WO2023011359A1 - 桥环类化合物及其应用 - Google Patents
桥环类化合物及其应用 Download PDFInfo
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- WO2023011359A1 WO2023011359A1 PCT/CN2022/109073 CN2022109073W WO2023011359A1 WO 2023011359 A1 WO2023011359 A1 WO 2023011359A1 CN 2022109073 W CN2022109073 W CN 2022109073W WO 2023011359 A1 WO2023011359 A1 WO 2023011359A1
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- pharmaceutically acceptable
- acceptable salt
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/41—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
- A61K31/4164—1,3-Diazoles
- A61K31/4188—1,3-Diazoles condensed with other heterocyclic ring systems, e.g. biotin, sorbinil
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
- A61K31/46—8-Azabicyclo [3.2.1] octane; Derivatives thereof, e.g. atropine, cocaine
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
- A61P1/04—Drugs for disorders of the alimentary tract or the digestive system for ulcers, gastritis or reflux esophagitis, e.g. antacids, inhibitors of acid secretion, mucosal protectants
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D451/00—Heterocyclic compounds containing 8-azabicyclo [3.2.1] octane, 9-azabicyclo [3.3.1] nonane, or 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring systems, e.g. tropane or granatane alkaloids, scopolamine; Cyclic acetals thereof
- C07D451/02—Heterocyclic compounds containing 8-azabicyclo [3.2.1] octane, 9-azabicyclo [3.3.1] nonane, or 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring systems, e.g. tropane or granatane alkaloids, scopolamine; Cyclic acetals thereof containing not further condensed 8-azabicyclo [3.2.1] octane or 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring systems, e.g. tropane; Cyclic acetals thereof
- C07D451/04—Heterocyclic compounds containing 8-azabicyclo [3.2.1] octane, 9-azabicyclo [3.3.1] nonane, or 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring systems, e.g. tropane or granatane alkaloids, scopolamine; Cyclic acetals thereof containing not further condensed 8-azabicyclo [3.2.1] octane or 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring systems, e.g. tropane; Cyclic acetals thereof with hetero atoms directly attached in position 3 of the 8-azabicyclo [3.2.1] octane or in position 7 of the 3-oxa-9-azatricyclo [3.3.1.0<2,4>] nonane ring system
Definitions
- the invention relates to a bridged ring compound and its application in the preparation of medicines for treating related diseases. It specifically relates to the compound represented by formula (I) and its pharmaceutically acceptable salt.
- IBD Inflammatory bowel disease
- CD Crohn's disease
- UC ulcerative colitis
- Common symptoms include diarrhea, bloody stools, and abdominal pain.
- the clinical course proceeds in intermittent, alternating cycles of exacerbations and remissions, and patients with ulcerative colitis are at increased risk of developing colorectal cancer (Dennis et al. N Engl J Med, 2011, 365, 1713-1725).
- Excessive inflammatory responses in the gastrointestinal tract are mediated by inflammatory cytokines such as TNF ⁇ , IFN- ⁇ , IL-1, IL-6, IL-12, IL-21, and IL-23, and are Cells of the adaptive immune system play a role, including T and B lymphocytes, epithelial cells, macrophages and dendritic cells (Neurath, M.F. Nat. Rev. Immunol. 2014, 14, 329).
- the Janus kinase (JAK) family: JAK1, JAK2, JAK3 and Tyk2 are non-receptor tyrosine kinases that play a key role in the transduction response of many of the above-mentioned cytokines.
- cytokines Upon ligation of cytokines to receptors, associated JAK homo- or heterodimers are phosphorylated and activated, resulting in subsequent recruitment, phosphorylation, and activation of signal transducers and activators of transcription (STAT) family transcription factors .
- STAT signal transducers and activators of transcription
- pSTATs Phosphorylated STATs translocate to the nucleus and induce gene transcription of several chemokines, cytokines, and proteases associated with IBD pathogenesis.
- AEs adverse events
- Common systemic adverse events (AEs) in phase 2 and phase 3 clinical trials of tovacitinib in IBD include decreased hemoglobin, decreased absolute neutrophil count (ANC), increased total cholesterol (low-density and high-density lipids), and Infection (Sandborn, W.J. et al., N. Engl. J.
- JAK1-selective inhibitors such as filgotinib and upadacitinib
- filgotinib and upadacitinib are currently being used in phase 3 clinical trials in CD and UC.
- upadacitinib dose 15 mg twice daily for rheumatoid arthritis also has a boxed warning from the FDA about the risk of thrombosis (Upadacitinib Instructions).
