Foraging & Spatial ecology by Tracey Rogers

For effective species management, understanding population structure and distribution is critical... more For effective species management, understanding population structure and distribution is critical. However, quantifying population structure is not always straightforward. Within the Southern Hemisphere, the blue whale (Balaenoptera musculus) complex is extremely diverse but difficult to study. Using automated detector methods, we identified “acoustic populations” of whales producing region-specific call types. We examined blue whale call types in passive acoustic data at sites spanning over 7,370 km across the southeast Indian Ocean and southwest Pacific Ocean (SWPO) from 2009 to 2012. In the absence of genetic resolution, these acoustic populations offer unique information about the blue whale population complex. We found that the Australian continent acts as a geographic boundary, separating Australia and New Zealand blue whale acoustic populations at the junction of the Indian and Pacific Ocean basins. We located blue whales in previously undocumented locations, including the far SWPO, in the Tasman Sea off the east coast of Australia, and along the Lau Basin near Tonga. Our understanding of population dynamics across this broad scale has significant implications to recovery and conservation management for this endangered species, at a regional and global scale.

Polar Biology, 2003
Data on the timing of pupping by the three species of phocid that breed on the Antarctic pack-ice... more Data on the timing of pupping by the three species of phocid that breed on the Antarctic pack-ice (crabeater, Ross and leopard seals) are limited. Better information would improve our understanding of these species' population and reproductive ecologies, and could facilitate planning and design of population surveys. Observations of the presence or absence of pups with adults during numerous voyages of the Australian National Antarctic Research Expeditions to East Antarctica during spring and early summer months are analysed and presented. The earliest sighting in any year of a crabeater pup accompanied by an adult was on 2 October and the latest sighting on 15 December. The ratio of crabeater pups to adults increased rapidly during the 10-day period 16–25 October, implying a pulse of births over this time. Ross seal pups with an accompanying adult were sighted between 24 October and 22 November, with a peak in the pup-adult ratio occurring in the period 6–15 November. Leopard seal pups were sighted between 8 November and 25 December, with the pup-adult ratio relatively constant during this period. The data provide circumstantial evidence that the maximum durations of lactation reported in the literature for the three species may be over-estimates. If lactation is shorter than reported, asynchrony in the timing of pupping, either among or within years, is implied.

Biological Conservation, 2012
The compound effects of changing habitats, ecosystem interactions, and fishing practices have imp... more The compound effects of changing habitats, ecosystem interactions, and fishing practices have implications for the management of Antarctic krill and conservation of its predators. For Antarctic pack-ice seals, an important group of krill predators, we estimate the density and krill consumption in the West Antarctic Peninsula (WAP)-Western Weddell Sea area, the main fishery region; and we consider long-term changes in suitable pack-ice habitat, increased fishing pressure and potential krill declines based upon predictions from declines in sea ice cover. More than 3 million crabeater seals consumed over 12 million tonnes of krill each year. This was approximately 17% of the krill standing stock. The highest densities of pack ice seals where found in the WAP, including in its small-scale fishery management areas, where apparently suitable seal habitat has declined by 21-28% over a 30 year period, where krill density is likely to have declined, and fishing has increased. The highest seal density was found in the Marguerite Bay area which is a source of krill for the Antarctic Peninsula and elsewhere. Significant sea-ice loss since 1979 has already occurred, leading to open water and possible expansion for the fishery in the future. These factors may combine to potentially reduce food for pack ice seals. Therefore, high uncertainty in krill and seal stock trends and in their environmental drivers call for a precautionary management of the krill fishery, in the absence of survey data to support management based on specific conservation objectives for pack-ice seals.

The method traditionally used to estimate pack-ice seal abundance employs sighting surveys from s... more The method traditionally used to estimate pack-ice seal abundance employs sighting surveys from ships or aircraft to estimate the number of seals hauled out on the ice, combined with studies of haul-out behaviour to estimate the proportion of time spent on the ice. Application of this approach has been improved in recent times by developments in survey methodology and satellite technology that theoretically allow biases in the estimation of hauled-out abundance and haulout behaviour to be accounted for that previously could not be addressed. A survey using these conventional but state-ofthe-art methods was undertaken in the summer of 1999/2000 off east Antarctica between longitudes 641E and 1501E to estimate the abundance of leopard (Hydrurga leptonyx) and other pack-ice seal species. Because they are either uncommon or very cryptic, very few leopard seals were encountered despite a large survey effort. This presented challenges in both application of the methods and analysis of the data. Abundance estimates were derived using a number of plausible predictive models. The model considered as the most reliable returned best estimates of 7300 and 12,100 for definite and definite plus probable leopard seal sightings, respectively, with 95% confidence intervals of 3700-14,500 and 7100-23,400. These estimates are likely to be negatively biased and should be treated as minimum estimates only. r

