Multiple Choice Questions: Energy and Metabolism
Multiple Choice Questions: Energy and Metabolism
Multiple Choice Questions: Energy and Metabolism
Chapter 06
Energy and Metabolism
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Chapter 06 - Energy and Metabolism
4. The energy needed to destabilize existing chemical bonds and start a chemical reaction is
called
A. activation energy
B. free energy
C. kinetic energy
D. potential energy
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Chapter 06 - Energy and Metabolism
5. Based on the graph, what are the optimal temperatures for the human enzyme and
hotsprings prokaryote enzyme?
A. The optimal temperature for the human enzyme is 30 degrees C. The optimal temperature
for the hotsprings prokaryote enzyme is 60 degrees C.
B. The optimal temperature for the human enzyme is 40 degrees C. The optimal temperature
for the hotsprings prokaryote enzyme is 72 degrees C.
C. The optimal temperature for the human enzyme is 46 degrees C. The optimal temperature
for the hotsprings prokaryote enzyme is 79 degrees C.
D. The optimal temperature for the human enzyme is 35 degrees C. The optimal temperature
for the hotsprings prokaryote enzyme is 65 degrees C.
Fat molecules have many bonds, and breaking those bonds provides energy, as discussed in
the text. Therefore, these macromolecules are a convenient way of storing energy, and stored
energy is considered potential energy. Human cells cannot perform photosynthesis. Breaking
down macromolecules is an exergonic process.
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Chapter 06 - Energy and Metabolism
6. A drug binds to the active site of an enzyme. If it is bound to the active site of the enzyme,
it prevents substrate binding. This drug would be considered a
A. noncompetitive inhibitor.
B. allosteric inhibitor.
C. allosteric activator.
D. competitive inhibitor.
7. A particular reaction has a negative delta G. However, this reaction takes many years to
proceed in the absence of enzyme. Why is this the case?
A. This reaction does not obey the second law of thermodynamics
B. This reaction does not proceed spontaneously
C. The initial free energy of the reactants is much less than the final free energy of the
products
D. A certain amount of activation energy is required for the reaction to proceed
Reactions with a negative delta G proceed spontaneously, but not instantaneously. They need
a certain amount of activation energy to proceed.
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Chapter 06 - Energy and Metabolism
8. A molecule that closely resembles the shape of a substrate for an enzyme would most
likely serve as a
A. noncompetitive inhibitor.
B. allosteric inhibitor.
C. competitive inhibitor.
D. allosteric activator.
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about enzymes and inhibition? What other information is
related to the question?
· To solve this problem you’ll need to apply what you know about the different ways
thatenzyme inhibition can occur and molecular shape and determine the most likely role for a
molecule with similar shape to the substrate. Recall that enzyme function can be inhibited
competitively, noncompetitively, and allosterically. Why is the shape of substrate molecules
important, and what possible role could a molecule that mimics the substrate’s shape play in
enzyme function?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of enzymes and inhibitionto determine what the most likely function would be for a molecule
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9. Oxidation and reduction reactions are chemical processes that result in a gain or loss of:
A. atoms.
B. neutrons.
C. electrons.
D. molecules.
E. protons.
10. The synthesis of sugar molecules through the process of photosynthesis requires energy
absorbed from sunlight. Bearing this in mind, what kind of reaction is photosynthesis?
A. exergonic
B. endergonic
C. catabolic
D. feedback
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11. A particular chemical reaction is exergonic. What can you say about the relationship
between the reactants and the products in this exergonic reaction?
A. The reactants have more free energy than the products
B. The reactants are likely more disordered and the products are likely more ordered
C. The reactants cannot spontaneously react to generate the products
D. The reactants likely have lower enthalpy than the products
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about the energy associated with reactants and products in
reactions? What other information is related to the question?
· To solve this problem you’ll need to apply what you know about the free energy
associated with reactants and products and determine how it is associated with exergonic and
endergonic reactions. What free energy characteristics determine whether or not a reaction is
exergonic (spontaneous) or endergonic (nonspontaneous)?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of reactions and free energy to determine the energy characteristics for an exergonic reaction.
· If you got an incorrect answer, did you remember that reactions can be classified as
exergonic and endergonic based on whether or not their change in free energy is positive or
negative? Did you remember that exergonic reactions have a negative delta G and endergonic
reactions have a positive delta G? Were you able to infer from this information that the
reactant must have more free energy than the products in order to obtain a negative delta G?
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Chapter 06 - Energy and Metabolism
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12. Kinases are enzymes that can phosphorylate (transfer phosphate groups
onto) macromolecules such as proteins. A particular kinase, Kinase 1 is known to promote cell
division. It promotes cell division by phosphorylating Protein X. Phosphorylation of Protein
X activates Protein X. Once activated, Protein X stimulates the production of other proteins
such as Protein Y and Z that directly promote cell division. In order to function, Kinase 1
requires the presence of Metal A. However, in the presence of Protein A, Kinase 1 is
nonfunctional. From the description, what is considered the substrate of Kinase 1?
