Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons. (Q39584708)

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23 January 2020

title

Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons (English)

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23 January 2020

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23 January 2020

Violaine Saint-André

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23 January 2020

Eric Batsché

series ordinal

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23 January 2020

Christian Muchardt

series ordinal

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23 January 2020

publication date

27 February 2011

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Nature Structural & Molecular Biology

23 January 2020

published in

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23 January 2020

volume

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23 January 2020

issue

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23 January 2020

page(s)

337-344

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Alternative isoform regulation in human tissue transcriptomes

23 January 2020

cites work

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Splicing, transcription, and chromatin: a ménage à trois

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Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes

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Rates of in situ transcription and splicing in large human genes

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SR proteins function in coupling RNAP II transcription to pre-mRNA splicing.

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Control of inducible gene expression by signal-dependent transcriptional elongation

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The human SWI/SNF subunit Brm is a regulator of alternative splicing

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Chromatin organization marks exon-intron structure

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Nucleosome positioning as a determinant of exon recognition

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Nucleosomes are well positioned in exons and carry characteristic histone modifications

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The many colours of chromodomains.

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Structure and acetyl-lysine recognition of the bromodomain

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Multivalent engagement of chromatin modifications by linked binding modules

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Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing.

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Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing

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Differential chromatin marking of introns and expressed exons by H3K36me3.

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Discovery and annotation of functional chromatin signatures in the human genome

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Regulation of alternative splicing by histone modifications

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SWI/SNF associates with nascent pre-mRNPs and regulates alternative pre-mRNA processing

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A slow RNA polymerase II affects alternative splicing in vivo

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High-resolution profiling of histone methylations in the human genome

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Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin

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Regulation of an inducible promoter by an HP1beta-HP1gamma switch

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Functional cooperation between HP1 and DNMT1 mediates gene silencing.

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Coupling of signal transduction to alternative pre-mRNA splicing by a composite splice regulator

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Evidence for the existence of an HP1-mediated subcode within the histone code.

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Structural studies of the spliceosome: blind men and an elephant

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Suv39H1 and HP1gamma are responsible for chromatin-mediated HIV-1 transcriptional silencing and post-integration latency

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KAP1 controls endogenous retroviruses in embryonic stem cells

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Relationship between histone H3 lysine 9 methylation, transcription repression, and heterochromatin protein 1 recruitment.

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A subset of the histone H3 lysine 9 methyltransferases Suv39h1, G9a, GLP, and SETDB1 participate in a multimeric complex.

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Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha

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Induction of Progesterone Target Genes Requires Activation of Erk and Msk Kinases and Phosphorylation of Histone H3

21 January 2018

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Interaction of HP1 and Brg1/Brm with the globular domain of histone H3 is required for HP1-mediated repression

21 January 2018

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Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events

21 January 2018

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Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation

21 January 2018

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High-resolution mapping reveals links of HP1 with active and inactive chromatin components

21 January 2018

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Heterochromatin protein 1 (HP1a) positively regulates euchromatic gene expression through RNA transcript association and interaction with hnRNPs in Drosophila

21 January 2018

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Heterochromatin protein 1 (HP1) is associated with induced gene expression in Drosophila euchromatin.

21 January 2018

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

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Histone methyltransferases G9a and GLP form heteromeric complexes and are both crucial for methylation of euchromatin at H3-K9

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RNAi-mediated targeting of heterochromatin by the RITS complex

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Small RNAs in transcriptional gene silencing and genome defence

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Structure-function analysis of SUV39H1 reveals a dominant role in heterochromatin organization, chromosome segregation, and mitotic progression

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Methylation of a histone mimic within the histone methyltransferase G9a regulates protein complex assembly

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Signal-dependent regulation of splicing via phosphorylation of Sam68

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Transcription-independent phosphorylation of the RNA polymerase II C-terminal domain (CTD) involves ERK kinases (MEK1/2).

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The spliceosome: design principles of a dynamic RNP machine

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Advanced mammalian gene transfer: high titre retroviral vectors with multiple drug selection markers and a complementary helper-free packaging cell line

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Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late mitosis

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Splicing factor and exon profiling across human tissues

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Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

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When chromatin meets splicing

31 March 2020

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Cloning and analysis of unique human glutaminase isoforms generated by tissue-specific alternative splicing

31 March 2020

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Functional heterogeneity of CD44 molecules in ovarian cancer cell lines

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21358630

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Histone modification patterns associated with the human X chromosome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21358630