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Series GSE218558 Query DataSets for GSE218558
Status Public on Nov 29, 2022
Title RNAseq of colorectal cancer organoids
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We tested transcript profile of colorectal cancer (CRC) organoid from CRC patients. We compared the transcripts profile change between drug resistant organoid and drug sensitive organoid.
 
Overall design We cultured CRC patients derived tumor organoid and divided the tumor organoids into two groups according to drug sensitivity.
 
Contributor(s) Zheng H, Liu j, Zhao Y, Hu G, Du L, Chen Q
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Submission date Nov 22, 2022
Last update date Nov 29, 2022
Contact name Hao Zheng
E-mail(s) zh13552856152@yeah.net
Organization name Nankai University
Department college of life science
Lab A201
Street address Nankai University
City Tianjin
ZIP/Postal code 300071
Country China
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (26)
GSM6752512 P1
GSM6752513 P4
GSM6752514 P5
Relations
BioProject PRJNA904315

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218558_gene_fpkm_matrix_DR_P1_vs_P1.csv.gz 1.4 Mb (ftp)(http) CSV
GSE218558_gene_tpm_matrix_8samples.csv.gz 1.0 Mb (ftp)(http) CSV
GSE218558_gene_tpm_matrix_DR_P7_vs_P7.csv.gz 1.3 Mb (ftp)(http) CSV
Raw data are available in SRA
Processed data are available on Series record

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