A. Protein X
B. Protein Y
C. Protein Z
D. Metal A
E. Protein A
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Chapter 06 - Energy and Metabolism
13. Kinases are enzymes that can phosphorylate (transfer phosphate groups
onto) macromolecules such as proteins. A particular kinase, Kinase 1 is known to promote
cell division. It promotes cell division by phosphorylating Protein X. Phosphorylation of
Protein X activates Protein X. Once activated, Protein X stimulates the production of other
proteins such as Protein Y and Z that directly promote cell division. In order to function,
Kinase 1 requires the presence of Metal A. However, in the presence of Protein A, Kinase 1 is
nonfunctional. From the description, what is considered a cofactor of Kinase 1?
A. Protein X
B. Protein Y
C. Protein Z
D. Metal A
E. Protein A
Metal A is required for Kinase 1 to function, and thus is a cofactor for this kinase.
14. Hexokinase is an enzyme that binds specifically to glucose and converts it into glucose 6-
phosphate. The activity of hexokinase is suppressed by glucose 6-phosphate, which binds to
hexokinase at a location that is distinct from the active site. This is an example of.
A. feedback inhibition.
B. competitive inhibition.
C. cofactor binding.
D. allosteric activation.
In this case, the product of the reaction, glucose 6-phosphate, is feeding back to inhibit the
enzyme that catalyzes the reaction, hexokinase. As a result, this is an example of feedback
inhibition.
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Chapter 06 - Energy and Metabolism
15. The organic non-protein components that aid in enzyme functioning are called
A. reactants.
B. cofactors.
C. coenzymes.
D. substrates.
E. products.
16. The inorganic non-protein components that participate in enzyme catalysis are known as
A. coenzymes.
B. cofactors.
C. products.
D. substrates.
E. reactants.
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Chapter 06 - Energy and Metabolism
17. Many metabolic pathways are ultimately concerned with ATP; either with the generation
of ATP, or with the requirement of ATP for that pathway to function. Why is ATP so
important to metabolism?
A. Hydrolysis of ATP is used to drive exergonic reactions
B. Hydrolysis of the bond between adenine and ribose in ATP is commonly used to release
energy that can be used to drive other cellular reactions
C. The phosphate groups of ATP are held together by unstable bonds that can be broken to
release energy
D. ATP is a protein that serves as the energy currency of cells
ATP does serve as the energy currency of cells, by storing energy in its triphosphate group.
By cleaving the unstable bonds holding the phosphates together in the ATP molecule, energy
can be released to drive endergonic reactions. ATP can also be used as a building block for
RNA molecules. It is not a protein.
18. The chemistry of living systems representing all chemical reactions is called
A. catabolism.
B. anabolism.
C. metabolism.
D. enzymology.
E. thermodynamics.
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Chapter 06 - Energy and Metabolism
19. A calorie is the commonly used unit of chemical energy. It is also the unit of
A. light.
B. magnetism.
C. sound.
D. heat.
E. radioactivity.
20. The term oxidation is derived from the name of the element oxygen. This is reasonable,
because oxygen
A. attracts electrons very strongly.
B. can be oxidized by accepting electrons.
C. contains more electrons than are needed.
D. passes electrons to many other types of molecules.
21. When an atom or molecule gains one or more electrons, it is said to be:
A. energized.
B. oxidized.
C. polarized.
D. reduced.
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Chapter 06 - Energy and Metabolism
22. The ultimate source of energy for humans comes from what source?
A. The sun
B. Plants
C. Water
D. Air
E. Animals
23. Glucose is broken down through cellular respiration, which involves a large number of
chemical reactions. At the end of the cellular respiration process, a large number of ATP
molecules are generated, but yet, not all of the possible energy that is contained in a molecule
of glucose can be harnessed through these chemical reactions to generate ATP. In other
words, during cellular respiration, not all of the energy that is contained in a molecule of
glucose is converted into the energy stored in ATP. What happens to the remaining energy?
A. It is destroyed
B. It is used to drive exergonic reactions
C. It is donated to molecules in the cellular respiration process to reduce them
D. It is lost as heat
It is lost as heat. In fact, this is one of the ways we maintain our body temperature.
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Chapter 06 - Energy and Metabolism
24. The Law of Thermodynamics that states that energy cannot be created or destroyed is:
A. The First Law of Thermodynamics
B. The Second Law of Thermodynamics
C. The Third Law of Thermodynamics
D. The Fourth Law of Thermodynamics
25. The Law of Thermodynamics that states that increases in entropy are favored is:
A. The First Law of Thermodynamics
B. The Second Law of Thermodynamics
C. The Third Law of Thermodynamics
D. The Fourth Law of Thermodynamics
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Chapter 06 - Energy and Metabolism
26. A current problem in modern medicine is the development of drug resistance mutations.
This occurs when a mutation arises in a disease-causing microbe making it resistant to a drug
and thus rendering the drug useless in treating a specific disease. Many useful drugs are
competitive inhibitors of specific enzymes, and the drug-resistance mutations prevent the
binding of the drug. These types of mutations, in addition to preventing competitive inhibitor
binding, can also sometimes reduce the activity of the enzyme. Why is that the case? rev:
01_20_2015_QC_CS-4567
A. Binding to the competitive inhibitor is essential for the function of the enzyme
B. These mutations most likely affect an allosteric site on the enzyme
C. These mutations lower the activation energy of the reaction catalyzed by the enzyme
D. These mutations most likely change the shape of the active site of the enzyme
6-19
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about enzymes and how their activity is regulated? How does
this drug affect enzyme activity under normal circumstances? What other information is
related to the question?
