Exosome nuclease subunit RRP6 YOR001W (Q27551691)

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fungal protein found in Saccharomyces cerevisiae S288c
  • RRP6
  • exosome nuclease subunit RRP6
  • YOR001W
edit
Language Label Description Also known as
English
Exosome nuclease subunit RRP6 YOR001W
fungal protein found in Saccharomyces cerevisiae S288c
  • RRP6
  • exosome nuclease subunit RRP6
  • YOR001W

Statements

molecular function
cell component
biological process
U4 snRNA 3'-end processing
determination method or standard
IMP
IGI
5 references
retrieved
9 May 2019
stated in
Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IGI
retrieved
9 May 2019
stated in
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IGI
nuclear polyadenylation-dependent rRNA catabolic process
determination method or standard
IMP
IGI
7 references
retrieved
14 February 2019
stated in
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
5-fluorouracil enhances exosome-dependent accumulation of polyadenylated rRNAs
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA.
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
Polyadenylation of rRNA in Saccharomyces cerevisiae.
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
14 February 2019
stated in
Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IGI
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method or standard
IBA
IMP
5 references
retrieved
9 May 2019
stated in
Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IBA
nuclear polyadenylation-dependent rRNA catabolic process
determination method or standard
IBA
IGI
IMP
8 references
retrieved
9 May 2019
stated in
5-fluorouracil enhances exosome-dependent accumulation of polyadenylated rRNAs
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Polyadenylation of rRNA in Saccharomyces cerevisiae.
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA.
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IGI
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IBA
nuclear polyadenylation-dependent CUT catabolic process
determination method or standard
IBA
IGI
IMP
5 references
retrieved
9 May 2019
stated in
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IMP
retrieved
9 May 2019
stated in
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005527
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IGI
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q12149
determination method or standard
IBA

Identifiers

 
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