斯医药公司 | 工程化的cas9核酸酶 |
CN111344020A (zh) | 2017-06-15 | 2020-06-26 | 加利福尼亚大学董事会 | 靶向非病毒dna插入 |
US10011849B1 (en) | 2017-06-23 | 2018-07-03 | Inscripta, Inc. | Nucleic acid-guided nucleases |
US9982279B1 (en) | 2017-06-23 | 2018-05-29 | Inscripta, Inc. | Nucleic acid-guided nucleases |
CN111511375A (zh) | 2017-06-30 | 2020-08-07 | 因提玛生物科学公司 | 用于基因治疗的腺相关病毒载体 |
US20190002874A1 (en) | 2017-06-30 | 2019-01-03 | Inscripta, Inc. | Cell libraries created using rationally designed nucleic acids |
US11866726B2 (en) | 2017-07-14 | 2024-01-09 | Editas Medicine, Inc. | Systems and methods for targeted integration and genome editing and detection thereof using integrated priming sites |
WO2019023483A1 (fr) | 2017-07-26 | 2019-01-31 | Oncorus, Inc. | Vecteurs viraux oncolytiques et leurs utilisations |
CN111801345A (zh) | 2017-07-28 | 2020-10-20 | 哈佛大学的校长及成员们 | 使用噬菌体辅助连续进化(pace)的进化碱基编辑器的方法和组合物 |
WO2019027861A1 (fr) | 2017-07-31 | 2019-02-07 | R. J. Reynolds Tobacco Company | Procédés et compositions pour l'édition de gènes à base de virus dans des plantes |
NL2019390B1 (en) | 2017-08-04 | 2019-02-21 | Univ Leiden | Screening Method |
CN111263810A (zh) | 2017-08-22 | 2020-06-09 | 纳匹基因公司 | 使用多核苷酸指导的核酸内切酶的细胞器基因组修饰 |
BR112020003596A2 (pt) | 2017-08-23 | 2020-09-01 | The General Hospital Corporation | nucleases de crispr-cas9 engenheiradas com especificidade de pam alterada |
US10738327B2 (en) | 2017-08-28 | 2020-08-11 | Inscripta, Inc. | Electroporation cuvettes for automation |
WO2019139645A2 (fr) | 2017-08-30 | 2019-07-18 | President And Fellows Of Harvard College | Éditeurs de bases à haut rendement comprenant une gam |
EP3688171A1 (fr) | 2017-09-25 | 2020-08-05 | Pioneer Hi-Bred International, Inc. | Promoteurs ayant une préférence pour des tissus et méthodes d'utilisation |
US10435713B2 (en) | 2017-09-30 | 2019-10-08 | Inscripta, Inc. | Flow through electroporation instrumentation |
US11725228B2 (en) | 2017-10-11 | 2023-08-15 | The General Hospital Corporation | Methods for detecting site-specific and spurious genomic deamination induced by base editing technologies |
MX2020004138A (es) | 2017-10-13 | 2020-08-13 | Pioneer Hi Bred Int | Sistemas y metodos para la reprogramacion celular de una celula vegetal. |
EP3697906A1 (fr) | 2017-10-16 | 2020-08-26 | The Broad Institute, Inc. | Utilisations d'éditeurs de bases adénosine |
MX2020004325A (es) | 2017-10-27 | 2020-11-09 | Univ California | Reemplazo dirigido de receptores de células t endógenos. |
WO2019118463A1 (fr) | 2017-12-15 | 2019-06-20 | Danisco Us Inc | Variants de cas9 et procédés d'utilisation |
WO2019133371A1 (fr) | 2017-12-27 | 2019-07-04 | Pioneer Hi-Bred International, Inc. | Transformation de plantes dicotylédones |
US20200362366A1 (en) | 2018-01-12 | 2020-11-19 | Basf Se | Gene underlying the number of spikelets per spike qtl in wheat on chromosome 7a |
KR20200124702A (ko) | 2018-02-23 | 2020-11-03 | 파이어니어 하이 부렛드 인터내쇼날 인코포레이팃드 | 신규한 cas9 오르소로그 |
US10760075B2 (en) | 2018-04-30 | 2020-09-01 | Snipr Biome Aps | Treating and preventing microbial infections |
