[go: up one dir, main page]

WO2022021841A1 - Novel coronavirus main protease inhibitor, and preparation method therefor and use thereof - Google Patents

Novel coronavirus main protease inhibitor, and preparation method therefor and use thereof Download PDF

Info

Publication number
WO2022021841A1
WO2022021841A1 PCT/CN2021/076400 CN2021076400W WO2022021841A1 WO 2022021841 A1 WO2022021841 A1 WO 2022021841A1 CN 2021076400 W CN2021076400 W CN 2021076400W WO 2022021841 A1 WO2022021841 A1 WO 2022021841A1
Authority
WO
WIPO (PCT)
Prior art keywords
alkyl
alkylene
substituted
none
halogenated
Prior art date
Application number
PCT/CN2021/076400
Other languages
French (fr)
Chinese (zh)
Inventor
杨胜勇
李琳丽
Original Assignee
四川大学
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from CN202011568282.7A external-priority patent/CN114057702B/en
Application filed by 四川大学 filed Critical 四川大学
Publication of WO2022021841A1 publication Critical patent/WO2022021841A1/en

Links

Images

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/40Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil
    • A61K31/4025Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil not condensed and containing further heterocyclic rings, e.g. cromakalim
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/41Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
    • A61K31/42Oxazoles
    • A61K31/422Oxazoles not condensed and containing further heterocyclic rings
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D207/00Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D207/02Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom
    • C07D207/04Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members
    • C07D207/10Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D207/16Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D403/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
    • C07D403/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
    • C07D403/12Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a chain containing hetero atoms as chain links

Definitions

  • the invention belongs to the technical field of organic synthetic medicines, and in particular relates to an inhibitor of novel coronavirus main protease, a preparation method and pharmaceutical use thereof.
  • SARS-CoV-2 severe acute respiratory syndrome coronavirus 2
  • alpha-interferon and anti-HIV drugs lopinavir/ritonavir have been used clinically combination, but still has very limited efficacy and may have toxic side effects.
  • Remdesivir a broad-spectrum antiviral drug developed by Gilead Sciences, Inc., is also being explored to treat COVID-19, but more data is needed to prove its efficacy. Therefore, there is still an urgent need to develop safe and effective anti-SARS-CoV-2 drugs.
  • the genomic RNA of coronavirus is about 30knt long, has a 5' cap structure and a 3'-poly-a tail, and contains at least 6 open reading frames (ORFs).
  • ORF1a/b occupies approximately two-thirds of the genome length and directly translates two polyproteins: pp1a and pp1ab, with an a-1 frameshift between ORF1a and ORF1b.
  • Mpro major protease
  • 3CLpro 3C-like protease
  • PEPs papain-like proteases
  • Nonstructural proteins are involved in the production of subgenomic RNAs, encoding the four major structural proteins (envelope (E), membrane (M), spine (S), and nucleocapsid (N) proteins) and other auxiliary proteins to complete the Virus replication and invasion process.
  • E envelope
  • M membrane
  • S spine
  • N nucleocapsid
  • M pro is conserved among coronaviruses, and the substrates of M pro in different coronaviruses have some common features: amino acids from N-terminal to C-terminal are numbered in a paired form (-P4-P3-P2-P1 ⁇ P1 '-P2'-P3'), the cleavage site is between P1 and P1'.
  • Mpro has a unique substrate preference for glutamine at the P1 site (Leu-Gln ⁇ (Ser, Ala, Gly)), which is absent in host proteases, suggesting that by targeting the virus It is feasible to achieve high selectivity with M pro .
  • the absolute dependence of the virus on the correct function of this protease, coupled with the lack of a homologous human protease makes Mpro an ideal antiviral target.
  • the purpose of the present invention is to provide the inhibitor of novel coronavirus main protease and its preparation method and pharmaceutical use.
  • the present invention provides the compound shown in formula I, or its pharmaceutically acceptable salt, or its stereoisomer, or its optical isomer, or its isotopic substitution form:
  • X is O or S
  • Ring A is selected from the following groups unsubstituted or substituted by one or more R 6 : 5-6 membered saturated heterocyclyl, 5-6 membered unsaturated heterocyclyl, saturated heterofused ring, unsaturated heterofused ring group; R 6 is independently selected from C 1-6 alkyl, C 1-6 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
  • R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-4 alkenylene, halogenated C 2- 4 alkenylene, L 4 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is The following groups are unsubstituted or substituted by one or more R 3b : 5-6 membered aryl, 5-6 membered heteroaryl, unsaturated heterofused ring group, unsaturated fused ring alkyl; R 3b are each independently Selected from C 1-5 alkyl substituted or unsubstituted by R 3c , C 1-5 alkoxy substituted or unsubstituted by R 3c , halogen, phenyl substituted or unsubstituted by R 3c , NR 14 R
  • R 5 is selected from COR 8 or WCOOR 7 ; wherein, R 8 is selected from hydrogen or W is selected from none, C 1-4 alkylene, C 2-4 alkenylene, C 2-4 alkynylene, R 7 is selected from C 1-6 alkyl; M is selected from none, CO, NH, CONH , NHCO, COO or OCO, L 0 is selected from none, C 1-4 alkylene, C 2-4 alkenylene, L 1 is selected from none, C 1-4 alkylene, C 2-4 alkenylene , R 8a is selected from C 1-5 alkyl, halogenated C 1-5 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, 5-6 membered aryl or 5-6 membered aryl Yuan Heteroaryl.
  • X is O or S
  • n is selected from an integer of 0-3, preferably an integer of 0-2;
  • R 1 and R 2 are each independently selected from hydrogen, C 1-5 alkyl, C 1-5 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
  • R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-3 alkenylene, and L 4 is selected from none , C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is unsubstituted or by one or more R 3b Substituted the following groups: phenyl,
  • R 3b are each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkyl Oxyl, halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR 14 R 15 , Hydroxyl, R 14 and R 15 are each independently selected from hydrogen or C 1-4 alkyl;
  • R 8 is selected from hydrogen or M is selected from None, CO, NH, CONH, NHCO, COO or OCO, L 0 is selected from None, C 1-3 alkylene, C 2-4 alkenylene, L 1 is selected from None, C 1-3 alkylene Alkyl, C 2-4 alkenylene, R 8a is selected from C 1-4 alkyl, halogenated C 1-4 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, A 5- to 6-membered aryl group or a 5- to 6-membered heteroaryl group.
  • R 1 and R 2 are each independently selected from hydrogen, C 1-4 alkyl, C 1-4 alkoxy, halogen, and hydroxyl;
  • R 3 is selected from L 3 M 0 L 4 R 3a ;
  • L 3 is selected from none, C 1-3 alkylene, halogenated C 1-3 alkylene, C 2-3 alkenylene,
  • L 4 is selected from none, C 1-3 3 alkylene, halogenated C 1-3 alkylene, M 0 is selected from none, O, NH, CO, CONH,
  • R 3a is phenyl, phenyl substituted by one or more R 3b , R 3b
  • R 3b Each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkoxy , halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR
  • R 4 is selected from C 1-2 alkyl, COOR 10 , substituted or unsubstituted phenyl; the substituent is selected from hydroxyl, nitro; R a1 and R a2 are independently selected from hydrogen, C 1-3 alkyl, halogen; R 10 is C 1-3 alkyl;
  • R 8 is selected from hydrogen, CONHR 11 , L 2 COOR 12 , C 1-4 alkyl, halogenated C 1-4 alkyl; R 11 is selected from 3-6 membered saturated cycloalkyl, C 1-4 alkyl , benzyl, L 2 is a C 1-2 alkylene group, a C 2-3 alkenylene group, and R 12 is a C 1-3 alkyl group.
  • formula II is shown as formula II-1 or formula II-2:
  • X is O or S, preferably O;
  • R 1 and R 2 are each independently selected from hydrogen, C 1-3 alkyl, preferably methyl;
  • n is selected from an integer from 0 to 3
  • R 3b is independently selected from phenyl, halogenated phenyl, halogen, C 1-3 alkyl, halogenated or deuterated C 1-3 alkyl, C 1- 3 alkoxy, halogenated or deuterated C 1-3 alkoxy, hydroxyl;
  • R a1 and R a2 are independently selected from hydrogen, C 1-3 alkyl, and halogen;
  • R b is selected from hydrogen, C 1-3 alkyl, halogenated C 1-3 alkyl;
  • L 3 is selected from none, C 1-2 alkylene, halogenated C 1-2 alkylene, C 2 alkenylene, L 4 is selected from none, C 1-3 alkylene, halogenated C 1-3 Alkylene, M 0 is selected from none, O, NH, CO, CONH;
  • the halogen is preferably chlorine or fluorine.
  • the structure of the compound is one of the following structures:
  • the present invention also provides a pharmaceutical composition, wherein the pharmaceutical composition is the above compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substitution form thereof. Active ingredient, plus pharmaceutically acceptable excipients.
  • the present invention also provides the use of the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substituted form thereof, in the preparation of a coronavirus proteolytic enzyme inhibitor; preferably
  • the coronavirus proteolytic enzyme is a coronavirus main protease; more preferably, the coronavirus proteolytic enzyme is SARS-COV-2M pro .
  • the present invention also provides the use of the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substituted form thereof, in the preparation of an anti-coronavirus drug, preferably,
  • the coronavirus is a novel coronavirus SARS-CoV-2.
  • the present invention also provides the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof, or an isotopic substituted form thereof in the preparation of prevention and/or treatment of SARS-COV-2M pro
  • the disease related to SARS-COV-2M pro is novel coronavirus pneumonia COVID-19.
  • the medicine of described coronavirus proteolytic enzyme inhibitor, anti-coronavirus or the medicine of prevention and/or treatment of viral pneumonia can suppress the activity of SARS-COV-2M pro and/or can suppress SARS-COV-2 infection cell.
  • C a-b alkyl denotes any alkyl group containing "a" to "b” carbon atoms.
  • C 1-6 alkyl refers to a straight or branched chain alkyl group containing 1 to 6 carbon atoms.
  • Substituted herein refers to the replacement of 1, 2 or more hydrogen atoms in a molecule by a different atom or molecule, including 1, 2 or more substitutions on isotopic or isotopic atoms in the molecule .
  • Isotopic substitution form refers to a compound obtained by replacing one or more than two atoms in a compound with its corresponding isotope, for example, hydrogen in the compound is replaced by protium, deuterium or tritium.
  • “Pharmaceutically acceptable” means that a carrier, vehicle, diluent, adjuvant, and/or salt formed is generally chemically or physically compatible with the other ingredients that make up a pharmaceutical dosage form and physiologically compatible with receptor compatible.
  • Salt is an acid and/or base salt of a compound or its stereoisomer with inorganic and/or organic acids and/or bases, including zwitterionic salts (inner salts), and quaternary ammonium salts , such as alkylammonium salts. These salts can be obtained directly in the final isolation and purification of the compounds. It can also be obtained by mixing a compound, or a stereoisomer thereof, with a certain amount of acid or base as appropriate (eg, equivalent). These salts may form a precipitate in solution and be collected by filtration, or recovered after evaporation of the solvent, or obtained by lyophilization after reaction in an aqueous medium.
  • “Pharmaceutically acceptable salts” may be hydrochloride, sulfate, citrate, benzenesulfonate, hydrobromide, hydrofluoride, phosphate, acetate, propionate, Succinate, oxalate, malate, succinate, fumarate, maleate, tartrate or trifluoroacetate.
  • Halogen is fluorine, chlorine, bromine or iodine.
  • Aryl refers to an all-carbon monocyclic or fused polycyclic (ie, rings sharing adjacent pairs of carbon atoms) groups having a conjugated pi-electron system, such as phenyl.
  • the aryl group contains no heteroatoms, such as nitrogen, oxygen, or sulfur, while the point of attachment to the parent must be on a carbon atom on the ring with a conjugated pi-electron system.
  • Aryl groups can be substituted or unsubstituted.
  • the "5- to 6-membered aryl group” refers to an aryl group having 5 or 6 ring carbon atoms.
  • Heteroaryl refers to a heteroaromatic group containing one to more heteroatoms.
  • the heteroatoms referred to herein include oxygen, sulfur and nitrogen.
  • the heteroaryl group can be optionally substituted or unsubstituted.
  • the "5- to 6-membered heteroaryl group” refers to a heteroaryl group having 5 or 6 ring atoms.
  • Cycloalkyl refers to a saturated or unsaturated cyclic hydrocarbon substituent; the cyclic hydrocarbon may be monocyclic or polycyclic.
  • a 3- to 6-membered saturated cycloalkyl group refers to a saturated cycloalkyl group having 3 to 6 ring carbon atoms.
  • Heterocyclyl refers to a saturated or unsaturated cyclic hydrocarbon substituent; cyclic hydrocarbons may be monocyclic or polycyclic and carry at least one ring heteroatom (including but not limited to O, S or N).
  • the "3- to 6-membered saturated heterocyclic group” refers to a saturated heterocyclic group having 3 to 6 ring atoms.
  • Fused cycloalkyl refers to a polycyclic cycloalkyl in which two rings share two adjacent carbon atoms.
  • Hetero-fused ring group refers to a polycyclic heterocyclic group, which contains at least one heteroatom, and two rings in the polycyclic heterocyclic group share two adjacent carbon atoms or heteroatoms.
  • Alkylene refers to a group in which an alkyl group has lost one atom.
  • C 1 alkylene C 2 alkylene:
  • Alkenylene refers to a group in which an alkenyl group has lost one atom.
  • alkenyl group has lost one atom.
  • Alkynylene refers to a group in which an alkynyl group has lost one atom.
  • alkynyl group For example C 2 alkynyl:
  • the experimental results show that the present invention provides a compound that can effectively inhibit the activity of the new coronavirus main protease M pro , the compound can effectively inhibit the replication of SARS-COV-2 virus in cells, and inhibit the SARS-COV-2 virus in cells.
  • Infection resists in vivo SARS-COV-2 infection in transgenic mice; reduces viral load in the lungs of SARS-COV-2-infected transgenic mice, and reduces lung chemokine ligand 10 (CXCL10) and beta-type in mice
  • the gene expression level of interferon (IFN- ⁇ ) reduces the number of neutrophils (NEU) and macrophages (MAC) in the lungs of mice, and improves the pathological damage of the lungs of mice.
  • the compounds provided by the present invention also have good in vivo safety and pharmacokinetic properties.
  • the compounds of the present invention have very good application prospects in the preparation of SARS-CoV-2 M pro inhibitors, anti-SARS-CoV-2 drugs, and drugs for preventing and/or treating novel coronavirus pneumonia.
  • Fig. 1 is the inhibitory activity curve of compound 26 to SARS-COV-2M pro .
  • Fig. 2 is the inhibitory activity curve of compound 33 on SARS-COV-2M pro .
  • Figure 3 is the inhibitory activity curve of compound 37 against SARS-COV-2M pro .
  • Figure 4 Inhibition experiments of compounds on the replication of SARS-COV-2 in human alveolar epithelial cells.
  • FIG. 1 Pulmonary viral load in SARS-CoV-2-infected mice.
