EM Image Reconstruction Tools using Python
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Updated
May 13, 2019 - Python
EM Image Reconstruction Tools using Python
An essay on comparing 2 ML applications on connectomes
Solution for CNI Machine Learning Challenge
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
Supporting Files of paper titled "Dynamic Simulation of Parkinson's Disease and ALS Propagation in the Brain: A Reaction-Diffusion on Brain Networks Approach"
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
Rapid analysis of scientific papers from bioRxiv and PubMed
Repository for Masharipov, Knyazeva, Korotkov, Cherednichenko & Kireev: "Comparison of whole-brain task-modulated functional connectivity methods for fMRI task connectomics"
Virtual Fly Brain is the only resource integrating Drosophila neurobiology images, data and knowledge all regions of the nervous system from larva to adult.
Create indexes of simple shapes and find all indexed elements that intersect with a query region.
LiFE-GPU-opt software is an optimized implementation of the compute-intensive matrix operations of the LiFE algorithm for GPUs.
Custom MATLAB code for Jun et al. NeuroImage 2022; https://doi.org/10.1016/j.neuroimage.2022.119274
Docker container for FiberNavigator for Brainlife.io
Code and example data for transcriptional-data-guided brain network classification
Zebrafish Hindbrain Connectome
Analysis from the point of view of network science of the connectome of the drosophila
LaTeX code for my PhD thesis.
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