- Another approach is to maximize gut tissue exposure of JAK inhibitors while avoiding possible systemic exposure.
- JAK inhibitors may have adverse systemic immunosuppressive effects due to the modulatory effects of the JAK/STAT pathway on the immune system. There is thus a need to provide new JAK inhibitors that have their effects at the focal site without significant systemic effects. Specifically, it has advantages in the treatment of gastrointestinal inflammatory diseases, such as UC and CD.
- the present invention provides a compound of formula (I) or a pharmaceutically acceptable salt thereof,
- R 1 is R 11 ,
- D 1 is O or CH 2 ;
- T1 is N or CH
- R 11 is H, CN or C 1-3 alkyl, wherein said C 1-3 alkyl is optionally substituted by 1, 2 or 3 R a ;
- R 2 is H or C 1-3 alkyl, wherein said C 1-3 alkyl is optionally substituted by 1, 2 or 3 R b ;
- R 4 is H or C 1-3 alkyl
- E 1 and E 2 are independently O or NH;
- E 3 is CH 2 or O
- R 31 , R 32 and R 34 are independently C 1-3 alkyl
- R 33 is H or C 1-3 alkyl
- q 1 or 2;
- n 0, 1 or 2;
- n 0, 1 or 2;
- r 0, 1 or 2;
- R a and R b are each independently F, Cl, Br, I, OH, CN or NH 2 .
- R 11 is H, CN or CH 3 , wherein the CH 3 is optionally substituted by 1, 2 or 3 R a , and other variables are as defined in the present invention.
- R 11 is H, CN or CF 3 , and other variables are as defined in the present invention.
- R 1 is H, CN, CF 3 , Other variables are as defined herein.
- R 2 is H or which stated Optionally substituted with 1, 2 or 3 R b , other variables are as defined herein.
- R 2 is H, -CH 2 CH 3 or Other variables are as defined herein.
- R 31 , R 32 and R 34 are each independently CH 3 or -CH 2 CH 3 , and other variables are as defined in the present invention.
- R 33 is H or CH 3 , and other variables are as defined in the present invention.
- R 4 is H, CH 3 , CH 2 CH 3 or CH 2 CH 2 CH 3 , and other variables are as defined in the present invention.
- L 1 , R 1 , R 2 , R 31 , R 32 , R 34 and R 4 are as defined in the present invention.
- the present invention also provides a compound of the following formula or a pharmaceutically acceptable salt thereof,
- the present invention provides the application of the above-mentioned compound or a pharmaceutically acceptable salt thereof in the preparation of a medicament for treating intestinal pan-JAK-related diseases.
- the above-mentioned intestinal pan-JAK-related disease is inflammatory bowel disease.
- the compound of the present invention exhibits good inhibitory properties in the in vitro activity test of the four subtypes of kinases JAK1, JAK2, JAK3 and TYK2.
- pharmaceutically acceptable refers to those compounds, materials, compositions and/or dosage forms, which are suitable for use in contact with human and animal tissues within the scope of sound medical judgment , without undue toxicity, irritation, allergic reaction or other problems or complications, commensurate with a reasonable benefit/risk ratio.
- pharmaceutically acceptable salt refers to a salt of a compound of the present invention, which is prepared from a compound having a specific substituent found in the present invention and a relatively non-toxic acid or base.
- base addition salts can be obtained by contacting such compounds with a sufficient amount of base, either neat solution or in a suitable inert solvent.
- Pharmaceutically acceptable base addition salts include sodium, potassium, calcium, ammonium, organic amine or magnesium salts or similar salts.
- acid addition salts can be obtained by contacting such compounds with a sufficient amount of the acid, either neat solution or in a suitable inert solvent.
- Certain specific compounds of the present invention contain basic and acidic functional groups and can thus be converted into either base or acid addition salts.
- the pharmaceutically acceptable salts of the present invention can be synthesized from the parent compound containing acid groups or bases by conventional chemical methods.
- such salts are prepared by reacting the free acid or base form of these compounds with a stoichiometric amount of the appropriate base or acid in water or an organic solvent or a mixture of both.
- the compounds of the invention may exist in particular geometric or stereoisomeric forms.
- the present invention contemplates all such compounds, including cis and trans isomers, (-)- and (+)-enantiomers, (R)- and (S)-enantiomers, diastereomers isomers, (D)-isomers, (L)-isomers, and their racemic and other mixtures, such as enantiomerically or diastereomerically enriched mixtures, all of which are subject to the present within the scope of the invention.
