Accurate phylogenetic classification of variable-length DNA fragments (Q34593023)

3 August 2017

title

Accurate phylogenetic classification of variable-length DNA fragments (English)

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3 August 2017

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Philip Hugenholtz

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Héctor García Martín

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Aristotelis Tsirigos

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Isidore Rigoutsos

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Alice Carolyn McHardy

series ordinal

object named as

Alice Carolyn McHardy

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3 August 2017

publication date

10 December 2006

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3 August 2017

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3 August 2017

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3 August 2017

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3 August 2017

page(s)

63-72

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Environmental genome shotgun sequencing of the Sargasso Sea

3 August 2017

cites work

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Comparative metagenomics of microbial communities

21 January 2018

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Community structure and metabolism through reconstruction of microbial genomes from the environment

21 January 2018

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Exploring prokaryotic diversity in the genomic era

21 January 2018

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Phylogenetic structure of the prokaryotic domain: The primary kingdoms

21 January 2018

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An archaeal genomic signature

21 January 2018

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Genome trees constructed using five different approaches suggest new major bacterial clades

21 January 2018

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Toward Automatic Reconstruction of a Highly Resolved Tree of Life

21 January 2018

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Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

21 January 2018

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Application of tetranucleotide frequencies for the assignment of genomic fragments

21 January 2018

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Computational improvements reveal great bacterial diversity and high metal toxicity in soil

21 January 2018

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Dinucleotide relative abundance extremes: a genomic signature

21 January 2018

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Compositional differences within and between eukaryotic genomes

21 January 2018

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Genomic signature: characterization and classification of species assessed by chaos game representation of sequences

21 January 2018

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Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier

21 January 2018

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Evolutionary implications of microbial genome tetranucleotide frequency biases

21 January 2018

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Exploration of phylogenetic data using a global sequence analysis method

21 January 2018

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Using pyrosequencing to shed light on deep mine microbial ecology

21 January 2018

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Variation in the strength of selected codon usage bias among bacteria

21 January 2018

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Synonymous codon usage is subject to selection in thermophilic bacteria

21 January 2018

1 reference

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

21 January 2018

1 reference

Microbial community genomics in the ocean

21 January 2018

1 reference

Fluorescence in situ hybridization-flow cytometry-cell sorting-based method for separation and enrichment of type I and type II methanotroph populations

21 January 2018

1 reference

Sequencing genomes from single cells by polymerase cloning

21 January 2018

1 reference

Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA

21 January 2018

1 reference

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

21 January 2018

1 reference

A new computational method for the detection of horizontal gene transfer events

21 January 2018

1 reference

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

21 January 2018

1 reference

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

21 January 2018

1 reference

7 January 2021

Genes from nine genomes are separated into their organisms in the dinucleotide composition space

1 reference

7 January 2021

Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.

1 reference

7 January 2021

Database resources of the National Center for Biotechnology Information

1 reference

7 January 2021

Identifiers

DOI

10.1038/NMETH976

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Dimensions Publication ID

3 August 2017

1007149601

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Fatcat ID

release_rnx2bpv5g5eghnemqafm5n6ew4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/rnx2bpv5g5eghnemqafm5n6ew4

24 November 2022

mapped directly with Wikidata item

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