Insertional mutagenesis strategies in zebrafish. (Q36187555)

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English	Insertional mutagenesis strategies in zebrafish.	scientific article

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scholarly article

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Europe PubMed Central

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28 December 2019

2 references

Europe PubMed Central

5 August 2020

Insertional mutagenesis strategies in zebrafish (English)

1 reference

Europe PubMed Central

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28 December 2019

0 references

genetic variation

1 reference

14 September 2019

biomedical investigative technique

1 reference

19 September 2019

1 reference

22 October 2019

insertional mutagenesis

1 reference

5 August 2020

Darius Balciunas

2

1 reference

Europe PubMed Central

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28 December 2019

Stephen C Ekker

4

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28 December 2019

author name string

Sridhar Sivasubbu

1

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28 December 2019

Adam Amsterdam

3

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28 December 2019

publication date

1 January 2007

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28 December 2019

7 references

20 June 2019

30 June 2019

14 September 2019

19 September 2019

22 October 2019

Europe PubMed Central

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28 December 2019

5 August 2020

8 Suppl 1

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28 December 2019

S9

1 reference

Europe PubMed Central

PMC publication ID

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28 December 2019

Trapping fish genes with transposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Harnessing a high cargo-capacity transposon for genetic applications in vertebrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Functional dissection of the Tol2 transposable element identified the minimal cis-sequence and a highly repetitive sequence in the subterminal region essential for transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Trans-kingdom transposition of the maize dissociation element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Mutagenesis strategies in zebrafish for identifying genes involved in development and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Engineering mutations: deconstructing the mouse gene by gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Transgenes as screening tools to probe and manipulate the zebrafish genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Large-scale enhancer detection in the zebrafish genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Genomewide production of multipurpose alleles for the functional analysis of the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Fishing for answers with transposons.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Suppression of nonsense-mediated mRNA decay permits unbiased gene trapping in mouse embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Gene trap and gene inversion methods for conditional gene inactivation in the mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Target-selected gene inactivation in zebrafish.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Integration target site selection for retroviruses and transposable elements.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Enhancer trapping in zebrafish using the Sleeping Beauty transposon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Identification of 315 genes essential for early zebrafish development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

A transposon-mediated gene trap approach identifies developmentally regulated genes in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Insertional mutagenesis in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Transcription start regions in the human genome are favored targets for MLV integration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

A zebrafish sox9 gene required for cartilage morphogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Evolutionary conservation of zebrafish linkage group 14 with frequently deleted regions of human chromosome 5 in myeloid malignancies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

High-throughput selection of retrovirus producer cell lines leads to markedly improved efficiency of germ line-transmissible insertions in zebra fish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

The art and design of genetic screens: zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

vhnf1, the MODY5 and familial GCKD-associated gene, regulates regional specification of the zebrafish gut, pronephros, and hindbrain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Gene-trap mutagenesis: past, present and beyond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Efficient chromosomal transposition of a Tc1/mariner- like transposon Sleeping Beauty in mice.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Transposition and gene disruption in the male germline of the mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Initial sequencing and analysis of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

The Sequence of the Human Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Zebrafish comparative genomics and the origins of vertebrate chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Effective targeted gene 'knockdown' in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

The syntenic relationship of the zebrafish and human genomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Zebrafish mutations and functional analysis of the vertebrate genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

RET: a poly A-trap retrovirus vector for reversible disruption and expression monitoring of genes in living cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

A large-scale insertional mutagenesis screen in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Generalized lacZ expression with the ROSA26 Cre reporter strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Comprehensive mammalian genetics: history and future prospects of gene trapping in the mouse.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Architectural limits on split genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

An induction gene trap screen in embryonic stem cells: Identification of genes that respond to retinoic acid in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

A large-scale gene-trap screen for insertional mutations in developmentally regulated genes in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Genetics and early development of zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Germ line integration and Mendelian transmission of the exogenous Moloney leukemia virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

1 October 2017

Transposon-mediated gene trapping in zebrafish.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

Tol2 transposon-mediated enhancer trap to identify developmentally regulated zebrafish genes in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

Aquarius, a novel gene isolated by gene trapping with an RNA-dependent RNA polymerase motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

Insertional mutagenesis and rapid cloning of essential genes in zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

An efficient gene-trap method using poly A trap vectors and characterization of gene-trap events

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

Mouse embryonic stem cells and reporter constructs to detect developmentally regulated genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

2 July 2018

The zebrafish mutant vps18 as a model for vesicle-traffic related hypopigmentation diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Gene-breaking: a new paradigm for human retrotransposon-mediated gene evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Construction and detection of fluorescent, germline transgenic zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Efficient poly A trap approach allows the capture of genes specifically active in differentiated embryonic stem cells and in mouse embryos.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

A genetic screen for mutations affecting embryogenesis in zebrafish.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Transposable element in fish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

A new strategy of gene trapping in ES cells using 3'RACE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2106850

23 September 2018

Region-specific saturation germline mutagenesis in mice using the Sleeping Beauty transposon system

1 reference

https://pubmed.ncbi.nlm.nih.gov/18047701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene trap integrations expressed in the developing heart: insertion site affects splicing of the PT1-ATG vector

1 reference

https://pubmed.ncbi.nlm.nih.gov/18047701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene-breaking transposon mutagenesis reveals an essential role for histone H2afza in zebrafish larval development

1 reference

https://pubmed.ncbi.nlm.nih.gov/18047701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficiency assessment of the gene trap approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/18047701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/GB-2007-8-S1-S9

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18047701%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Dimensions Publication ID

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18047701%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18047701%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

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