Terminal transferase-dependent PCR (TDPCR) for in vivo UV photofootprinting of vertebrate cells (Q47573191)

4 February 2018

title

Terminal transferase-dependent PCR (TDPCR) for in vivo UV photofootprinting of vertebrate cells (English)

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author name string

Chen HH

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Kontaraki J

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Bonifer C

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Riggs AD

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publication date

10 April 2001

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Science's STKE : signal transduction knowledge environment

published in

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volume

2001

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issue

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page(s)

pl1

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Chromatin structure analysis by ligation-mediated and terminal transferase-mediated polymerase chain reaction

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In vivo footprinting of a muscle specific enhancer by ligation mediated PCR.

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Ligation-mediated PCR improves the sensitivity of methylation analysis by restriction enzymes and detection of specific DNA strand breaks

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In vivo footprint and methylation analysis by PCR-aided genomic sequencing: comparison of active and inactive X chromosomal DNA at the CpG island and promoter of human PGK-1.

21 January 2018

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In vivo mapping of a DNA adduct at nucleotide resolution: detection of pyrimidine (6-4) pyrimidone photoproducts by ligation-mediated polymerase chain reaction

21 January 2018

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Binding of transcription factors creates hot spots for UV photoproducts in vivo

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Footprinting with UV irradiation and LMPCR.

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UV Light as a Footprinting Agent: Modulation of UV-induced DNA Damage by Transcription Factors Bound at the Promoters of Three Human Genes

21 January 2018

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Terminal transferase-dependent PCR: a versatile and sensitive method for in vivo footprinting and detection of DNA adducts

21 January 2018

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Ligation-mediated PCR for quantitative in vivo footprinting

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In vivo, high-resolution analysis of yeast and mammalian RNA-protein interactions, RNA structure, RNA splicing and ribozyme cleavage by use of terminal transferase-dependent PCR.

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Use of terminal transferase-dependent antisense RNA amplification to determine the transcription start site of the Snrpn gene in individual neurons

21 January 2018

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The chicken lysozyme locus as a paradigm for the complex developmental regulation of eukaryotic gene loci.

21 January 2018

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Sequence-specific detection of aristolochic acid-DNA adducts in the human p53 gene by terminal transferase-dependent PCR.

21 January 2018

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The effect of chromatin structure on cisplatin damage in intact human cells

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The p53 codon 249 mutational hotspot in hepatocellular carcinoma is not related to selective formation or persistence of aflatoxin B1 adducts

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Identifiers

DOI

10.1126/STKE.2001.77.PL1

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