RNA transcript 3'-proximal sequence affects translocation bias of RNA polymerase (Q35878596)

10 August 2017

RNA transcript 3'-proximal sequence affects translocation bias of RNA polymerase (English)

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10 August 2017

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Robert Landick

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10 August 2017

Pyae P Hein

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10 August 2017

Murali Palangat

series ordinal

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10 August 2017

language of work or name

English

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publication date

21 July 2011

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10 August 2017

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10 August 2017

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10 August 2017

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10 August 2017

7002-7014

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describes a project that uses

10 August 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3322512/fullTextXML

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11 July 2018

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11 July 2018

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11 July 2018

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The pyrophosphate analogue foscarnet traps the pre-translocational state of HIV-1 reverse transcriptase in a Brownian ratchet model of polymerase translocation

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Elongation complexes of Thermus thermophilus RNA polymerase that possess distinct translocation conformations

11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded

11 July 2018

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11 July 2018

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Dissection of the his leader pause site by base substitution reveals a multipartite signal that includes a pause RNA hairpin

11 July 2018

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Intrinsic transcript cleavage activity of RNA polymerase

11 July 2018

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57 Sequencing end-labeled DNA with base-specific chemical cleavages

11 July 2018

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Effect of the primary structure of RNA on the pulse character of RNA elongation in vitro by Escherichia coli RNA polymerase: a model

11 July 2018

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Isolation and structural analysis of the Escherichia coli trp leader paused transcription complex

11 July 2018

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Spontaneous cleavage of RNA in ternary complexes of Escherichia coli RNA polymerase and its significance for the mechanism of transcription

11 July 2018

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Role of the RNA polymerase trigger loop in catalysis and pausing.

11 July 2018

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Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner

24 September 2018

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Forward translocation is the natural pathway of RNA release at an intrinsic terminator

24 September 2018

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The structural mechanism of translocation and helicase activity in T7 RNA polymerase

24 September 2018

1 reference

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Site-specific footprinting reveals differences in the translocation status of HIV-1 reverse transcriptase. Implications for polymerase translocation and drug resistance

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3322512

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3322512

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3322512

A Ratchet Mechanism of Transcription Elongation and Its Control

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3322512

Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme fromThermus thermophilus

22 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3322512

Regulation of rho-dependent transcription termination by NusG is specific to the Escherichia coli elongation complex

6 December 2018

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12 December 2020

1 reference

12 December 2020

Sequence-dependent kinetic model for transcription elongation by RNA polymerase

1 reference

12 December 2020

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

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12 December 2020

Translocation by T7 RNA polymerase: a sensitively poised Brownian ratchet

1 reference

12 December 2020

Mechanochemical kinetics of transcription elongation

1 reference

12 December 2020

A central role of the RNA polymerase trigger loop in active-site rearrangement during transcriptional pausing

1 reference

12 December 2020

Processive pyrophosphorolysis of RNA by Escherichia coli RNA polymerase

1 reference

12 December 2020

Identifiers

DOI

10.1021/BI200437Q

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10 August 2017

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10 August 2017

PubMed publication ID

21739957

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