  • Figure 6 Lung histopathological sections (3dpi) of SARS-CoV-2-infected mice.
  • Figure 7 Representative cytokine expression levels (3dpi) in the lungs of SARS-CoV-2-infected mice.
  • Figure 8 Pulmonary neutrophil and macrophage counts (3 dpi) in SARS-CoV-2-infected mice.
  • the raw materials and equipment used in the present invention are all known products, obtained by purchasing commercially available products.
  • the compound 1 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • i a, dimethyl 2-fluoromalonate, benzyl alcohol, toluene, p-toluenesulfonic acid, 110°C; b, isopropanol, n-hexane, -10°C;
  • Dibenzyl 2-fluoromalonate (18.4g, 60.9mmol, 1.0eq) was dissolved in 100mL of isopropanol, the temperature was raised to 45°C, sodium hydroxide (2.55g, 63.9mmol, 1.05eq) was dissolved in 60mL of water and then slowly Slowly drip, dripping time > 1 hour. After the dropwise addition, the reaction was continued for 30 minutes, the isopropanol was evaporated under reduced pressure, 50 mL of water was added, and the pH value was adjusted to about 9 with saturated sodium bicarbonate solution.
  • the aqueous phase was extracted twice with dichloromethane 20mL ⁇ 2 dichloromethane, the pH value of the aqueous phase was adjusted to 1-2 with 6mol/L hydrochloric acid, extracted three times with 40mL ⁇ 3 isopropyl ether, the organic phases were combined and washed with 30mL saturated brine once.
  • the organic phase was dried by adding anhydrous magnesium sulfate, filtered, and concentrated to obtain a viscous residue, which was added with 60 mL of n-hexane and stirred overnight. A white solid was precipitated, filtered, and the filter cake was dried under vacuum at 40 °C to obtain 6.5 g of the product with a yield of 50.3%.
  • Boc-L-aspartate 4-methyl ester (2.2g, 8.8mmol, 1.0eq) was dissolved in 50mL of anhydrous tetrahydrofuran, protected by argon replacement, cooled to 0°C, added CDI (1.5g, 9.3mmol, 1.05eq) ) and incubated for 1 hour.
  • the reaction solution was cooled to -20°C, 1.5 eq of intermediate 4 was slowly added, and the reaction was incubated for 1 hour, and then the temperature was raised to room temperature for 6 hours.
  • reaction solution was slowly poured into 300 mL of 2M dilute hydrochloric acid under an ice-water bath, extracted three times with 100 mL ⁇ 3 ethyl acetate, the organic phases were combined, washed with saturated sodium bicarbonate solution until weakly alkaline, and washed once with 50 mL of saturated brine. Anhydrous magnesium sulfate was added to dry, filtered and concentrated, and the obtained crude product was directly used in the next reaction.
  • the compound 3 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • Boc-L-dimethyl glutamate (12 g, 43.6 mmol, 1.0 eq) was dissolved in 100 mL of anhydrous tetrahydrofuran, protected by argon replacement, cooled to -78°C, and slowly added dropwise 94 mL of LiHMDS tetrahydrofuran solution (1M tetrahydrofuran solution, 94mmol, 2.2eq), the reaction was incubated for 1 hour after the dropwise addition. 3.24 mL of bromoacetonitrile (46.6 mmol, 1.1 eq) was slowly added dropwise to the reaction solution, and the reaction was incubated for 6 hours and then quenched with 50 mL of saturated ammonium chloride solution.
  • the pH value of saturated citric acid aqueous solution was adjusted to neutral, the tetrahydrofuran was evaporated under reduced pressure, extracted once with 10 mL of ethyl acetate, the aqueous phase was adjusted to pH 3-4 with saturated aqueous citric acid solution, extracted three times with 20 mL ⁇ 3 ethyl acetate, and the organic The phase was washed with 20 mL of saturated brine, dried over anhydrous magnesium sulfate, filtered, and concentrated to obtain 0.78 g of an off-white solid with a yield of 93.2%.
  • reaction solution was slowly poured into 300 mL of 2M dilute hydrochloric acid under an ice-water bath, extracted three times with 100 mL ⁇ 3 ethyl acetate, the organic phases were combined, washed with saturated sodium bicarbonate solution until weakly alkaline, and washed once with 50 mL of saturated brine. Anhydrous magnesium sulfate was added to dry, filtered and concentrated, and the obtained crude product was directly used in the next reaction.
  • intermediate 18 500 mg was dissolved in 5 mL of dichloromethane, and then 5 mL of dioxane hydrochloride was added. After the reaction was completed, the mixture was spin-dried to obtain intermediate 19 with a yield of 85%.
  • Ethyl (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylate (Intermediate 22, 200 mg, 0.52 mmol) was dissolved in 20 mL of methanol, then 2M sodium hydroxide solution (10 mL) was added, and the reaction was stirred at 25 ° C for 4 hours. After the reaction was monitored by TLC, the methanol was spin-dried, and the pH was adjusted to weakly acidic with hydrochloric acid. Methyl chloride was extracted three times, and the organic phases were combined and dried over anhydrous sodium sulfate, and then the crude product was selected and dried, and the crude product was directly carried out to the next step.
  • the compound 9 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • the raw material 23 (quinoline 2-carboxylic acid 1.0 g, 11.6 mmol), 1-hydroxybenzotriazole (2.03 g, 15.08 mmol), 1-(3-dimethylaminopropyl)-3-ethylcarbon two Imine hydrochloride (4.43g, 23.3mmol), 30mL of N,N-dimethylformamide was placed in a round-bottomed flask and stirred at room temperature for 0.5 hours, 2.5mL of N,N-diisopropylethylamine was added, and 0.59 mL of N,N-diisopropylethylamine was added.
  • the intermediate 28 (((1R,5S)-6,6-dimethyl-3-(quinoline-2-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carbonyl)-L -Phenylalanine) 500 mg, dissolved in 30 mL of dry methanol, sodium borohydride was added at room temperature, stirred for 3 hours, quenched by adding water, spin-dried methanol, and the aqueous phase was extracted with ethyl acetate (50 mL ⁇ 3), The collected organic phase was dried with sodium sulfate, and after suction filtration, the organic phase was spin-dried to obtain intermediate 29 with a yield of 80%.
  • the compound 14 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • reaction was carried out under argon protection at room temperature for 12 hours.
  • the compound 15 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • TLC detected the end of the reaction, quenched by adding water, spin-dried methanol, and extracted the remaining aqueous phase with ethyl acetate (50 mL ⁇ 3). The organic phases were combined, dried with anhydrous sodium sulfate, filtered and spin-dried to obtain a white solid as a crude product, which was directly used in the next reaction.
  • the compound 42 of the present invention was prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route were as follows:
  • reaction was further carried out for 2 hours, and then acetic acid and tetrahydrofuran were added under low temperature conditions for quenching, and the resulting black suspension was further stirred for 10 minutes while warming to room temperature.
  • the reaction was further diluted with ethyl acetate, washed with water, saturated sodium bicarbonate solution and saturated brine, dried over anhydrous sodium sulfate, filtered and concentrated by column chromatography to obtain a pale yellow solid as intermediate 38.
  • the compound 50 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
  • Recombinant SARS-CoV-2M pro (750 nM final concentration) was mixed with serial dilutions of each compound in 25 ⁇ L of assay buffer (20 mM Tris–HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 2 mM DTT) and incubated 10 minutes.
  • the reaction was initiated by adding 25 ⁇ L of fluorogenic substrate (MCA-AVLQ ⁇ SGFR-Lys(Dnp)-Lys-NH2) at a final concentration of 20 ⁇ M, and the fluorescence signal at 320nm (excitation)/405nm (emission) was measured with a microplate reader.
  • Vmax of the reaction to which different concentrations of compound were added and the Vmax of the reaction to which DMSO was added was calculated and used to generate an IC50 curve.
  • half inhibitory concentration (IC50 ) values against SARS-CoV-2M pro were measured at 9 concentrations and 3 independent replicates. All experimental data were analyzed using GraphPad Prism software.
  • Anti-M pro IC 50 ( ⁇ M) 1 1.1 2 0.11 3 0.018 4 0.012 5 0.011 6 0.009 7 0.015 8 0.017 9 24.24 10 0.585 11 0.960 12 16.93
  • the compounds of the present invention can effectively inhibit the activity of SARS-CoV-2M pro , and can be used to prepare SARS-CoV-2M pro inhibitors and anti-new coronavirus medicines, and the preparation of medicines for the prevention and/or treatment of novel coronavirus pneumonia.
  • Experimental Example 2 Inhibition experiment of the compounds of the present invention on cell death caused by SARS-COV-2 infection of Vero E6 cells
  • the antiviral activity of the compounds was preliminarily evaluated by detecting the inhibitory effect of the compounds on cell death caused by SARS-COV-2 infection of Vero E6 cells.
  • NT 33 5.57 34 1.64 35 NT 36 2.23 37 2.97 38 NT 39 NT 40 NT 41 NT 42 NT 43 0.53 44 0.66 45 0.83 46 NT 47 NT 48 NT 49 NT 50 NT 51 NT 52 NT 53 NT 55 NT 56 NT 57 NT 58 NT 59 NT 60 NT 61 NT 62 NT 63 NT 64 NT 65 NT 66 NT 67 NT 68 NT 69 NT 70 NT 71 NT 72 NT 73 NT
  • NT stands for untested cell viability
  • the compound of the present invention can effectively inhibit the cell death caused by SARS-COV-2 infection of Vero E6 cells, indicating that the compound of the present invention can effectively inhibit the replication of SARS-COV-2 virus in cells.
  • Cytotoxicity assessment of compounds was performed using Vero E6 cells.
  • the specific experimental protocol is as follows: Vero E6 cells were seeded in a 96-well plate at a cell density of 2 ⁇ 10 4 cells/well, 100 ⁇ L/well, and incubated overnight at 37° C. in a 5% CO2 incubator. The next day, 200 ⁇ L of drug-containing medium was added to each well. The compound was initially diluted at 200 ⁇ M, with a 5-fold gradient dilution. There were 6 gradients in total. Three replicate wells were set for each concentration. Each group of experiments set a negative control and blank without drug. control. After 72 hours of drug treatment, the cell viability was detected by using the CCK-8 kit, and the toxicity of the compound to Vero E6 cells and the cytotoxicity concentration (CC 50 ) value were calculated. All experimental data were analyzed using GraphPad Prism software.
  • the compounds of the present invention have very low toxicity to Vero E6 cells.
  • the anti-SARS-COV-2 activity of compounds 3 and 39 in Vero E6 cells was evaluated using the plaque assay.
  • Vero E6 was seeded in a 24-well cell culture plate at 1.0 ⁇ 10 5 cells per well, and incubated overnight at 37°C for use. After adding the serially diluted drug, SARS-CoV-2 infected cells were added, and the MOI was about 0.002. After culturing in a 37°C cell incubator for 1 hour, the drug-containing infection supernatant was removed, washed with PBS, and 0.5 mL of sodium carboxymethyl cellulose containing different concentrations of drugs was added, and the final concentration of sodium carboxymethyl cellulose was 0.9%. Placed in a 37°C cell incubator for 72 hours.
  • inhibition rate (%) (number of plaques in virus control wells - number of plaques in sample wells)/number of plaques in virus control wells*100
  • the experimental results are shown in Table 5.
  • the compounds of the present invention can effectively inhibit SARS-COV-2 infection in Vero E6 cells; in particular, compound 3 has an EC 50 of 0.2373 ⁇ M, and its activity is better than that of the positive control Remdesivir (EC 50 of 0.692 ⁇ M).
  • test compounds 60 male Sprague-Dawley (SD) rats, weighing 200-230 g, were randomly divided into 3 groups with 3 rats in each group.
  • the series of test compounds were administered by gavage (p.o.), intravenous (i.v.) and intraperitoneal (i.p.), respectively, according to the protocol in Table 6 below. They were fasted for 12 h before the experiment and had free access to water. 2h after the administration of unified food.
  • Gavage, intravenous and intraperitoneal administration solutions were formulated in DMSO/HS15/NaCl (5/3/92, v/v/v).
  • Administer the drug according to the dosage shown in Table 6, record the administration time, and collect blood through the jugular vein at the time set above or other suitable methods. Each sample is collected about 0.20mL, heparin sodium is anticoagulated, and placed on ice after collection. superior. Plasma was centrifuged within 1 hour (centrifugation conditions: 6800g, 6 minutes, 2-8°C). Plasma samples were stored in a -80°C freezer prior to analysis. The grouping and blood collection time points are shown in Table 6, with 3 animals at each time point.
  • the oral exposure of compound 26 was 842 h*ng/mL, and the bioavailability was 7.2%.
  • the oral exposure of compound 39 was 14586 h*ng/mL, and the bioavailability was 14.7%.
  • the oral exposure of compound 40 was 2888h*ng/mL, and the bioavailability was 22.1%.
  • the oral exposure of compound 43 was 258 h*ng/mL, and the bioavailability was 4.8%.
  • the oral exposure of compound 44 was 381 h*ng/mL and the bioavailability was 4.1%.
  • the oral exposure of compound 45 was 968 h*ng/mL, and the bioavailability was 5.1%.
  • ACE2 Humanized angiotensin-converting enzyme 2
  • mice (age: 8-10 weeks) were purchased from Jiangsu Jicui Yaokang Biotechnology Co., Ltd. (#T037659. Compounds were dissolved in 5% (v/v) DMSO ( Sigma-Aldrich), 3% (v/v) HS15 (GLPBIO) and 92% saline. SARS-CoV-2 (stain107) intranasal infection and administration were performed according to the experimental protocol in Table 9. All mice were observed and Body weights were monitored daily until sacrificed.
  • lung tissue was fixed with 4% paraformaldehyde for at least 7 days, embedded in paraffin and cut into 3 ⁇ m sections. Sections were stained with hematoxylin and eosin (H&E) and analyzed by light microscopy. Lung injury was assessed according to histological features (thickening of alveolar septa, hemorrhage, inflammatory cell infiltration, etc.).
  • a specific embodiment of a representative inflammatory cytokine and chemokine assay in the lung is: using the PrimeScript TM RT kit (Takara), RNA extracted from the lungs was reverse transcribed into cDNA and then analyzed by Ex Taq TM II (TliRNaseH Plus) (Takara) and ViiA TM quantified gene expression. Primer sequences used to quantify inflammatory gene expression are shown in Table 10.
  • a specific embodiment for the determination of inflammatory cells (neutrophils and macrophages) in the lungs is performed by fixing mouse lung tissue in 4% paraformaldehyde for at least 7 days, then paraffin-embedding according to standard procedures. Cut into 4 ⁇ m sections.
  • rat monoclonal antibody F4/80 Humanabio, 1:100
  • rabbit polyclonal antibody Ly6G Servicebio, 1:300
  • HRP horseradish peroxidase
  • TSA tyramide signal amplification
  • the above experiments used a placebo as a control.
  • the placebo is a formulation in the same dosage form as the test drug, but without the active pharmaceutical ingredient.
  • the experimental results show that the compounds of the present invention can effectively resist SARS-COV-2 infection in vivo in transgenic mice.
  • the present invention provides a novel coronavirus main protease inhibitor represented by formula I and a preparation method and application thereof.
  • the compound represented by formula I can effectively inhibit the activity of SARS-CoV-2M pro , and can be used to prepare a SARS-CoV-2M pro inhibitor to block the replication and transcription of SARS-CoV-2 virus in patients.
  • the compounds of the present invention have very good application prospects in the preparation of SARS-CoV-2 M pro inhibitors, anti-SARS-CoV-2 drugs, and drugs for preventing and/or treating novel coronavirus pneumonia.