CN112204131A (zh) | 2018-03-29 | 2021-01-08 | 因思科瑞普特公司 | 用于诱导和转化的细胞生长速率的自动化控制 |
US10376889B1 (en) | 2018-04-13 | 2019-08-13 | Inscripta, Inc. | Automated cell processing instruments comprising reagent cartridges |
WO2019204378A1 (fr) | 2018-04-17 | 2019-10-24 | The General Hospital Corporation | Dosages in vitro sensibles pour des préférences de substrat et de sites d'agents de liaison, de modification et de clivage d'acide nucléique |
US10557216B2 (en) | 2018-04-24 | 2020-02-11 | Inscripta, Inc. | Automated instrumentation for production of T-cell receptor peptide libraries |
US10858761B2 (en) | 2018-04-24 | 2020-12-08 | Inscripta, Inc. | Nucleic acid-guided editing of exogenous polynucleotides in heterologous cells |
US10508273B2 (en) | 2018-04-24 | 2019-12-17 | Inscripta, Inc. | Methods for identifying selective binding pairs |
EP3788152A4 (fr) * | 2018-05-04 | 2022-03-09 | Locus Biosciences, Inc. | Procédés et compositions pour détruire une bactérie cible |
CN112654710A (zh) | 2018-05-16 | 2021-04-13 | 辛瑟高公司 | 用于指导rna设计和使用的方法和系统 |
EP3797160A1 (fr) | 2018-05-23 | 2021-03-31 | The Broad Institute Inc. | Éditeurs de bases et leurs utilisations |
CA3097915A1 (fr) | 2018-06-28 | 2020-01-02 | Pioneer Hi-Bred International, Inc. | Procedes de selection de plantes transformees |
WO2020005667A1 (fr) | 2018-06-29 | 2020-01-02 | Pioneer Hi-Bred International, Inc. | Gène nac édité chez les plantes |
WO2020005383A1 (fr) | 2018-06-30 | 2020-01-02 | Inscripta, Inc. | Instruments, modules et procédés pour une détection améliorée de séquences éditées dans des cellules vivantes |
BR112021002792A2 (pt) | 2018-08-13 | 2021-06-29 | Pioneer Hi-Bred International, Inc. | novos receptores de toxinas inseticidas e métodos de uso |
US11142740B2 (en) | 2018-08-14 | 2021-10-12 | Inscripta, Inc. | Detection of nuclease edited sequences in automated modules and instruments |
US10532324B1 (en) | 2018-08-14 | 2020-01-14 | Inscripta, Inc. | Instruments, modules, and methods for improved detection of edited sequences in live cells |
US10752874B2 (en) | 2018-08-14 | 2020-08-25 | Inscripta, Inc. | Instruments, modules, and methods for improved detection of edited sequences in live cells |
EP3844263A4 (fr) | 2018-08-30 | 2022-05-25 | Inscripta, Inc. | Détection améliorée de séquences à édition par nucléase dans des modules automatisés et des instruments |
US11851663B2 (en) | 2018-10-14 | 2023-12-26 | Snipr Biome Aps | Single-vector type I vectors |
EP3866583A1 (fr) | 2018-10-16 | 2021-08-25 | Pioneer Hi-Bred International, Inc. | Cartographie fine résultant d'une édition du génome et identification de gène causal |
WO2020086475A1 (fr) | 2018-10-22 | 2020-04-30 | Inscripta, Inc. | Enzymes modifiées |
US11214781B2 (en) | 2018-10-22 | 2022-01-04 | Inscripta, Inc. | Engineered enzyme |
CA3111090A1 (fr) | 2018-10-31 | 2020-05-07 | Pioneer Hi-Bred International, Inc. | Compositions et procedes de transformation de plante mediee par ochrobactrum |