· Remember that the activity of an enzyme is directly related to its structure and
function. Recall that there are several structural elements of an enzyme that affect its function;
these include the active site and the allosteric site. These structural elements as well as
inhibitors influence an enzyme’s ability to facilitate reactions. The question also indicates that
the drug acts as a competitive inhibitor of the enzyme. Considering the structure and function
of enyzmes, which most directly affected by bacterial drug resistance that reduces enzyme
activity?
Choose Answer
Do you have all necessary information to analyze how drug resistance would reduce
enzyme activity?
· The first major clue in this question is that the drug is a competitive inhibitor of the
enzyme, and that microbial changes in the enzyme’s structure render the drug ineffective.
Recall that competitive inhibitors mimic the shape of a substrate, which binds to the active
site. This information implies that the shape of the drug was a close match to the substrate in
order to be competitive inhibitor in the first place.
· A second major clue is the mutation in the bacterium that also renders the drug
ineffective.
· These two lines of evidence imply that the active site of the enzyme must be directly
involved, since neither the allosteric site nor the activation energy of the enzyme would be
affected.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze possible reasons for why a previously-effective
drug that works as a competitive inhibitor is rendered ineffective by bacterial mutation.
· If you got the answer correct, well done! If you got an incorrect answer, were you able
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Chapter 06 - Energy and Metabolism
to break down the structural elements of the enzyme into the active and allosteric sites? Were
you able to correlate the two lines of evidence of the drug being a competitive inhibitor and
the bacterial mutation eliminating drug effectiveness? Were you able to infer from this
evidence that the active site was the most likely aspect of the enzyme to be affected?
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Chapter 06 - Energy and Metabolism
27. Tacrolimus (FK-506) is a drug that inhibits an enzyme called calcineurin. Calcineurin is
a protein phosphatase. This is an enzyme that dephosphorylates (removes phosphate groups)
from proteins. When added to cells, tacrolimus can inhibit the dephosphorylation of a protein
called NFAT, but it cannot prevent the dephosphorylation of a protein called CDK1. What is
the most likely explanation for this finding?
A. Calcineurin requires an additional cofactor to dephosphorylate NFAT
B. NFAT is a substrate of calcineurin, but CDK1 is not
C. Tacrolimus is a competitive inhibitor of calcineurin for NFAT and CDK11
D. Tacrolimus changes the optimum pH for calcineurin
6-23
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about phosphates and enzymestructure? What other
information is related to the question?
· Since calcineurin is an enzyme, that means it works to convert substrates to products –
just like any other enzyme. In the case of this enzyme, calcineurin dephosphorylates other
proteins. The trick to answering this question correctly is to try and decipher how NFAT and
CDK1 relate to calcineurin.
· Let’s consider the options. How would calcineurin function if NFAT were a cofactor?
A substrate? How might tacrolimus work if it were a competitive inhibitor of calcineurin? Is it
possible for tacrolimus to change the operating pH of calcineurin? If you take it one step at a
time, what is the likely role of calcineurin on NFAT and CDK1?
Choose Answer
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Chapter 06 - Energy and Metabolism
Do you have all necessary information to analyze how tacrolimus works on NFAT and
CDK1?
· It is unlikely that tacrolimus would affect calcineurin’spH.Enyzmes operate in very
specific pH ranges and if tacrolimus affected pH, other enzymes besides calcineurin would
also be affected.
· The question mentions nothing about any cofactors needed for calcineurin to
dephosphorylate NFAT.
· If tacrolimus were a competitive inhibitor of calcineurin, it would interact with the
enzyme as a substrate but prevent calcineurin’sdephosphorylation activity, leading to greater
phosphorylation of NFAT and CDK1. The question indicates that tacrolimus acts to prevent
dephosphorylation of NFAT but not CDK1, so that answer is not plausible.
· That leaves NFAT as a substrate of calcineurin, which makes sense when you consider
that adding tacrolimus prevents NFAT being dephosphorylated by calcineurin. CDK1 is
unaffected, as indicated in the question.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
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· This question asked you to determine the likely explanation for relationships between
calcineurin, NFAT, and CDK1 proteins based on tacrolimus treatment.
· If you got the answer correct, good job! If you got an incorrect answer, were you able
to decipher that tacrolimus resulted in less calcineurin activity and therefore less NFAT
dephosphorylation? Were you able to correlate the activity of calcineurin and NFAT together?
Were you infer that their relationship would only be possible if NFAT were a substrate for
calcineurin?
28. RNA molecules that also act as enzymes are given the name
A. ribozymes
B. cofactors
C. coenzymes
D. allosteric enzymes
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Chapter 06 - Energy and Metabolism
30. When the substrate is bound to the enzyme, the shape of the enzyme may change slightly,
leading to
A. an induced fit
B. a great range of possible catalytic activities
C. a greater supply of activation energy
D. more permanent binding through intimate total contact
E. more possible products of the reaction
31. In order to reuse an enzyme after the conclusion of an enzyme catalyzed reaction, what
must occur?
