Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome (Q33897588)

29 July 2017

title

Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome (English)

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29 July 2017

John M Greally

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29 July 2017

language of work or name

English

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publication date

26 December 2001

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Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

published in

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29 July 2017

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29 July 2017

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29 July 2017

page(s)

327-332

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Retrotransposed genes such as Frat3 in the mouse Chromosome 7C Prader-Willi syndrome region acquire the imprinted status of their insertion site

29 July 2017

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5 July 2018

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5 July 2018

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5 July 2018

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Sequence and functional comparison in the Beckwith-Wiedemann region: implications for a novel imprinting centre and extended imprinting

5 July 2018

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M6P/IGF2R imprinting evolution in mammals

5 July 2018

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Imprinting of human GRB10 and its mutations in two patients with Russell-Silver syndrome

5 July 2018

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Molecular evidence for a relationship between LINE-1 elements and X chromosome inactivation: the Lyon repeat hypothesis

5 July 2018

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CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

5 July 2018

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

5 July 2018

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SINE retroposons can be used in vivo as nucleation centers for de novo methylation

5 July 2018

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Parent-of-origin specific histone acetylation and reactivation of a key imprinted gene locus in Prader-Willi syndrome.

5 July 2018

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Evolutionary inventions and continuity of CORE-SINEs in mammals

5 July 2018

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Isochores and the evolutionary genomics of vertebrates

5 July 2018

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Interspersed repeats and other mementos of transposable elements in mammalian genomes

5 July 2018

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Nuclear organization of mammalian genomes. Polar chromosome territories build up functionally distinct higher order compartments

5 July 2018

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Origin and phylogenetic distribution of Alu DNA repeats: irreversible events in the evolution of primates

5 July 2018

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Role of a 461-bp G-rich repetitive element in H19 transgene imprinting.

5 July 2018

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CORE-SINEs: eukaryotic short interspersed retroposing elements with common sequence motifs

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

In vivo nuclease hypersensitivity studies reveal multiple sites of parental origin-dependent differential chromatin conformation in the 150 kb SNRPN transcription unit

5 July 2018

1 reference

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Does SINE evolution preclude Alu function?

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Genomic imprinting of a human apoptosis gene homologue, TSSC3

5 July 2018

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Cytosine methylation and the ecology of intragenomic parasites

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

The human Achaete-Scute homologue 2 (ASCL2,HASH2) maps to chromosome 11p15.5, close to IGF2 and is expressed in extravillus trophoblasts.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Genomic imprinting of the human serotonin-receptor (HTR2) gene involved in development of retinoblastoma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Regulation of beta-globin gene expression: straightening out the locus.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Minimal definition of the imprinting center and fixation of chromosome 15q11-q13 epigenotype by imprinting mutations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Standardized nomenclature for Alu repeats

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Uniparental disomy in humans: development of an imprinting map and its implications for prenatal diagnosis

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Role for DNA methylation in genomic imprinting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Mosaic and polymorphic imprinting of the WT1 gene in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

New sites of methylcytosine-rich DNA detected on metaphase chromosomes

5 July 2018

1 reference

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Ubiquitous mammalian-wide interspersed repeats (MIRs) are molecular fossils from the mesozoic era

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Alu repeated DNAs are differentially methylated in primate germ cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Emergence of master sequences in families of retroposons derived from 7sl RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Enhancement of reporter gene de novo methylation by DNA fragments from the alpha-fetoprotein control region.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Number of CpG islands and genes in human and mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Human genome organization: Alu, LINES, and the molecular structure of metaphase chromosome bands

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Compositional patterns in vertebrate genomes: conservation and change in evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

The current source of human Alu retroposons is a conserved gene shared with Old World monkey

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Genomic imprinting in mammalian development: a parental tug-of-war

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

Parental imprinting of the mouse insulin-like growth factor II gene.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

DNA methylation: evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

The mouse insulin-like growth factor type-2 receptor is imprinted and closely linked to the Tme locus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=117560

A paternal-specific methylation imprint marks the alleles of the mouse H19 gene

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Human KVLQT1 gene shows tissue-specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

CpG doublets, CpG islands and Alu repeats in long human DNA sequences from different isochore families.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Human GRB10 is imprinted and expressed from the paternal and maternal allele in a highly tissue- and isoform-specific fashion

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

SINEs and LINEs share common 3' sequences: a review.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Functional Polymorphism in the Parental Imprinting of the Human IGF2R Gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Gene density in the Giemsa bands of human chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

The insulin–like growth factor type–2 receptor gene is imprinted in the mouse but not in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Mutagenic deamination of cytosine residues in DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.012539199

Selection against deleterious LINE-1-containing loci in the human lineage

21 January 2018

1 reference

12 December 2020

Paternal expression of WT1 in human fibroblasts and lymphocytes

1 reference

12 December 2020

Mammalian X chromosome inactivation

1 reference

12 December 2020

An imprinted antisense RNA overlaps UBE3A and a second maternally expressed transcript

1 reference

12 December 2020

Rescue of the T-associated maternal effect in mice carrying null mutations in Igf-2 and Igf2r, two reciprocally imprinted genes

1 reference

12 December 2020

Characteristics of imprinted genes

1 reference

12 December 2020

Parental origin effects in mice

1 reference

12 December 2020

Imprinted genes have few and small introns

1 reference

12 December 2020

Tandem B1 elements located in a mouse methylation center provide a target for de novo DNA methylation

1 reference

12 December 2020

Allelic expression of IGF2 in marsupials and birds

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.012539199

1 reference

29 July 2017

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29 July 2017

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