Landscapes

  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Public Health (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Veterinary Medicine (AREA)
  • General Health & Medical Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Animal Behavior & Ethology (AREA)
  • Epidemiology (AREA)
  • Virology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • General Chemical & Material Sciences (AREA)
  • Molecular Biology (AREA)
  • Oncology (AREA)
  • Communicable Diseases (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Indole Compounds (AREA)

Abstract

Disclosed are a novel coronavirus main protease inhibitor, and a preparation method therefor and the use thereof. Specifically provided are a compound represented by formula (I), a pharmaceutically acceptable salt, a stereoisomer, an optical isomer, or an isotopically substituted form thereof. The compound can effectively inhibit the activity of SARS-CoV-2 M pro, can be used to prepare a SARS-CoV-2 M pro inhibitor, and block the replication and transcription of SARS-CoV-2 viruses in a patient. The compound has very good application prospects in the preparation of a SARS-CoV-2 M pro inhibitor, an anti-SARS-CoV-2 drug, and a drug for preventing and/or treating novel coronavirus pneumonia.

Description

一种新型冠状病毒主蛋白酶的抑制剂及其制备方法和用途A kind of inhibitor of novel coronavirus main protease and preparation method and use thereof 技术领域technical field
本发明属于有机合成药物技术领域,具体涉及一种新型冠状病毒主蛋白酶的抑制剂及其制备方法和制药用途。The invention belongs to the technical field of organic synthetic medicines, and in particular relates to an inhibitor of novel coronavirus main protease, a preparation method and pharmaceutical use thereof.
背景技术Background technique
由严重急性呼吸综合征冠状病毒2型(SARS-CoV-2,又称新型冠状病毒)引起的2019年冠状病毒肺炎(COVID-19,又称新型冠状病毒肺炎)大流行是一个全球性的卫生紧急事件。尽管临床上已经使用了α-干扰素和抗HIV药物洛匹那韦/利托那韦
Figure PCTCN2021076400-appb-000001
的组合,但疗效仍然非常有限,并且可能会有毒副作用。吉列德科学公司(Gilead Sciences,Inc.)开发的广谱抗病毒药物瑞德西韦也在探索治疗COVID-19,但需要更多的数据来证明其疗效。因此,当前仍旧迫切需要开发安全有效的抗SARS-CoV-2药物。
The 2019 coronavirus pneumonia (COVID-19, also known as novel coronavirus pneumonia) pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2, also known as the new coronavirus) is a global health emergency. Although alpha-interferon and anti-HIV drugs lopinavir/ritonavir have been used clinically
Figure PCTCN2021076400-appb-000001
combination, but still has very limited efficacy and may have toxic side effects. Remdesivir, a broad-spectrum antiviral drug developed by Gilead Sciences, Inc., is also being explored to treat COVID-19, but more data is needed to prove its efficacy. Therefore, there is still an urgent need to develop safe and effective anti-SARS-CoV-2 drugs.
冠状病毒的基因组RNA长约30knt,具有5′帽结构和3′-poly-a尾,至少含有6个开放阅读框(ORF)。第一个ORF(ORF1a/b)约占基因组长度的三分之二,直接翻译两种多蛋白:pp1a和pp1ab,ORF1a和ORF1b之间存在a-1移码。这些多蛋白由一种主蛋白酶(简称M pro;也被称为3C样蛋白酶(3CL pro))和一个或两个木瓜蛋白酶样蛋白酶(PLPs)加工而成,转化为16种非结构蛋白。这些非结构蛋白参与亚基因组RNA的生产,编码四种主要结构蛋白(包膜(E)、膜(M)、棘突(S)和核衣壳(N)蛋白质)和其他辅助蛋白质,以完成病毒的复制和侵入过程。 The genomic RNA of coronavirus is about 30knt long, has a 5' cap structure and a 3'-poly-a tail, and contains at least 6 open reading frames (ORFs). The first ORF (ORF1a/b) occupies approximately two-thirds of the genome length and directly translates two polyproteins: pp1a and pp1ab, with an a-1 frameshift between ORF1a and ORF1b. These polyproteins are processed by a major protease ( Mpro for short; also known as 3C-like protease ( 3CLpro )) and one or two papain-like proteases (PLPs) into 16 nonstructural proteins. These nonstructural proteins are involved in the production of subgenomic RNAs, encoding the four major structural proteins (envelope (E), membrane (M), spine (S), and nucleocapsid (N) proteins) and other auxiliary proteins to complete the Virus replication and invasion process.
M pro将重叠的pp1a和pp1ab多聚蛋白水解裂解为功能蛋白,这是病毒复制过程中的关键步骤。对于RdRp或nsp13等病毒复制必需的酶,如果没有事先的蛋白水解释放,就不能完全发挥作用完成复制。因此,抑制病毒的M pro可以阻止传染性病毒颗粒的产生,从而减轻疾病症状。 M pro proteolytically cleaves overlapping pp1a and pp1ab polysomes into functional proteins, a critical step in viral replication. Enzymes necessary for viral replication such as RdRp or nsp13 cannot fully function to complete replication without prior proteolytic release. Thus, virus-suppressing M pro can prevent the production of infectious virus particles, thereby reducing disease symptoms.
M pro在冠状病毒中是保守的,并且不同冠状病毒中M pro的底物具有一些共同的特征:从N端到C端的氨基酸以配对的形式进行编号(-P4-P3-P2-P1↓P1′-P2′-P3′),裂解位点在P1和P1′之间。特别地,M pro在P1位点(Leu-Gln↓(Ser,Ala,Gly))对谷氨酰胺有独特的底物偏好,这一点在宿主蛋白酶中是不存在的,这表明通过靶向病毒M pro实现高选择性是可行的。因此,病毒对这种蛋白酶的正确功能的绝对依赖性,加上缺乏同源的人类蛋白酶,使得M pro成为理想的抗病毒靶点。 M pro is conserved among coronaviruses, and the substrates of M pro in different coronaviruses have some common features: amino acids from N-terminal to C-terminal are numbered in a paired form (-P4-P3-P2-P1↓P1 '-P2'-P3'), the cleavage site is between P1 and P1'. In particular, Mpro has a unique substrate preference for glutamine at the P1 site (Leu-Gln↓(Ser, Ala, Gly)), which is absent in host proteases, suggesting that by targeting the virus It is feasible to achieve high selectivity with M pro . Thus, the absolute dependence of the virus on the correct function of this protease, coupled with the lack of a homologous human protease, makes Mpro an ideal antiviral target.
因此,亟需研究出一种能够有效抑制SARS-CoV-2病毒的M pro活 性的药物。 Therefore, there is an urgent need to develop a drug that can effectively inhibit the M pro activity of SARS-CoV-2 virus.
发明内容SUMMARY OF THE INVENTION
本发明的目的是提供新型冠状病毒主蛋白酶的抑制剂及其制备方法和制药用途。The purpose of the present invention is to provide the inhibitor of novel coronavirus main protease and its preparation method and pharmaceutical use.
本发明提供了式I所示化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式:The present invention provides the compound shown in formula I, or its pharmaceutically acceptable salt, or its stereoisomer, or its optical isomer, or its isotopic substitution form:
Figure PCTCN2021076400-appb-000002
Figure PCTCN2021076400-appb-000002
其中,X为O或S;Wherein, X is O or S;
A环选自未取代或被一个或多个R 6取代的以下基团:5~6元饱和杂环基、5~6元不饱和杂环基、饱和杂稠环基、不饱和杂稠环基;R 6各自独立的选自C 1~6烷基、C 1~6烷氧基、卤素、羟基、氰基、氨基、羧基; Ring A is selected from the following groups unsubstituted or substituted by one or more R 6 : 5-6 membered saturated heterocyclyl, 5-6 membered unsaturated heterocyclyl, saturated heterofused ring, unsaturated heterofused ring group; R 6 is independently selected from C 1-6 alkyl, C 1-6 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
R 3为L 3M 0L 4R 3a;其中L 3选自无、C 1~4亚烷基、卤代C 1~4亚烷基、C 2~4亚烯基、卤代C 2~4亚烯基,L 4选自无、C 1~4亚烷基、卤代C 1~4亚烷基,M 0选自无、O、S、NH、CO、CONH、NHCO,R 3a为未取代或被一个或多个R 3b取代的以下基团:5~6元芳基、5~6元杂芳基、不饱和杂稠环基、不饱和稠环烷基;R 3b各自独立的选自被R 3c取代或未取代的C 1~5烷基、被R 3c取代或未取代的C 1~5烷氧基、卤素、被R 3c取代或未取代的苯基、NR 14R 15、被R 3c取代或未取代的萘基、羟基;R 14、R 15各自独立的选自氢或C 1~5烷基,R 3c各自独立的选自卤素、氘、氰基、羟基、氨基、羧基; R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-4 alkenylene, halogenated C 2- 4 alkenylene, L 4 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is The following groups are unsubstituted or substituted by one or more R 3b : 5-6 membered aryl, 5-6 membered heteroaryl, unsaturated heterofused ring group, unsaturated fused ring alkyl; R 3b are each independently Selected from C 1-5 alkyl substituted or unsubstituted by R 3c , C 1-5 alkoxy substituted or unsubstituted by R 3c , halogen, phenyl substituted or unsubstituted by R 3c , NR 14 R 15 , substituted or unsubstituted naphthyl and hydroxyl by R 3c ; R 14 and R 15 are each independently selected from hydrogen or C 1-5 alkyl, and R 3c is independently selected from halogen, deuterium, cyano, hydroxyl, amino ,carboxyl;
R 4选自未取代或被一个或多个取代基取代的以下基团:5~6元芳基、5~6元杂芳基、C 1~5烷基、COOR 10;所述取代基各自独立的选自=O、羟基、硝基、氨基、羧基、卤素、C 1~5烷基;R 10为C 1~5烷基; R 4 is selected from the following groups unsubstituted or substituted by one or more substituents: 5-6 membered aryl, 5-6 membered heteroaryl, C 1-5 alkyl, COOR 10 ; the substituents are each independently selected from =O, hydroxyl, nitro, amino, carboxyl, halogen, C 1-5 alkyl; R 10 is C 1-5 alkyl;
R 5选自COR 8或WCOOR 7;其中,R 8选自氢或
Figure PCTCN2021076400-appb-000003
W选自无、C 1~4亚烷基、C 2~4亚烯基、C 2~4亚炔基,R 7选自C 1~6烷基;M选自无、CO、NH、CONH、NHCO、COO或OCO,L 0选自无、C 1~4亚烷基、C 2~4亚烯基,L 1选自无、C 1~4亚烷基、C 2~4亚烯基,R 8a选自C 1~5烷基、卤代的C 1~5烷基、3~6元饱和环烷基、3~6元饱和杂环基、5~6元芳基或5~6元杂芳基。
R 5 is selected from COR 8 or WCOOR 7 ; wherein, R 8 is selected from hydrogen or
Figure PCTCN2021076400-appb-000003
W is selected from none, C 1-4 alkylene, C 2-4 alkenylene, C 2-4 alkynylene, R 7 is selected from C 1-6 alkyl; M is selected from none, CO, NH, CONH , NHCO, COO or OCO, L 0 is selected from none, C 1-4 alkylene, C 2-4 alkenylene, L 1 is selected from none, C 1-4 alkylene, C 2-4 alkenylene , R 8a is selected from C 1-5 alkyl, halogenated C 1-5 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, 5-6 membered aryl or 5-6 membered aryl Yuan Heteroaryl.
进一步地,所述化合物的结构如式II、式III或式IV所示:Further, the structure of the compound is shown in formula II, formula III or formula IV:
Figure PCTCN2021076400-appb-000004
Figure PCTCN2021076400-appb-000004
其中,X为O或S;Wherein, X is O or S;
n选自0~3的整数,优选为0~2的整数;n is selected from an integer of 0-3, preferably an integer of 0-2;
R 1、R 2各自独立的选自氢、C 1~5烷基、C 1~5烷氧基、卤素、羟基、氰基、氨基、羧基; R 1 and R 2 are each independently selected from hydrogen, C 1-5 alkyl, C 1-5 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
R 3为L 3M 0L 4R 3a;其中L 3选自无、C 1~4亚烷基、卤代C 1~4亚烷基、C 2~3亚烯基,L 4选自无、C 1~4亚烷基、卤代C 1~4亚烷基,M 0选自无、O、S、NH、CO、CONH、NHCO,R 3a为未取代或被一个或多个R 3b取代的以下基团:苯基、
Figure PCTCN2021076400-appb-000005
Figure PCTCN2021076400-appb-000006
R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-3 alkenylene, and L 4 is selected from none , C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is unsubstituted or by one or more R 3b Substituted the following groups: phenyl,
Figure PCTCN2021076400-appb-000005
Figure PCTCN2021076400-appb-000006
R 3b各自独立的选自C 1~4烷基、卤素取代的C 1~4烷基、氘代的C 1~4烷基、氰基取代的C 1~4烷基、C 1~4烷氧基、卤素取代的C 1~4烷氧基、氘代的C 1~4烷氧基、氰基取代的C 1~4烷氧基、卤素、苯基、卤代的苯基、 NR 14R 15
Figure PCTCN2021076400-appb-000007
羟基,R 14、R 15各自独立的选自氢或C 1~4烷基;
R 3b are each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkyl Oxyl, halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR 14 R 15 ,
Figure PCTCN2021076400-appb-000007
Hydroxyl, R 14 and R 15 are each independently selected from hydrogen or C 1-4 alkyl;
R 4选自未取代或被一个或多个取代基取代的以下基团:5~6元芳基、5~6元杂芳基、C 1~5烷基、COOR 10;所述取代基各自独立的选自=O、羟基、硝基、氨基、羧基、卤素、C 1~5烷基;R 10为C 1~5烷基; R 4 is selected from the following groups unsubstituted or substituted by one or more substituents: 5-6 membered aryl, 5-6 membered heteroaryl, C 1-5 alkyl, COOR 10 ; the substituents are each independently selected from =O, hydroxyl, nitro, amino, carboxyl, halogen, C 1-5 alkyl; R 10 is C 1-5 alkyl;
R 8选自氢或
Figure PCTCN2021076400-appb-000008
M选自无、CO、NH、CONH、NHCO、COO或OCO,L 0选自无、C 1~3亚烷基、C 2~4亚烯基,L 1选自无、C 1~3亚烷基、C 2~4亚烯基,R 8a选自C 1~4烷基、卤代的C 1~4烷基、3~6元饱和环烷基、3~6元饱和杂环基、5~6元芳基或5~6元杂芳基。
R 8 is selected from hydrogen or
Figure PCTCN2021076400-appb-000008
M is selected from None, CO, NH, CONH, NHCO, COO or OCO, L 0 is selected from None, C 1-3 alkylene, C 2-4 alkenylene, L 1 is selected from None, C 1-3 alkylene Alkyl, C 2-4 alkenylene, R 8a is selected from C 1-4 alkyl, halogenated C 1-4 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, A 5- to 6-membered aryl group or a 5- to 6-membered heteroaryl group.
进一步地,R 1、R 2各自独立的选自氢、C 1~4烷基、C 1~4烷氧基、卤素、羟基; Further, R 1 and R 2 are each independently selected from hydrogen, C 1-4 alkyl, C 1-4 alkoxy, halogen, and hydroxyl;
R 3选自
