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Kredens et al., 2020 - Google Patents

Vertical lossless genomic data compression tools for assembled genomes: A systematic literature review

Kredens et al., 2020

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Document ID
13078383596236477913
Author
Kredens K
Martins J
Dordal O
Ferrandin M
Herai R
Scalabrin E
Avila B
Publication year
Publication venue
Plos one

External Links

Snippet

The recent decrease in cost and time to sequence and assemble of complete genomes created an increased demand for data storage. As a consequence, several strategies for assembled biological data compression were created. Vertical compression tools implement …
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Classifications

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    • G06F17/30286—Information retrieval; Database structures therefor; File system structures therefor in structured data stores
    • G06F17/30312—Storage and indexing structures; Management thereof
    • G06F17/30321—Indexing structures
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
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    • G06F19/00—Digital computing or data processing equipment or methods, specially adapted for specific applications
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    • G06F19/22—Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for sequence comparison involving nucleotides or amino acids, e.g. homology search, motif or SNP [Single-Nucleotide Polymorphism] discovery or sequence alignment
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