Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH (Q89464205)

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scientific article published on 31 January 2020

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English	Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH	scientific article published on 31 January 2020

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5 April 2020

Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH (English)

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Victoria A Smith

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Megan Melnyk

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Matthew A Burd

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Kimberly A Sprayberry

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Mark S Edwards

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Daniel G Peterson

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Darin C Bennet

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Rob K Fanter

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Juan P Steibel

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Hunter Glanz

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Chad Immoos

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Margaret S Rice

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Tasha M Santiago-Rodriguez

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Jason Blank

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Jennifer J VanderKelen

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Christopher L Kitts

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Brian D Piccolo

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Michael R La Frano

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Magdalena Maj

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31 January 2020

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American Journal of Physiology - Gastrointestinal and Liver Physiology

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3

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G582-G609

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5 April 2020

describes a project that uses

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Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC7099491/fullTextXML

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inferred from PubMed Central ID database lookup

Recirculation and reutilization of micellar bile lecithin

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https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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inferred from PubMed ID database lookup

Adaptation of the exocrine pancreas to diet

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Development of a differential medium for bile salt hydrolase-active Lactobacillus spp.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

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Quantitative estimation of the hydrophilic-hydrophobic balance of mixed bile salt solutions

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https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Relationship between loss of rat colonic surface epithelium induced by deoxycholate and initiation of the subsequent proliferative response

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Primate biliary physiology. X. Effects of diet and fasting on biliary lipid secretion and relative composition and bile salt metabolism in the rhesus monkey.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Calcium inhibits the damaging and compensatory proliferative effects of fatty acids on mouse colon epithelium.

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https://pubmed.ncbi.nlm.nih.gov/32003601

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Steatohepatitis: a tale of two "hits"?

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https://pubmed.ncbi.nlm.nih.gov/32003601

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Bile acids: natural ligands for an orphan nuclear receptor

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https://pubmed.ncbi.nlm.nih.gov/32003601

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KEGG: kyoto encyclopedia of genes and genomes

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https://pubmed.ncbi.nlm.nih.gov/32003601

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Missing value estimation methods for DNA microarrays

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https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Betaine, a promising new agent for patients with nonalcoholic steatohepatitis: results of a pilot study

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Phosphatidylinositol-specific phospholipase C activity in Lactobacillus rhamnosus with capacity to translocate

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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The effects of short-chain fatty acids on human colon cancer cell phenotype are associated with histone hyperacetylation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Obesity, insulin resistance, and other clinicopathological correlates of pediatric nonalcoholic fatty liver disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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The methionine-choline deficient dietary model of steatohepatitis does not exhibit insulin resistance

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Betaine in human nutrition

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Bile acids induce hepatic stellate cell proliferation via activation of the epidermal growth factor receptor

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Fine mapping of porcine chromosome 6 QTL and LEPR effects on body composition in multiple generations of an Iberian by Landrace intercross

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phosphatidylcholine homeostasis and liver failure

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Mice fed a lipogenic methionine-choline-deficient diet develop hypermetabolism coincident with hepatic suppression of SCD-1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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inferred from PubMed ID database lookup

Prevalence of fatty liver in children and adolescents.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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Control of the autophagy maturation step by the MAPK ERK and p38: lessons from environmental carcinogens

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Chronic high-fat diet affects intestinal fat absorption and postprandial triglyceride levels in the mouse

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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The phosphatidylethanolamine N-methyltransferase pathway is quantitatively not essential for biliary phosphatidylcholine secretion

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Lithocholic acid induction of the FGF19 promoter in intestinal cells is mediated by PXR.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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The development of porcine models of obesity and the metabolic syndrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Mechanisms of hepatic steatosis in mice fed a lipogenic methionine choline-deficient diet

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

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The RAST Server: rapid annotations using subsystems technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Safety of probiotics: translocation and infection

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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The effect of a probiotic on hepatic steatosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Increased intestinal permeability and tight junction alterations in nonalcoholic fatty liver disease.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Nutritional model of steatohepatitis and metabolic syndrome in the Ossabaw miniature swine

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Bile acid transporters

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Relationship of non-alcoholic fatty liver disease to colorectal adenomatous polyps

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Bacterial teichoic acids reverse predominant IL-12 production induced by certain lactobacillus strains into predominant IL-10 production via TLR2-dependent ERK activation in macrophages

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolomic profiling can predict which humans will develop liver dysfunction when deprived of dietary choline

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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QIIME allows analysis of high-throughput community sequencing data

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Membrane sphingolipids as essential molecular signals for Bacteroides survival in the intestine

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Association between composition of the human gastrointestinal microbiome and development of fatty liver with choline deficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Farnesoid X receptor activation inhibits inflammation and preserves the intestinal barrier in inflammatory bowel disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Differential Toll-like receptor recognition and induction of cytokine profile by Bifidobacterium breve and Lactobacillus strains of probiotics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lipid profiling identifies a triacylglycerol signature of insulin resistance and improves diabetes prediction in humans

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Swine as models in biomedical research and toxicology testing

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Endpoints and clinical trial design for nonalcoholic steatohepatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

VSL#3 probiotics regulate the intestinal epithelial barrier in vivo and in vitro via the p38 and ERK signaling pathways

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Choline metabolism provides novel insights into nonalcoholic fatty liver disease and its progression

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dietary phospholipids and intestinal cholesterol absorption