Figure PCTCN2021076400-appb-000009
Figure PCTCN2021076400-appb-000010
L 3M 0L 4R 3a;L 3选自无、C 1~3亚烷基、卤代C 1~3亚烷基、C 2~3亚烯基,L 4选自无、C 1~3亚烷基、卤代C 1~3亚烷基、,M 0选自无、O、NH、CO、CONH,R 3a为苯基、被一个或多个R 3b取代的苯基,R 3b各自独立的选自C 1~4烷基、卤素取代的C 1~4烷基、氘代的C 1~4烷基、氰基取代的C 1~4烷基、C 1~4烷氧基、卤素取代的C 1~4烷氧基、氘代的C 1~4烷氧基、氰基取代的C 1~4烷氧基、卤素、苯基、卤代的苯基、NR 14R 15
Figure PCTCN2021076400-appb-000011
羟基,R 14、R 15各自独立的选自氢或C 1~3烷基;
R 3 is selected from
Figure PCTCN2021076400-appb-000009
Figure PCTCN2021076400-appb-000010
L 3 M 0 L 4 R 3a ; L 3 is selected from none, C 1-3 alkylene, halogenated C 1-3 alkylene, C 2-3 alkenylene, L 4 is selected from none, C 1-3 3 alkylene, halogenated C 1-3 alkylene, M 0 is selected from none, O, NH, CO, CONH, R 3a is phenyl, phenyl substituted by one or more R 3b , R 3b Each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkoxy , halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR 14 R 15 ,
Figure PCTCN2021076400-appb-000011
Hydroxyl, R 14 and R 15 are each independently selected from hydrogen or C 1-3 alkyl;
R 4选自
Figure PCTCN2021076400-appb-000012
C 1~2烷基、COOR 10、取代或未取代的苯基;所述取代基选自羟基、硝基;R a1、R a2各自独立的选自氢、C 1~3烷基、卤素;R 10为C 1~3烷基;
R 4 is selected from
Figure PCTCN2021076400-appb-000012
C 1-2 alkyl, COOR 10 , substituted or unsubstituted phenyl; the substituent is selected from hydroxyl, nitro; R a1 and R a2 are independently selected from hydrogen, C 1-3 alkyl, halogen; R 10 is C 1-3 alkyl;
R 8选自氢、CONHR 11、L 2COOR 12、C 1~4烷基、卤代的C 1~4烷基; R 11选自3~6元饱和环烷基、C 1~4烷基、苄基、
Figure PCTCN2021076400-appb-000013
L 2为C 1~2亚烷基、C 2~3亚烯基,R 12为C 1~3烷基。
R 8 is selected from hydrogen, CONHR 11 , L 2 COOR 12 , C 1-4 alkyl, halogenated C 1-4 alkyl; R 11 is selected from 3-6 membered saturated cycloalkyl, C 1-4 alkyl , benzyl,
Figure PCTCN2021076400-appb-000013
L 2 is a C 1-2 alkylene group, a C 2-3 alkenylene group, and R 12 is a C 1-3 alkyl group.
进一步地,所述式II如式II-1或式II-2所示:Further, described formula II is shown as formula II-1 or formula II-2:
Figure PCTCN2021076400-appb-000014
Figure PCTCN2021076400-appb-000014
其中,X为O或S,优选为O;Wherein, X is O or S, preferably O;
R 1、R 2各自独立的选自氢、C 1~3烷基,优选为甲基; R 1 and R 2 are each independently selected from hydrogen, C 1-3 alkyl, preferably methyl;
m选自0~3的整数,R 3b各自独立的选自苯基、卤代的苯基、卤素、C 1~3烷基、卤代或氘代的C 1~3烷基、C 1~3烷氧基、卤代或氘代的C 1~3烷氧基、羟基; m is selected from an integer from 0 to 3, and R 3b is independently selected from phenyl, halogenated phenyl, halogen, C 1-3 alkyl, halogenated or deuterated C 1-3 alkyl, C 1- 3 alkoxy, halogenated or deuterated C 1-3 alkoxy, hydroxyl;
R a1、R a2各自独立的选自氢、C 1~3烷基、卤素; R a1 and R a2 are independently selected from hydrogen, C 1-3 alkyl, and halogen;
R b选自氢、C 1~3烷基、卤代的C 1~3烷基; R b is selected from hydrogen, C 1-3 alkyl, halogenated C 1-3 alkyl;
L 3选自无、C 1~2亚烷基、卤代C 1~2亚烷基、C 2亚烯基,L 4选自无、C 1~3亚烷基、卤代C 1~3亚烷基,M 0选自无、O、NH、CO、CONH; L 3 is selected from none, C 1-2 alkylene, halogenated C 1-2 alkylene, C 2 alkenylene, L 4 is selected from none, C 1-3 alkylene, halogenated C 1-3 Alkylene, M 0 is selected from none, O, NH, CO, CONH;
所述卤素优选为氯、氟。The halogen is preferably chlorine or fluorine.
进一步地,所述化合物的结构为以下结构之一:Further, the structure of the compound is one of the following structures:
Figure PCTCN2021076400-appb-000015
Figure PCTCN2021076400-appb-000015
Figure PCTCN2021076400-appb-000016
Figure PCTCN2021076400-appb-000016
Figure PCTCN2021076400-appb-000017
Figure PCTCN2021076400-appb-000017
Figure PCTCN2021076400-appb-000018
Figure PCTCN2021076400-appb-000018
Figure PCTCN2021076400-appb-000019
Figure PCTCN2021076400-appb-000019
Figure PCTCN2021076400-appb-000020
Figure PCTCN2021076400-appb-000020
本发明还提供了一种药物组合物,所述药物组合物是以上述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式为活性成分,加上药学上可接受的辅料制成的制剂。The present invention also provides a pharmaceutical composition, wherein the pharmaceutical composition is the above compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substitution form thereof. Active ingredient, plus pharmaceutically acceptable excipients.
本发明还提供了上述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备冠状病毒蛋白水解酶抑制剂中的用途;优选的,所述冠状病毒蛋白水解酶为冠状病毒主蛋白酶;更优选的,所述冠状病毒蛋白水解酶为SARS-COV-2M proThe present invention also provides the use of the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substituted form thereof, in the preparation of a coronavirus proteolytic enzyme inhibitor; preferably Preferably, the coronavirus proteolytic enzyme is a coronavirus main protease; more preferably, the coronavirus proteolytic enzyme is SARS-COV-2M pro .
本发明还提供了上述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备抗冠状病毒的药物中的用途,优选的,所述冠状病毒为新型冠状病毒SARS-CoV-2。The present invention also provides the use of the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substituted form thereof, in the preparation of an anti-coronavirus drug, preferably, The coronavirus is a novel coronavirus SARS-CoV-2.
本发明还提供了上述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备预防和/或治疗与SARS-COV-2M pro相关的疾病的药物中的用途,优选的,所述与SARS-COV-2M pro相关的疾病为新型冠状病毒肺炎COVID-19。 The present invention also provides the above-mentioned compound, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof, or an isotopic substituted form thereof in the preparation of prevention and/or treatment of SARS-COV-2M pro Use in medicines for related diseases, preferably, the disease related to SARS-COV-2M pro is novel coronavirus pneumonia COVID-19.
进一步地,所述冠状病毒蛋白水解酶抑制剂、抗冠状病毒的药物或预防和/或治疗病毒性肺炎的药物能够抑制SARS-COV-2M pro的活性和/或能够抑制SARS-COV-2感染细胞。 Further, the medicine of described coronavirus proteolytic enzyme inhibitor, anti-coronavirus or the medicine of prevention and/or treatment of viral pneumonia can suppress the activity of SARS-COV-2M pro and/or can suppress SARS-COV-2 infection cell.
关于本发明的使用术语的定义:除非另有说明,本文中基团或者术语提供的初始定义适用于整篇说明书的该基团或者术语;对于本文没有具体定义的术语,应该根据公开内容和上下文,给出本领域技术人员能够给予它们的含义。Definitions of terms used in the present invention: Unless otherwise specified, the initial definitions of groups or terms provided herein apply to the groups or terms throughout the specification; for terms that are not specifically defined herein, they should be based on the disclosure and context. , give their meanings that those skilled in the art can give them.
碳氢基团中碳原子含量的最小值和最大值通过前缀表示,例如,前缀C a~b烷基表示任何含“a”至“b”个碳原子的烷基。例如,C 1~6烷基是指包含1~6个碳原子的直链或支链的烷基。 Minimum and maximum carbon content in a hydrocarbon group are indicated by prefixes, eg, the prefix C a-b alkyl denotes any alkyl group containing "a" to "b" carbon atoms. For example, C 1-6 alkyl refers to a straight or branched chain alkyl group containing 1 to 6 carbon atoms.
本文“取代”是指分子中的1个、2个或多个氢原子被其它不同的原子或分子所替换,包括该分子中同位原子或异位原子上的1个、2个或多个取代。"Substituted" herein refers to the replacement of 1, 2 or more hydrogen atoms in a molecule by a different atom or molecule, including 1, 2 or more substitutions on isotopic or isotopic atoms in the molecule .
“同位素替代形式”指化合物中的一个或两个以上的原子被其对应的同位素替换后得到的化合物,比如化合物中的氢被替换为氕、氘或氚。"Isotopic substitution form" refers to a compound obtained by replacing one or more than two atoms in a compound with its corresponding isotope, for example, hydrogen in the compound is replaced by protium, deuterium or tritium.
“药学上可接受的”是指某载体、运载物、稀释剂、辅料,和/或所形成的盐通常在化学上或物理上与构成某药物剂型的其它成分相兼容,并在生理上与受体相兼容。"Pharmaceutically acceptable" means that a carrier, vehicle, diluent, adjuvant, and/or salt formed is generally chemically or physically compatible with the other ingredients that make up a pharmaceutical dosage form and physiologically compatible with receptor compatible.
“盐”是将化合物或其立体异构体,与无机和/或有机酸和/或碱形成的酸式和/或碱式盐,也包括两性离子盐(内盐),还包括季铵盐,例如烷基铵盐。这些盐可以是在化合物的最后分离和纯化中直接得到。也可以是通过将化合物,或其立体异构体,与一定数量的酸或碱适当(例如等当量)进行混合而得到。这些盐可能在溶液中 形成沉淀而以过滤方法收集,或在溶剂蒸发后回收而得到,或在水介质中反应后冷冻干燥制得。"Salt" is an acid and/or base salt of a compound or its stereoisomer with inorganic and/or organic acids and/or bases, including zwitterionic salts (inner salts), and quaternary ammonium salts , such as alkylammonium salts. These salts can be obtained directly in the final isolation and purification of the compounds. It can also be obtained by mixing a compound, or a stereoisomer thereof, with a certain amount of acid or base as appropriate (eg, equivalent). These salts may form a precipitate in solution and be collected by filtration, or recovered after evaporation of the solvent, or obtained by lyophilization after reaction in an aqueous medium.
“药学上可接受的盐”可以是化合物的盐酸盐、硫酸盐、枸橼酸盐、苯磺酸盐、氢溴酸盐、氢氟酸盐、磷酸盐、乙酸盐、丙酸盐、丁二酸盐、草酸盐、苹果酸盐、琥珀酸盐、富马酸盐、马来酸盐、酒石酸盐或三氟乙酸盐。"Pharmaceutically acceptable salts" may be hydrochloride, sulfate, citrate, benzenesulfonate, hydrobromide, hydrofluoride, phosphate, acetate, propionate, Succinate, oxalate, malate, succinate, fumarate, maleate, tartrate or trifluoroacetate.
卤素为氟、氯、溴或碘。Halogen is fluorine, chlorine, bromine or iodine.
“芳基”指具有共轭的π电子体系的全碳单环或稠合多环(也就是共享毗邻碳原子对的环)基团,例如苯基。所述芳基不含有杂原子,如氮,氧,或硫,同时连接母体的点必须在具有共轭的π电子体系的环上的碳原子上。芳基可以是取代的或未取代的。“5~6元芳基”指环碳原子数为5或6的芳基。"Aryl" refers to an all-carbon monocyclic or fused polycyclic (ie, rings sharing adjacent pairs of carbon atoms) groups having a conjugated pi-electron system, such as phenyl. The aryl group contains no heteroatoms, such as nitrogen, oxygen, or sulfur, while the point of attachment to the parent must be on a carbon atom on the ring with a conjugated pi-electron system. Aryl groups can be substituted or unsubstituted. The "5- to 6-membered aryl group" refers to an aryl group having 5 or 6 ring carbon atoms.
“杂芳基”指包含一个到多个杂原子的杂芳族基团。这里所指的杂原子包括氧、硫和氮。例如呋喃基、噻吩基、吡啶基、吡唑基等。所述杂芳基可以是任选取代的或未取代的。“5~6元杂芳基”指环原子数为5或6的杂芳基。"Heteroaryl" refers to a heteroaromatic group containing one to more heteroatoms. The heteroatoms referred to herein include oxygen, sulfur and nitrogen. For example, furanyl, thienyl, pyridyl, pyrazolyl and the like. The heteroaryl group can be optionally substituted or unsubstituted. The "5- to 6-membered heteroaryl group" refers to a heteroaryl group having 5 or 6 ring atoms.
“环烷基”指饱和或不饱和的环状烃取代基;环状烃可以是单环也可以是多环。例如,“3~6元饱和环烷基”指环碳原子数为3~6的饱和的环烷基。"Cycloalkyl" refers to a saturated or unsaturated cyclic hydrocarbon substituent; the cyclic hydrocarbon may be monocyclic or polycyclic. For example, "a 3- to 6-membered saturated cycloalkyl group" refers to a saturated cycloalkyl group having 3 to 6 ring carbon atoms.
“杂环基”指饱和或不饱和的环状烃取代基;环状烃可以是单环也可以是多环,且携带至少一个环杂原子(包括但不限于O、S或N)。例如,“3~6元饱和杂环基”指环原子数为3~6的饱和的杂环基。"Heterocyclyl" refers to a saturated or unsaturated cyclic hydrocarbon substituent; cyclic hydrocarbons may be monocyclic or polycyclic and carry at least one ring heteroatom (including but not limited to O, S or N). For example, the "3- to 6-membered saturated heterocyclic group" refers to a saturated heterocyclic group having 3 to 6 ring atoms.
“稠环烷基”指多环的环烷基,且该多环的环烷基中有两个环共用两个相邻的碳原子。"Fused cycloalkyl" refers to a polycyclic cycloalkyl in which two rings share two adjacent carbon atoms.
“杂稠环基”指多环的杂环基,其中至少含有1个杂原子,且该多环的杂环基中有两个环共用两个相邻的碳原子或杂原子。"Hetero-fused ring group" refers to a polycyclic heterocyclic group, which contains at least one heteroatom, and two rings in the polycyclic heterocyclic group share two adjacent carbon atoms or heteroatoms.
“亚烷基”指烷基失去一个原子后的基团。例如C 1亚烷基:
Figure PCTCN2021076400-appb-000021
C 2亚烷基:
Figure PCTCN2021076400-appb-000022
"Alkylene" refers to a group in which an alkyl group has lost one atom. For example C 1 alkylene:
Figure PCTCN2021076400-appb-000021
C 2 alkylene:
Figure PCTCN2021076400-appb-000022
“亚烯基”指烯基失去一个原子后的基团。例如C 2烯基:
Figure PCTCN2021076400-appb-000023
"Alkenylene" refers to a group in which an alkenyl group has lost one atom. For example C 2 alkenyl:
Figure PCTCN2021076400-appb-000023
