A mutation in T7 RNA polymerase that facilitates promoter clearance (Q33770901)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

title

A mutation in T7 RNA polymerase that facilitates promoter clearance (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Jean Guillerez

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Florence Proux

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Hélène Launay

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Marc Dreyfus

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

language of work or name

English

0 references

publication date

14 April 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

number of pages

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

volume

102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

page(s)

5958-5963

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

Initial bubble collapse plays a key role in the transition to elongation in T7 RNA polymerase

10 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

The structural basis of the transition from initiation to elongation phases of transcription, as well as translocation and strand separation, by T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Changes in conserved region 3 of Escherichia coli sigma 70 reduce abortive transcription and enhance promoter escape

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Promoter clearance and escape in prokaryotes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

T7 promoter release mediated by DNA scrunching

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Structure of a transcribing T7 RNA polymerase initiation complex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

NTP concentration effects on initial transcription by T7 RNAP indicate that translocation occurs through passive sliding and reveal that divergent promoters have distinct NTP concentration requirements for productive initiation.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Three transitions in the RNA polymerase II transcription complex during initiation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

The low processivity of T7 RNA polymerase over the initially transcribed sequence can limit productive initiation in vivo.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Kinetic mechanism of transcription initiation by bacteriophage T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Transcribing of Escherichia coli genes with mutant T7 RNA polymerases: stability of lacZ mRNA inversely correlates with polymerase speed

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

The phage RNA polymerases are related to DNA polymerases and reverse transcriptases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

RNA template-directed RNA synthesis by T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

The kinetics and processivity of nucleic acid polymerases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Cloning and expression of the gene for bacteriophage T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Interactions of the RNA polymerase of bacteriophage T7 with its promoter during binding and initiation of transcription

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Processivity in early stages of transcription by T7 RNA polymerase

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

The efficiency of promoter clearance distinguishes T7 class II and class III promoters

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

Mutagenesis of plasmid DNA with hydroxylamine: isolation of mutants of multi-copy plasmids

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087904

A mutant T7 RNA polymerase that is defective in RNA binding and blocked in the early stages of transcription

4 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407141102

Promoter binding, initiation, and elongation by bacteriophage T7 RNA polymerase. A single-molecule view of the transcription cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407141102

The T7 RNA polymerase intercalating hairpin is important for promoter opening during initiation but not for RNA displacement or transcription bubble stability during elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407141102

Promoter clearance by T7 RNA polymerase. Initial bubble collapse and transcript dissociation monitored by base analog fluorescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407141102

Characterization of a set of T7 RNA polymerase active site mutants

21 January 2018

1 reference

12 December 2020

Rapid mutagenesis and purification of phage RNA polymerases

1 reference

12 December 2020

Role of open complex instability in kinetic promoter selection by bacteriophage T7 RNA polymerase

1 reference

12 December 2020

Topological and conformational analysis of the initiation and elongation complex of t7 RNA polymerase suggests a new twist

1 reference

12 December 2020

Cycling of ribonucleic acid polymerase to produce oligonucleotides during initiation in vitro at the lac UV5 promoter

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0407141102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

PubMed publication ID

15831591

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15831591%20AND%20SRC:MED&resulttype=core&format=json