A. the enzyme has to be resynthesized
B. the enzyme has to separate itself from the product
C. changes into an active form
D. the enzyme has to decrease entropy
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Chapter 06 - Energy and Metabolism
32. You are working with a specific enzyme-catalyzed reaction in the lab. You are a very
careful experimentalist, and as a result, at the beginning of each of your experiments, you
measure the temperature in the lab. On days 1 through 5, the temperature in the lab was 20oC.
Today is day 6 of your experiment, and the temperature in the lab is 30oC. How do you
predict that this will alter the rate of your enzyme-catalyzed reaction?
A. It will decrease the rate
B. It will increase the rate
C. It could possibly increase or decrease the rate
D. it will not affect the rate
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about enzyme rates and temperature? What other information
is related to the question?
· Remember that temperature affects protein structure and function, and as such can
influence enzyme rate of reaction because enzymes are proteins. The real question here is to
predict how a 10 degree temperature change might affect enzyme reaction rate.
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to evaluate by predicting the effects of environmental
temperature on enzyme reaction rates.
· If you got the answer correct, good job! If you got an incorrect answer, did you
remember that enzymes are proteins, and that temperature affects protein structure and
function? Did you recall that enzymes operate best at an optimal temperature? Were you able
to determine that enzyme rate could increase or decrease due to the 10 degree environmental
temperature change?
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Chapter 06 - Energy and Metabolism
33. Metabolic reactions fall under two general categories: anabolic and catabolic. What type
of chemical reactions are these two classes of metabolic reactions?
A. Anabolic reactions are exergonic reactions, whereas catabolic reactions are endergonic.
B. Both anabolic and catabolic reactions are exergonic.
C. Both anabolic and catabolic reactions are endergonic.
D. Anabolic reactions are endergonic reactions, whereas catabolic reactions are exergonic.
34. Under standard conditions, ATP can release for every molecule converted to ADP
A. less than 1 cal of energy.
B. 1 to 2 cal of energy.
C. 7.3 Kcal of energy.
D. different amounts of energy depending on the cell.
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Chapter 06 - Energy and Metabolism
35. Glucose is converted into glucose 6-phosphate by hexokinase. Glucose 6-phosphate then
serves as the substrate for the enzyme phosphoglucose isomerase, which converts this reactant
into fructose 6-phosphate. Fructose 6-phosphate serves as the substrate for
phosphofructokinase, which converts fructose 6-phosphate into fructose 1,6-bisphosphate.
Based on the information provided, this is an example of what?
A. Feedback inhibition
B. Allosteric regulation
C. A metabolic pathway
D. Enzyme inhibition
36. In an experiment described in a chemistry lab book, the directions state that after mixing
two chemicals (A and B) and waiting 5 minutes that A will be oxidized. This means that:
A. chemical A has lost electrons to chemical B.
B. chemical A has gained electrons from chemical B.
C. chemical A has gained energy in the form of heat from chemical B.
D. chemical A has lost energy in the form of heat to chemical B.
E. chemical A has reacted with oxygen.
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about oxidation and reduction chemical reactions? What other
information is related to the question?
· Remember that many chemical processes participate in oxidation and reduction
(redox) reactions. Oxidation reactions occur when electrons are liberated from a molecule
whereas reduction reactions occur when electrons are added to a molecule. Reduction is
frequently associated with addition of hydrogen atoms as well.
· As you may remember, redox reactions are quite common in biochemical pathways
such as the reactions described in the question. Given what you know about the participants in
redox reactions, what happens to NAD+ when it becomes NADH?
Choose Answer
Do you have all the information needed to determine the correct answer?
· Redox reactions involve one molecule becoming oxidized and another molecule
becoming reduced via the removal and addition of electrons, respectively.
· NAD+ is a molecular acceptor of electrons, and is therefore an oxidized molecule.
The question indicates that NADH is a product of the reaction. So what is the relationship
between NAD+ and NADH?
· When NAD+ accepts electrons, it becomes reduced. The reduced form of NAD+ is
therefore NADH.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to determine what happens to NAD+ in the reaction.
· If you got the answer correct, good work! If you got an incorrect answer, did you
remember how redox reactionsoccur? Were you able to identify which molecules participated
in redox reactions? Were you able to discover what happened to NAD+ when it became
NADH?
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know about free energy in enzymatic reactions? What other
information is related to the question?
· To solve this problem you’ll need to apply what you know about free energy and how
it is associated with different types of enzyme reactions. What free energy characteristics
determine whether a reaction will occur or not?
· What clues does the question give you about delta G? Does the reaction require the
breakdown of ATP or produce ATP? What types of reaction require ATP hydrolysis in order to
run?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of enzymes and free energy to determine what the free energy change would be for the
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Chapter 06 - Energy and Metabolism
reaction.
· If you got an incorrect answer, did you remember that enzyme reactions can be
classified as exergonic and endergonic based on whether or not their change in free energy is
positive or negative? Did you remember that exergonic reactions have a negative delta G and
endergonic reactions have a positive delta G? Were you able to see that ADP eventually
formed ATP and infer that the reaction would have to be exergonic and therefore have a
negative delta G?
