Recombinogenic flap ligation pathway for intrinsic repair of topoisomerase IB-induced double-strand breaks (Q39456436)

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Language	Label	Description	Also known as
English	Recombinogenic flap ligation pathway for intrinsic repair of topoisomerase IB-induced double-strand breaks	scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

Recombinogenic flap ligation pathway for intrinsic repair of topoisomerase IB-induced double-strand breaks (English)

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

author name string

C Cheng

1

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

S Shuman

2

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

language of work or name

0 references

publication date

1 November 2000

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

Molecular and Cellular Biology

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

20

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

21

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

8059-8068

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

Stereochemical outcome and kinetic effects of Rp- and Sp-phosphorothioate substitutions at the cleavage site of vaccinia type I DNA topoisomerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Characterization of protein kinase chk1 essential for the cell cycle checkpoint after exposure of human head and neck carcinoma A253 cells to a novel topoisomerase I inhibitor BNP1350

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Yeast gene for a Tyr-DNA phosphodiesterase that repairs topoisomerase I complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Structural flexibility in human topoisomerase I revealed in multiple non-isomorphous crystal structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

The nuclease activity of Mre11 is required for meiosis but not for mating type switching, end joining, or telomere maintenance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

The cloning and expression of human deoxyribonuclease II. A possible role in apoptosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Nuclease activities in a complex of human recombination and DNA repair factors Rad50, Mre11, and p95

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

The 3' to 5' exonuclease activity of Mre 11 facilitates repair of DNA double-strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Conservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Molecular organization in site-specific recombination: the catalytic domain of bacteriophage HP1 integrase at 2.7 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Flexibility in DNA recombination: structure of the lambda integrase catalytic core

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Effects of uracil incorporation, DNA mismatches, and abasic sites on cleavage and religation activities of mammalian topoisomerase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

A eukaryotic enzyme that can disjoin dead-end covalent complexes between DNA and type I topoisomerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Identification of contacts between topoisomerase I and its target DNA by site-specific photocrosslinking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Topoisomerase I involvement in illegitimate recombination in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

A novel mutation in DNA topoisomerase I of yeast causes DNA damage and RAD9-dependent cell cycle arrest.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Vaccinia DNA topoisomerase I: single-turnover and steady-state kinetic analysis of the DNA strand cleavage and ligation reactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

The kinetics of spontaneous DNA branch migration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

DNA synthesis and topoisomerase inhibitors increase transduction by adeno-associated virus vectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Proteolytic footprinting of vaccinia topoisomerase bound to DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

A novel suicide substrate for DNA topoisomerases and site-specific recombinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

The double-strand-break repair model for recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

DNA breakage and closure by rat liver type 1 topoisomerase: separation of the half-reactions by using a single-stranded DNA substrate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Vaccinia DNA topoisomerase I promotes illegitimate recombination in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Recombination mediated by vaccinia virus DNA topoisomerase I in Escherichia coli is sequence specific

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Site-specific interaction of vaccinia virus topoisomerase I with duplex DNA. Minimal DNA substrate for strand cleavage in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

12 September 2017

Mechanism of DNA transesterification by vaccinia topoisomerase: catalytic contributions of essential residues Arg-130, Gly-132, Tyr-136 and Lys-167.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

14 September 2017

NUC-1, a caenorhabditis elegans DNase II homolog, functions in an intermediate step of DNA degradation during apoptosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

14 September 2017

Intermediates of recombination during mating type switching in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

25 September 2017

Catalytic mechanism of DNA topoisomerase IB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

Vaccinia virus DNA topoisomerase: a model eukaryotic type IB enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

Crystal structure of the site-specific recombinase, XerD.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

Association of crossover points with topoisomerase I cleavage sites: a model for nonhomologous recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

Characterization of vaccinia virus DNA topoisomerase I expressed in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

Two classes of DNA end-joining reactions catalyzed by vaccinia topoisomerase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

17 June 2018

DNA strand transfer catalyzed by vaccinia topoisomerase: peroxidolysis and hydroxylaminolysis of the covalent protein-DNA intermediate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

21 August 2018

Specific DNA cleavage and binding by vaccinia virus DNA topoisomerase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=86416

21 August 2018

The topoisomerase I poison camptothecin generates a Chk1-dependent DNA damage checkpoint signal in fission yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-specific DNA transesterification by vaccinia topoisomerase: role of specific phosphates and nucleosides

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intra- and intermolecular strand transfer by HeLa DNA topoisomerase I

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA strand transfer reactions catalyzed by vaccinia topoisomerase I

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of intra- and intermolecular DNA ligation mediated by eukaryotic topoisomerase I. Role of bipartite DNA interaction in the ligation process

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vaccinia topoisomerase binds circumferentially to DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel approach to molecular cloning and polynucleotide synthesis using vaccinia DNA topoisomerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

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Vaccinia DNA topoisomerase I: kinetic evidence for general acid-base catalysis and a conformational step

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human DNA topoisomerase I-mediated cleavages stimulated by ultraviolet light-induced DNA damage

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

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Vaccinia DNA topoisomerase I: evidence supporting a free rotation mechanism for DNA supercoil relaxation

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic Analysis of DNA and RNA Strand Transfer Reactions Catalyzed by Vaccinia Topoisomerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trapping of mammalian topoisomerase I and recombinations induced by damaged DNA containing nicks or gaps. Importance of DNA end phosphorylation and camptothecin effects

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

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Mechanism of action of eukaryotic DNA topoisomerase I and drugs targeted to the enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

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The response of eukaryotic topoisomerases to DNA damage

1 reference

https://pubmed.ncbi.nlm.nih.gov/11027276

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.20.21.8059-8068.2000

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

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