Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions. (Q34181399)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12770872%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

title

Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions (English)

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4 November 2019

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4 November 2019

M Patra

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4 November 2019

M T Hyvönen

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4 November 2019

E Falck

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4 November 2019

P Lindqvist

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4 November 2019

I Vattulainen

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4 November 2019

language of work or name

English

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publication date

1 June 2003

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4 November 2019

number of pages

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inferred from page(s)

published in

Biophysical Journal

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4 November 2019

volume

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4 November 2019

issue

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4 November 2019

page(s)

3636-3645

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Molecular dynamics simulation of spontaneous membrane fusion during a cubic-hexagonal phase transition

4 November 2019

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Molecular dynamics simulation of dipalmitoylphosphatidylserine bilayer with Na+ counterions

5 July 2018

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Structural properties of a highly polyunsaturated lipid bilayer from molecular dynamics simulations

5 July 2018

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5 July 2018

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5 July 2018

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Structure of lipid bilayers

5 July 2018

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On the truncation of long-range electrostatic interactions in DNA.

5 July 2018

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Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations

5 July 2018

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Molecular dynamics simulation of dipalmitoylphosphatidylcholine membrane with cholesterol sulfate

5 July 2018

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Structure of dipalmitoylphosphatidylcholine/cholesterol bilayer at low and high cholesterol concentrations: molecular dynamics simulation

5 July 2018

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Molecular dynamics simulations of biomolecules: long-range electrostatic effects

5 July 2018

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Effect of artificial periodicity in simulations of biomolecules under Ewald boundary conditions: a continuum electrostatics study

5 July 2018

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Importance of explicit salt ions for protein stability in molecular dynamics simulation.

5 July 2018

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A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems

5 July 2018

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Structure and dynamic properties of diunsaturated 1-palmitoyl-2-linoleoyl-sn-glycero-3-phosphatidylcholine lipid bilayer from molecular dynamics simulation

5 July 2018

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Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature

5 July 2018

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A comparison of DMPC- and DLPE-based lipid bilayers

5 July 2018

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Restatement of order parameters in biomembranes: calculation of C-C bond order parameters from C-D quadrupolar splittings

5 July 2018

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The membrane dipole potential in a total membrane potential model. Applications to hydrophobic ion interactions with membranes

5 July 2018

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5 July 2018

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5 July 2018

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Cutoff size does strongly influence molecular dynamics results on solvated polypeptides

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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7 January 2021

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Collective motion artifacts arising in long-duration molecular dynamics simulations

7 January 2021

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7 January 2021

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Simulation of the Spontaneous Aggregation of Phospholipids into Bilayers

7 January 2021

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7 January 2021

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7 January 2021

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PubMed

https://pubmed.ncbi.nlm.nih.gov/12770872

12 December 2020

inferred from PubMed ID database lookup

Computational modeling of DNA-cationic lipid complexation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12770872

12 December 2020

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A smooth particle mesh Ewald method

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7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1016/S0006-3495(03)75094-2

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4 November 2019

1 reference

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4 November 2019

PubMed publication ID

12770872

1 reference

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