A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression (Q24602399)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json

regulation of synapse organization

11 February 2020

main subject

non-coding RNA

0 references

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:1904739

Serine and arginine-rich splicing factor 1

1 reference

GOA release 2020-03-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference

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11 February 2020

1 reference

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11 February 2020

Kannanganattu V Prasanth

object named as

Kannanganattu V Prasanth

1 reference

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11 February 2020

Vidisha Tripathi

1 reference

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11 February 2020

David L Spector

1 reference

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11 February 2020

Delphine Bernard

1 reference

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11 February 2020

Sabrina Colasse

1 reference

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11 February 2020

Tetsuya Nakamura

1 reference

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11 February 2020

Zhenyu Xuan

1 reference

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11 February 2020

Michael Q Zhang

1 reference

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11 February 2020

Frédéric Sedel

1 reference

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11 February 2020

Fanny Coulpier

1 reference

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11 February 2020

language of work or name

English

0 references

publication date

20 August 2010

1 reference

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11 February 2020

1 reference

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11 February 2020

volume

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11 February 2020

issue

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11 February 2020

page(s)

3082-3093

1 reference

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Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

11 February 2020

cites work

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An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

7 April 2017

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MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles

7 April 2017

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MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

7 April 2017

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3' end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA

7 April 2017

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Fragile X syndrome: loss of local mRNA regulation alters synaptic development and function

7 April 2017

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Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation

7 April 2017

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Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

7 April 2017

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Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA

7 April 2017

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Specific expression of long noncoding RNAs in the mouse brain

7 April 2017

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Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

7 April 2017

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A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains

7 April 2017

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The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

7 April 2017

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Elongation of the Kcnq1ot1 transcript is required for genomic imprinting of neighboring genes

7 April 2017

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Neurexins induce differentiation of GABA and glutamate postsynaptic specializations via neuroligins

7 April 2017

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Foxo3a induces motoneuron death through the Fas pathway in cooperation with JNK

7 April 2017

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GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies

7 April 2017

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7 April 2017

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7 April 2017

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Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2.

7 April 2017

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Both phosphorylation and dephosphorylation of ASF/SF2 are required for pre-mRNA splicing in vitro

7 April 2017

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Genome-wide atlas of gene expression in the adult mouse brain

7 April 2017

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An RNA gene expressed during cortical development evolved rapidly in humans

7 April 2017

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7 April 2017

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7 April 2017

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A new mathematical model for relative quantification in real-time RT-PCR

7 April 2017

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Long non-coding RNAs: insights into functions

7 April 2017

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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

7 April 2017

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The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

7 April 2017

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Building excitatory and inhibitory synapses: balancing neuroligin partnerships

7 April 2017

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Regulating gene expression through RNA nuclear retention

7 April 2017

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A strategy for probing the function of noncoding RNAs finds a repressor of NFAT

7 April 2017

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SynCAM, a synaptic adhesion molecule that drives synapse assembly

7 April 2017

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The receptor tyrosine kinase EphB2 regulates NMDA-dependent synaptic function

7 April 2017

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Control of excitatory and inhibitory synapse formation by neuroligins

7 April 2017

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Non-coding RNAs: regulators of disease

7 April 2017

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Long noncoding RNAs: functional surprises from the RNA world

7 April 2017

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The SR protein family of splicing factors: master regulators of gene expression

7 April 2017

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MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

7 April 2017

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ESEfinder: A web resource to identify exonic splicing enhancers

7 April 2017

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The dynamics of a pre-mRNA splicing factor in living cells

7 April 2017

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Expression of a Delta homologue in prospective neurons in the chick

7 April 2017

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A single protocol to detect transcripts of various types and expression levels in neural tissue and cultured cells: in situ hybridization using digoxigenin-labelled cRNA probes

7 April 2017

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Son is essential for nuclear speckle organization and cell cycle progression

7 April 2017

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Spinal muscular atrophy: why do low levels of survival motor neuron protein make motor neurons sick?

27 September 2017

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Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs

27 September 2017

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X chromosome dosage compensation: how mammals keep the balance

27 September 2017

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Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock

27 September 2017

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Regulation of alternative splicing by reversible protein phosphorylation

27 September 2017

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27 September 2017

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Noncoding RNAs and intranuclear positioning in monoallelic gene expression

27 September 2017

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Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

27 September 2017

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27 September 2017

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27 September 2017

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Molecular biology of amyotrophic lateral sclerosis: insights from genetics

27 September 2017

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A large noncoding RNA is a marker for murine hepatocellular carcinomas and a spectrum of human carcinomas

27 September 2017

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Dosage compensation in mammals: fine-tuning the expression of the X chromosome

27 September 2017

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Non-coding RNAs in the nervous system

27 September 2017

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Molecular anatomy of a speckle

27 September 2017

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Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

27 September 2017

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Non-coding RNAs: new players in eukaryotic biology

27 September 2017

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Hypophosphorylated SR splicing factors transiently localize around active nucleolar organizing regions in telophase daughter nuclei

27 September 2017

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From silencing to gene expression: real-time analysis in single cells

27 September 2017

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Challenging the dogma: the hidden layer of non‐protein‐coding RNAs in complex organisms

27 September 2017

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Xist RNA and the mechanism of X chromosome inactivation

27 September 2017

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A working model of CaM kinase II activity in hippocampal long-term potentiation and memory

27 September 2017

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Synaptic clustering of AMPA receptors by the extracellular immediate-early gene product Narp.

27 September 2017

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Serine phosphorylation of SR proteins is required for their recruitment to sites of transcription in vivo

27 September 2017

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Intranuclear distribution of poly(A) RNA determined by electron microscope in situ hybridization

27 September 2017

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The nuclear matrix phosphoprotein p255 associates with splicing complexes as part of the [U4/Y6.U5]tri-snRNP particle

27 September 2017

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In vivo analysis of the stability and transport of nuclear poly(A)+ RNA.

27 September 2017

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Regulation of presynaptic cellular function. Biochemical studies using clonal neuronal cells

27 September 2017

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Selective localization of polyribosomes beneath developing synapses: A quantitative analysis of the relationships between polyribosomes and developing synapses in the hippocampus and dentate gyrus

27 September 2017

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Discrete nuclear domains of poly(A) RNA and their relationship to the functional organization of the nucleus

27 September 2017

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Assembly of presynaptic active zones from cytoplasmic transport packets

27 September 2017

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CaMKII regulates the density of central glutamatergic synapses in vivo

30 May 2018

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CaMKIIbeta functions as an F-actin targeting module that localizes CaMKIIalpha/beta heterooligomers to dendritic spines

30 May 2018

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Inhibitory synaptogenesis in mouse somatosensory cortex

30 May 2018

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The time course of synapse formation of mouse neuroblastoma cells in monolayer cultures

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

Protein-synthetic machinery at postsynaptic sites during synaptogenesis: a quantitative study of the association between polyribosomes and developing synapses

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

The distribution of synapsin I and synaptophysin in hippocampal neurons developing in culture

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

Morphologically identified glycinergic synapses in the hippocampus

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

Stages of synapse development defined by dependence on F-actin.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

The Prader-Willi syndrome imprinting center activates the paternally expressed murine Ube3a antisense transcript but represses paternal Ube3a

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

Stabilization of dendritic arbor structure in vivo by CaMKII.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944070

Selective capability of SynCAM and neuroligin for functional synapse assembly

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20729808

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SnapShot: Cellular bodies

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20729808

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/EMBOJ.2010.199

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

20729808

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20729808%20AND%20SRC:MED&resulttype=core&format=json