CA3117228A1 (fr) | 2018-12-14 | 2020-06-18 | Pioneer Hi-Bred International, Inc. | Nouveaux systemes crispr-cas d'edition du genome |
WO2020127975A1 (fr) | 2018-12-20 | 2020-06-25 | Basf Plant Science Company Gmbh | Administration native de biomolécules dans des cellules végétales à l'aide de complexes ioniques avec des peptides de pénétration cellulaire |
WO2020163396A1 (fr) | 2019-02-04 | 2020-08-13 | The General Hospital Corporation | Variants d'éditeur de base d'adn adénine avec édition d'arn hors cible réduite |
WO2020185751A1 (fr) | 2019-03-11 | 2020-09-17 | Pioneer Hi-Bred International, Inc. | Procédés de production de plantes clonales |
WO2020191248A1 (fr) | 2019-03-19 | 2020-09-24 | The Broad Institute, Inc. | Procédés et compositions pour l'édition de séquences nucléotidiques |
US11001831B2 (en) | 2019-03-25 | 2021-05-11 | Inscripta, Inc. | Simultaneous multiplex genome editing in yeast |
AU2020247900A1 (en) | 2019-03-25 | 2021-11-04 | Inscripta, Inc. | Simultaneous multiplex genome editing in yeast |
US20220170033A1 (en) | 2019-03-27 | 2022-06-02 | Pioneer Hi-Bred International, Inc. | Plant explant transformation |
US20220154193A1 (en) | 2019-03-28 | 2022-05-19 | Pioneer Hi-Bred International, Inc. | Modified agrobacterium strains and use thereof for plant transformation |
EP3947662A1 (fr) | 2019-04-05 | 2022-02-09 | Danisco US Inc. | Procédés d'intégration d'une séquence d'adn donneur dans le génome de bacillus à l'aide de constructions d'adn recombinant linéaire et compositions associées |
EP3947656A1 (fr) | 2019-04-05 | 2022-02-09 | Danisco US Inc. | Procédés d'intégration de polynucléotides dans le génome de bacillus à l'aide de constructions d'adn recombiné double circulaire et compositions correspondantes |
US20220240467A1 (en) | 2019-04-18 | 2022-08-04 | Pioneer Hi-Bred International, Inc. | Embryogenesis factors for cellular reprogramming of a plant cell |
CN110129246B (zh) * | 2019-04-29 | 2021-02-19 | 华南农业大学 | 一株供体菌、其构建方法与应用以及质粒抑制剂筛选方法 |
EP3953477A4 (fr) | 2019-06-06 | 2022-06-22 | Inscripta, Inc. | Curage pour l'édition récursive de cellules guidée par un acide nucléique |
US10907125B2 (en) | 2019-06-20 | 2021-02-02 | Inscripta, Inc. | Flow through electroporation modules and instrumentation |
AU2020297499A1 (en) | 2019-06-21 | 2022-02-03 | Inscripta, Inc. | Genome-wide rationally-designed mutations leading to enhanced lysine production in E. coli |
US10927385B2 (en) | 2019-06-25 | 2021-02-23 | Inscripta, Inc. | Increased nucleic-acid guided cell editing in yeast |
GB201914137D0 (en) | 2019-10-01 | 2019-11-13 | Univ Leeds Innovations Ltd | Modified Plants |
WO2021087273A1 (fr) * | 2019-11-01 | 2021-05-06 | The Trustees Of Columbia University In The City Of New York | Génération de bibliothèques d'arn crispr à l'échelle du génome à l'aide d'une adaptation de crispr dans des bactéries |
CN114981408A (zh) * | 2019-11-06 | 2022-08-30 | 洛可斯生物科学公司 | Crispr cas系统和溶原性模块 |
WO2021102059A1 (fr) | 2019-11-19 | 2021-05-27 | Inscripta, Inc. | Procédés pour augmenter l'édition observée dans des bactéries |
