Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes (Q34881670)

5 August 2017

title

Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes (English)

1 reference

5 August 2017

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Craig S Pikaard

1 reference

5 August 2017

Andrzej T Wierzbicki

1 reference

5 August 2017

Jeremy R Haag

series ordinal

1 reference

5 August 2017

language of work or name

English

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publication date

1 November 2008

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5 August 2017

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5 August 2017

volume

135

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5 August 2017

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5 August 2017

page(s)

635-648

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Sex-biased lethality or transmission of defective transcription machinery in Arabidopsis

5 August 2017

cites work

1 reference

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8 July 2018

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

8 July 2018

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PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

8 July 2018

1 reference

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RNA immunoprecipitation for determining RNA-protein associations in vivo

8 July 2018

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Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.

8 July 2018

1 reference

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Argonaute proteins: mediators of RNA silencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Transcription and RNA interference in the formation of heterochromatin.

8 July 2018

1 reference

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Regional control of chromatin organization by noncoding roX RNAs and the NURF remodeling complex in Drosophila melanogaster.

8 July 2018

1 reference

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Genome-wide transcription and the implications for genomic organization

8 July 2018

1 reference

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RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants

8 July 2018

1 reference

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Silencing by imprinted noncoding RNAs: is transcription the answer?

8 July 2018

1 reference

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Protocol for the fast chromatin immunoprecipitation (ChIP) method

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Slicing and spreading of heterochromatic silencing by RNA interference

8 July 2018

1 reference

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RNA and protein actors in X-chromosome inactivation

8 July 2018

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Short silencing RNA: the dark matter of genetics?

8 July 2018

1 reference

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Role of RNA polymerase IV in plant small RNA metabolism

8 July 2018

1 reference

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Noncoding RNAs and intranuclear positioning in monoallelic gene expression

8 July 2018

1 reference

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Noncoding RNAs and gene silencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Genome-wide profiling and analysis of Arabidopsis siRNAs

8 July 2018

1 reference

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Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Eukaryotic regulatory RNAs: an answer to the 'genome complexity' conundrum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Argonaute slicing is required for heterochromatic silencing and spreading

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis.

8 July 2018

1 reference

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The diversity of RNA silencing pathways in plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

RNA polymerase IV directs silencing of endogenous DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Role of transposable elements in heterochromatin and epigenetic control

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

RNA polymerase II structure: from core to functional complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Genetic and functional diversification of small RNA pathways in plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Partitioning and plasticity of repressive histone methylation states in mammalian chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

The RNA polymerase II core promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Maintenance of genomic methylation requires a SWI2/SNF2-like protein

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Xist has properties of the X-chromosome inactivation centre

8 July 2018

1 reference

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Purines are required at the 5' ends of newly initiated RNAs for optimal RNA polymerase III gene expression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

The nucleotide sequence of the initiation and termination sites for ribosomal rna transcription in x. laevis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Transcriptional landscape of the human and fly genomes: nonlinear and multifunctional modular model of transcriptomes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

A multistep process gave rise to RNA polymerase IV of land plants.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Profiling DNA methylation patterns using genomic tiling microarrays.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Atypical RNA polymerase subunits required for RNA-directed DNA methylation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Identification and structural analysis of SINE elements in the Arabidopsis thaliana genome

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2602798

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19013275

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19013275

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19013275

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2008.09.035

1 reference

5 August 2017

1 reference

5 August 2017

1 reference