Multigene phylogeny resolves deep branching of Amoebozoa (Q34434704)

2 August 2017

title

Multigene phylogeny resolves deep branching of Amoebozoa (English)

1 reference

2 August 2017

1 reference

0 references

Cédric Berney

0 references

Alexander Kudryavtsev

object named as

Alexander Kudryavtsev

0 references

Thomas Cavalier-Smith

object named as

Thomas Cavalier-Smith

1 reference

2 August 2017

author name string

Anna Maria Fiore-Donno

1 reference

2 August 2017

Ema Chao

1 reference

2 August 2017

Elizabeth A Snell

1 reference

2 August 2017

Rhodri Lewis

1 reference

2 August 2017

publication date

20 August 2014

1 reference

Molecular Phylogenetics and Evolution

2 August 2017

1 reference

inferred from page(s)

published in

1 reference

2 August 2017

1 reference

2 August 2017

page(s)

293-304

1 reference

The Revised Classification of Eukaryotes

2 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Micriamoeba tesseris nov. gen. nov. sp.: a new taxon of free-living small-sized Amoebae non-permissive to virulent Legionellae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Monophyly and Associated Terms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes, and stramenopiles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

"Slime molds" among the Tubulinea (Amoebozoa): molecular systematics and taxonomy of Copromyxa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenomics demonstrates that breviate flagellates are related to opisthokonts and apusomonads

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenomics reshuffles the eukaryotic supergroups

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenomics of the intracellular parasite Mikrocytos mackini reveals evidence for a mitosome in rhizaria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A revised six-kingdom system of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Deep phylogeny, ancestral groups and the four ages of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The neomuran revolution and phagotrophic origin of eukaryotes and cilia in the light of intracellular coevolution and a revised tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The zooflagellates Stephanopogon and Percolomonas are a clade (class Percolatea: Phylum Percolozoa)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Molecular phylogeny of Amoebozoa and the evolutionary significance of the unikont Phalansterium

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A description of a new "Amoebozoan" isolated from the American lobster, Homarus americanus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Rooting the eukaryotic tree with mitochondrial and bacterial proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Base-calling of automated sequencer traces using phred. II. Error probabilities

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Deep phylogeny and evolution of slime moulds (mycetozoa).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

An alternative root for the eukaryote tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Gene content evolution in Discobid mitochondria deduced from the phylogenetic position and complete mitochondrial genome of Tsukubamonas globosa.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Subulatomonas tetraspora nov. gen. nov. sp. is a member of a previously unrecognized major clade of eukaryotes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

"Minute" species of Cochliopodium (Himatismenida): Description of three new fresh- and brackish-water species with a new diagnosis for Cochliopodium minus Page, 1976.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Squamamoeba japonica n. g. n. sp. (Amoebozoa): a deep-sea amoeba from the Sea of Japan with a novel cell coat structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

18S ribosomal RNA gene sequences of Cochliopodium (Himatismenida) and the phylogeny of Amoebozoa.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Ultrastructure, SSU rRNA gene sequences and phylogenetic relationships of Flamella Schaeffer, 1926 (Amoebozoa), with description of three new species

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Ovalopodium desertum n. sp. and the phylogenetic relationships of Cochliopodiidae (Amoebozoa).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A revision of the order Pellitida Smirnov et al., 2011 (Amoebozoa, Discosea) based on ultrastructural and molecular evidence, with description of Endostelium crystalliferum n. sp.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Comprehensive phylogenetic reconstruction of amoebozoa based on concatenated analyses of SSU-rDNA and actin genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Multigene phylogenetic reconstruction of the Tubulinea (Amoebozoa) corroborates four of the six major lineages, while additionally revealing that shell composition does not predict phylogeny in the Arcellinida

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

PhyloBayes MPI: phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The effects of model choice and mitigating bias on the ribosomal tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

An improved general amino acid replacement matrix

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A newly revised classification of the protozoa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The testate lobose amoebae (order Arcellinida Kent, 1880) finally find their home within Amoebozoa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenetic position of Multicilia marina and the evolution of Amoebozoa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Deep metazoan phylogeny: when different genes tell different stories.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Mitosis and Pseudopod Formation in Vexillifera bacillipedes n. sp., a Mayorellid Amoeba

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Platyamoeba stenopodia. n. g., n. sp., a Freshwater Amoeba*

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Molecular phylogeny of unikonts: new insights into the position of apusomonads and ancyromonads and the internal relationships of opisthokonts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Evaluating support for the current classification of eukaryotic diversity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Broadly sampled multigene analyses yield a well-resolved eukaryotic tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Untangling the phylogeny of amoeboid protists

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Resolving difficult phylogenetic questions: why more sequences are not enough

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Evolution of Archamoebae: morphological and molecular evidence for pelobionts including Rhizomastix, Entamoeba, Iodamoeba, and Endolimax

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Toward resolving the eukaryotic tree: the phylogenetic positions of jakobids and cercozoans.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

SCaFoS: a tool for selection, concatenation and fusion of sequences for phylogenomics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Impact of missing data on phylogenies inferred from empirical phylogenomic data sets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Eumycetozoa = Amoebozoa?: SSUrDNA phylogeny of protosteloid slime molds and its significance for the amoebozoan supergroup

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Multigene Phylogeny of Choanozoa and the Origin of Animals

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

The problem of rooting rapid radiations.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Molecular phylogeny and classification of the lobose amoebae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogeny, evolution, and taxonomy of vannellid amoebae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page 1987; with description of Acramoeba dendroida n. g., n. sp., originally misidentified as 'Gephyramoeba sp.'

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A revised classification of naked lobose amoebae (Amoebozoa: lobosa)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenetic significance of the flagellar apparatus in protostelids (eumycetozoa)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

A rapid bootstrap algorithm for the RAxML Web servers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Phylogenetic placement of diverse amoebae inferred from multigene analyses and assessment of clade stability within 'Amoebozoa' upon removal of varying rate classes of SSU-rDNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Ultrastructural description of Breviata anathema, n. gen., n. sp., the organism previously studied as "Mastigamoeba invertens".

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Broadly sampled multigene trees of eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Evolution of microtubule organizing centers across the tree of eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Collodictyon--an ancient lineage in the tree of eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

Sulcozoa revealed as a paraphyletic group in mitochondrial phylogenomics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.08.011

10.1016/J.YMPEV.2014.08.011

7 January 2021

Identifiers

DOI

1 reference

2 August 2017

1 reference