“亚炔基”指炔基失去一个原子后的基团。例如C 2炔基:
Figure PCTCN2021076400-appb-000024
"Alkynylene" refers to a group in which an alkynyl group has lost one atom. For example C 2 alkynyl:
Figure PCTCN2021076400-appb-000024
实验结果表明,本发明提供了一种能够有效抑制新型冠状病毒主蛋白酶M pro活性的化合物,该化合物能够有效抑制SARS-COV-2病毒在细胞内的复制,抑制细胞中的SARS-COV-2感染,抵抗转基 因小鼠的体内SARS-COV-2感染;降低SARS-COV-2感染的转基因小鼠肺部的病毒载量,降低小鼠肺部趋化因子配体10(CXCL10)和β型干扰素(IFN-β)的基因表达水平,降低小鼠肺部的中性粒细胞(NEU)和巨噬细胞(MAC)的数量,改善小鼠肺部的病理损伤。同时,本发明提供的化合物还具有良好的体内安全性和药代动力学性质。本发明的化合物在制备SARS-CoV-2M pro抑制剂,抗SARS-CoV-2的药物,以及预防和/或治疗新型冠状病毒肺炎的药物中具有非常好的应用前景。 The experimental results show that the present invention provides a compound that can effectively inhibit the activity of the new coronavirus main protease M pro , the compound can effectively inhibit the replication of SARS-COV-2 virus in cells, and inhibit the SARS-COV-2 virus in cells. Infection, resists in vivo SARS-COV-2 infection in transgenic mice; reduces viral load in the lungs of SARS-COV-2-infected transgenic mice, and reduces lung chemokine ligand 10 (CXCL10) and beta-type in mice The gene expression level of interferon (IFN-β) reduces the number of neutrophils (NEU) and macrophages (MAC) in the lungs of mice, and improves the pathological damage of the lungs of mice. Meanwhile, the compounds provided by the present invention also have good in vivo safety and pharmacokinetic properties. The compounds of the present invention have very good application prospects in the preparation of SARS-CoV-2 M pro inhibitors, anti-SARS-CoV-2 drugs, and drugs for preventing and/or treating novel coronavirus pneumonia.
显然,根据本发明的上述内容,按照本领域的普通技术知识和惯用手段,在不脱离本发明上述基本技术思想前提下,还可以做出其它多种形式的修改、替换或变更。Obviously, according to the above-mentioned content of the present invention, according to the common technical knowledge and conventional means in the field, without departing from the above-mentioned basic technical idea of the present invention, other various forms of modification, replacement or change can also be made.
以下通过实施例形式的具体实施方式,对本发明的上述内容再作进一步的详细说明。但不应将此理解为本发明上述主题的范围仅限于以下的实例。凡基于本发明上述内容所实现的技术均属于本发明的范围。The above content of the present invention will be further described in detail below through the specific implementation in the form of examples. However, this should not be construed as limiting the scope of the above-mentioned subject matter of the present invention to the following examples. All technologies implemented based on the above content of the present invention belong to the scope of the present invention.
附图说明Description of drawings
图1为化合物26对SARS-COV-2M pro的抑制活性曲线。 Fig. 1 is the inhibitory activity curve of compound 26 to SARS-COV-2M pro .
图2为化合物33对SARS-COV-2M pro的抑制活性曲线。 Fig. 2 is the inhibitory activity curve of compound 33 on SARS-COV-2M pro .
图3为化合物37对SARS-COV-2M pro的抑制活性曲线。 Figure 3 is the inhibitory activity curve of compound 37 against SARS-COV-2M pro .
图4化合物对SARS-COV-2在人肺泡上皮细胞中复制的抑制实验。Figure 4. Inhibition experiments of compounds on the replication of SARS-COV-2 in human alveolar epithelial cells.
图5 SARS-CoV-2感染小鼠的肺部病毒载量。Figure 5 Pulmonary viral load in SARS-CoV-2-infected mice.
图6 SARS-CoV-2感染小鼠的肺部病理组织切片(3dpi)。Figure 6 Lung histopathological sections (3dpi) of SARS-CoV-2-infected mice.
图7 SARS-CoV-2感染小鼠的肺部代表性细胞因子表达水平(3dpi)。Figure 7. Representative cytokine expression levels (3dpi) in the lungs of SARS-CoV-2-infected mice.
图8 SARS-CoV-2感染小鼠的肺部中性粒细胞和巨噬细胞计数(3dpi)。Figure 8 Pulmonary neutrophil and macrophage counts (3 dpi) in SARS-CoV-2-infected mice.
具体实施方式detailed description
本发明所用原料与设备均为已知产品,通过购买市售产品所得。The raw materials and equipment used in the present invention are all known products, obtained by purchasing commercially available products.
实施例1:化合物1的制备Example 1: Preparation of Compound 1
Figure PCTCN2021076400-appb-000025
Figure PCTCN2021076400-appb-000025
按照上述制备路线制得本发明的化合物1,路线中各步骤的反应条件如下:The compound 1 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、a,2-氟丙二酸二甲酯,苄醇,甲苯,对甲苯磺酸,110℃;b,异丙醇,正己烷,-10℃;i, a, dimethyl 2-fluoromalonate, benzyl alcohol, toluene, p-toluenesulfonic acid, 110°C; b, isopropanol, n-hexane, -10°C;
ii、异丙醇,氢氧化钠,水,45℃;ii, isopropanol, sodium hydroxide, water, 45 ℃;
iii、无水四氢呋喃,异丙基氯化镁四氢呋喃溶液,Ar,0℃;iii. Anhydrous tetrahydrofuran, isopropylmagnesium chloride tetrahydrofuran solution, Ar, 0°C;
iv、无水四氢呋喃,N,N'-羰基二咪唑,Ar,0℃;iv. Anhydrous tetrahydrofuran, N,N'-carbonyldiimidazole, Ar, 0°C;
v、乙酸乙酯,10%钯碳,氢气,室温;v, ethyl acetate, 10% palladium carbon, hydrogen, room temperature;
vi、二氯甲烷,盐酸二氧六环溶液;vi, dichloromethane, hydrochloric acid dioxane solution;
vii、二氯甲烷,N,N,N′,N′-四甲基-O-(7-氮杂苯并三唑-1-基)六氟磷酸脲,N,N-二异丙基乙胺,-20℃;vii, dichloromethane, N,N,N',N'-tetramethyl-O-(7-azabenzotriazol-1-yl)hexafluorophosphate urea, N,N-diisopropylethyl Amine, -20°C;
viii、二氯甲烷,三氟乙酸;viii, dichloromethane, trifluoroacetic acid;
ix、二氯甲烷,N,N,N′,N′-四甲基-O-(7-氮杂苯并三唑-1-基)六氟磷酸脲,N,N-二异丙基乙胺,-20℃;ix, dichloromethane, N,N,N',N'-tetramethyl-O-(7-azabenzotriazol-1-yl)hexafluorophosphate urea, N,N-diisopropylethyl Amine, -20°C;
以下为具体合成步骤:The following are the specific synthesis steps:
中间体2:2-氟丙二酸二苄酯的制备Intermediate 2: Preparation of dibenzyl 2-fluoromalonate
2-氟丙二酸二甲酯(10g,66.6mmol,1.0eq)和苄醇(35mL,338.2mmol,5.0eq)用100mL甲苯溶解,加入1.15g对甲苯磺酸(6.7mmol,0.1eq),回流反应,TLC监控反应,约8小时后反应完毕。冷却至室温,减压蒸去甲苯,加入15mL异丙醇,搅拌均匀,搅拌下慢慢加入30mL正己烷,置于-10℃冷阱中继续搅拌2小时,析出大量白色固体。抽滤,滤饼用10mL×2冷冻正己烷洗涤两次,滤饼30℃真空减压干燥得18.4g产品,收率91.4%。 1H NMR(400MHz,DMSO-d6)δ7.64–6.91(m,10H),6.00(d,J=46.3Hz,1H),5.30–5.20(m,4H). Dimethyl 2-fluoromalonate (10g, 66.6mmol, 1.0eq) and benzyl alcohol (35mL, 338.2mmol, 5.0eq) were dissolved in 100mL of toluene, 1.15g of p-toluenesulfonic acid (6.7mmol, 0.1eq) was added, The reaction was refluxed, monitored by TLC, and the reaction was completed after about 8 hours. Cool to room temperature, evaporate toluene under reduced pressure, add 15 mL of isopropanol, stir evenly, slowly add 30 mL of n-hexane with stirring, place in a -10°C cold trap and continue stirring for 2 hours, a large amount of white solids are precipitated. After suction filtration, the filter cake was washed twice with 10 mL×2 frozen n-hexane, and the filter cake was dried under vacuum at 30° C. to obtain 18.4 g of product with a yield of 91.4%. 1 H NMR (400MHz, DMSO-d6)δ7.64-6.91(m,10H),6.00(d,J=46.3Hz,1H),5.30-5.20(m,4H).
中间体3:2-氟丙二酸单苄酯的制备Intermediate 3: Preparation of monobenzyl 2-fluoromalonate
2-氟丙二酸二苄酯(18.4g,60.9mmol,1.0eq)用100mL异丙醇溶解,升温至45℃,氢氧化钠(2.55g,63.9mmol,1.05eq)溶于60mL水后慢慢滴入,滴加时间>1小时。滴加完毕后继续反应30分钟,减压蒸去异丙醇,加入50mL水,用饱和碳酸氢钠溶液调节pH值至9左右。水相用二氯甲烷20mL×2二氯甲烷萃取两次,用6mol/L盐酸调节水相pH值至1-2,用40mL×3异丙醚萃取三次,合并有机相,用30mL饱和盐水洗涤一次。有机相加入无水硫酸镁干燥,过滤,浓缩得粘稠状残留物,加入60mL正己烷搅拌过夜,析出白色固体,过滤,滤饼40℃真空减压干燥得6.5g产品,收率50.3%. 1H NMR(400MHz,Chloroform-d)δ7.41–7.32(m,5H),5.87(s,2H),5.39(d,J=47.9Hz,1H),5.31(s,1H). Dibenzyl 2-fluoromalonate (18.4g, 60.9mmol, 1.0eq) was dissolved in 100mL of isopropanol, the temperature was raised to 45°C, sodium hydroxide (2.55g, 63.9mmol, 1.05eq) was dissolved in 60mL of water and then slowly Slowly drip, dripping time > 1 hour. After the dropwise addition, the reaction was continued for 30 minutes, the isopropanol was evaporated under reduced pressure, 50 mL of water was added, and the pH value was adjusted to about 9 with saturated sodium bicarbonate solution. The aqueous phase was extracted twice with dichloromethane 20mL×2 dichloromethane, the pH value of the aqueous phase was adjusted to 1-2 with 6mol/L hydrochloric acid, extracted three times with 40mL×3 isopropyl ether, the organic phases were combined and washed with 30mL saturated brine once. The organic phase was dried by adding anhydrous magnesium sulfate, filtered, and concentrated to obtain a viscous residue, which was added with 60 mL of n-hexane and stirred overnight. A white solid was precipitated, filtered, and the filter cake was dried under vacuum at 40 °C to obtain 6.5 g of the product with a yield of 50.3%. 1 H NMR (400MHz, Chloroform-d) δ7.41-7.32(m, 5H), 5.87(s, 2H), 5.39(d, J=47.9Hz, 1H), 5.31(s, 1H).
中间体4的制备Preparation of Intermediate 4
2-氟丙二酸单苄酯溶于无水四氢呋喃(2mL/mmol),氩气置换保护,冷却至0℃,慢慢滴加异丙基氯化镁四氢呋喃溶液(2M四氢呋喃溶液,2.0eq),得白色悬浊液。0℃下继续搅拌1小时,产品悬浊液直接用于下步反应。Monobenzyl 2-fluoromalonate was dissolved in anhydrous tetrahydrofuran (2 mL/mmol), protected by argon replacement, cooled to 0 °C, and isopropylmagnesium chloride tetrahydrofuran solution (2M tetrahydrofuran solution, 2.0eq) was slowly added dropwise to obtain White suspension. Stirring was continued for 1 hour at 0°C, and the product suspension was directly used for the next reaction.
中间体6:1-苄基6-甲基(4S)-4-(((叔丁氧羰基)氨基)-2-氟-3-氧代己二酸酯的制备Intermediate 6: Preparation of 1-benzyl 6-methyl(4S)-4-(((tert-butoxycarbonyl)amino)-2-fluoro-3-oxoadipate
Boc-L-天冬氨酸4-甲酯(2.2g,8.8mmol,1.0eq)溶于50mL无水四氢呋喃,氩气置换保护,冷却至0℃,加入CDI(1.5g,9.3mmol,1.05eq),保温反应1小时。反应液冷却至-20℃,慢慢加入1.5eq中间体4,保温反应1小时后升温至室温反应6小时。冰水浴下将反应液慢慢倒入300mL 2M稀盐酸中,用100mL×3乙酸乙酯萃取三次,合并有机相,用饱和碳酸氢钠溶液洗涤至弱碱性,再用50mL饱和盐水洗涤一次后加入无水硫酸镁干燥,过滤,浓缩,所得粗品直接用于下步反应。Boc-L-aspartate 4-methyl ester (2.2g, 8.8mmol, 1.0eq) was dissolved in 50mL of anhydrous tetrahydrofuran, protected by argon replacement, cooled to 0°C, added CDI (1.5g, 9.3mmol, 1.05eq) ) and incubated for 1 hour. The reaction solution was cooled to -20°C, 1.5 eq of intermediate 4 was slowly added, and the reaction was incubated for 1 hour, and then the temperature was raised to room temperature for 6 hours. The reaction solution was slowly poured into 300 mL of 2M dilute hydrochloric acid under an ice-water bath, extracted three times with 100 mL × 3 ethyl acetate, the organic phases were combined, washed with saturated sodium bicarbonate solution until weakly alkaline, and washed once with 50 mL of saturated brine. Anhydrous magnesium sulfate was added to dry, filtered and concentrated, and the obtained crude product was directly used in the next reaction.
中间体7:(S)-3-(((叔丁氧羰基)氨基)甲基-5-氟-4-氧戊酸甲酯的制备Intermediate 7: Preparation of (S)-methyl 3-(((tert-butoxycarbonyl)amino)methyl-5-fluoro-4-oxopentanoate
上步所得中间体6粗品加入50mL乙酸乙酯,加入200mg 10%钯碳,氢气置换,氢气下室温反应过夜,过滤,浓缩,所得粗品用石油醚:乙酸乙酯=10:1流动相柱层析得1.5g无色油状物,收率65%。 1H NMR(400MHz,Chloroform-d)δ5.51(d,J=8.0Hz,1H),5.28–5.06(m,2H),4.73–4.52(m,1H),3.70(s,3H),3.08(dd,J=17.2,4.6Hz,1H),2.84(dd,J=17.2,5.0Hz,1H),1.46(s,9H). Add 50 mL of ethyl acetate to the crude intermediate 6 obtained in the previous step, add 200 mg of 10% palladium on carbon, replace with hydrogen, react at room temperature overnight under hydrogen, filter and concentrate, and use petroleum ether: ethyl acetate = 10:1 mobile phase column layer for the crude product obtained 1.5g of colorless oily substance was obtained by precipitation, and the yield was 65%. 1 H NMR (400MHz, Chloroform-d)δ5.51(d,J=8.0Hz,1H),5.28-5.06(m,2H),4.73-4.52(m,1H),3.70(s,3H),3.08 (dd, J=17.2, 4.6Hz, 1H), 2.84 (dd, J=17.2, 5.0Hz, 1H), 1.46 (s, 9H).
中间体8:(S)-3-氨基-5-氟-4-氧戊酸甲酯的制备Intermediate 8: Preparation of (S)-methyl 3-amino-5-fluoro-4-oxopentanoate
500mg中间体7加入5mL二氯甲烷溶解,然后加入5mL盐酸二氧六环,反应完全后旋干,得中间体8,收率为91.2%。 1H NMR(400MHz,Chloroform-d)δ5.25-5.10(m,2H),4.53(dd,J=8.7,1.0Hz,2H),4.44(d,J=7.9Hz,1H),3.69(s,3H),2.83–2.71(m,2H). 500 mg of intermediate 7 was dissolved in 5 mL of dichloromethane, and then 5 mL of dioxane hydrochloride was added. After the reaction was completed, the mixture was spin-dried to obtain intermediate 8 with a yield of 91.2%. 1 H NMR (400MHz, Chloroform-d) δ5.25-5.10(m, 2H), 4.53(dd, J=8.7, 1.0Hz, 2H), 4.44(d, J=7.9Hz, 1H), 3.69(s ,3H),2.83–2.71(m,2H).
中间体11:甲基(1H-吲哚-2-羰基)-L-脯氨酸的制备Intermediate 11: Preparation of methyl(1H-indole-2-carbonyl)-L-proline
