JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison. (Q40312977)

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29 February 2020

title

JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26576653%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

1 reference

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29 February 2020

Frank Oliver Glöckner

series ordinal

object named as

Frank Oliver Glöckner

1 reference

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29 February 2020

Jörg Peplies

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26576653%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Michael Richter

1 reference

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29 February 2020

language of work or name

English

0 references

publication date

16 November 2015

1 reference

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29 February 2020

number of pages

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

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29 February 2020

volume

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29 February 2020

issue

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29 February 2020

page(s)

929-931

1 reference

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Creative Commons Attribution-NonCommercial 4.0 International

29 February 2020

start time

13 October 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

cites work

Past and future species definitions for Bacteria and Archaea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test case

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

The relationship of the whole genome sequence identity to DNA hybridization varies between genera of prokaryotes

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Then and now: a systematic review of the systematics of prokaryotes in the last 80 years

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Genome sequence-based species delimitation with confidence intervals and improved distance functions

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

BLAST+: architecture and applications

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Shifting the genomic gold standard for the prokaryotic species definition

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Versatile and open software for comparing large genomes

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5939971

10.1093/BIOINFORMATICS/BTV681

14 September 2018

Identifiers

DOI

1 reference

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journals/bioinformatics/RichterRGP16

29 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_y2sqrv4jizeqxlxgl4ijlnxhyq

28 January 2021

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/y2sqrv4jizeqxlxgl4ijlnxhyq

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

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29 February 2020

PubMed publication ID

26576653

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26576653%20AND%20SRC:MED&resulttype=core&format=json