- Additional asymmetric carbon atoms may be present in substituents such as alkyl groups. All such isomers, as well as mixtures thereof, are included within the scope of the present invention.
- enantiomer or “optical isomer” refer to stereoisomers that are mirror images of each other.
- cis-trans isomers or “geometric isomers” arise from the inability to rotate freely due to the double bond or the single bond of the carbon atoms forming the ring.
- diastereoisomer refers to stereoisomers whose molecules have two or more chiral centers and which are not mirror images of the molecules.
- keys with wedge-shaped solid lines and dotted wedge keys Indicates the absolute configuration of a stereocenter, with a straight solid-line bond and straight dashed keys Indicates the relative configuration of the stereocenter, with a wavy line Indicates wedge-shaped solid-line bond or dotted wedge key or with tilde Indicates a straight solid line key and straight dashed keys
- the following formula (A) means that the compound exists as a single isomer of formula (A-1) or formula (A-2) or as two isomers of formula (A-1) and formula (A-2).
- the following formula (B) means that the compound exists in the form of a single isomer of formula (B-1) or formula (B-2) or in the form of both formula (B-1) and formula (B-2) It exists as a mixture of isomers.
- the following formula (C) represents that the compound exists in the form of a single isomer of formula (C-1) or formula (C-2) or in the form of two isomers of formula (C-1) and formula (C-2). It exists in the form of a mixture.
- tautomer or “tautomeric form” means that isomers with different functional groups are in dynamic equilibrium at room temperature and are rapidly interconvertible. If tautomerism is possible (eg, in solution), then chemical equilibrium of the tautomers can be achieved.
- proton tautomers also called prototropic tautomers
- prototropic tautomers include interconversions via migration of a proton, such as keto-enol isomerization and imine-ene Amine isomerization.
- Valence isomers (valence tautomers) involve interconversions by recombination of some bonding electrons.
- keto-enol tautomerization is the interconversion between two tautomers of pentane-2,4-dione and 4-hydroxypent-3-en-2-one.
- the terms “enriched in an isomer”, “enriched in an isomer”, “enriched in an enantiomer” or “enantiomerically enriched” refer to one of the isomers or enantiomers
- the content of the enantiomer is less than 100%, and the content of the isomer or enantiomer is greater than or equal to 60%, or greater than or equal to 70%, or greater than or equal to 80%, or greater than or equal to 90%, or greater than or equal to 95%, or Greater than or equal to 96%, or greater than or equal to 97%, or greater than or equal to 98%, or greater than or equal to 99%, or greater than or equal to 99.5%, or greater than or equal to 99.6%, or greater than or equal to 99.7%, or greater than or equal to 99.8%, or greater than or equal to 99.9%.
- the terms “isomer excess” or “enantiomeric excess” refer to the difference between the relative percentages of two isomers or two enantiomers. For example, if the content of one isomer or enantiomer is 90% and the other isomer or enantiomer is 10%, then the isomer or enantiomeric excess (ee value) is 80% .
- Optically active (R)- and (S)-isomers as well as D and L-isomers can be prepared by chiral synthesis or chiral reagents or other conventional techniques. If one enantiomer of a compound of the invention is desired, it can be prepared by asymmetric synthesis or derivatization with chiral auxiliary agents, wherein the resulting diastereomeric mixture is separated and the auxiliary group is cleaved to provide pure desired enantiomer.
- a diastereoisomeric salt is formed with an appropriate optically active acid or base, and then a diastereomeric salt is formed by a conventional method known in the art. Diastereomeric resolution is performed and the pure enantiomers are recovered. Furthermore, the separation of enantiomers and diastereomers is usually accomplished by the use of chromatography using chiral stationary phases, optionally in combination with chemical derivatization methods (e.g. amines to amino groups formate).
- the compounds of the present invention may contain unnatural proportions of atomic isotopes at one or more of the atoms that constitute the compounds.
- compounds may be labeled with radioactive isotopes such as tritium ( 3 H), iodine-125 ( 125 I) or C-14 ( 14 C).
- radioactive isotopes such as tritium ( 3 H), iodine-125 ( 125 I) or C-14 ( 14 C).
- heavy hydrogen can be used to replace hydrogen to form deuterated drugs.
- the bond formed by deuterium and carbon is stronger than the bond formed by ordinary hydrogen and carbon.
- deuterated drugs can reduce toxic side effects and increase drug stability. , enhance the efficacy, prolong the biological half-life of drugs and other advantages. All changes in isotopic composition of the compounds of the invention, whether radioactive or not, are included within the scope of the invention.