Mixing models are used to determine diets where the number of prey items are greater than one, ho... more Mixing models are used to determine diets where the number of prey items are greater than one, however, the limitation of the linear mixing method is the lack of a unique solution when the number of potential sources is greater than the number (n) of isotopic signatures +1. Using the IsoSource program all possible combinations of each source contribution (0-100%) in preselected small increments can be examined and a range of values produced for each sample analysed. We propose the use of a Moore Penrose (M-P) pseudoinverse, which involves the inverse of a 2x2 matrix. This is easily generalized to the case of a single isotope with (p) prey sources and produces a specific solution. The Antarctic leopard seal (Hydrurga leptonyx) was used as a model species to test this method. This seal is an opportunistic predator, which preys on a wide range of species including seals, penguins, fish and krill. The M-P method was used to determine the contribution to diet from each of the four prey types based on blood and fur samples collected over three consecutive austral summers. The advantage of the M-P method was the production of a vector of fractions f for each predator isotopic value, allowing us to identify the relative variation in dietary proportions. Comparison of the calculated fractions from this method with 'means' from IsoSource allowed confidence in the new approach for the case of a single isotope, N.

Marine Ecology-progress Series, 2005
In order to assess seasonal and spatial changes in diet, the δ15N and δ13C signatures of vibrissa... more In order to assess seasonal and spatial changes in diet, the δ15N and δ13C signatures of vibrissae from leopard seals Hydrurga leptonyx obtained from Prydz Bay, Eastern Antarctica, were compared with those of a captive seal on a known diet. Using the isotopic signatures of known prey, and those revealed by the assimilation rates of vibrissae, we constructed trophic models to estimate diet composition. Assuming that current diet was reflected only in the actively growing portion of the vibrissae, the latter were sectioned. Each section was then analysed independently. Two methods of analysis of the vibrissae isotopic data were compared in order to ascertain the best analytical approach to these data. A simple linear model and a von Bertalanffy growth model were used to estimate section age and vibrissae growth rates. The age predictions of the von Bertalanffy growth model allowed the existence of repeated seasonal oscillations in both δ15N and δ13C values. Temporal variations in stable isotope ratios consistent with changes in source of feeding (inshore vs. offshore) and prey types were identified in the Antarctic leopard seals, but not in the captive seal. This preliminary study has possible implications for the use of vibrissae to track dietary changes over time and may serve as a tool for investigating foraging preferences of highly mobile or migratory pinniped species.

Proceedings. Biological sciences / The Royal Society, Jan 22, 2014
Predator-prey relationships and trophic levels are indicators of community structure, and are imp... more Predator-prey relationships and trophic levels are indicators of community structure, and are important for monitoring ecosystem changes. Mammals colonized the marine environment on seven separate occasions, which resulted in differences in species' physiology, morphology and behaviour. It is likely that these changes have had a major effect upon predator-prey relationships and trophic position; however, the effect of environment is yet to be clarified. We compiled a dataset, based on the literature, to explore the relationship between body mass, trophic level and predator-prey ratio across terrestrial (n = 51) and marine (n = 56) mammals. We did not find the expected positive relationship between trophic level and body mass, but we did find that marine carnivores sit 1.3 trophic levels higher than terrestrial carnivores. Also, marine mammals are largely carnivorous and have significantly larger predator-prey ratios compared with their terrestrial counterparts. We propose that p...

PLoS ONE, 2014
Predator-prey body mass relationships are a vital part of food webs across ecosystems and provide... more Predator-prey body mass relationships are a vital part of food webs across ecosystems and provide key information for predicting the susceptibility of carnivore populations to extinction. Despite this, there has been limited research on the minimum and maximum prey size of mammalian carnivores. Without information on large-scale patterns of prey mass, we limit our understanding of predation pressure, trophic cascades and susceptibility of carnivores to decreasing prey populations. The majority of studies that examine predator-prey body mass relationships focus on either a single or a subset of mammalian species, which limits the strength of our models as well as their broader application. We examine the relationship between predator body mass and the minimum, maximum and range of their prey's body mass across 108 mammalian carnivores, from weasels to baleen whales (Carnivora and Cetacea). We test whether mammals show a positive relationship between prey and predator body mass, as in reptiles and birds, as well as examine how environment (aquatic and terrestrial) and phylogenetic relatedness play a role in this relationship. We found that phylogenetic relatedness is a strong driver of predator-prey mass patterns in carnivorous mammals and accounts for a higher proportion of variance compared with the biological drivers of body mass and environment. We show a positive predator-prey body mass pattern for terrestrial mammals as found in reptiles and birds, but no relationship for aquatic mammals. Our results will benefit our understanding of trophic interactions, the susceptibility of carnivores to population declines and the role of carnivores within ecosystems.
The behaviour of leopard seals, Hydrurga leptonyx, feeding on Adélie penguins, Pygoscelis adeliae... more The behaviour of leopard seals, Hydrurga leptonyx, feeding on Adélie penguins, Pygoscelis adeliae, was investigated between November 1993 and January 1994 in Prydz Bay, Antarctica. The seals were distributed along the fast-ice edge in locations where departing penguins congregated. Five different hunting techniques were observed, four of which were used through most of the summer. Individual leopard seals favoured specific hunting techniques. Hitherto, penguin hunting was believed to be carried out primarily by a few male seals; in this study, however, the predation observed involved many different individuals of both sexes. It is estimated that six leopard seals feeding in this area over a period of 120 days would consume 2.7% of the adult penguin population.