EP4061939A1 (fr) | 2019-11-19 | 2022-09-28 | Danisco US Inc. | Procédés sans marqueur de sélection pour modifier le génome de bacillus et compositions de ceux-ci |
WO2021105191A1 (fr) | 2019-11-29 | 2021-06-03 | Basf Se | Augmentation de la résistance contre les infections fongiques chez les plantes |
CA3157131A1 (fr) | 2019-12-10 | 2021-06-17 | Inscripta, Inc. | Nouvelles nucleases mad |
US10704033B1 (en) | 2019-12-13 | 2020-07-07 | Inscripta, Inc. | Nucleic acid-guided nucleases |
US20230075913A1 (en) | 2019-12-16 | 2023-03-09 | BASF Agricultural Solutions Seed US LLC | Codon-optimized cas9 endonuclease encoding polynucleotide |
CN114829607A (zh) | 2019-12-18 | 2022-07-29 | 因思科瑞普特公司 | 用于体内检测核酸引导的核酸酶编辑的细胞的Cascade/dCas3互补测定 |
KR20220116504A (ko) | 2019-12-19 | 2022-08-23 | 바스프 에스이 | 정밀 화학물의 제조에서 공시 수율, 탄소-전환-효율 및 탄소 기질 적응성의 증가 |
WO2021122528A1 (fr) | 2019-12-20 | 2021-06-24 | Basf Se | Diminution de la toxicité de terpènes et augmentation du potentiel de production dans des micro-organismes |
US10689669B1 (en) | 2020-01-11 | 2020-06-23 | Inscripta, Inc. | Automated multi-module cell processing methods, instruments, and systems |
KR20220133257A (ko) | 2020-01-27 | 2022-10-04 | 인스크립타 인코포레이티드 | 전기천공 모듈 및 기구 |
US20230107598A1 (en) | 2020-02-28 | 2023-04-06 | Pioneer Hi-Bred International, Inc. | Sorghum doubled haploid production system |
WO2021175756A1 (fr) | 2020-03-04 | 2021-09-10 | Basf Se | Vecteur navette pour l'expression chez e. coli et bacilli |
US20230212593A1 (en) | 2020-03-04 | 2023-07-06 | Basf Se | Method for the production of constitutive bacterial promoters conferring low to medium expression |
CN115362370A (zh) | 2020-04-02 | 2022-11-18 | 先锋国际良种公司 | 新颖的杀昆虫毒素受体和使用方法 |
US20210332388A1 (en) | 2020-04-24 | 2021-10-28 | Inscripta, Inc. | Compositions, methods, modules and instruments for automated nucleic acid-guided nuclease editing in mammalian cells |
EP4146804A1 (fr) | 2020-05-08 | 2023-03-15 | The Broad Institute Inc. | Méthodes et compositions d'édition simultanée des deux brins d'une séquence nucléotidique double brin cible |
US11787841B2 (en) | 2020-05-19 | 2023-10-17 | Inscripta, Inc. | Rationally-designed mutations to the thrA gene for enhanced lysine production in E. coli |
WO2022060749A1 (fr) | 2020-09-15 | 2022-03-24 | Inscripta, Inc. | Édition par crispr pour incorporer des plaques d'amarrage d'acide nucléique dans des génomes de cellules vivantes |
US20240002870A1 (en) | 2020-09-30 | 2024-01-04 | Pioneer Hi-Bred International, Inc. | Rapid transformation of monocot leaf explants |
EP4231816A1 (fr) | 2020-10-21 | 2023-08-30 | Pioneer Hi-Bred International, Inc. | Facteurs de parthénogenèse et leurs procédés d'utilisation |
CA3197678A1 (fr) | 2020-10-21 | 2022-04-28 | Pioneer Hi-Bred International, Inc. | Inducteur haploide double |
US11512297B2 (en) | 2020-11-09 | 2022-11-29 | Inscripta, Inc. | Affinity tag for recombination protein recruitment |
AU2021415461A1 (en) | 2021-01-04 | 2023-08-17 | Inscripta, Inc. | Mad nucleases |
