Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure. (Q37697997)

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25 October 2019

title

Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure (English)

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25 October 2019

V Iyer

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25 October 2019

K Struhl

series ordinal

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25 October 2019

language of work or name

English

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publication date

1 June 1995

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25 October 2019

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25 October 2019

volume

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25 October 2019

issue

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25 October 2019

page(s)

2570-2579

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Assessments of DNA inhomogeneities in yeast chromosome III.

25 October 2019

cites work

1 reference

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A peptide motif that recognizes A.T tracts in DNA

23 August 2017

1 reference

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Protein kinase A mediates growth-regulated expression of yeast ribosomal protein genes by modulating RAP1 transcriptional activity

23 August 2017

1 reference

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5' untranslated sequences are required for the translational control of a yeast regulatory gene

23 August 2017

1 reference

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Evidence for translational regulation of the activator of general amino acid control in yeast

23 August 2017

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Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT)

23 August 2017

1 reference

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The crystal structure of d(G-G-G-G-C-C-C-C). A model for poly(dG).poly(dC)

23 August 2017

1 reference

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Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast

23 August 2017

1 reference

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The structure of an oligo(dA).oligo(dT) tract and its biological implications

23 August 2017

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Constitutive and inducible Saccharomyces cerevisiae promoters: evidence for two distinct molecular mechanisms

23 August 2017

1 reference

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Saturation mutagenesis of a yeast his3 "TATA element": genetic evidence for a specific TATA-binding protein

23 August 2017

1 reference

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New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites

23 August 2017

1 reference

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Copper activates metallothionein gene transcription by altering the conformation of a specific DNA binding protein

23 August 2017

1 reference

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Mechanisms of gene regulation in the general control of amino acid biosynthesis in Saccharomyces cerevisiae.

23 August 2017

1 reference

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ACE1 regulates expression of the Saccharomyces cerevisiae metallothionein gene

23 August 2017

1 reference

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23 August 2017

1 reference

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A DNA binding protein that recognizes oligo(dA).oligo(dT) tracts

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Activation of yeast RNA polymerase II transcription by a thymidine-rich upstream element in vitro

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Context affects nuclear protein localization in Saccharomyces cerevisiae

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Purification of a RAS-responsive adenylyl cyclase complex from Saccharomyces cerevisiae by use of an epitope addition method

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Mutations in the bZIP domain of yeast GCN4 that alter DNA-binding specificity

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Chromatin and core particles formed from the inner histones and synthetic polydeoxyribonucleotides of defined sequence

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Saturation mutagenesis of the yeast his3 regulatory site: requirements for transcriptional induction and for binding by GCN4 activator protein

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Molecular mechanisms of transcriptional regulation in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Transcription of two divergently transcribed yeast genes initiates at a common oligo(dA-dT) tract

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

6 September 2017

Activators and targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Chromatin analysis in yeast using NP-40 permeabilised sphaeroplasts.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Suppressors of Saccharomyces cerevisiae his3 promoter mutations lacking the upstream element

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

A hypoxic consensus operator and a constitutive activation region regulate the ANB1 gene of Saccharomyces cerevisiae.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Nucleosome cores reconstituted from poly (dA-dT) and the octamer of histones

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

General initiation factors for RNA polymerase II.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

The basics of basal transcription by RNA polymerase II.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Initiation of transcription by RNA polymerase II: a multi-step process.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

The UV response involving the Ras signaling pathway and AP-1 transcription factors is conserved between yeast and mammals

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

A physical, genetic and transcriptional map of the cloned his3 gene region of Saccharomyces cerevisiae

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

DNA bending and its relation to nucleosome positioning.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Poly(dA).poly(dT) is a B-type double helix with a distinctively narrow minor groove

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Sequence periodicities in chicken nucleosome core DNA.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Cloning and sequencing the HinfI restriction and modification genes

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Deletion analysis of the ARG4 promoter of Saccharomyces cerevisiae: a poly(dAdT) stretch involved in gene transcription

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Direct sequence and footprint analysis of yeast DNA by primer extension.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Poly[d(A · T)]and other synthetic polydeoxynucleotides containing oligoadenosine tracts form nucleosomes easily

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivo

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398371

Sequence dependence of the helical repeat of DNA in solution

1 September 2018

1 reference

12 December 2020

Sequence-dependent helical periodicity of DNA

1 reference

12 December 2020

Promoter Elements, Regulatory Elements, and Chromatin Structure of the Yeast his3 Gene

1 reference

12 December 2020

DNA sequences of two yeast promoter-up mutants

1 reference

12 December 2020

Distinguishing between mechanisms of eukaryotic transcriptional activation with bacteriophage T7 RNA polymerase

1 reference

12 December 2020

Functional dissection of the yeast Cyc8–Tupl transcriptional co-repressor complex

1 reference

12 December 2020

Competitive nucleosome reconstitution of polydeoxynucleotides containing oligoguanosine tracts

1 reference

12 December 2020

Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: a novel in vivo probe for chromatin structure of yeast

1 reference

12 December 2020

10.1002/J.1460-2075.1995.TB07255.X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7781610%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7781610%20AND%20SRC:MED&resulttype=core&format=json

25 October 2019

PubMed publication ID

7781610

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7781610%20AND%20SRC:MED&resulttype=core&format=json