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Disruption of phospholipid and bile acid homeostasis in mice with nonalcoholic steatohepatitis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nutrition, intestinal permeability, and blood ethanol levels are altered in patients with nonalcoholic fatty liver disease (NAFLD)

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cholesterol-lowering probiotics as potential biotherapeutics for metabolic diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diet-induced swine model with obesity/leptin resistance for the study of metabolic syndrome and type 2 diabetes

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative meta-analysis of the effect of Lactobacillus species on weight gain in humans and animals

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/- mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alternative method for gas chromatography-mass spectrometry analysis of short-chain fatty acids in faecal samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NIH Image to ImageJ: 25 years of image analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increasing prevalence of nonalcoholic fatty liver disease among United States adolescents, 1988-1994 to 2007-2010.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel mechanism for gut barrier dysfunction by dietary fat: epithelial disruption by hydrophobic bile acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The severity of histologic liver lesions is independent of body mass index in patients with nonalcoholic fatty liver disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reproducibility of metabolomic profiles among men and women in 2 large cohort studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The metabolic burden of methyl donor deficiency with focus on the betaine homocysteine methyltransferase pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histamine and gut mucosal immune regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Morphological and functional characterization of non-alcoholic fatty liver disease induced by a methionine-choline-deficient diet in C57BL/6 mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intestinal permeability is increased in children with non-alcoholic fatty liver disease, and correlates with liver disease severity

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microbiota modification with probiotics induces hepatic bile acid synthesis via downregulation of the Fxr-Fgf15 axis in mice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Randomised clinical trial: The beneficial effects of VSL#3 in obese children with non-alcoholic steatohepatitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The first 1000 cultured species of the human gastrointestinal microbiota.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A guide to histomorphological evaluation of intestinal inflammation in mouse models.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fructose induced endotoxemia in pediatric nonalcoholic Fatty liver disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The FXR agonist obeticholic acid prevents gut barrier dysfunction and bacterial translocation in cholestatic rats.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The severity of nonalcoholic fatty liver disease is associated with gut dysbiosis and shift in the metabolic function of the gut microbiota

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bile acids regulate intestinal cell proliferation by modulating EGFR and FXR signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database resources of the National Center for Biotechnology Information

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Associations of gut-flora-dependent metabolite trimethylamine-N-oxide, betaine and choline with non-alcoholic fatty liver disease in adults

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlations of Fecal Metabonomic and Microbiomic Changes Induced by High-fat Diet in the Pre-Obesity State

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bile Acids and Dysbiosis in Non-Alcoholic Fatty Liver Disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional analysis: a valid approach to analyze microbiome high-throughput sequencing data

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intestinal Crosstalk between Bile Acids and Microbiota and Its Impact on Host Metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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Fast derivatization of fatty acids in different meat samples for gas chromatography analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bile acids and nonalcoholic fatty liver disease: Molecular insights and therapeutic perspectives

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

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The economic and clinical burden of nonalcoholic fatty liver disease in the United States and Europe

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probiotics may delay the progression of nonalcoholic fatty liver disease by restoring the gut microbiota structure and improving intestinal endotoxemia

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficacy of docosahexaenoic acid-choline-vitamin E in paediatric NASH: a randomized controlled clinical trial.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The presence and severity of nonalcoholic steatohepatitis is associated with specific changes in circulating bile acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Suppressed hepatic bile acid signalling despite elevated production of primary and secondary bile acids in NAFLD.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Clinical impact of non-alcoholic fatty liver disease on the occurrence of colorectal neoplasm: Propensity score matching analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monitoring and Measuring Autophagy

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-fat, high-fructose, high-cholesterol feeding causes severe NASH and cecal microbiota dysbiosis in juvenile Ossabaw swine.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Downregulation of SREBP inhibits tumor growth and initiation by altering cellular metabolism in colon cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probiotic supplementation increases obesity with no detectable effects on liver fat or gut microbiota in obese Hispanic adolescents: a 16-week, randomized, placebo-controlled trial.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Response of fibroblast growth factor 19 and bile acid synthesis after a body weight-adjusted oral fat tolerance test in overweight and obese NAFLD patients: a non-randomized controlled pilot trial.

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Taurocholic acid is an active promoting factor, not just a biomarker of progression of liver cirrhosis: evidence from a human metabolomic study and in vitro experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antimicrobial promotion of pig growth is associated with tissue-specific remodeling of bile acid signature and signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gut bacterial phospholipase Ds support disease-associated metabolism by generating choline

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hepatic Autophagy Deficiency Compromises Farnesoid X Receptor Functionality and Causes Cholestatic Injury

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Taxonomic profiling and populational patterns of bacterial bile salt hydrolase (BSH) genes based on worldwide human gut microbiome

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FXR Regulates Intestinal Cancer Stem Cell Proliferation

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Secondary Bile Acids and Short Chain Fatty Acids in the Colon: A Focus on Colonic Microbiome, Cell Proliferation, Inflammation, and Cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-fructose corn syrup enhances intestinal tumor growth in mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hepatic Insulin Clearance: Mechanism and Physiology

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hepatic cholesterol accumulation ascribed to the activation of ileum Fxr-Fgf15 pathway inhibiting hepatic Cyp7a1 in high-fat diet-induced obesity rats

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FXR modulates the gut-vascular barrier by regulating the entry sites for bacterial translocation in experimental cirrhosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Liver Proliferation Is an Essential Driver of Fibrosis in Mouse Models of Nonalcoholic Fatty Liver Disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/32003601

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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