1H-吲哚-2-羧酸(1g,6.21mmol,1.0eq)用二氯甲烷溶解后,于-20℃加入HATU(2.81g,7.40mmol,1.2eq)后加入L-脯氨酸甲酯盐酸盐(1.03g,6.21mmol,1.0eq),最后加入DIEA(3mL,18.51mmol,3.0eq),TLC监控反应。反应完毕后,用水溶液和DCM进行萃取,有机层浓缩后经柱层析分离得到中间体11(1.53g),收率为75.2%。 1H NMR(400MHz,DMSO-d 6)δ7.68(dt,J=7.4,1.5Hz,1H),7.43(dd,J=7.4,1.6Hz,1H),7.26(td,J=7.5,1.7Hz,1H),7.19–7.14(m,2H),4.31(t,J=7.0Hz,1H),3.72(td,J=7.1,2.3Hz,2H),3.68(s,3H),2.11–2.00(m,2H),1.93–1.81(m,2H)。 1H-Indole-2-carboxylic acid (1g, 6.21mmol, 1.0eq) was dissolved in dichloromethane, then HATU (2.81g, 7.40mmol, 1.2eq) was added at -20°C and L-proline methyl ester was added The hydrochloride salt (1.03 g, 6.21 mmol, 1.0 eq), finally DIEA (3 mL, 18.51 mmol, 3.0 eq) was added and the reaction was monitored by TLC. After completion of the reaction, extraction was performed with aqueous solution and DCM, and the organic layer was concentrated and separated by column chromatography to obtain Intermediate 11 (1.53 g) with a yield of 75.2%. 1 H NMR (400 MHz, DMSO-d 6 ) δ 7.68 (dt, J=7.4, 1.5 Hz, 1H), 7.43 (dd, J=7.4, 1.6 Hz, 1H), 7.26 (td, J=7.5, 1.7 Hz, 1H), 7.19–7.14 (m, 2H), 4.31 (t, J=7.0Hz, 1H), 3.72 (td, J=7.1, 2.3Hz, 2H), 3.68 (s, 3H), 2.11–2.00 (m, 2H), 1.93–1.81 (m, 2H).
中间体12:(1H-吲哚-2-羰基)-L-脯氨酸的制备Intermediate 12: Preparation of (1H-indole-2-carbonyl)-L-proline
500mg中间体11加入10mL二氯甲烷溶解,然后加入5mL三 氟乙酸,反应完全后旋干,得378mg中间体12,直接作为先一步反应。收率为91.2%。500 mg of intermediate 11 was dissolved in 10 mL of dichloromethane, then 5 mL of trifluoroacetic acid was added, and after the reaction was completed, it was spin-dried to obtain 378 mg of intermediate 12, which was directly used as the first step reaction. The yield was 91.2%.
化合物1:甲基(S)-3-((S)-1-(1H-吲哚-2-羰基)吡咯烷-2-甲酰胺)-5-氟-4-氧代戊酸的制备Compound 1: Preparation of methyl (S)-3-((S)-1-(1H-indole-2-carbonyl)pyrrolidine-2-carboxamide)-5-fluoro-4-oxopentanoic acid
中间体12(168mg,0.61mmol,1.0eq)用二氯甲烷溶解后,于-20℃加入HATU(280mg,0.73mmol,1.2eq)后加入中间体8(100mg,0.61mmol,1.0eq),最后加入DIEA(301μL,1.83mmol,3.0eq),TLC监控反应。反应完毕后,用水溶液和DCM进行萃取,浓缩有机层,柱层析分离得到化合物1,收率为34%。 1H NMR(400MHz,DMSO)δ11.55(s,1H),8.69(s,1H),7.65(d,J=7.6Hz,1H),7.46(d,J=8.3Hz,1H),7.20(m,1H),7.06(d,J=7.8Hz,2H),5.26(m,2H),4.60(m,1H),4.49(m,1H),3.96(dd,J=15.0,7.4Hz,2H),3.61(s,3H),2.86(m,1H),2.60(dd,J=15.9,7.7Hz,1H),2.02(m,2H),1.82(m,2H).HRMS m/z(ESI)calcd for C 20H 25FN 4O 5[M+H] +403.1543found:404.1476。 Intermediate 12 (168mg, 0.61mmol, 1.0eq) was dissolved in dichloromethane, HATU (280mg, 0.73mmol, 1.2eq) was added at -20°C, followed by intermediate 8 (100mg, 0.61mmol, 1.0eq), and finally DIEA (301 μL, 1.83 mmol, 3.0 eq) was added and the reaction was monitored by TLC. After the completion of the reaction, extraction was performed with aqueous solution and DCM, the organic layer was concentrated, and the compound 1 was obtained by column chromatography with a yield of 34%. 1 H NMR(400MHz, DMSO)δ11.55(s,1H),8.69(s,1H),7.65(d,J=7.6Hz,1H),7.46(d,J=8.3Hz,1H),7.20( m,1H),7.06(d,J=7.8Hz,2H),5.26(m,2H),4.60(m,1H),4.49(m,1H),3.96(dd,J=15.0,7.4Hz,2H ),3.61(s,3H),2.86(m,1H),2.60(dd,J=15.9,7.7Hz,1H),2.02(m,2H),1.82(m,2H).HRMS m/z(ESI )calcd for C 20 H 25 FN 4 O 5 [M+H] + 403.1543 found:404.1476.
实施例2:化合物3的制备Example 2: Preparation of Compound 3
Figure PCTCN2021076400-appb-000026
Figure PCTCN2021076400-appb-000026
按照上述制备路线制得本发明的化合物3,路线中各步骤的反应条件如下:The compound 3 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、Boc-L-谷氨酸二甲酯,LiHMDS四氢呋喃溶液,氩气,无水四氢呋喃,-78℃,;i. Boc-L-dimethyl glutamate, LiHMDS tetrahydrofuran solution, argon, anhydrous tetrahydrofuran, -78°C,;
ii、(2S,4R)-二甲基2-(叔-丁氧基羰基氨基)-4-(氰基甲基)戊二酸酯,无水甲醇,六水氯化钴,硼氢化钠;ii, (2S,4R)-dimethyl 2-(tert-butoxycarbonylamino)-4-(cyanomethyl)glutarate, anhydrous methanol, cobalt chloride hexahydrate, sodium borohydride;
iii、(S)-甲基2-(叔-丁氧基羰基氨基)-3-((S)-2-羰基吡咯烷-3-基)丙酸酯,一水合氢氧化锂,四氢呋喃,0℃;iii, (S)-methyl 2-(tert-butoxycarbonylamino)-3-((S)-2-carbonylpyrrolidin-3-yl)propionate, lithium hydroxide monohydrate, tetrahydrofuran, 0 °C;
iv、无水四氢呋喃,Ar,N,N'-羰基二咪唑,0℃;iv. Anhydrous tetrahydrofuran, Ar, N,N'-carbonyldiimidazole, 0°C;
v、乙酸乙酯,10%钯碳,氢气,室温;v, ethyl acetate, 10% palladium carbon, hydrogen, room temperature;
vi、二氯甲烷,盐酸二氧六环溶液;vi, dichloromethane, hydrochloric acid dioxane solution;
vii、二氯甲烷,N,N,N′,N′-四甲基-O-(7-氮杂苯并三唑-1-基)六氟 磷酸脲,N,N-二异丙基乙胺,-20℃;vii, dichloromethane, N,N,N',N'-tetramethyl-O-(7-azabenzotriazol-1-yl)hexafluorophosphate urea, N,N-diisopropylethyl Amine, -20°C;
viii、二氯甲烷,三氟乙酸;viii, dichloromethane, trifluoroacetic acid;
ix、二氯甲烷,N,N,N′,N′-四甲基-O-(7-氮杂苯并三唑-1-基)六氟磷酸脲,N,N-二异丙基乙胺,-20℃;ix, dichloromethane, N,N,N',N'-tetramethyl-O-(7-azabenzotriazol-1-yl)hexafluorophosphate urea, N,N-diisopropylethyl Amine, -20°C;
以下为具体合成步骤:The following are the specific synthesis steps:
中间体14:(2S,4R)-2-((叔丁氧羰基)氨基)-4-(氰基甲基)戊二酸二甲酯的制备Intermediate 14: Preparation of (2S,4R)-2-((tert-butoxycarbonyl)amino)-4-(cyanomethyl)glutaric acid dimethyl ester
Boc-L-谷氨酸二甲酯(12g,43.6mmol,1.0eq)溶于100mL无水四氢呋喃,氩气置换保护,冷却至-78℃,慢慢滴加94mL LiHMDS四氢呋喃溶液(1M四氢呋喃溶液,94mmol,2.2eq),滴加完毕后保温反应1小时。3.24mL溴乙腈(46.6mmol,1.1eq)慢慢滴加入反应液,保温反应6小时后用50mL饱和氯化铵溶液淬灭反应。将淬灭后的反应液升温至室温,用60mL×3乙酸乙酯萃取三次,合并有机相,用50mL饱和盐水洗涤后加入无水硫酸镁干燥,过滤,浓缩,所得粗品用石油醚:乙酸乙酯=4:1流动相柱层析得9.36g浅黄色油状物,收率68.3%。 1H NMR(400MHz,Chloroform-d)δ5.11(d,J=8.6Hz,1H),4.39(s,1H),3.77(s,3H),3.76(s,3H),2.90–2.82(m,1H),2.82–2.74(m,2H),2.28–2.06(m,2H),1.45(s,9H). Boc-L-dimethyl glutamate (12 g, 43.6 mmol, 1.0 eq) was dissolved in 100 mL of anhydrous tetrahydrofuran, protected by argon replacement, cooled to -78°C, and slowly added dropwise 94 mL of LiHMDS tetrahydrofuran solution (1M tetrahydrofuran solution, 94mmol, 2.2eq), the reaction was incubated for 1 hour after the dropwise addition. 3.24 mL of bromoacetonitrile (46.6 mmol, 1.1 eq) was slowly added dropwise to the reaction solution, and the reaction was incubated for 6 hours and then quenched with 50 mL of saturated ammonium chloride solution. The quenched reaction solution was warmed to room temperature, extracted three times with 60 mL × 3 ethyl acetate, the organic phases were combined, washed with 50 mL of saturated brine, dried over anhydrous magnesium sulfate, filtered, and concentrated, the obtained crude product was mixed with petroleum ether:ethyl acetate Ester=4:1 mobile phase column chromatography to obtain 9.36 g of pale yellow oil, yield 68.3%. 1 H NMR (400MHz, Chloroform-d) δ5.11(d, J=8.6Hz, 1H), 4.39(s, 1H), 3.77(s, 3H), 3.76(s, 3H), 2.90-2.82(m ,1H),2.82–2.74(m,2H),2.28–2.06(m,2H),1.45(s,9H).
中间体15:(S)-2-(((叔丁氧羰基)氨基)甲基-3-((S)-2-氧吡咯烷-3-基)丙酸甲酯的制备Intermediate 15: Preparation of (S)-methyl 2-(((tert-butoxycarbonyl)amino)methyl-3-((S)-2-oxopyrrolidin-3-yl)propanoate
(2S,4R)-二甲基2-(叔-丁氧基羰基氨基)-4-(氰基甲基)戊二酸酯(9.36g,29.8mmol,1.0eq)溶于150mL无水甲醇,冷却至0℃。加入六水氯化钴(4.25g,18mmol,0.6eq),再分批加入硼氢化钠(6.76g,180mmol,6.0eq),加完后升温至室温,反应过夜,TLC监控反应完毕。加入50mL饱和氯化铵溶液淬灭反应,减压蒸去甲醇,用100mL×3乙酸乙酯萃取三次,合并有机相,依次用200mL×3饱和氯化铵溶液洗涤三次、200mL×3饱和盐水洗涤三次,有机相加入无水硫酸镁干燥,过滤,浓缩,所得粗品用石油醚:乙酸乙酯=1:1流动相柱层析得3.94g白色固体,收率46.2%。 1H NMR(400MHz,Chloroform-d)δ5.92(s,1H),5.49(d,J=8.4Hz,1H),4.41–4.26(m,1H),3.74(s,3H),3.45–3.26(m,2H),2.58–2.39(m,2H),2.27–2.07(m,1H),1.98–1.78(m,2H),1.44(s,9H). (2S,4R)-dimethyl 2-(tert-butoxycarbonylamino)-4-(cyanomethyl)glutarate (9.36 g, 29.8 mmol, 1.0 eq) was dissolved in 150 mL of anhydrous methanol, Cool to 0°C. Cobalt chloride hexahydrate (4.25 g, 18 mmol, 0.6 eq) was added, and sodium borohydride (6.76 g, 180 mmol, 6.0 eq) was added in batches. After the addition, the temperature was raised to room temperature, and the reaction was performed overnight. TLC monitored the completion of the reaction. 50 mL of saturated ammonium chloride solution was added to quench the reaction, methanol was evaporated under reduced pressure, extracted three times with 100 mL × 3 ethyl acetate, the organic phases were combined, washed three times with 200 mL × 3 saturated ammonium chloride solution, and 200 mL × 3 saturated brine successively Three times, the organic phase was dried by adding anhydrous magnesium sulfate, filtered and concentrated to obtain 3.94 g of white solid with a mobile phase column chromatography of petroleum ether:ethyl acetate=1:1 for the crude product obtained, with a yield of 46.2%. 1 H NMR (400MHz, Chloroform-d) δ5.92(s, 1H), 5.49(d, J=8.4Hz, 1H), 4.41-4.26(m, 1H), 3.74(s, 3H), 3.45-3.26 (m, 2H), 2.58–2.39 (m, 2H), 2.27–2.07 (m, 1H), 1.98–1.78 (m, 2H), 1.44 (s, 9H).
中间体16:(S)-2-((叔丁氧羰基)氨基)-3-((S)-2-氧吡咯烷-3-基)丙酸的制备Intermediate 16: Preparation of (S)-2-((tert-butoxycarbonyl)amino)-3-((S)-2-oxopyrrolidin-3-yl)propionic acid
(S)-甲基2-(叔-丁氧基羰基氨基)-3-((S)-2-羰基吡咯烷-3-基)丙酸酯(0.88g,3.1mmol,1.0eq)溶于10mL四氢呋喃,冷却至0℃。一水合氢氧化锂(0.64g,15.4mmol,5.0eq)溶于10mL水后慢慢滴入,滴完后保温反应4小时,TLC监控反应完毕。饱和柠檬酸水溶 液调节pH值至中性,减压蒸去四氢呋喃,10mL乙酸乙酯萃取一次,水相用饱和柠檬酸水溶液调节pH值至3-4,20mL×3乙酸乙酯萃取三次,合并有机相,用20mL饱和盐水洗涤后加入无水硫酸镁干燥,过滤,浓缩得0.78g类白色固体,收率93.2%。 1H NMR(400MHz,Chloroform-d)δ7.19(s,1H),5.69(d,J=7.9Hz,1H),4.35(q,J=7.6Hz,1H),3.48–3.31(m,2H),2.70–2.55(m,1H),2.51–2.36(m,1H),2.27–2.12(m,1H),1.99–1.80(m,2H),1.44(s,9H). (S)-Methyl 2-(tert-butoxycarbonylamino)-3-((S)-2-carbonylpyrrolidin-3-yl)propanoate (0.88 g, 3.1 mmol, 1.0 eq) was dissolved in 10 mL of tetrahydrofuran, cooled to 0 °C. Lithium hydroxide monohydrate (0.64 g, 15.4 mmol, 5.0 eq) was dissolved in 10 mL of water and slowly added dropwise. After dropping, the reaction was incubated for 4 hours, and the reaction was monitored by TLC. The pH value of saturated citric acid aqueous solution was adjusted to neutral, the tetrahydrofuran was evaporated under reduced pressure, extracted once with 10 mL of ethyl acetate, the aqueous phase was adjusted to pH 3-4 with saturated aqueous citric acid solution, extracted three times with 20 mL × 3 ethyl acetate, and the organic The phase was washed with 20 mL of saturated brine, dried over anhydrous magnesium sulfate, filtered, and concentrated to obtain 0.78 g of an off-white solid with a yield of 93.2%. 1 H NMR (400MHz, Chloroform-d)δ7.19(s,1H),5.69(d,J=7.9Hz,1H),4.35(q,J=7.6Hz,1H),3.48-3.31(m,2H) ), 2.70–2.55 (m, 1H), 2.51–2.36 (m, 1H), 2.27–2.12 (m, 1H), 1.99–1.80 (m, 2H), 1.44 (s, 9H).
中间体17:(4S)-4-((叔丁氧羰基)氨基)-2-氟-3-氧代-5-((S)-2-氧吡咯烷-3-基)戊酸苄酯的制备Intermediate 17: Benzyl (4S)-4-((tert-butoxycarbonyl)amino)-2-fluoro-3-oxo-5-((S)-2-oxopyrrolidin-3-yl)pentanoate preparation
(S)-2-((叔-丁氧基羰基)氨基)-3-((S)-2-羰基吡咯烷-3-基)丙酸(2.4g,8.8mmol,1.0eq)溶于50mL无水四氢呋喃,氩气置换保护,冷却至0℃,加入CDI(1.5g,9.3mmol,1.05eq),保温反应1小时。反应液冷却至-20℃,慢慢加入1.5eq中间体4,保温反应1小时后升温至室温反应6小时。冰水浴下将反应液慢慢倒入300mL 2M稀盐酸中,用100mL×3乙酸乙酯萃取三次,合并有机相,用饱和碳酸氢钠溶液洗涤至弱碱性,再用50mL饱和盐水洗涤一次后加入无水硫酸镁干燥,过滤,浓缩,所得粗品直接用于下步反应。(S)-2-((tert-butoxycarbonyl)amino)-3-((S)-2-carbonylpyrrolidin-3-yl)propanoic acid (2.4 g, 8.8 mmol, 1.0 eq) was dissolved in 50 mL Anhydrous tetrahydrofuran, argon replacement protection, cooled to 0 °C, CDI (1.5 g, 9.3 mmol, 1.05 eq) was added, and the reaction was maintained for 1 hour. The reaction solution was cooled to -20°C, 1.5 eq of intermediate 4 was slowly added, and the reaction was incubated for 1 hour, and then the temperature was raised to room temperature for 6 hours. The reaction solution was slowly poured into 300 mL of 2M dilute hydrochloric acid under an ice-water bath, extracted three times with 100 mL × 3 ethyl acetate, the organic phases were combined, washed with saturated sodium bicarbonate solution until weakly alkaline, and washed once with 50 mL of saturated brine. Anhydrous magnesium sulfate was added to dry, filtered and concentrated, and the obtained crude product was directly used in the next reaction.
中间体18:((S)-4-氟-3-氧代-1-((S)-2-氧吡咯烷-3-基)丁烷-2-基)氨基甲酸叔丁酯的制备Intermediate 18: Preparation of tert-butyl ((S)-4-fluoro-3-oxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)carbamate