US20240376451A1 (en) | 2021-01-07 | 2024-11-14 | Inscripta, Inc. | Mad nucleases |
US11884924B2 (en) | 2021-02-16 | 2024-01-30 | Inscripta, Inc. | Dual strand nucleic acid-guided nickase editing |
EP4376626A1 (fr) | 2021-07-29 | 2024-06-05 | International N&H Denmark ApS | Compositions et procédés de production de compositions laitières fermentées ayant un arôme de crème |
EP4376627A1 (fr) | 2021-07-29 | 2024-06-05 | International N&H Denmark ApS | Compositions et procédés de production de compositions végétales fermentées ayant un arôme de crème |
EP4384536A1 (fr) * | 2021-08-12 | 2024-06-19 | International N&H Denmark ApS | Compositions et procédés destinés à réguler l'immunité adaptative dans les bactéries |
JP2024537991A (ja) | 2021-10-14 | 2024-10-18 | アーセナル バイオサイエンシズ インコーポレイテッド | 共発現されるshRNAと論理ゲートシステムとを有する免疫細胞 |
WO2023082047A1 (fr) | 2021-11-09 | 2023-05-19 | Dupont Nutrition Biosciences Aps | Compositions et procédés de production de produits laitiers fermentés pour le stockage à température ambiante |
WO2023102393A1 (fr) | 2021-11-30 | 2023-06-08 | Pioneer Hi-Bred International, Inc. | Manipulation de génome chromosomique à grande échelle et à haute efficacité |
WO2023107902A1 (fr) | 2021-12-06 | 2023-06-15 | Napigen, Inc. | Phosphite déshydrogénase en tant que marqueur sélectionnable pour la transformation mitochondriale |
US20230279442A1 (en) | 2021-12-15 | 2023-09-07 | Versitech Limited | Engineered cas9-nucleases and method of use thereof |
WO2023109887A1 (fr) | 2021-12-15 | 2023-06-22 | 南京金斯瑞生物科技有限公司 | Procédé de détection de site d'intégration |
EP4499841A1 (fr) | 2022-03-25 | 2025-02-05 | Pioneer Hi-Bred International, Inc. | Procédés d'induction d'haploïdes parthénogénétiques et de doublement de chromosomes haploïdes |
GB202207774D0 (en) | 2022-05-26 | 2022-07-13 | Cambridge Entpr Ltd | Modified plants |
GB202209518D0 (en) | 2022-06-29 | 2022-08-10 | Snipr Biome Aps | Treating & preventing E coli infections |
WO2024006802A1 (fr) | 2022-06-30 | 2024-01-04 | Pioneer Hi-Bred International, Inc. | Procédés et systèmes à médiation par intelligence artificielle pour édition génomique |
WO2024036190A2 (fr) | 2022-08-09 | 2024-02-15 | Pioneer Hi-Bred International, Inc. | Multiplexage de polynucléotides de guidage |
GB202214410D0 (en) | 2022-09-30 | 2022-11-16 | Ivy Farm Tech Limited | genetically modified cells |
WO2024118876A1 (fr) | 2022-12-01 | 2024-06-06 | Genencor International Bv | Ingénierie génomique multiplex itérative dans les cellules microbiennes à l'aide d'un système de marqueurs de sélection auto-exécutable recombiné |
WO2024118882A1 (fr) | 2022-12-01 | 2024-06-06 | Genencor International Bv | Ingénierie génomique multiplex itérative dans les cellules microbiennes à l'aide d'un système de permutation de marqueurs de sélection |
WO2024118881A1 (fr) | 2022-12-01 | 2024-06-06 | Genencor International Bv | Ingénierie itérative du génome multiplex dans les cellules microbiennes à l'aide d'un système de marqueurs de sélection bidirectionnels |
