Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories
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Updated
Feb 14, 2025 - Python
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Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories
Zoe provides both broad and highly specialized implementations for bioinformatics. In particular, we focus on common data formats and methods relevant for the sequencing of RNA viruses.
Bioinformatics related user-defined functions for Cloudera Impala.
A collection of scripts for editing and manipulating multiple sequence alignment files.
A rust crate that automatically cleans up a gene alignment by trimming to ORF and identifying and/or removing problematic sequences.
Protein analysis pipeline for characterizing influenza antigenic drift
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