- "Optional" or “optionally” means that the subsequently described event or circumstance can but need not occur, and that the description includes instances where said
- substituted refers to the replacement of any one or more hydrogen atoms on a specified atom with a substituent, which may include deuterium and hydrogen variants, as long as the valence of the specified atom is normal and the substituted compound is stable of.
- Oxygen substitution does not occur on aromatic groups.
- optionally substituted means that it may or may not be substituted, and unless otherwise specified, the type and number of substituents may be arbitrary on a chemically realizable basis.
- any variable eg, R
- its definition is independent at each occurrence.
- said group may optionally be substituted with up to two R, with independent options for each occurrence of R.
- substituents and/or variations thereof are permissible only if such combinations result in stable compounds.
- linking group When the number of a linking group is 0, such as -(CRR) 0 -, it means that the linking group is a single bond.
- substituent When a substituent is vacant, it means that the substituent does not exist. For example, when X in A-X is vacant, it means that the structure is actually A. When the enumerated substituent does not indicate which atom it is connected to the substituted group, this substituent can be bonded through any atom, for example, pyridyl as a substituent can be connected to any atom on the pyridine ring. The carbon atom is attached to the group being substituted.
- linking group listed does not indicate its linking direction
- its linking direction is arbitrary, for example,
- the connecting group L in the middle is -MW-, at this time -MW- can connect ring A and ring B in the same direction as the reading order from left to right to form It can also be formed by connecting loop A and loop B in the opposite direction to the reading order from left to right
- any one or more sites of the group can be linked to other groups through chemical bonds.
- connection method of the chemical bond is not positioned, and there is an H atom at the connectable site, when the chemical bond is connected, the number of H atoms at the site will decrease correspondingly with the number of chemical bonds connected to become the corresponding valence group.
- the chemical bonds that the site connects with other groups can use straight solid line bonds Straight dotted key or tilde express.
- the straight-shaped solid-line bond in -OCH3 indicates that it is connected to other groups through the oxygen atom in the group;
- the straight dotted line bond indicates that the two ends of the nitrogen atom in the group are connected to other groups;
- the wavy lines in indicate that the 1 and 2 carbon atoms in the phenyl group are connected to other groups;
- C 1-3 alkyl is used to denote a straight or branched chain saturated hydrocarbon group consisting of 1 to 3 carbon atoms.
- the C 1-3 alkyl group includes C 1-2 and C 2-3 alkyl groups, etc.; it can be monovalent (such as methyl), divalent (such as methylene) or multivalent (such as methine) .
- Examples of C 1-3 alkyl include, but are not limited to, methyl (Me), ethyl (Et), propyl (including n-propyl and isopropyl), and the like.
- C n-n+m or C n -C n+m includes any specific instance of n to n+m carbons, for example C 1-12 includes C 1 , C 2 , C 3 , C 4 , C 5 , C 6 , C 7 , C 8 , C 9 , C 10 , C 11 , and C 12 , also including any range from n to n+m, for example, C 1-12 includes C 1-3 , C 1-6 , C 1-9 , C 3-6 , C 3-9 , C 3-12 , C 6-9 , C 6-12 , and C 9-12 etc.; similarly, n to n +m means that the number of atoms on the ring is n to n+m, for example, a 3-12-membered ring includes a 3-membered ring, a 4-membered ring, a 5-membered ring, a 6-membered ring, a 7-membered ring, an 8-membere
- protecting group includes, but is not limited to, "amino protecting group", “hydroxyl protecting group” or “mercapto protecting group”.
- amino protecting group refers to a protecting group suitable for preventing side reactions at the amino nitrogen position.
- Representative amino protecting groups include, but are not limited to: formyl; acyl, such as alkanoyl (such as acetyl, trichloroacetyl or trifluoroacetyl); alkoxycarbonyl, such as tert-butoxycarbonyl (Boc) ; arylmethoxycarbonyl, such as benzyloxycarbonyl (Cbz) and 9-fluorenylmethyloxycarbonyl (Fmoc); arylmethyl, such as benzyl (Bn), trityl (Tr), 1,1-di -(4'-methoxyphenyl)methyl; silyl groups such as trimethylsilyl (TMS) and tert-butyldimethylsilyl (TBS) and the like.
- acyl such as alkanoyl (such as acetyl, trichloroacetyl or trifluoroacetyl); alkoxycarbonyl, such as
- hydroxyl protecting group refers to a protecting group suitable for preventing side reactions of the hydroxy group.