上步所得中间体17粗品加入50mL乙酸乙酯,加入200mg10%钯碳,氢气置换,氢气下室温反应过夜,过滤,浓缩,所得粗品用石油醚:乙酸乙酯=1:1流动相柱层析得1.3g白色固体,收率50%。 1H NMR(400MHz,Chloroform-d)δ5.99(d,J=7.5Hz,1H),5.91(s,1H),5.31–4.95(m,2H),4.56(s,1H),3.42–3.32(m,2H),2.56–2.42(m,2H),2.10–1.97(m,1H),1.96–1.81(m,2H),1.45(s,9H). The crude intermediate 17 obtained in the previous step was added with 50 mL of ethyl acetate, added with 200 mg of 10% palladium carbon, replaced with hydrogen, reacted at room temperature overnight under hydrogen, filtered, and concentrated. 1.3 g of white solid were obtained, with a yield of 50%. 1 H NMR (400MHz, Chloroform-d) δ5.99(d, J=7.5Hz, 1H), 5.91(s, 1H), 5.31-4.95(m, 2H), 4.56(s, 1H), 3.42-3.32 (m, 2H), 2.56–2.42 (m, 2H), 2.10–1.97 (m, 1H), 1.96–1.81 (m, 2H), 1.45 (s, 9H).
中间体19:(S)-3-((S)-2-氨基-4-氟-3-氧丁基)吡咯烷-2-酮的制备Intermediate 19: Preparation of (S)-3-((S)-2-amino-4-fluoro-3-oxobutyl)pyrrolidin-2-one
500mg中间体18加入5mL二氯甲烷溶解,然后加入5mL盐酸二氧六环,反应完全后旋干,得中间体19,收率为85%。500 mg of intermediate 18 was dissolved in 5 mL of dichloromethane, and then 5 mL of dioxane hydrochloride was added. After the reaction was completed, the mixture was spin-dried to obtain intermediate 19 with a yield of 85%.
中间体22:乙基(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-羧酸酯的制备.Intermediate 22: Preparation of ethyl(1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylate .
将2,4-二氯苯氧乙酸(中间体21,0.58g,2.62mmol),2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(1.2g,3.14mmol),N,N-二异丙基乙胺(1.3mL,7.86mmol),and(1S,3aR,6aS)-八氢环戊烯并[c]吡咯-1-羧酸乙酯盐酸盐(中间体20,0.58g,2.62mmol)溶于15mL超干N,N-二甲基甲酰胺中,反应在25℃氩气保护条件下反应12小时,d反应加入4倍体积水,用二氯甲烷萃取三次,合并有机相用饱和氯化铵溶液、饱和碳酸钠溶液洗涤,无水硫酸钠干燥后过 滤,硅胶拌样柱层析(石油醚/乙酸乙酯=1:1)得到中间体22(0.60g,59%)。 1H NMR(400MHz,MeOD)δ7.42(d,J=5.4Hz,1H),7.26–7.19(m,1H),6.97(d,J=8.9Hz,1H),4.80-7.72(m,2H),4.28(d,J=3.6Hz,1H),4.22–4.10(m,2H),3.87(d,J=10.6Hz,1H),3.63–3.48(m,1H),3.57(d,J=10.5Hz,2H),2.71–2.61(m,1H),2.08–1.84(m,1H),1.83–1.46(m,4H),1.31–1.17(m,3H).ESI-MS(m/z):386.02(M+H) +. 2,4-Dichlorophenoxyacetic acid (Intermediate 21, 0.58g, 2.62mmol), 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylureahexa Fluorophosphate (1.2 g, 3.14 mmol), N,N-diisopropylethylamine (1.3 mL, 7.86 mmol), and (1S,3aR,6aS)-octahydrocyclopenteno[c]pyrrole-1 - Ethyl carboxylate hydrochloride (Intermediate 20, 0.58 g, 2.62 mmol) was dissolved in 15 mL of ultra-dry N,N-dimethylformamide, and the reaction was carried out at 25 ° C under argon protection for 12 hours, d reaction 4 times the volume of water was added, extracted three times with dichloromethane, the combined organic phases were washed with saturated ammonium chloride solution and saturated sodium carbonate solution, dried over anhydrous sodium sulfate, filtered, and subjected to silica gel column chromatography (petroleum ether/ethyl acetate) = 1 : 1) to yield intermediate 22 (0.60 g, 59%). 1 H NMR (400MHz, MeOD) δ 7.42 (d, J=5.4Hz, 1H), 7.26-7.19 (m, 1H), 6.97 (d, J=8.9Hz, 1H), 4.80-7.72 (m, 2H) ), 4.28(d, J=3.6Hz, 1H), 4.22-4.10(m, 2H), 3.87(d, J=10.6Hz, 1H), 3.63-3.48(m, 1H), 3.57(d, J= 10.5Hz, 2H), 2.71–2.61 (m, 1H), 2.08–1.84 (m, 1H), 1.83–1.46 (m, 4H), 1.31–1.17 (m, 3H). ESI-MS (m/z) :386.02(M+H) + .
中间体23:(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-羧酸的制备Intermediate 23: Preparation of (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylic acid
将乙基(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-羧酸酯(中间体22,200mg,0.52mmol)溶于20mL甲醇中,然后加入2M氢氧化钠溶液(10mL),反应在25℃下搅拌4小时.TLC监控反应结束后,旋干甲醇,用盐酸调pH至弱酸性,二氯甲烷萃取三次,合并有机相无水硫酸钠干燥后选干得粗产品直接进行下一步反应。Ethyl (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylate (Intermediate 22, 200 mg, 0.52 mmol) was dissolved in 20 mL of methanol, then 2M sodium hydroxide solution (10 mL) was added, and the reaction was stirred at 25 ° C for 4 hours. After the reaction was monitored by TLC, the methanol was spin-dried, and the pH was adjusted to weakly acidic with hydrochloric acid. Methyl chloride was extracted three times, and the organic phases were combined and dried over anhydrous sodium sulfate, and then the crude product was selected and dried, and the crude product was directly carried out to the next step.
化合物3:(1S,3aR,6aS)-2-(2-(2,4-二氯)乙酰基)-N-((S)-4-氟-3-氧-1-((S)-2-羰基-3-基)丁烷-2-基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Compound 3: (1S,3aR,6aS)-2-(2-(2,4-dichloro)acetyl)-N-((S)-4-fluoro-3-oxo-1-((S)- Preparation of 2-carbonyl-3-yl)butan-2-yl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
中间体23(168mg,0.61mmol,1.0eq)用二氯甲烷溶解后,于-20℃加入HATU(280mg,0.73mmol,1.2eq)后加入中间体19(100mg,0.61mmol,1.0eq),最后加入DIEA(301μL,1.83mmol,3.0eq),TLC监控反应。反应完毕后,用水溶液和DCM进行萃取,有机层浓缩后经柱层析分离得到化合物3,收率为34%。 1H NMR(400MHz,DMSO)δ8.61(d,J=7.4Hz,2H),8.29(d,J=7.7Hz,1H),8.15(d,J=8.5Hz,1H),7.65(s,1H),7.56(d,J=7.0Hz,2H),7.41(td,J=11.1,6.0Hz,4H),6.75(dd,J=15.9,6.1Hz,1H),5.15(m,2H),4.39(s,1H),3.62(d,J=4.1Hz,2H),3.16(m,1H),3.11(m,2H),2.28(d,J=36.4Hz,1H),2.12(s,1H),1.96(m,1H),1.62(m,2H),1.50(dd,J=15.5,8.6Hz,2H),0.88(m,6H).HRMS m/z(ESI)calcd for C 23H 30FN 3O 4[M+H] +432.2293found:432.2291。 Intermediate 23 (168mg, 0.61mmol, 1.0eq) was dissolved in dichloromethane, HATU (280mg, 0.73mmol, 1.2eq) was added at -20°C, followed by intermediate 19 (100mg, 0.61mmol, 1.0eq), and finally DIEA (301 μL, 1.83 mmol, 3.0 eq) was added and the reaction was monitored by TLC. After the completion of the reaction, extraction was performed with aqueous solution and DCM, and the organic layer was concentrated and separated by column chromatography to obtain compound 3 with a yield of 34%. 1 H NMR(400MHz, DMSO)δ8.61(d,J=7.4Hz,2H),8.29(d,J=7.7Hz,1H),8.15(d,J=8.5Hz,1H),7.65(s, 1H), 7.56(d, J=7.0Hz, 2H), 7.41(td, J=11.1, 6.0Hz, 4H), 6.75(dd, J=15.9, 6.1Hz, 1H), 5.15(m, 2H), 4.39(s, 1H), 3.62(d, J=4.1Hz, 2H), 3.16(m, 1H), 3.11(m, 2H), 2.28(d, J=36.4Hz, 1H), 2.12(s, 1H) ),1.96(m,1H),1.62(m,2H),1.50(dd,J=15.5,8.6Hz,2H),0.88(m,6H).HRMS m/z(ESI)calcd for C 23 H 30 FN 3 O 4 [M+H] + 432.2293 found: 432.2291.
实施例3:制备化合物9Example 3: Preparation of Compound 9
Figure PCTCN2021076400-appb-000027
Figure PCTCN2021076400-appb-000027
按照上述制备路线制得本发明的化合物9,路线中各步骤的反应条件如下:The compound 9 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、1-羟基苯并三唑,1-(3-二甲氨基丙基)-3-乙基碳二亚胺盐酸盐,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,室温。i. 1-Hydroxybenzotriazole, 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, room temperature.
ii、氢氧化钠,甲醇,水,55度ii. Sodium hydroxide, methanol, water, 55 degrees
iii、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,0℃iii, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, 0°C
iv、硼氢化钠,甲醇,室温iv, sodium borohydride, methanol, room temperature
v、戴斯马丁氧化剂,超干二氯甲烷,室温v. Dess Martin oxidant, ultra-dry dichloromethane, room temperature
以下为具体合成步骤:The following are the specific synthesis steps:
中间体25:甲基(1R,2S,5S)-6,6-二甲基3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-羧酸的制备Intermediate 25: Methyl(1R,2S,5S)-6,6-dimethyl 3-(quinoline-2-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carboxylic acid preparation
将原料23(喹啉2-羧酸1.0g,11.6mmol)、1-羟基苯并三唑(2.03g,15.08mmoL)、1-(3-二甲氨基丙基)-3-乙基碳二亚胺盐酸盐(4.43g,23.3mmol),N,N-二甲基甲酰胺30mL置于圆底烧瓶常温搅拌0.5小时,加入N,N-二异丙基乙胺2.5mL,再加入0.59g中间体24,反应8h后,减压蒸馏除去溶剂,用二氯甲烷和氯化铵溶液、碳酸氢钠溶液进行萃取,水、饱和氯化钠溶液进行洗涤,最后用硫酸钠干燥,抽滤,将有机相柱层析得白色固体。收率为85%。 1H NMR(400MHz,DMSO)δ8.12–8.03(m,1H),8.00–7.90(m,2H),7.66–7.48(m,3H),4.54(s,1H),4.03(q,J=7.1Hz,1H),3.75(d,J=6.7Hz,3H),3.47(d,J=5.4Hz 1H),3.39(d,J=5.7Hz 1H),1.99(t,J=6.2Hz,1H),1.54(t,J=6.8Hz,1H),1.03(s,3H),0.97(s,3H).MS(ESI,正离子)m/z:325.04.87[M+H] +The raw material 23 (quinoline 2-carboxylic acid 1.0 g, 11.6 mmol), 1-hydroxybenzotriazole (2.03 g, 15.08 mmol), 1-(3-dimethylaminopropyl)-3-ethylcarbon two Imine hydrochloride (4.43g, 23.3mmol), 30mL of N,N-dimethylformamide was placed in a round-bottomed flask and stirred at room temperature for 0.5 hours, 2.5mL of N,N-diisopropylethylamine was added, and 0.59 mL of N,N-diisopropylethylamine was added. g Intermediate 24, after reacting for 8 hours, the solvent was distilled off under reduced pressure, extracted with dichloromethane, ammonium chloride solution and sodium bicarbonate solution, washed with water and saturated sodium chloride solution, finally dried with sodium sulfate, and filtered with suction. , and the organic phase was chromatographed to obtain a white solid. The yield was 85%. 1 H NMR(400MHz,DMSO)δ8.12-8.03(m,1H),8.00-7.90(m,2H),7.66-7.48(m,3H),4.54(s,1H),4.03(q,J= 7.1Hz, 1H), 3.75(d, J=6.7Hz, 3H), 3.47(d, J=5.4Hz 1H), 3.39(d, J=5.7Hz 1H), 1.99(t, J=6.2Hz, 1H) ), 1.54 (t, J=6.8 Hz, 1H), 1.03 (s, 3H), 0.97 (s, 3H). MS (ESI, positive ion) m/z: 325.04.87 [M+H] + .
中间体26:(1R,2S,5S)-6,6-二甲基3-(喹啉-2-羰基)-3-氮杂双环 [3.1.0]己烷-2-羧酸的制备Intermediate 26: Preparation of (1R,2S,5S)-6,6-dimethyl 3-(quinoline-2-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carboxylic acid
将中间体25溶于20mL四氢呋喃,缓慢加入10mL 2mol/L的氢氧化钠溶液,将反应液在逐渐升温至55度搅拌3小时后终止并冷却至常温,浓缩反应液,加水调pH为弱酸性,析出白色固体,抽滤的得中间体5,未经进一步纯化被用作下一步反应Intermediate 25 was dissolved in 20mL of tetrahydrofuran, slowly added 10mL of 2mol/L sodium hydroxide solution, the reaction solution was gradually warming up to 55 degrees after stirring for 3 hours and terminated and cooled to normal temperature, concentrated reaction solution, add water to adjust pH to be weakly acidic , a white solid was precipitated, and the intermediate 5 was obtained by suction filtration, which was used in the next step without further purification.
中间体28:甲基((1R,5S)-6,6-二甲基-3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-羰基)-L-苯基丙氨酸的制备Intermediate 28: Methyl((1R,5S)-6,6-dimethyl-3-(quinoline-2-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carbonyl)- Preparation of L-phenylalanine
将中间体26 1.0g、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯1.93g加入20mL N,N-二甲基甲酰胺中,0℃搅拌0.5小时,加入N,N-二异丙基乙胺2.0mL,再加入中间体27 0.89g,氩气保护0℃条件下反应12h后,加入4倍体积的水,用乙酸乙酯进行萃取三次。合并有机相,用氯化铵溶液、碳酸氢钠溶液进行萃取,水、饱和氯化钠溶液进行洗涤,最后用硫酸钠干燥,抽滤,将有机相柱层析得白色固体。收率为65%。 1H NMR(400MHz,DMSO)δ8.53(d,J=7.5Hz,1H),8.04(d,J=6.4Hz,1H),7.99(d,J=6.4Hz,1H),7.94(d,J=3.7Hz,1H),7.83(d,J=8.5Hz,1H),7.61–7.57(m,1H),7.33(dd,J=8.4,1.5Hz,1H),7.28(s,2H),7.23–7.18(m,1H),7.13(d,J=1.6Hz,1H),6.95(d,J=2.5Hz,1H),4.55–4.44(m,1H),3.95(d,J=5.2Hz,1H),3.81(t,J=11.3Hz,1H),3.61(s,3H),3.05(d,J=13.8,7.5Hz,1H),2.84(dd,J=13.8,5.6Hz,1H),2.82(d,J=5.6Hz,1H),1.42–1.37(m,1H),1.36–1.32(m,1H),0.96(s,3H),0.91(s,3H). 1.0 g of intermediate 26, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate 1.93g were added to 20mL of N,N-dimethylmethane In the amide, stir at 0°C for 0.5 hours, add 2.0 mL of N,N-diisopropylethylamine, and then add 0.89 g of intermediate 27, react under argon protection at 0°C for 12h, add 4 times the volume of water, and use Ethyl acetate was extracted three times. The organic phases were combined, extracted with ammonium chloride solution and sodium bicarbonate solution, washed with water and saturated sodium chloride solution, finally dried with sodium sulfate, suction filtered, and the organic phase was subjected to column chromatography to obtain a white solid. The yield was 65%. 1 H NMR (400MHz, DMSO) δ 8.53 (d, J=7.5Hz, 1H), 8.04 (d, J=6.4Hz, 1H), 7.99 (d, J=6.4Hz, 1H), 7.94 (d, J=3.7Hz, 1H), 7.83(d, J=8.5Hz, 1H), 7.61–7.57(m, 1H), 7.33(dd, J=8.4, 1.5Hz, 1H), 7.28(s, 2H), 7.23–7.18 (m, 1H), 7.13 (d, J=1.6Hz, 1H), 6.95 (d, J=2.5Hz, 1H), 4.55–4.44 (m, 1H), 3.95 (d, J=5.2Hz) ,1H),3.81(t,J=11.3Hz,1H),3.61(s,3H),3.05(d,J=13.8,7.5Hz,1H),2.84(dd,J=13.8,5.6Hz,1H) ,2.82(d,J=5.6Hz,1H),1.42-1.37(m,1H),1.36-1.32(m,1H),0.96(s,3H),0.91(s,3H).
