Identification of post-translational modifications by blind search of mass spectra. (Q42674213)

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9 January 2020

title

Identification of post-translational modifications by blind search of mass spectra (English)

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9 January 2020

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9 January 2020

Pavel A Pevzner

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9 January 2020

Stephen Tanner

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9 January 2020

Ebrahim Zandi

series ordinal

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publication date

27 November 2005

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9 January 2020

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volume

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issue

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page(s)

1562-1567

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Identification of phosphoproteins and their phosphorylation sites in the WEHI-231 B lymphoma cell line

9 January 2020

cites work

1 reference

Mutation-tolerant protein identification by mass spectrometry

21 January 2018

1 reference

Efficiency of database search for identification of mutated and modified proteins via mass spectrometry

21 January 2018

1 reference

High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results.

21 January 2018

1 reference

SPIDER: software for protein identification from sequence tags with de novo sequencing error.

21 January 2018

1 reference

P-Mod: an algorithm and software to map modifications to peptide sequences using tandem MS data

21 January 2018

1 reference

Discovering known and unanticipated protein modifications using MS/MS database searching

21 January 2018

1 reference

Probability-based validation of protein identifications using a modified SEQUEST algorithm

21 January 2018

1 reference

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

1 reference

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

21 January 2018

1 reference

Statistical characterization of ion trap tandem mass spectra from doubly charged tryptic peptides

21 January 2018

1 reference

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 January 2018

1 reference

A statistical model for identifying proteins by tandem mass spectrometry

21 January 2018

1 reference

A computational method for assessing peptide- identification reliability in tandem mass spectrometry analysis with SEQUEST.

21 January 2018

1 reference

Peptide sequence tags for fast database search in mass-spectrometry.

21 January 2018

1 reference

Intensity-based protein identification by machine learning from a library of tandem mass spectra.

21 January 2018

1 reference

Intensity-based statistical scorer for tandem mass spectrometry.

21 January 2018

1 reference

A New Algorithm for the Evaluation of Shotgun Peptide Sequencing in Proteomics: Support Vector Machine Classification of Peptide MS/MS Spectra and SEQUEST Scores

21 January 2018

1 reference

Open mass spectrometry search algorithm

21 January 2018

1 reference

Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases

21 January 2018

1 reference

7 January 2021

Identification of protein modifications using MS/MS de novo sequencing and the OpenSea alignment algorithm

1 reference

7 January 2021

Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis

1 reference

7 January 2021

A method for reducing the time required to match protein sequences with tandem mass spectra

1 reference

7 January 2021

Identifiers

DOI

10.1038/NBT1168

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9 January 2020

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