- Representative hydroxy protecting groups include, but are not limited to: alkyl groups such as methyl, ethyl, and tert-butyl; acyl groups such as alkanoyl (such as acetyl); arylmethyl groups such as benzyl (Bn), p-formyl Oxybenzyl (PMB), 9-fluorenylmethyl (Fm) and diphenylmethyl (diphenylmethyl, DPM); silyl groups such as trimethylsilyl (TMS) and tert-butyl Dimethylsilyl (TBS) and the like.
- alkyl groups such as methyl, ethyl, and tert-butyl
- acyl groups such as alkanoyl (such as acetyl)
- arylmethyl groups such as benzyl (Bn), p-formyl Oxybenzyl (P
- the compounds of the present invention can be prepared by a variety of synthetic methods well known to those skilled in the art, including the specific embodiments listed below, the embodiments formed by combining them with other chemical synthesis methods, and the methods well known to those skilled in the art Equivalent alternatives, preferred embodiments include but are not limited to the examples of the present invention.
- the structure of the compounds of the present invention can be confirmed by conventional methods known to those skilled in the art. If the present invention involves the absolute configuration of the compound, the absolute configuration can be confirmed by conventional technical means in the art. For example, in single crystal X-ray diffraction (SXRD), the cultured single crystal is collected with a Bruker D8 venture diffractometer to collect diffraction intensity data, the light source is CuK ⁇ radiation, and the scanning method is: After scanning and collecting relevant data, the absolute configuration can be confirmed by further analyzing the crystal structure by direct method (Shelxs97).
- SXRD single crystal X-ray diffraction
- the solvent used in the present invention is commercially available.
- the following abbreviations are used in the present invention: aq stands for water; THF stands for tetrahydrofuran; n-Bu 4 NF stands for tetrabutylammonium fluoride; iPrOH stands for 2-propanol; mp stands for melting point; DIEA stands for N,N-diisopropyl CbzCl represents benzyl chloroformate; Xantphos represents 4,5-bisdiphenylphosphine-9,9-dimethylxanthene.
- Step 1 Dissolve compound 1-1 (12g, 57.69mmol) in acetonitrile (120mL) at 25°C, add tert-butyloxycarbonyl carbonate (16.37g, 75.00mmol, 17.23mL) and potassium phosphate (23.27 g, 109.61 mmol), stirred at 85°C for 2 hours. Further t-butyloxycarbonyl carbonate (2.52 g, 11.54 mmol, 2.65 mL) was added, and stirred at 85° C. for 16 hours. LC-MS showed that the starting material was consumed and the main peak was the product peak. The reaction solution was filtered, and the filter cake was concentrated under reduced pressure to obtain a crude product. The crude product was purified by column chromatography to obtain compound 1-2. MS ESI calcd: C 10 H 11 Cl 2 N 3 O 4 [M+H] + 308, found 308.
- Step 2 Dissolve compound 1-2 ((10.3g, 33.43mmol)) in i-PrOH (120mL), add 1-3 (7.94g, 35.10mmol) and DIEA (12.74g, 98.56mmol, 17.17mL) , and the mixture was stirred at 50 °C for 16 hours. TLC showed starting material was consumed. The reaction solution was poured into 300 mL of water, filtered, and concentrated under reduced pressure to obtain compound 1-4.
- Step 4 Dissolve compound 1-5 (15g, 32.05mmol) in 75mL of trimethyl orthoformate, add 4-methylbenzenesulfonic acid (600mg, 3.48mmol), and stir at 90°C for 2h.
- LC-MS showed that the starting material was consumed and the main peak was the product peak.
- the reaction solution was diluted with 200 mL of water and extracted with ethyl acetate (50 mL ⁇ 2). The combined organic phases were dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain compound 1-6.
- MS ESI calcd. for C23H32ClN5O4 [M+H] + 478 , found 478 .
- Step 5 Compound 1-6 (16g, 33.47mmol) was dissolved in methanolic hydrochloric acid solution (4M, 48mL), and stirred at 40°C for 2 hours. LCMS showed that the reaction of the raw materials was basically complete, and the main peak was the product peak. The reaction solution was directly concentrated to obtain the crude hydrochloride of compound 1-7. MS ESI calcd. for C13H16ClN5 [M+H] + 278 , found 278 .
- Step 6 The crude hydrochloride (15g, 47.74mmol) of 1-7 was dissolved in methanol (150mL), DIEA (37.10g, 287.06mmol, 50.00mL) was added, the mixture was stirred at 25°C for 10 minutes, and then the compound was added 1-8 (6.19g, 116.65mmol, 7.74mL), stirred at 25°C for 16 hours.