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Chapter 06 - Energy and Metabolism
39. For a particular chemical reaction, the enthalpy of the reactants is -400 kJ. The enthalpy
of the products is -390 kJ. The entropy of the reactants is 0.2 kJ/K. The entropy of the
products is 0.3 kJ/K. The temperature of the reaction is 25 degrees Celsius. What can you
conclude about this reaction?
A. It is exergonic
B. It is endergonic
C. it is a redox reaction
D. It is being catalyzed by an enzyme
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Chapter 06 - Energy and Metabolism
Clarify Question
Gather Content
What do you already know aboutenergy of reactants and products in a reaction? What
other information is related to the question?
· Remember that the total energy (enthalpy or H) in a chemical system is equal to the
amount of free energy (G) minus the amount of disorder (entropy) at a particular temperature
(T, in Kelvin). Thus, H = G – TS.
· Recall also that delta G equals the difference in energy level from the beginning to the
end of the reaction, such that delta G = delta H – T(delta S). Consider also that reactions that
have a negative delta G are considered to be exergonic (spontaneous), whereas positive delta
G reactions are endergonic (nonspontaneous).
· How is the overall delta G of a reaction determine once you have values for total
energy (enthalpy) and wasted energy (entropy)?
Choose Answer
Do you have all the information needed to make a determination about the change in free
energy?
· Recall that delta G refers to the amount of energy that changes from the beginning to
the end of the reaction, and is equal to the total change in enthalpy (delta H) minus the
product of temperature (T, in Kelvin) and disorder (S).
· Let’s unpack this solution by first comparing the total energy between products and
reactants. If you compare the enthalpy (total energy) of the products and reactants, you will
find the change in enthalpy is -390kJ –(-400kJ), which equals 10kJ.
· Next let’s determine the disorder component, which is the product of entropy and
temperature in Kelvin. Change in entropy is 0.3kJ/K – 0.2kJ/K and equals 0.1 kJ/K. The
temperature in Kelvin is 25 degrees Celsius + 273K and equals 298K.
· Finally, the change in free energy is determined by change in enthalpy minus the
disorder component. Thus, delta G = (10-(298*0.1)), which equals (10-29.8), which produces
a final answer of -19.8. Since the change in free energy is negative for this reaction, it is
exergonic. Note that it cannot be concluded from the description whether this is a redox
reaction, or whether it is being catalyzed by an enzyme.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
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process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze energy characteristics for a reaction to determine
whether it is exergonic, endergonic, redox, or enzyme-catalyzed.
· If you got the answer correct, well done! This was a more challenging problem to
solve.If you got an incorrect answer, did you recall how delta G is different between
exergonic and endergonic reactions? Were you able to calculate the change in free energy
based on the information provided? Based on that information, were you able to show the
reaction had a negative delta Gand based on that must be exergonic?
40. Does ADP contain the capacity to provide energy for the cell?
A. No. ADP does not contain any bonds that can be broken to provide energy for the cell.
B. Yes. ADP has the same capacity to provide energy for the cell as ATP.
C. Yes. Cleaving the bond between the ribose sugar and the two phosphate groups can
provide energy for the cell.
D. Yes. Cleaving the bond between the terminal phosphate and the phosphate attached to the
ribose sugar can provide energy for the cell.
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41. AMP-activated protein kinase (AMPK) is an enzyme that is activated by high levels of
AMP in cells. If levels of AMP are high in cells, that means that levels of ATP are low. Once
active, AMPK activates catabolic pathways and inhibits anabolic pathways in the cell. Why
do you think that is the case? Choose the answer that best explains the role of AMPK.
A. High levels of AMP indicate that there is a high amount of energy stored in the cell, thus
activating catabolic pathways and inhibiting anabolic pathways are mechanisms to use stored
energy.
B. By inhibiting anabolic pathways, AMPK provides a mechanism to generate heat for the
cell, which is important if AMP levels are high in the cell.
C. By activating catabolic pathways, AMPK provides a mechanism to activate exergonic
pathways, which is important if AMP levels are high in the cell.
D. Activating catabolic pathways and inhibiting anabolic pathways will ultimately lead to
higher consumption of ATP, which is important if AMP levels are high in the cell.
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Clarify Question
Gather Content
What do you already know about AMP, ADP, and ATP in cells? What other information is
related to the question?
· Remember that ATP is the energy currency of the cell. High levels of ATP indicate the
cell is fully powered and has the energy reserves it needs to conduct cellular work. Recall also
that ADP and AMP are lower-level and lowest-level energy molecules, respectively.
· If the cell is in an energy deficit, which molecule will be most prevalent: ATP, ADP, or
AMP?
Choose Answer
Do you have all the information needed to make a determination about the change in free
energy?
· If AMP levels are high in the cell, this indicates that energy levels in the cell are low.
This in turn means that the cell would have lower levels of ATP, the high-energy currency of
the cell.
· Recall that AMP can be converted to ADP and then to ATP by adding inorganic
phosphate. When energy levels are low (AMP), the cell needs to generate more high energy
molecules (ATP). This requires the cell to turn on energy-generating exergonic pathways and
turn offendergonic pathways that require energy. Since reactions that break chemical bonds in
molecules are required to capture stored energy and generate ATP, and reactions that require
energy to build molecules are less needed, AMPK will most likely activate catabolic pathways
and inhibit anabolic pathways.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze the most likely role of AMPK in cells when AMP
levels are high and ATP levels are low.