Data on the timing of pupping by the three species of phocid that breed on the Antarctic pack-ice... more Data on the timing of pupping by the three species of phocid that breed on the Antarctic pack-ice (crabeater, Ross and leopard seals) are limited. Better information would improve our understanding of these species' population and reproductive ecologies, and could facilitate planning and design of population surveys. Observations of the presence or absence of pups with adults during numerous voyages of the Australian National Antarctic Research Expeditions to East Antarctica during spring and early summer months are analysed and presented. The earliest sighting in any year of a crabeater pup accompanied by an adult was on 2 October and the latest sighting on 15 December. The ratio of crabeater pups to adults increased rapidly during the 10-day period 16-25 October, implying a pulse of births over this time. Ross seal pups with an accompanying adult were sighted between 24 October and 22 November, with a peak in the pup-adult ratio occurring in the period 6-15 November. Leopard seal pups were sighted between 8 November and 25 December, with the pup-adult ratio relatively constant during this period. The data provide circumstantial evidence that the maximum durations of lactation reported in the literature for the three species may be over-estimates. If lactation is shorter than reported, asynchrony in the timing of pupping, either among or within years, is implied.
Global Ecology and Biogeography, 2014
Aim Mammalian home range patterns provide information on spatial behaviour and ecological pattern... more Aim Mammalian home range patterns provide information on spatial behaviour and ecological patterns, such as resource use, that is often used by conservation managers in a variety of contexts. However, there has been little research on home range patterns outside of the terrestrial environment, potentially limiting the relevance of current home range models for marine mammals, a group of particular conservation concern. To address this gap, we investigated how variation in mammalian home range size among marine and terrestrial species was related to diet, environment and body mass.

Polar Biology, 2005
This is the first study that has used satellite telemetry to assess the spatial behaviour of adul... more This is the first study that has used satellite telemetry to assess the spatial behaviour of adult leopard seals. Satellite tags on 11 leopard seals transmitted between 29 days and 282 days. Swim speeds, distances swum per day and distances from tagging site were significantly different among individuals and seasons. Swim speeds ranged from 0.004 km/h to 10.86 km/h; distances swum per day from 0 km/day to 150 km/day; and the maximum distances from tagging site ranged from 33.30 km to 319.97 km. Rather than moving northsouth with the ice most seals remained within a 50 km radius of their tagging site from 11 days to 97 days. The relatively sedentary movement of the leopard seals was unexpected, particularly the movement of animals over winter, which although slightly offshore did not reflect the usual northward winter migration described for the leopard seal. But traditionally, the leopard seals' spatial habits have been described from sightings of animals at higher latitudes. These are generally younger animals and their behaviour may not be representative of the adults. This study has focused on adult females and animals at the extreme southerly range of the leopard seal. This highlights the importance of understanding and reporting age structure and distribution when discussing animal spatial behaviour.

PloS one, 2014
Thylacinidae is an extinct family of Australian and New Guinean marsupial carnivores, comprizing ... more Thylacinidae is an extinct family of Australian and New Guinean marsupial carnivores, comprizing 12 known species, the oldest of which are late Oligocene (∼24 Ma) in age. Except for the recently extinct thylacine (Thylacinus cynocephalus), most are known from fragmentary craniodental material only, limiting the scope of biomechanical and ecological studies. However, a particularly well-preserved skull of the fossil species Nimbacinus dicksoni, has been recovered from middle Miocene (∼16-11.6 Ma) deposits in the Riversleigh World Heritage Area, northwestern Queensland. Here, we ask whether N. dicksoni was more similar to its recently extinct relative or to several large living marsupials in a key aspect of feeding ecology, i.e., was N. dicksoni a relatively small or large prey specialist. To address this question we have digitally reconstructed its skull and applied three-dimensional Finite Element Analysis to compare its mechanical performance with that of three extant marsupial carnivores and T. cynocephalus. Under loadings adjusted for differences in size that simulated forces generated by both jaw closing musculature and struggling prey, we found that stress distributions and magnitudes in the skull of N. dicksoni were more similar to those of the living spotted-tailed quoll (Dasyurus maculatus) than to its recently extinct relative. Considering the Finite Element Analysis results and dental morphology, we predict that N. dicksoni likely occupied a broadly similar ecological niche to that of D. maculatus, and was likely capable of hunting vertebrate prey that may have exceeded its own body mass.

