A Knowledge Graph of Common Chemical Names to their Molecular Definition
IUPAC SMILES+ Specification
⚗️ An all-in-one solution for chemical property retrieval from PubChem.
Python script to quickly extract promoter and terminator regions with the NCBI API. Search for the presence of individual pattern or transcription factor responsive elements with manual sequence (IUPAC) or JASPAR API.
Diffusion-based generative drug-like molecular editing with chemical natural language
Encoder-decoders for translating different chemical formats.
Transformer-based molecular generative model for antiviral drug design
A tool to convert IUPAC representations of glycans into SMILES strings.
A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.
IUPAC-based large-scale molecular pre-trained model for property prediction and molecular generation
Blue Obelisk Data Repository - your one stop place of element and isotope data.
Encode and decode biological codes efficiently
Algorithms for Bionformatics - Python Module to handle biological sequences and run common algorithms and techniques
Translate nucleotides (DNA & RNA) to aminoacid using IUPAC ambiguity codes
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
Biostrings port in Java (for study)
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