· If you got the answer correct, congratulations! If you got an incorrect answer, were
you able to correlate AMP levels with low energy and ATP levels with high energy in the cell?
Were you able to determine that catabolic reactions are required to generate ATP and anabolic
reactions require ATP? Were you able to connect the two ideas together to determine
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that high AMP levels would lead to increased catabolic (exergonic) and decreased anabolic
(endergonic) reactions?
42. You are studying an enzyme-catalyzed reaction that induces a particular cellular activity
in the lab. If you wanted to slow down that particular cellular activity by controlling the
enzyme, what could you do?
A. Decrease the temperature of the incubator where the cells are growing
B. Increase the pH of the media the cells are growing in to the optimum pH
C. Add cofactors to the media the cells are growing in
D. Add an allosteric activator to the cells
Decreasing the temperature could work to slow down the reaction. All of these other choices
would either increase or maintain the rate of the reaction.
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43. A new antibiotic has been developed that inhibits the activity of an enzyme by
competitive inhibition. What effect will this have on the activation energy of the enzyme-
catalyzed reaction?
A. The activation energy required for the reaction in the presence of the antibiotic would be
greater than the activation energy required in the absence of the antibiotic
B. The activation energy required for the reaction in the presence of the antibiotic would be
less than the activation energy required in the absence of the antibiotic
C. The activation energy required for the reaction in the presence of the antibiotic will be the
same as the activation energy required in the absence of the antibiotic
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Clarify Question
Gather Content
What do you already know about enzymes and activation energy? What factors influence
activation energy? What other information is related to the question?
· Remember that the activity of an enzyme is directly related to its structure and
function. Recall that there are several structural elements of an enzyme that affect its function;
these include the active site, which can be regulated by competitive inhibitors.
· The question indicates that the antibiotic acts as a competitive inhibitor of the enzyme.
Considering the structure and function of enyzmes and how competitive inhibitors work, how
might the activation energy of the reaction be affected?
Choose Answer
Do you have all necessary information to analyze how the antibiotic might influence
activation energy?
· Recall that competitive inhibitors bind to the active site of the enzyme, which
precludes the substrate binding to the same location. Thus, it will take more substrate to out-
compete the competitive inhibitor, but with enough substrate this can be done and the enzyme
will achieve the same maximum rate eventually, with or without the competitive inhibitor.
· Regardless of how fast the enzyme can process the reaction (meaning with or without
the competitive inhibitor), the actual energy costs associated with the reaction do not change.
As a result, the competitive inhibitor antibiotic should have no effect on the activation energy
required for the enzyme-catalyzed reaction.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze the effect of a competitive inhibitor antibiotic on
the activation energy for an enzyme-catalyzed reaction.
· If you got the answer correct, good job! If you got an incorrect answer, did you
remember that competitive inhibitors bind to the active site? Did you recall how competitive
inhibitors affect overall reaction rate as substrate concentration changes? Were you able to
determine that activation energy, the actual cost of the reaction, doesn’t change regardless of
the presence or absence of a competitive inhibitor?
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44. A new antibiotic has been developed. It acts as a noncompetitive inhibitor. How will this
antibiotic affect delta G for the enzyme-catalyzed reaction?
A. Delta G will increase
B. Delta G will decrease
C. Delta G will be unaffected
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Clarify Question
Gather Content
What do you already know about enzymes and free energy? What other information is
related to the question?
· Remember that an enzyme helps to accelerate the rate of a reaction by making the
reaction more likely to occur. Recall that noncompetitive inhibitors bind not to the active site,
but to an enzyme’s secondary site which changes the protein’s three-dimensional
confirmation, changes the shape of the active site, and thereby reduces the overall speed of the
reaction.
· Considering the structure and function of enyzmes and how noncompetitive inhibitors
work, how might the free energy of the reaction be affected?
Choose Answer
Do you have all necessary information to analyze how the noncompetitive inhibitor might
influence free energy?
· Recall that noncompetitive inhibitors bind to a secondary site on the enzyme, which
changes the shape of the enzyme and precludes the substrate from binding to the active site.
Thus, no amount of substrate will allow the enzyme to reach its top speed because the shape
of the active site has been changed.
· Regardless of how fast the enzyme can process the reaction (meaning with or without
the noncompetitive inhibitor), the actual difference in free energy between the reactants and
the products will not change. Whether or not a reaction is exergonic or endergonic is a
function of whether or not the reaction has a positive or negative delta G. The presence of an
enzyme, or a noncompetitive inhibitor, has no effect on the difference in free energy. As a
result, the noncompetitive inhibitor antibiotic should have no effect on the free energy
required for the enzyme-catalyzed reaction.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze the effect of a noncompetitive inhibitor antibiotic
on the free energy for an enzyme-catalyzed reaction.
· If you got the answer correct, well done! If you got an incorrect answer, did you
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remember that noncompetitive inhibitors bind to a secondary site on an enzyme? Did you
recall how noncompetitive inhibitors affect overall reaction rate as substrate concentration
changes? Were you able to determine that free energy, or the difference in free energy from
reactants to products, doesn’t change regardless of the presence or absence of a
noncompetitive inhibitor?