- LC-MS showed that the starting material was consumed and the main peak was the product peak.
- the reaction solution was concentrated to remove methanol, then diluted with 100 mL of water, adjusted to pH 8 by adding saturated sodium bicarbonate solution, and extracted with ethyl acetate (100 mL ⁇ 3).
- Step 7 Dissolve copper bromide (2.55g, 11.42mmol, 534.58 ⁇ L) in acetonitrile (20mL), slowly add tert-butyl nitrite (1.42g, 13.82mmol, 1.64mL), and stir at 25°C for 15 minutes. Cool down to 0°C, then add 1-9 (3g, 9.07mmol), stir at 0°C for 0.5 hours, and stir at 50°C for 32 hours. TLC showed starting material was consumed.
- reaction solution was quenched with 100 mL of saturated sodium bicarbonate solution, and extracted with ethyl acetate (100 mL ⁇ 2), the combined organic phases were dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product.
- MS ESI calcd: C 16 H 17 BrClN 5 [M+1] + 394, found 394.
- Step 8 Dissolve compound 1-10 (100mg, 253.36 ⁇ mol) in dioxane (1mL), add 1-11 (30mg, 322.1 ⁇ mol), cesium carbonate (250mg, 767.3 ⁇ mol), Xantphos (20mg, 34.6 ⁇ mol) and tris(dibenzylideneacetone)dipalladium (40.00mg, 43.68 ⁇ mol), stirred at 100°C for 16 hours.
- LC-MS showed that the starting material was completely consumed, and the main peak was the product peak.
- Step 9 Dissolve compound 1-12 (100 mg, 245.7 ⁇ mol) and compound 1-13 (60 mg, 304.2 ⁇ mol) in dioxane (2 mL), add cesium carbonate (200 mg, 613.8 ⁇ mol) and methanesulfonic acid ( 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-biphenyl-2-yl ) Palladium (II) (25 mg, 27.6 ⁇ mol), replaced with nitrogen three times, then heated up to 100° C., and stirred for 16 hours under nitrogen protection.
- cesium carbonate 200 mg, 613.8 ⁇ mol
- methanesulfonic acid 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-bipheny
- Step 10 Dissolve compound 1-14 (140 mg, 246.6 ⁇ mol) in dichloromethane (2 mL), add trifluoroacetic acid (2.16 g, 18.9 mmol, 1.4 mL), and stir at 25° C. for 30 minutes.
- LC-MS showed that the starting material was consumed and the main peak was the product peak.
- the reaction solution was directly concentrated to obtain the crude product, which was prepared and separated by high performance liquid chromatography (column: Phenomenex Synergi C18 150*25mm*10 ⁇ m; mobile phase: [water (0.1% TFA)-acetonitrile]; acetonitrile%: 1%-30% , 10 minutes) to obtain compound 1-15.
- Step 1 Dissolve copper chloride (1.77g, 13.15mmol) in acetonitrile (30mL), slowly add tert-butyl nitrite (1.35g, 13.12mmol, 1.56mL), and stir at 25°C for 15 minutes. Cool down to 0°C, then add 1-9 (2.9g, 8.77mmol), stir at 0°C for 0.5 hour, and stir at 50°C for 32 hours.
- LC-MS showed a small amount of starting material remaining, but the main peak was the product peak.
- Step 2 Dissolve 2-1 (400mg, 1.14mmol) in n-butanol (4mL), add sodium methylthiolate (80mg, 1.14mmol, 72.73 ⁇ L), and stir at 60°C for 16 hours.
- LC-MS showed that the starting material was consumed and the main peak was the product peak.
- Step 3 Dissolve compound 2-2 (250mg, 690.81 ⁇ mol) in methanol (5mL), add diacetoxyiodobenzene (900mg, 2.79mmol), and ammonium carbamate (320mg, 4.10mmol), and the reaction solution is 25°C Stirring was uncovered for 2 hours.
- LC-MS showed that the starting material was completely consumed, and the main peak was the product peak.
- the reaction solution was diluted with 20 mL of water, and then extracted with dichloromethane (15 mL ⁇ 3). The combined organic phases were dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product.
- Step 4 Dissolve compound 2-3 (120mg, 305.4 ⁇ mol) and compound 1-13 (72mg, 365.1 ⁇ mol) in dioxane (2mL), add cesium carbonate (360mg, 1.1mmol) and methanesulfonic acid ( 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-biphenyl-2-yl ) Palladium (II) (36 mg, 39.7 ⁇ mol), replaced with nitrogen three times, then heated to 100° C., and stirred for 16 hours under the protection of nitrogen.
