DataBiosphere/toil

cwl-on-arm integration test is flaky when it has to fall back from the Flatcar release JSON

#5411

· adamnovak opened

on Nov 13, 2025

Support WDL 1.2's extended File/Directory syntax

wdl

#5409

· unito-bot opened

on Nov 12, 2025

Make file store layout pretty using hints

cwl

wdl

#5401

· unito-bot opened

on Oct 13, 2025

Temporary blacklist of cluster nodes after repeated job failures?

#5400

· tikk3r opened

on Oct 13, 2025

Toil Kubernetes needs a hook for running <code>singularity registry login</code> commands for feature parity with <code>TOIL_CUSTOM_DOCKER_INIT_COMMAND</code> on Mesos

#5396

· adamnovak opened

on Sep 26, 2025

The concept of <code>exactPython</code> as a constant in <code>version.py</code> is fataly flawed for release packages

bug

build

#5389

· adamnovak opened

on Sep 16, 2025

No outputs in s3 bucket after toil-cwl-runner k8s run, with error non-scalable batch system

#5380

· boyangzhao opened

on Aug 23, 2025

Support WDL 1.2 hints

wdl

#5378

· unito-bot opened

on Aug 22, 2025

Support WDL 1.2 <code>allow_nested_inputs</code> hint

wdl

#5377

· unito-bot opened

on Aug 22, 2025

Expose <code>task</code> object to WDL tasks

wdl

#5376

· unito-bot opened

on Aug 22, 2025

toil always gives me 1 CPU on Slurm (CWL)

#5372

· pmiddend opened

on Aug 15, 2025

<code>src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testCleanCache</code> test is flaky

testing

#5362

· adamnovak opened

on Jul 25, 2025

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Uh oh!

cwl-on-arm integration test is flaky when it has to fall back from the Flatcar release JSON

Support WDL 1.2's extended File/Directory syntax

Make file store layout pretty using hints

Temporary blacklist of cluster nodes after repeated job failures?

Toil Kubernetes needs a hook for running <code>singularity registry login</code> commands for feature parity with <code>TOIL_CUSTOM_DOCKER_INIT_COMMAND</code> on Mesos

The concept of <code>exactPython</code> as a constant in <code>version.py</code> is fataly flawed for release packages

No outputs in s3 bucket after toil-cwl-runner k8s run, with error non-scalable batch system

Support WDL 1.2 hints

Support WDL 1.2 <code>allow_nested_inputs</code> hint

Expose <code>task</code> object to WDL tasks

toil always gives me 1 CPU on Slurm (CWL)

<code>src/toil/test/jobStores/jobStoreTest.py::EncryptedAWSJobStoreTest::testCleanCache</code> test is flaky

Issues

Search results