Target DNA structure plays a critical role in Tn7 transposition (Q34582667)

3 August 2017

title

Target DNA structure plays a critical role in Tn7 transposition (English)

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3 August 2017

P N Kuduvalli

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3 August 2017

J E Rao

series ordinal

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3 August 2017

N L Craig

series ordinal

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3 August 2017

language of work or name

English

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publication date

1 February 2001

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3 August 2017

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3 August 2017

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3 August 2017

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3 August 2017

page(s)

924-932

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describes a project that uses

3 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC145423/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Selective recognition of pyrimidine motif triplexes by a protein encoded by the bacterial transposon Tn7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Analysis of gain-of-function mutants of an ATP-dependent regulator of Tn7 transposition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Recognition of triple-helical DNA structures by transposon Tn7.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

DNA distortion mechanism for transcriptional activation by ZntR, a Zn(II)-responsive MerR homologue in Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Structure of a triple helical DNA with a triplex-duplex junction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Host proteins can stimulate Tn7 transposition: a novel role for the ribosomal protein L29 and the acyl carrier protein

7 July 2018

1 reference

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Target choice and orientation preference of the insertion sequence IS903

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Target site selection in transposition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Gain-of-function mutations in TnsC, an ATP-dependent transposition protein that activates the bacterial transposon Tn7

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

The Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between different gene products.

7 July 2018

1 reference

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7 July 2018

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DNase I footprinting of triple helix formation at polypurine tracts by acridine-linked oligopyrimidines: stringency, structural changes and interaction with minor groove binding ligands

7 July 2018

1 reference

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Chemical probe and missing nucleoside analysis of Flp recombinase bound to the recombination target sequence

7 July 2018

1 reference

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57 Sequencing end-labeled DNA with base-specific chemical cleavages

7 July 2018

1 reference

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Tn7 transposition: recognition of the attTn7 target sequence

7 July 2018

1 reference

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Sequence-directed curvature of DNA.

7 July 2018

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Chemical and photochemical probing of DNA complexes

7 July 2018

1 reference

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Nuclease activity of 1,10-phenanthroline-copper in study of protein-DNA interactions

7 July 2018

1 reference

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Tn7: a target site-specific transposon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Purification and characterization of TnsC, a Tn7 transposition protein that binds ATP and DNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection

7 July 2018

1 reference

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A computational and experimental study of the bending induced at a double-triple helix junction

7 July 2018

1 reference

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Switching from cut-and-paste to replicative Tn7 transposition.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

Tn7 transposition: target DNA recognition is mediated by multiple Tn7-encoded proteins in a purified in vitro system

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145423

A symmetrical six-base-pair target site sequence determines Tn10 insertion specificity

27 October 2018

1 reference

12 December 2020

The missing nucleoside experiment: a new technique to study recognition of DNA by protein

1 reference

12 December 2020

Hydroxyl radical footprinting

1 reference

12 December 2020

IS231A insertion specificity: consensus sequence and DNA bending at the target site

1 reference

12 December 2020

Thermodynamic, kinetic, and conformational properties of a parallel intermolecular DNA triplex containing 5' and 3' junctions

1 reference

12 December 2020

Mobile DNA elements: controlling transposition with ATP-dependent molecular switches

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12 December 2020

DNA distortion as a factor in nucleosome positioning

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12 December 2020

The roles of specific template nucleosides in the formation of stable transcription complexes by Escherichia coli RNA polymerase

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12 December 2020

Structural studies of lacUV5-RNA polymerase interactions in vitro. Ethylation interference and missing nucleoside analysis

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12 December 2020

Identifiers

DOI

10.1093/EMBOJ/20.4.924

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3 August 2017

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3 August 2017

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