- cesium carbonate 360mg, 1.1mmol
- methanesulfonic acid 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-biphenyl-2-
- Step 1 Dissolve compound 3-1 (1 g, 9.69 mmol, 917.4 ⁇ L) in aqueous sodium hydroxide solution (10 mL), add CbzCl (2.40 g, 14.1 mmol, 2 mL) at zero temperature, and stir at 25° C. for 16 hours. After the reaction was completed, the pH was adjusted to 7 with 1M HCl, and then extracted with ethyl acetate (50 mL ⁇ 3). The organic phases were combined, dried over sodium sulfate, filtered, and concentrated to obtain compound 3-2.
- Step 4 Dissolve compound 3-4 (1.3g, 4.19mmol) in methanol (20mL), add wet palladium carbon (130mg, 10%) successively under the protection of nitrogen, replace with hydrogen three times, and the reaction solution is kept under the protection of hydrogen for 25 °C and stirred for 12 hours. After the reaction was completed, it was filtered, and the filtrate was concentrated to obtain compound 3-5.
- Step 5 Dissolve compound 1-10 (100mg, 253.4 ⁇ mol) in dioxane (2mL), add 3-5 (60mg, 340.5 ⁇ mol), cesium carbonate (200mg, 613.8 ⁇ mol), Xantphos (20mg, 34.6 ⁇ mol) and Pd 2 (dba) 3 (20mg, 21.8 ⁇ mol), stirred at 100°C for 16 hours.
- LC-MS showed that the starting material was completely consumed, and the main peak was the product peak.
- MS ESI calcd: C 22 H 28 ClN 7 O 2 S [M+H] + 490, found 490.
- Step 6 Dissolve compound 3-6 (200mg, 408.2 ⁇ mol) and compound 1-13 (100mg, 507.0 ⁇ mol) in dioxane (2mL), add cesium carbonate (400mg, 1.2mmol) and methanesulfonic acid ( 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-biphenyl-2-yl ) Palladium (II) (50 mg, 55.2 ⁇ mol), replaced with nitrogen three times, then heated to 100° C., and stirred for 16 hours under nitrogen protection.
- cesium carbonate 400mg, 1.2mmol
- methanesulfonic acid 2-Dicyclohexylphosphino-3,6-dimethoxy-2,4,6-triisopropyl-1,1-biphenyl)(2-amino-1,1-biphenyl-2-y
- Step 7 Dissolve compound 3-7 (150 mg, 272.4 ⁇ mol) in a mixed solution of methanol (1 mL) and tetrahydrofuran (1 mL), add potassium carbonate (200 mg, 1.5 mmol), and stir at 25° C. for 16 hours. After the reaction was completed, the reaction solution was diluted with 20 mL of water, and then extracted with dichloromethane (20 mL ⁇ 3). The organic phases were combined, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product.
- the crude product was prepared and separated by high performance liquid chromatography (column: Phenomenex Synergi C18 150*25mm*10 ⁇ m; mobile phase: [water (0.1% TFA)-ACN]; B(ACN)%: 5%-35%, 10 minutes) to obtain 3-8.
- JAK1 Invitrogen, Cat. No. PV4288
- JAK2 Invitrogen, Cat. No. PV4288
- JAK3 Invitrogen, Cat. No. PV4080
- TYK2 Invitrogen, Cat. No. PR8440C
- ATP Sigma, Cat. No. A7699-1G
- DMSO Sigma, Cat. No. D2650
- DTT Sigma, Cat. No. 43815
- 384-well plate_assay plate Perkin Elmer, Cat. No. 6007299
- LANCE Ultra ULight TM -JAK-1 peptide Perkin Elmer, Cat. No. TRF0121
- LANCE Eu-W1024 anti-phosphotyrosine Acid PT66
- TM Assay Buffer Perkin Elmer, Cat. No. CR97-100).
- JAK1,2,3 and TYK2 used in this experiment method for activity detection.
- the enzyme, ULight-labeled peptide substrate, ATP, and detection compound are mixed and the reaction is incubated.
- EDTA was added to terminate the reaction, and at the same time, Eu-labeled antibody was added.
- kinase assays the binding of europium-labeled anti-phosphorylated substrate antibodies to phosphorylated ULight-labeled substrates brings donor and acceptor molecules into mutual proximity. After irradiation with 320nm wavelength light, the kinase reacts, and the energy of the europium donor will be transferred to the ULight acceptor dye to generate light with a wavelength of 665nm. The intensity of light emission is proportional to the phosphorylation level of the ULight substrate.