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Chapter 06 - Energy and Metabolism
45. Glycolysis is a metabolic process that is done by all cells. However, not all cells make
use of another metabolic process called the Krebs cycle. What does this tell you about the
evolution of these processes?
A. As a metabolic process, glycolysis likely evolved prior to the Krebs cycle
B. As a metabolic process, the Krebs cycle likely evolved prior to glycolysis
C. Both the Krebs cycle and glycolysis likely evolved at the same time
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Clarify Question
Gather Content
What do you already know about evolution and time? What other information is related to
the question?
· Remember that evolution is a series of changes that occur over time. Evolution is
shaped by several factors, including natural selection that confers greater biological fitness for
a pre-existing genetic makeup within a given environment.
· Recall also that the greater numbers of species that share a trait, the older the trait or
the more important the trait may be. Given this context and considering that all organisms use
glycolysis but not all use the Kreb’s cycle, what conclusions can you draw?
Choose Answer
Do you have all necessary information to determine the relative importance of glycolysis
and the Kreb’s cycle?
· Glycolysis is used by all cells to metabolize energy. Since it is such a widely shared
trait across different life forms, it is because it is fundamentally important to survival and
because it has been around for a long time in evolutionary history; certainly longer than the
Kreb’s cycle, which is not used by all cells..
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to analyze the relative importance of glycolysis vs the Kreb’s
cycle in evolutionary history.
· If you got the answer correct, excellent! If you got an incorrect answer, did you
remember how evolution occurs? Were you able to infer how biologically relevant glycolysis
is based on its prevalence across life forms in nature? Were you able to compare its
importance to the Kreb’s cycle based on this information?
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46. Enzyme 1 converts substrate A into product B. Is this an example of a metabolic
pathway?
A. Yes. This is a metabolic pathway that includes feedback inhibition.
B. No. This only describes one chemical reaction. A metabolic pathway includes multiple
chemical reactions.
C. Yes. This is a simple metabolic pathway.
D. No. A metabolic pathway must include an inhibitory step.
47. It is summer, and you are excited about going to your local amusement park, and
specifically about riding the new roller coaster that was just built. You imagine waiting at the
top of the stairs for the roller coaster to pull into the station, climbing into the car, strapping
yourself into the seatbelt, and pulling down the harness. You can imagine the cars slowly
chugging up to the top of the first hill, coming down on the other side, and the excitement you
expect to feel as you go along for the ride. Of all of the things that you have imagined, which
is an example of potential energy?
A. Waiting at the top of the stairs for the roller coaster to pull into the station
B. Climbing into the car
C. Pulling down the harness
D. The roller coaster car going up the first hill
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Clarify Question
Gather Content
What do you already know about enzymes, feedback inhibition, and glycolysis? What
other information is related to the question?
· Remember that several enzymes can function together in a biochemical pathway, and
the efficient regulation of that pathway frequently involves feedback inhibition, which occurs
when the final product regulates an earlier step in the pathway.
· In glycolysis, PFK is a critical rate-setting enzyme that can be regulated to work faster
or slower, depending on environmental conditions. What molecules are likely to help increase
PFK activity when the cell needs more energy and decrease PFK activity when it needs less
energy via glycolysis?
Choose Answer
Do you have all the information needed to determine how AMP helps to regulate PFK
activity?
· Recall that biochemical pathways are a series of enzyme-regulated chemical reactions.
Control of a key enzyme in the pathway helps to regulate the entire pathway.
· In order to regulate a key enzyme like PFK, you need that enzyme to be able to sense
when there is too little or too much energy available. Carefully managing the cell’s resources
by tailoring energy metabolism is key to efficiency and survival.
· Consider that ATP is an important high-energy molecule used by the cell to power its
processes. If a cell has enough ATP, is it useful and efficient for that cell to make more when it
already has enough? When enough ATP is present, it will bind to PFK and down-regulate its
activity so that more ATP isn’t made until it is needed.
· Conversely, when energy levels are too low in the cell, you want to move molecules
through glycolysis in order to make more ATP. But how does the cell sense when energy
levels are low? It needs a sensory molecule, which in this case is AMP. AMP is a low-level
energy molecule, and acts as an effective sensor for PFK and glycolysis. So how does it
work? AMP can bind to an allosteric site on PFK, which activates PFK and increases the rate
of glycolysis, which results in greater ATP production.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
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Chapter 06 - Energy and Metabolism
49. You eat a bowl of beans as part of your dinner. As you digest the beans, the proteins that
are present get broken down to their component amino acids. As your body destroys the
macromolecules that were present in the beans, is the energy present in those molecules
destroyed?
A. Yes. By breaking down these macromolecules, some of the energy they contained is
destroyed.
B. No. While the vast majority of the energy contained in these macromolecules is converted
to heat, it is not actually destroyed.
C. No. The energy contained within these macromolecules is converted into other forms of
chemical energy and kinetic energy, though some is lost as heat.
D. No. Breaking down molecules does not lead to the release of energy.
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Chapter 06 - Energy and Metabolism
50. While standing at the top of the stairs, you have a potential energy of 40 Joules. If you
walk all the way down the stairs, what would your potential energy be at the bottom of the
stairs?
