[go: up one dir, main page]

Guzzi et al., 2011 - Google Patents

Automatic summarisation and annotation of microarray data

Guzzi et al., 2011

View PDF
Document ID
7402709019291874980
Author
Guzzi P
Di Martino M
Tradigo G
Veltri P
Tassone P
Tagliaferri P
Cannataro M
Publication year
Publication venue
Soft Computing

External Links

Snippet

The study of biological processes within cells is based on the measurement of the activity of different molecules, in particular genes and proteins whose activities are strictly related. The activity of genes is measured through a systematic investigation carried out by microarrays …
Continue reading at www.researchgate.net (PDF) (other versions)

Classifications

    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/30Medical informatics, i.e. computer-based analysis or dissemination of patient or disease data
    • G06F19/32Medical data management, e.g. systems or protocols for archival or communication of medical images, computerised patient records or computerised general medical references
    • G06F19/322Management of patient personal data, e.g. patient records, conversion of records or privacy aspects
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
    • G06F19/28Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for programming tools or database systems, e.g. ontologies, heterogeneous data integration, data warehousing or computing architectures
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/30Medical informatics, i.e. computer-based analysis or dissemination of patient or disease data
    • G06F19/34Computer-assisted medical diagnosis or treatment, e.g. computerised prescription or delivery of medication or diets, computerised local control of medical devices, medical expert systems or telemedicine
    • G06F19/345Medical expert systems, neural networks or other automated diagnosis
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
    • G06F19/20Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for hybridisation or gene expression, e.g. microarrays, sequencing by hybridisation, normalisation, profiling, noise correction models, expression ratio estimation, probe design or probe optimisation
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
    • G06F19/24Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for machine learning, data mining or biostatistics, e.g. pattern finding, knowledge discovery, rule extraction, correlation, clustering or classification
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
    • G06F19/18Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for functional genomics or proteomics, e.g. genotype-phenotype associations, linkage disequilibrium, population genetics, binding site identification, mutagenesis, genotyping or genome annotation, protein-protein interactions or protein-nucleic acid interactions
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/30Medical informatics, i.e. computer-based analysis or dissemination of patient or disease data
    • G06F19/36Computer-assisted acquisition of medical data, e.g. computerised clinical trials or questionnaires
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F17/00Digital computing or data processing equipment or methods, specially adapted for specific functions
    • G06F17/30Information retrieval; Database structures therefor; File system structures therefor
    • G06F17/30286Information retrieval; Database structures therefor; File system structures therefor in structured data stores
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06QDATA PROCESSING SYSTEMS OR METHODS, SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL, SUPERVISORY OR FORECASTING PURPOSES; SYSTEMS OR METHODS SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL, SUPERVISORY OR FORECASTING PURPOSES, NOT OTHERWISE PROVIDED FOR
    • G06Q50/00Systems or methods specially adapted for a specific business sector, e.g. utilities or tourism
    • G06Q50/10Services
    • G06Q50/22Health care, e.g. hospitals; Social work
    • G06Q50/24Patient record management
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by the preceding groups
    • G01N33/48Investigating or analysing materials by specific methods not covered by the preceding groups biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F9/00Arrangements for programme control, e.g. control unit
    • G06F9/06Arrangements for programme control, e.g. control unit using stored programme, i.e. using internal store of processing equipment to receive and retain programme
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F8/00Arrangements for software engineering
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06QDATA PROCESSING SYSTEMS OR METHODS, SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL, SUPERVISORY OR FORECASTING PURPOSES; SYSTEMS OR METHODS SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL, SUPERVISORY OR FORECASTING PURPOSES, NOT OTHERWISE PROVIDED FOR
    • G06Q10/00Administration; Management

Similar Documents

Publication Publication Date Title
Long et al. Deciphering spatial domains from spatial multi-omics with SpatialGlue
Quintelier et al. Analyzing high-dimensional cytometry data using FlowSOM
HuBMAP Consortium mpsnyder@ stanford. edu Writing Group Snyder Michael P. mpsnyder@ stanford. edu 1 b Lin Shin shinlin@ uw. edu 2 c Posgai Amanda aposgai6@ ufl. edu 3 d Atkinson Mark atkinson@ pathology. ufl. edu 3 e Regev Aviv 4 5 Rood Jennifer 4 Rozenblatt-Rosen Orit 4 Gaffney Leslie 4 Hupalowska Anna 4 Satija Rahul rsatija@ nygenome. org 6 7 m Gehlenborg Nils nils@ hms. harvard. edu 8 n Shendure Jay 9 Laskin Julia jlaskin@ purdue. edu 10 q Harbury Pehr harbury@ stanford. edu 11 r Nystrom Nicholas A. nystrom@ psc. edu 12 s Silverstein Jonathan C. jcs@ pitt. edu 13 t Bar-Joseph Ziv zivbj@ cs. cmu. edu 14 u Zhang Kun kzhang@ bioeng. ucsd. edu 15 v Börner Katy katy@ indiana. edu 16 w Lin Yiing 17 Conroy Richard conroyri@ mail. nih. gov 18 y Procaccini Dena 18 Roy Ananda L. 18 Pillai Ajay 19 Brown Marishka 20 Galis Zorina S. 20 et al. The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
Greenwood et al. The AD knowledge portal: a repository for multi‐omic data on Alzheimer's disease and aging
Mahi et al. GREIN: an interactive web platform for re-analyzing GEO RNA-seq data
Tyanova et al. Perseus: a bioinformatics platform for integrative analysis of proteomics data in cancer research
Bonetta Interactome under construction
Guo et al. SeqMule: automated pipeline for analysis of human exome/genome sequencing data
US10600503B2 (en) Systems medicine platform for personalized oncology
Coletta et al. InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor
JP2011520206A (en) Medical analysis system
Reska et al. Integration of solutions and services for multi-omics data analysis towards personalized medicine
Paverd et al. Radiology and multi-scale data integration for precision oncology
Borchert et al. Knowledge bases and software support for variant interpretation in precision oncology
US20040236723A1 (en) Method and system for data evaluation, corresponding computer program product, and corresponding computer-readable storage medium
Ahmed et al. Advancing clinical genomics and precision medicine with GVViZ: FAIR bioinformatics platform for variable gene-disease annotation, visualization, and expression analysis
Wang et al. NCI cancer research data commons: resources to share key cancer data
Link et al. Longitudinal deep neural networks for assessing metastatic brain cancer on a large open benchmark
Heinzel et al. Functional molecular units for guiding biomarker panel design
Feng et al. An accurate regression of developmental stages for breast cancer based on transcriptomic biomarkers
Guzzi et al. Automatic summarisation and annotation of microarray data
Weniger et al. Genome expression pathway analysis tool–analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context
Bensz et al. Integrated system supporting research on environment related cancers
Shooshtari et al. Developing OCHROdb, a comprehensive quality checked database of open chromatin regions from sequencing data
Wegener et al. Towards an environment for data mining based analysis processes in bioinformatics and personalized medicine