Papers by Naimah Mohd Hussin
2012 International Conference on Computer & Information Science (ICCIS), 2012
ABSTRACT This paper presents a Linear-Particle Swarm Optimization (PSO) algorithm for discovering... more ABSTRACT This paper presents a Linear-Particle Swarm Optimization (PSO) algorithm for discovering motifs in DNA sequences, and the strengths and weaknesses of using the Linear-PSO for discovering motifs of DNA sequences will be discussed. For the experiment, ten DNA sequences from an online database were used as an input for the algorithms. Linear-PSO uses a reference set for population initialization and new position calculation. Existing PSO algorithms generate random numbers to initialize population and velocity calculation. Random-PSO reduces the accuracy of the algorithm when applied to the detection of motifs for specific species. The results show that Linear-PSO consistently discovered the same motif in each execution with higher fitness values. Even though Linear-PSO detects motifs accurately, the speed of motif discovery is slow and this requires further study.
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School of Computer Science and Information …
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Second International Conference …, Jan 1, 2010
... Mohd Azri Abdul Aziz Faculty of Electrical Engineering Universiti Teknologi MARA Shah Alam, S... more ... Mohd Azri Abdul Aziz Faculty of Electrical Engineering Universiti Teknologi MARA Shah Alam, Selangor, Malaysia azriaziz@salam.uitm.edu.my ... Allahverdi and Al-Anzi [12] proposed PSO algorithm to solve flowshop scheduling problems. ...
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Lecture Notes in Computer …, Jan 1, 2005
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Science and Social …
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Information Retrieval & Knowledge …
... Jaya, Malaysia arhafizah@kdu.edu.my Zaidah Ibrahim Faculty of Computer and Mathematical Scien... more ... Jaya, Malaysia arhafizah@kdu.edu.my Zaidah Ibrahim Faculty of Computer and Mathematical Sciences Universiti Teknologi MARA Shah Alam, Malaysia zaidah@tmsk.uitm.edu.my Naimah Mohd Hussin Faculty of Computer ...
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Papers by Naimah Mohd Hussin