A. 0 Joules
B. 20 Joules
C. 40 Joules
D. 80 Joules
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Clarify Question
Gather Content
What do you already know about potential and kinetic energy? What other information is
related to the question?
· To solve this problem you’ll need to apply what you know about different states of
energy and use this to determine how much potential energy exists after walking down stairs
to the bottom.
· Remember that potential energy is stored energy and kinetic energy is from things in
motion. How are potential and kinetic energy related to each other?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of potential and kinetic energy. If you got an incorrect answer, did you remember that energy
has potential and kinetic forms? Did you remember that potential energy is stored energy, and
kinetic energy is energy of motion? Were you able to apply that understanding to determine
that walking to the bottom of stairs converted all your potential energy and so would have 0
Joules?
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51. If you were able to increase the kinetic energy of the molecules inside your body, how
would this affect your body temperature?
A. It would increase
B. It would decrease
C. It would remain the same
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Clarify Question
Gather Content
What do you already know about potential and kinetic energy? What other information is
related to the question?
· To solve this problem you’ll need to apply what you know about kinetic energy and
use this to infer what might happen to body temperature.
· Remember that kinetic energy is energy associated with things in motion. What effect
does temperature how on objects in motion?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of kinetic energy and relate it to temperature. If you got an incorrect answer, did you
remember that kinetic energy is energy associated with objects in motion? Did you remember
that objects in motion frequently generate friction, and friction generates heat? Were you able
to apply that understanding to predict that body temperature would increase as kinetic energy
increases?
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Chapter 06 - Energy and Metabolism
52. You return home to find that your baby brother has scattered his toy trains and trucks all
over the floor of your room. As you begin to pick up the toys and put them away, you realize
that even though he is just a baby, he has clearly mastered:
A. the first law of thermodynamics.
B. the second law of thermodynamics.
C. potential energy.
D. free energy.
53. If the DG of a reaction was -31.45 kJoules, you would know that:
A. the products have more free energy than the reactants.
B. the reaction requires an energy input of 31.45 kJoules to proceed.
C. the reaction most likely leads to development of a more ordered system.
D. the reaction is spontaneous.
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Clarify Question
Gather Content
What do you already know about evolution? What other information is related to the
question?
· Remember that evolution is a series of changes that occur over time. Evolution is
shaped by several factors, including natural selection that confers greater biological fitness for
a pre-existing genetic makeup within a given environment.
· A trait that evolved could convey greater biological fitness to some members of a
population as compared to others without that trait for a given environment. The same can be
said of molecules in a biochemical pathway. Inherited genetic changes that lead to molecular
variation which in turn affects pathway productivity could provide enhanced function for the
cells that contain them. That said, which steps in the biochemical pathway are most likely to
be foundational to function and evolved first?
Choose Answer
Do you have all necessary information to break down the biochemical pathway?
· There are 5 components in the biochemical pathway, starting with P and eventually
leading to T. Of these 5 components, which is most likely to have the key outcome and
function? That would most likely be product T, which is the function end product and most
likely to be used directly in cellular structure and/or function.
· Working backwards from there, the steps that are most directly connected to product T
represent the core chemistry in the pathway, which in this case is S -> T. All the other steps in
the pathway are essentially preparation to get to the functional end point of product T. Being
the most central to the pathway’s function, the S -> T reaction is likely to have evolved first.
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· This question asked you to determine which steps in a biochemical pathway are most
likely to have evolved first.
· If you got the answer correct, excellent! If you got an incorrect answer, did you
remember how evolution occurs? Were you able to break down the steps in a biochemical
pathway and determine which is most important? Were you able to infer the evolutionary
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55. While conducting an experiment, you realize that a competitive inhibitor was interfering
with your reaction. How could you overcome this problem?
A. Add a non-competitive inhibitor to the reaction.
B. Add a cofactor to the reaction.
C. Increase the concentration of the correct substrate in the reaction.
D. Add an allosteric activator to the reaction.
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Clarify Question
Gather Content
What do you already know about enzymes and competitive inhibition? What other
information is related to the question?
· To solve this problem you’ll need to apply what you know about how competitive
inhibition regulates enzyme function. Recall that enzyme function can be inhibited
competitively, noncompetitively, and allosterically. How does competitive inhibition compare
to the other types of inhibition, and keeping that mechanism in mind, what could you do to
overcome the inhibition?
Choose Answer
Reflect on Process
Did your problem-solving process lead you to the correct answer? If not, where did the
process break down or lead you astray? How can you revise your approach to produce a
more desirable result?
· Answering this question correctly depended on your ability to use your understanding
of enzymes and competitive inhibition to determine what would be the most likely solution to
restore your reaction.
· If you got an incorrect answer, did you recall how competitive inhibition works? Did
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you contrast that with noncompetitive and allosteric inhibition, which don’t involve the active
site and therefore wouldn’t solve the problem at all? Were you able to decipher that the best
solution was to simply outcompete the competitive inhibitor by increasing substrate?
56. A ribozyme catalyzes a reaction on itself and actually changes shape. This is an example
of.
A. intra-enzyme reactions.
B. inter-enzyme reactions.
C. intramolecular catalysis.
D. intermolecular catalysis.
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