Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition (Q24532538)

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K Ihara

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M Shimizu

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Y Kyogoku

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N Ogawa

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Y Oshima

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T Hakoshima

Structure and function of the b/HLH/Z domain of USF

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language of work or name

English

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publication date

1 August 1997

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4689-97

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cites work

1 reference

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A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins

24 March 2017

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Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain

24 March 2017

1 reference

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Solvent content of protein crystals

24 March 2017

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Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

24 March 2017

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Improved methods for building protein models in electron density maps and the location of errors in these models

24 March 2017

1 reference

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Phosphorylation of the transcription factor PHO4 by a cyclin-CDK complex, PHO80-PHO85.

24 March 2017

1 reference

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Phosphate-regulated inactivation of the kinase PHO80-PHO85 by the CDK inhibitor PHO81.

24 March 2017

1 reference

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The two positively acting regulatory proteins PHO2 and PHO4 physically interact with PHO5 upstream activation regions

24 March 2017

1 reference

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CPF1, a yeast protein which functions in centromeres and promoters

24 March 2017

1 reference

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Isolation of the gene encoding the Saccharomyces cerevisiae centromere-binding protein CP1.

24 March 2017

1 reference

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Solvent-accessible surfaces of proteins and nucleic acids

24 March 2017

1 reference

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Slow-cooling protocols for crystallographic refinement by simulated annealing

7 April 2017

1 reference

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Structure and distribution of specific cis-elements for transcriptional regulation of PHO84 in Saccharomyces cerevisiae

7 April 2017

1 reference

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The loop region of the helix-loop-helix protein Id1 is critical for its dominant negative activity

27 September 2017

1 reference

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Base preferences for DNA binding by the bHLH-Zip protein USF: effects of MgCl2 on specificity and comparison with binding of Myc family members.

27 September 2017

1 reference

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Specific cis-acting sequence for PHO8 expression interacts with PHO4 protein, a positive regulatory factor, in Saccharomyces cerevisiae

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Discrimination between related DNA sites by a single amino acid residue of Myc-related basic-helix-loop-helix proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Impact of the Douglas-Hawthorne model as a paradigm for elucidating cellular regulatory mechanisms in fungi

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Single amino acid substitutions alter helix-loop-helix protein specificity for bases flanking the core CANNTG motif

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Promoter analysis of the PHO81 gene encoding a 134 kDa protein bearing ankyrin repeats in the phosphatase regulon of Saccharomyces cerevisiae

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Occurrence of bifurcated three-center hydrogen bonds in proteins.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Preliminary X-ray studies of a new crystal form of PHO4-DNA complex

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

New parameters for the refinement of nucleic acid-containing structures

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170095

Interaction of Saccharomyces cerevisiae Pho2 with Pho4 increases the accessibility of the activation domain of Pho4

29 November 2018

1 reference

12 December 2020

Mode of expression of the positive regulatory genes PHO2 and PHO4 of the phosphatase regulon in Saccharomyces cerevisiae

1 reference

12 December 2020

C-myc and the yeast transcription factor PHO4 share a common CACGTG-binding motif

1 reference

12 December 2020

The yeast regulatory gene PHO2 encodes a homeo box

1 reference

12 December 2020

Folding topology of the disulfide-bonded dimeric DNA-binding domain of the myogenic determination factor MyoD

1 reference

12 December 2020

Crystallographic characterization of a PHO4-DNA complex

1 reference

12 December 2020

Identifiers

DOI

10.1093/EMBOJ/16.15.4689

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PubMed publication ID

9303313

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