- the final test concentration of the compound is from 1 ⁇ M to 0.017nM, 3-fold serial dilution, 11 concentrations.
- the final test concentration of the reference compound Tofacitinib ranged from 1 ⁇ M to 0.017nM, 3-fold serial dilution, 11 concentrations.
- the content of DMSO in the assay reaction was 1%.
- the buffer includes: 50mM HEPES (pH 7.5), 0.01% Brij-35, 10mM MgCl 2 , 1mM EDTA, 1mM DTT.
- 4nM TYK2 and 50nM substrate were mixed with pre-diluted compounds at different concentrations for 15 minutes. Add 15 ⁇ M ATP to start the reaction and incubate at room temperature for 90 minutes. After the reaction was completed, antibody detection was added, and after incubation at room temperature for 60 minutes, Evnvision detection was performed to collect data.
- XLfit5 software mode205 was used for data analysis and plotting to obtain the IC 50 data in the following table.
- the compound of the present invention exhibits good inhibitory activity in the in vitro activity test of the two kinase subtypes JAK1 and JAK2.
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Abstract
Description
Claims (15)
- 式(Ⅰ)化合物或其药学上可接受的盐,其中,L 1为-(CH 2) m-、-C(=O)-或-CH 2-C(=O)-;D 1为O或CH 2;T 1为N或CH;R 11为H、CN或C 1-3烷基,其中所述C 1-3烷基任选被1、2或3个R a取代;R 2为H或C 1-3烷基,其中所述C 1-3烷基任选被1、2或3个R b取代;R 4为H或C 1-3烷基;E 1和E 2分别独立地为O或NH;E 3为CH 2或O;R 31、R 32和R 34分别独立地为C 1-3烷基;R 33为H或C 1-3烷基;q为1或2;m为0、1或2;n为0、1或2;r为0、1或2;R a和R b分别独立地为F、Cl、Br、I、OH、CN或NH 2。
- 根据权利要求1所述的化合物或其药学上可接受的盐,其中R 11为H、CN或CH 3,其中所述CH 3任选被 1、2或3个R a取代。
- 根据权利要求2所述的化合物或其药学上可接受的盐,其中R 11为H、CN或CF 3。
- 根据权利要求1所述的化合物或其药学上可接受的盐,其中R 31、R 32和R 34分别独立地为CH 3或-CH 2CH 3。
- 根据权利要求1所述的化合物或其药学上可接受的盐,其中R 33为H或CH 3。
- 根据权利要求1所述的化合物或其药学上可接受的盐,其中R 4为H、CH 3、CH 2CH 3或CH 2CH 2CH 3。
- 根据权利要求1~13任意一项所述化合物或其药学上可接受的盐在制备治疗与肠道的Pan-JAK相关的疾病的药物中的应用。
- 根据权利要求14所述的应用,其中与肠道Pan-JAK相关的疾病是指炎症性肠病。
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CN107667108A (zh) * | 2015-05-28 | 2018-02-06 | 施万生物制药研发Ip有限责任公司 | 作为jak激酶抑制剂的萘啶化合物 |
CN109071529A (zh) * | 2016-04-28 | 2018-12-21 | 施万生物制药研发Ip有限责任公司 | 作为jak激酶抑制剂的嘧啶化合物 |
WO2020108613A1 (zh) * | 2018-11-30 | 2020-06-04 | 江苏豪森药业集团有限公司 | 杂芳类衍生物调节剂、其制备方法和应用 |
WO2020108516A1 (zh) * | 2018-11-27 | 2020-06-04 | 江苏豪森药业集团有限公司 | 含氮杂芳类衍生物调节剂、其制备方法和应用 |
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CN107667108A (zh) * | 2015-05-28 | 2018-02-06 | 施万生物制药研发Ip有限责任公司 | 作为jak激酶抑制剂的萘啶化合物 |
CN109071529A (zh) * | 2016-04-28 | 2018-12-21 | 施万生物制药研发Ip有限责任公司 | 作为jak激酶抑制剂的嘧啶化合物 |
WO2020108516A1 (zh) * | 2018-11-27 | 2020-06-04 | 江苏豪森药业集团有限公司 | 含氮杂芳类衍生物调节剂、其制备方法和应用 |
WO2020108613A1 (zh) * | 2018-11-30 | 2020-06-04 | 江苏豪森药业集团有限公司 | 杂芳类衍生物调节剂、其制备方法和应用 |
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WO2024191996A1 (en) | 2023-03-13 | 2024-09-19 | Incyte Corporation | Bicyclic ureas as kinase inhibitors |
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