Extinction risk varies across species and is influenced by key ecological parameters, such as die... more Extinction risk varies across species and is influenced by key ecological parameters, such as diet specialization. For predictive conservation science to be effective, we need to understand extinction risk factors that may have implicated recent species extinctions. Diet and feeding behaviour of the large extinct marsupial carnivore Thylacinus cynocephalus or thylacine have long been debated. Improved understanding of the skull's biomechanical performance and its limitations in a comparative context may yield important insights. Here, we use three-dimensional (3D) finite element analysis to assess aspects of biomechanical performance in the skull of T. cynocephalus relative to those of two extant marsupial carnivores with known diets that occurred sympatrically with T. cynocephalus: the Tasmanian devil, Sarcophilus harrisii, and spotted-tailed quoll, Dasyurus maculatus. Together, these three species comprised the large mammalian carnivore guild in Tasmania at the time of European settlement. The bone-cracking S. harrisii produced high bite forces for its size as expected, but the stresses induced were surprisingly high. A higher proportion of cancellous bone in the skull of this osteophage may act to absorb shock but decrease rigidity and hence raise stress. A relatively high bite force and rigid skull characterized D. maculatus, which may allow them to target prey of variable sizes. Compared with S. harrisii and D. maculatus, we found that the skull of T. cynocephalus was least well adapted to withstand forces driven solely by its jaw-closing musculature, as well as to simulations of struggling prey. Our findings suggest that T. cynocephalus likely consumed smaller prey relative to its size, which may have had implications for their survival.

The leopard seal is a top-order predator in the Southern Ocean ecosystem and preys on a wide vari... more The leopard seal is a top-order predator in the Southern Ocean ecosystem and preys on a wide variety of vertebrate species including seals and penguins. We assessed the use of hairs found in leopard seal scats to identify the species of pinniped consumed. A reference collection of hairs was obtained from four potential leopard seal prey species including crabeater, Weddell, Ross, and Southern elephant seals. Discrimination techniques applied to terrestrial mammals did not allow for identification of the seal hairs. Instead, a 2-dimensional (2-D) and 6-dimensional (6-D) analysis technique utilising Mahalanobis distances (D 2) was used. The smallest Mahalanobis distance together with the largest value of p(F) positively identified hairs from each species. The 6-D analysis was more accurate and applied to hairs found in the leopard seal scats. The majority of prey species were identified as crabeater seals, which are a known prey item of the leopard seal.
The passage rate of food through the alimentary tract of three captive, female leopard seals (Hyd... more The passage rate of food through the alimentary tract of three captive, female leopard seals (Hydrurga leptonyx) was assessed. Seals were housed during winter in holding pools with access to water to reduce factors affecting digestion. Three different marker types were used; large and small beads and TiO 2 . Animals were checked hourly, and sample collections continued for 270 h after dosing. Individual differences in transit and mean retention times were observed, possibly reflecting inter-digestive emptying times of the stomach and small intestine. Age differences and activity levels may also have been a factor. Leopard seals displayed extended food transit times similar to terrestrial carnivores instead of other pinnipeds. This result suggests an adaptation of digestive system to cope with the opportunistic diet and range of prey types consumed.
Too close for comfort, 2008
Wildlife Research, 2014
Context. Three dolphin species occur in coastal waters of monsoonal northern Australia: the Austr... more Context. Three dolphin species occur in coastal waters of monsoonal northern Australia: the Australian snubfin (Orcaella heinsohni), humpback (Sousa sp.) and the bottlenose (Tursiops sp.). Their overall population size and trends are poorly known, and their conservation status has been difficult to resolve, but can be expected to deteriorate with likely increased development pressures.
Too close for comfort, 2008
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Foraging & Spatial ecology by Tracey Rogers
leopard seal. Three frequencies from 1 to 4 kHz were tested at sound levels from 68 to 122 dB peak
equivalent sound pressure level (peSPL). Results illustrate brainstem activity within the 1–4 kHz
range, with better hearing sensitivity at 4 kHz. As is seen in human ABR, only wave V is reliably
identified at the lower stimulus intensities. Wave V is present down to levels of 82 dB peSPL in the
right ear and 92 dB peSPL in the left ear at 4 kHz. Further investigations testing a wider frequency
range on seals of various sex and age classes are required to conclusively report on the hearing range
and sensitivity in this species.