WO2024123786A1 (fr) | 2022-12-06 | 2024-06-13 | Pioneer Hi-Bred International, Inc. | Procédés et compositions pour la co-administration d'adn-t exprimant de multiples polynucléotides guides dans des plantes |
GB202219829D0 (en) | 2022-12-29 | 2023-02-15 | Ivy Farm Tech Limited | Genetically manipulated cells |
WO2024196921A1 (fr) | 2023-03-20 | 2024-09-26 | Pioneer Hi-Bred International, Inc. | Polypeptides cas à reconnaissance de pam modifiée |
WO2025027166A1 (fr) | 2023-08-01 | 2025-02-06 | Basf Plant Science Company Gmbh | Résistance accrue par expression de la protéine msbp1 |
WO2025027165A1 (fr) | 2023-08-01 | 2025-02-06 | Basf Plant Science Company Gmbh | Résistance accrue par expression d'une protéine ics |
WO2025059184A1 (fr) | 2023-09-12 | 2025-03-20 | Pioneer Hi-Bred International, Inc. | Procédés et compositions pour générer des haploïdes doublés paternels à génome modifié |
Family Cites Families (25)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US2225783A (en) * | 1939-04-07 | 1940-12-24 | Lloyd B Jensen | Sausage treatment |
US3024116A (en) | 1959-02-24 | 1962-03-06 | Libby Mcneill And Libby | Food processing |
US3403032A (en) | 1967-10-04 | 1968-09-24 | Agriculture Usa | Pure culture fermentation process for pickled cucumbers |
US3897307A (en) | 1974-10-23 | 1975-07-29 | Hansens Lab Inc | Stabilized dry cultures of lactic acid-producing bacteria |
US3932674A (en) | 1974-11-29 | 1976-01-13 | The United States Of America | Controlled bulk vegetable fermentation |
US4140800A (en) | 1977-06-13 | 1979-02-20 | Leo Kline | Freeze-dried natural sour dough starter |
US4423079A (en) * | 1980-07-14 | 1983-12-27 | Leo Kline | Growth promoting compositions for Lactobacillus sanfrancisco and method of preparation |
US4621058A (en) | 1983-04-11 | 1986-11-04 | Mid-America Dairymen, Inc. | Method of preparing cheese starter media |
US4683195A (en) | 1986-01-30 | 1987-07-28 | Cetus Corporation | Process for amplifying, detecting, and/or-cloning nucleic acid sequences |
US4683202A (en) | 1985-03-28 | 1987-07-28 | Cetus Corporation | Process for amplifying nucleic acid sequences |
US5097025A (en) | 1989-08-01 | 1992-03-17 | The Rockefeller University | Plant promoters |
NZ239638A (en) * | 1990-09-05 | 1993-12-23 | Univ North Carolina State | Bacteriophage resistant recombinant bacteria and their use in |
JP3631252B2 (ja) * | 1994-05-16 | 2005-03-23 | オランダ国 | 直列変異反復配列オリゴタイピングによる結核菌群細菌の検出および鑑別 |
FR2738015B1 (fr) | 1995-08-22 | 1997-11-14 | Systems Bio Ind | Sequences d'adn et plasmides comprenant au moins un mecanisme de resistance aux phases, bacteries les contenant et leur utilisation |
AU6750198A (en) | 1998-04-03 | 1999-10-25 | Seed Capital Investments-2 (Sci-2) B.V. | A method of interstrain differentiation of bacteria |
US6409175B1 (en) | 1999-07-13 | 2002-06-25 | Grant Prideco, Inc. | Expandable joint connector |
AU6427300A (en) | 1999-08-19 | 2001-03-19 | Chr. Hansen A/S | Phage resistant lactic acid bacterial mutants |
US6849256B1 (en) * | 1999-11-08 | 2005-02-01 | Ganeden Biotech Incorporated | Inhibition of pathogens by probiotic bacteria |
JP2005500847A (ja) | 2001-08-24 | 2005-01-13 | アドバンスド セル テクノロジー、インコーポレイテッド | 分化誘導薬の同定のためのスクリーニング検定及び細胞治療用の分化細胞の調製 |
CA2496630A1 (fr) * | 2002-08-30 | 2004-03-11 | North Carolina State University | Gene resistant a l'infection bacteriophage abiz |
EP2287311A1 (fr) * | 2003-03-04 | 2011-02-23 | Intercell AG | Antigènes pyogènes streptococcus |
CA2619833C (fr) | 2005-08-26 | 2017-05-09 | Danisco A/S | Utilisation de genes associes a crispr-cas |
EP2362915B1 (fr) | 2008-11-07 | 2016-12-21 | DuPont Nutrition Biosciences ApS | Séquences crispr de bifidobactéries |
EP2630156B1 (fr) | 2010-10-20 | 2018-08-22 | DuPont Nutrition Biosciences ApS | Sequences crispr-cas de lactococcus |
TWI583376B (zh) | 2013-03-20 | 2017-05-21 | Hui-Ling Zeng | Compounds isolated from Antelroxicus and their use |
-
2006
- 2006-08-25 CA CA2619833A patent/CA2619833C/fr active Active
- 2006-08-25 WO PCT/US2006/033167 patent/WO2007025097A2/fr active Application Filing
- 2006-08-25 EP EP06802307A patent/EP1916903B1/fr not_active Revoked
- 2006-08-25 NZ NZ565563A patent/NZ565563A/en not_active IP Right Cessation
- 2006-08-25 PL PL10178697T patent/PL2325332T3/pl unknown
- 2006-08-25 EP EP17188839.9A patent/EP3284833B1/fr active Active
- 2006-08-25 DK DK10178850.3T patent/DK2341149T3/en active
- 2006-08-25 AT AT06802307T patent/ATE473637T1/de active
- 2006-08-25 AU AU2006282983A patent/AU2006282983B2/en not_active Ceased
- 2006-08-25 CA CA2961849A patent/CA2961849C/fr active Active
- 2006-08-25 PT PT06802307T patent/PT1916903E/pt unknown
- 2006-08-25 DK DK06802307.6T patent/DK1916903T3/da active
- 2006-08-25 NZ NZ597299A patent/NZ597299A/xx not_active IP Right Cessation
- 2006-08-25 EP EP10178850.3A patent/EP2341149B1/fr active Active
- 2006-08-25 DK DK10169298.6T patent/DK2336362T3/en active
- 2006-08-25 EP EP10178697A patent/EP2325332B1/fr not_active Revoked
- 2006-08-25 EP EP10169298.6A patent/EP2336362B1/fr active Active
- 2006-08-25 DK DK17188839.9T patent/DK3284833T3/da active
- 2006-08-25 ES ES10178697T patent/ES2398918T3/es active Active
- 2006-08-25 DK DK10178697.8T patent/DK2325332T3/da active
- 2006-08-25 US US11/990,885 patent/US10066233B2/en active Active
- 2006-08-25 DE DE602006015484T patent/DE602006015484D1/de active Active
-
2012
- 2012-06-06 US US13/490,050 patent/US9879269B2/en active Active
-
2013
- 2013-08-06 US US13/960,796 patent/US20140199767A1/en not_active Abandoned
-
2016
- 2016-08-04 US US15/229,103 patent/US10640778B2/en not_active Expired - Fee Related
Also Published As
Similar Documents
Publication | Publication Date | Title |
---|---|---|
CA2619833C (fr) | Utilisation de genes associes a crispr-cas | |
AU2015252023B2 (en) | Use | |
AU2012244264B2 (en) | Use | |
EP2860267B1 (fr) | Cultures avec résistance à phage améliorée | |
AU2013234432B2 (en) | Cultures with improved phage resistance | |
ES2348069T3 (es) | Utilización de genes asociados a crispr (cas). |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
EEER | Examination request |