中间体29:(1R,5S)-N-((S)-1-羟基-3-苯丙-2-基)-6,6-二甲基-3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-甲酰胺的制备Intermediate 29: (1R,5S)-N-((S)-1-hydroxy-3-phenylpropan-2-yl)-6,6-dimethyl-3-(quinoline-2-carbonyl)- Preparation of 3-azabicyclo[3.1.0]hexane-2-carboxamide
将中间体28(((1R,5S)-6,6-二甲基-3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-羰基)-L-苯基丙氨酸)500mg,溶于30mL干燥甲醇中,常温条件下加入硼氢化钠,搅拌3小时后,加水淬灭,旋干甲醇,用乙酸乙酯萃取水相(50mL×3),收集有机相用硫酸钠进行干燥,抽滤后旋干有机相是为中间体29,产率80%。The intermediate 28(((1R,5S)-6,6-dimethyl-3-(quinoline-2-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carbonyl)-L -Phenylalanine) 500 mg, dissolved in 30 mL of dry methanol, sodium borohydride was added at room temperature, stirred for 3 hours, quenched by adding water, spin-dried methanol, and the aqueous phase was extracted with ethyl acetate (50 mL × 3), The collected organic phase was dried with sodium sulfate, and after suction filtration, the organic phase was spin-dried to obtain intermediate 29 with a yield of 80%.
化合物9:(1R,5S)-6,6-二甲基-N-((S)-1-氧-3-苯丙-2-基)-3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-甲酰胺的制备Compound 9: (1R,5S)-6,6-dimethyl-N-((S)-1-oxo-3-phenylpropan-2-yl)-3-(quinoline-2-carbonyl)-3 - Preparation of azabicyclo[3.1.0]hexane-2-carboxamide
将中间体29(1R,5S)-N-((S)-1-羟基-3-苯丙-2-基)-6,6-二甲基-3-(喹啉-2-羰基)-3-氮杂双环[3.1.0]己烷-2-甲酰胺200mg,溶于10mL干燥二氯甲烷中,常温搅拌条件下加入戴斯马丁氧化剂,TLC监控反应进行完毕,抽滤除去氧化剂,滤液柱层析得化合物9,产率65%。 1H NMR(400MHz,DMSO)δ9.55(s,1H),9.06(s,1H),8.56(d,J=7.3Hz,1H),8.44(dd,J=8.5,2.4Hz,1H),7.86(d,J=8.5Hz,1H),7.76(m,1H),7.32–7.21(m,5H),7.14(d,J=2.9Hz,,1H),7.08(d,J=5.7Hz,1H),5.33(s,1H),4.44(d,J=5.6Hz,1H),4.33(m,2H),4.13(m,2H),1.82(m,1H),1.50(m,1H),1.02(s,3H),0.87(s,3H)。 The intermediate 29(1R,5S)-N-((S)-1-hydroxy-3-phenylpropan-2-yl)-6,6-dimethyl-3-(quinoline-2-carbonyl)- 200 mg of 3-azabicyclo[3.1.0]hexane-2-carboxamide was dissolved in 10 mL of dry dichloromethane, and Dess Martin oxidant was added under stirring at room temperature. TLC monitored the completion of the reaction, and the oxidant was removed by suction filtration. The filtrate was Column chromatography gave compound 9 in 65% yield. 1 H NMR (400MHz, DMSO) δ 9.55(s, 1H), 9.06(s, 1H), 8.56(d, J=7.3Hz, 1H), 8.44(dd, J=8.5, 2.4Hz, 1H), 7.86(d,J=8.5Hz,1H),7.76(m,1H),7.32-7.21(m,5H),7.14(d,J=2.9Hz,,1H),7.08(d,J=5.7Hz, 1H), 5.33(s, 1H), 4.44(d, J=5.6Hz, 1H), 4.33(m, 2H), 4.13(m, 2H), 1.82(m, 1H), 1.50(m, 1H), 1.02(s, 3H), 0.87(s, 3H).
实施例4:制备化合物14Example 4: Preparation of Compound 14
Figure PCTCN2021076400-appb-000028
Figure PCTCN2021076400-appb-000028
按照上述制备路线制得本发明的化合物14,路线中各步骤的反应条件如下:The compound 14 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、三氟乙酸,二氯甲烷,25℃i, trifluoroacetic acid, dichloromethane, 25℃
ii、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,室温。ii, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, room temperature.
iii、氢氧化钠,甲醇,水,55度iii. Sodium hydroxide, methanol, water, 55 degrees
iv、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,0℃iv, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, 0°C
v、硼氢化钠,甲醇,室温v, sodium borohydride, methanol, room temperature
vi、戴斯马丁氧化剂,超干二氯甲烷,室温。vi. Dess Martin oxidizer, ultra-dry dichloromethane, room temperature.
以下为具体合成步骤:The following are the specific synthesis steps:
中间体30:甲基(S)-2-氨基-3-((S)-2-羰基-3-基)丙酸酯三氟乙酸盐的制备Intermediate 30: Preparation of methyl(S)-2-amino-3-((S)-2-carbonyl-3-yl)propionate trifluoroacetate
将(S)-甲基2-(叔-丁氧基羰基氨基)-3-((S)-2-羰基吡咯烷-3-基)丙酸酯(中间体14,2.5g)溶于30mL二氯甲烷中,再加入20mL三氟乙酸,常温搅拌14小时,然后直接旋干得粗产品直接用于下一步反应。(S)-Methyl 2-(tert-butoxycarbonylamino)-3-((S)-2-carbonylpyrrolidin-3-yl)propanoate (Intermediate 14, 2.5 g) was dissolved in 30 mL In the dichloromethane, 20 mL of trifluoroacetic acid was added, stirred at room temperature for 14 hours, and then directly spin-dried to obtain the crude product which was directly used in the next reaction.
中间体32:甲基(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环并[3.1.0]己烷-2-甲酸的制备Intermediate 32: Methyl(1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[ 3.1.0] Preparation of hexane-2-carboxylic acid
将2-(4-(三氟甲氧基)苯氧)乙酸(商业购得中间体31,0.24g,1.0mmol),2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(0.49g,1.2mmol)和N,N-二异丙基乙胺(494μL,3mmol)溶于一定N,N-二甲基甲酰胺中,然后加入(1R,2S,5S)-6,6-二甲基-3-氮杂双环[3.1.0]己烷-2-羧酸甲酯盐酸盐(商业购得中间体24,0.21g,1.0mmol).氩气保护 常温反应12小时.反应加入4倍体积水,用二氯甲烷萃取三次,合并有机相用饱和氯化铵溶液、饱和碳酸钠溶液洗涤,无水硫酸钠干燥后过滤,硅胶拌样柱层析(石油醚/乙酸乙酯=1:1)得到白色固体中间体32(0.34g,88%)。 1H NMR(400MHz,MeOD)δ7.19(d,J=8.9Hz,2H),7.00(d,J=8.7Hz,2H),4.80-4.71(m,2H),4.78–4.72(m,1H)3.89-3.72(m,1H),3.73(s,3H),3.67-3.60(m,1H),1.61-1.55(m,1H),1.49(d,J=7.4Hz,1H),1.08(s,3H),0.97(s,3H).ESI-MS(m/z):389.08(M+H) +. 2-(4-(Trifluoromethoxy)phenoxy)acetic acid (commercially available Intermediate 31, 0.24 g, 1.0 mmol), 2-(7-benzotriazole oxide)-N,N,N ',N'-tetramethylurea hexafluorophosphate (0.49g, 1.2mmol) and N,N-diisopropylethylamine (494μL, 3mmol) were dissolved in a certain amount of N,N-dimethylformamide, Then (1R,2S,5S)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxylate methyl ester hydrochloride (commercially available Intermediate 24, 0.21 g) was added , 1.0 mmol). The reaction was carried out under argon protection at room temperature for 12 hours. The reaction was added with 4 times the volume of water, extracted three times with dichloromethane, and the combined organic phases were washed with saturated ammonium chloride solution and saturated sodium carbonate solution, dried over anhydrous sodium sulfate and filtered. , and silica gel column chromatography (petroleum ether/ethyl acetate=1:1) gave intermediate 32 as a white solid (0.34 g, 88%). 1 H NMR(400MHz,MeOD)δ7.19(d,J=8.9Hz,2H),7.00(d,J=8.7Hz,2H),4.80-4.71(m,2H),4.78-4.72(m,1H) ) 3.89-3.72(m, 1H), 3.73(s, 3H), 3.67-3.60(m, 1H), 1.61-1.55(m, 1H), 1.49(d, J=7.4Hz, 1H), 1.08(s ,3H),0.97(s,3H).ESI-MS(m/z):389.08(M+H) + .
中间体33:(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环并[3.1.0]己烷-2-甲酸的制备Intermediate 33: (1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1. Preparation of 0] Hexane-2-carboxylic acid
用30mL甲醇溶解甲基(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环[3.1.0]己烷-2-甲酸(中间体32,200mg),然后加入2M NaOH溶液20mL.常温搅拌2.5小时.TLC监控反应结束后,旋干甲醇,用盐酸调pH至弱酸性,二氯甲烷萃取三次,合并有机相无水硫酸钠干燥后选干得粗产品直接进行下一步反应。Methyl(1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1 .0] Hexane-2-carboxylic acid (intermediate 32, 200mg), then add 2M NaOH solution 20mL. Stir at room temperature for 2.5 hours. After the TLC monitoring reaction finishes, spin dry methanol, adjust pH to weak acidity with hydrochloric acid, dichloromethane Extract three times, combine the organic phases and dry with anhydrous sodium sulfate and select the dry crude product to directly carry out the next step of the reaction.
中间体34:甲基(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环并[3.1.0]己烷--2-酰胺)-3-((S)-2-羰基-3-基)丙酸酯的制备Intermediate 34: Methyl(1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[ 3.1.0] Preparation of hexane--2-amide)-3-((S)-2-carbonyl-3-yl)propionate
在0℃反应条件下,往(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环[3.1.0]己烷-2-甲酸(中间体33,0.45g,1.2mmol)的超干DMF溶液中,加入2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(0.61g,1.6mmol),搅拌30分钟后,加入N.N-二异丙基乙胺(0.59mL,3.6mmol).然后,中间体14粗产品(0.27g 1.45mmol)加入反应体系。反应在0℃氩气保护条件下搅拌12小时。TLC监控反应完后,加入4倍体积的水,用乙酸乙酯萃取三次,合并有机相用饱和氯化铵溶液、饱和碳酸氢钠溶液洗涤,无水硫酸钠干燥后过滤,拌样柱层析(乙酸乙酯/甲醇=10:1)得到白色固体是为中间体34. 1H NMR(400MHz,MeOD)δ7.17(d,J=8.0Hz,2H),6.97(d,J=8.9Hz,2H),4.80–4.67(m,2H),4.55(d,J=11.8Hz,1H),3.94-3.83(m,1H),3.72(s,3H),3.68–3.57(m,1H),3.23–3.12(m,1H),3.11–3.00(m,2H),2.58(d,J=8.8Hz,1H),2.26–2.04(m,2H),1.73–1.40(m,4H),1.10(s,3H),0.92(s,3H).ESI-MS(m/z):542.13(M+H) +. Under the reaction conditions of 0 °C, to (1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo [3.1.0] Hexane-2-carboxylic acid (Intermediate 33, 0.45g, 1.2mmol) was added to the ultra-dry DMF solution, 2-(7-benzotriazole oxide)-N,N,N', N'-tetramethylurea hexafluorophosphate (0.61 g, 1.6 mmol), after stirring for 30 minutes, was added NN-diisopropylethylamine (0.59 mL, 3.6 mmol). Then, the crude product of Intermediate 14 (0.27 g 1.45 mmol) was added to the reaction system. The reaction was stirred at 0°C under argon for 12 hours. After the reaction was monitored by TLC, 4 times the volume of water was added, extracted three times with ethyl acetate, the combined organic phases were washed with saturated ammonium chloride solution and saturated sodium bicarbonate solution, dried over anhydrous sodium sulfate, filtered, and subjected to column chromatography with mixed sample (Ethyl acetate/methanol=10:1) The white solid was obtained as intermediate 34. 1 H NMR (400MHz, MeOD) δ 7.17 (d, J=8.0 Hz, 2H), 6.97 (d, J=8.9 Hz) ,2H),4.80–4.67(m,2H),4.55(d,J=11.8Hz,1H),3.94-3.83(m,1H),3.72(s,3H),3.68–3.57(m,1H), 3.23–3.12 (m, 1H), 3.11–3.00 (m, 2H), 2.58 (d, J=8.8Hz, 1H), 2.26–2.04 (m, 2H), 1.73–1.40 (m, 4H), 1.10 ( s,3H),0.92(s,3H).ESI-MS(m/z):542.13(M+H) + .
中间体35:(1R,2S,5S)-N-((S)-1-羟基-3-((S)-2-羰基-3-基)丙酸酯-2-基)-3-(2-(4-(三氟甲氧基)苯氧)乙酰基)-3-氮杂双环并[3.1.0]己烷-2-甲酰胺的制备Intermediate 35: (1R,2S,5S)-N-((S)-1-hydroxy-3-((S)-2-carbonyl-3-yl)propanoate-2-yl)-3-( Preparation of 2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1.0]hexane-2-carboxamide
将甲基(1R,2S,5S)-6,6-二甲基-3-(2-(4-(三氟甲氧基)苯氧)乙酰)-3-氮杂双环[3.1.0]己烷--2-酰胺)-3-((S)-2-羰基-3-基)丙酸酯(中间体340.56mg,1.1mmol)加入50毫升中,低温条件下分批加入硼氢化钠(0.14g,8.8mmol).反应常温条件下搅拌2小时后,加水淬灭,旋干甲醇, 用乙酸乙酯(50mL×3)对剩余水相进行萃取.有机相合并后用无水硫酸钠干燥,过滤旋干得白色固体为粗产品,被直接用于下一步反应。Methyl(1R,2S,5S)-6,6-dimethyl-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1.0] Hexane--2-amide)-3-((S)-2-carbonyl-3-yl)propionate (intermediate 340.56 mg, 1.1 mmol) was added to 50 mL, and sodium borohydride was added in portions at low temperature (0.14g, 8.8mmol). The reaction was stirred at room temperature for 2 hours, quenched by adding water, spin-dried methanol, and the remaining aqueous phase was extracted with ethyl acetate (50mL×3). The organic phases were combined with anhydrous sodium sulfate. Dry, filter and spin dry to obtain a white solid as a crude product, which is directly used in the next reaction.
化合物14:(1R,2S,5S)-6,6-二甲基-N-((S)-1-醛基-3-((S)-2-羰基-3-基)丙酸酯-2-基)-3-(2-(4-(三氟甲氧基)苯氧)乙酰基)-3-氮杂双环并[3.1.0]己烷-2-甲酰胺的制备Compound 14: (1R,2S,5S)-6,6-dimethyl-N-((S)-1-aldol-3-((S)-2-carbonyl-3-yl)propanoate- Preparation of 2-yl)-3-(2-(4-(trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1.0]hexane-2-carboxamide
将(1R,2S,5S)-N-((S)-1-羟基-3-((S)-2-羰基-3-基)丙酸酯-2-基)-3-(2-(4-(三氟甲氧基)苯氧)乙酰基)-3-氮杂双环[3.1.0]己烷-2-甲酰胺(中间体36,(0.38g,0.75mmol)溶于超干二氯甲烷中,然后分批加入戴斯马丁氧化剂(0.95mg,0.79mmol),室温条件下反应3.5小时,TLC监控反应结束,反应体系过滤,用硫代硫酸钠溶液和饱和碳酸氢钠溶液洗涤有机相,浓缩后用制备色谱分离体系(乙腈/水=30:70)分离得化合物14(0.28g,45%)as a white solid. 1H NMR(400MHz,MeOD)δ7.24–7.13(m,2H),7.04–6.92(m,2H),4.49(d,J=9.1Hz,1H),4.37-4.30(m,1H),4.06–3.89(m,1H),3.65-3.49(m,1H),3.11–2.98(m,1H),2.55(d,J=9.5Hz,1H),2.29–2.10(m,1H),2.06–1.99(m,1H),1.72–1.44(m,4H),1.13(s,3H),1.00(s,3H). 13C NMR(101MHz,MeOD)δ181.60,172.58,167.18,156.90,142.99,121.99,115.47(d,J=7.7Hz),66.06,61.05,60.14,51.26,46.00,39.94,37.75,30.87(d,J=7.8Hz),29.88(d,J=18.5Hz),27.66(d,J=17.9Hz),25.03,19.04,11.63.HRMS(m/z):calculated for C 24H 28F 3N 3O 6 +[M+H] +512.1964;found,512.2137. (1R,2S,5S)-N-((S)-1-hydroxy-3-((S)-2-carbonyl-3-yl)propanoate-2-yl)-3-(2-( 4-(Trifluoromethoxy)phenoxy)acetyl)-3-azabicyclo[3.1.0]hexane-2-carboxamide (Intermediate 36, (0.38 g, 0.75 mmol) was dissolved in ultra-dry dicyclomine In methyl chloride, then Dess Martin oxidant (0.95mg, 0.79mmol) was added in batches, and the reaction was carried out for 3.5 hours at room temperature. The reaction was monitored by TLC, and the reaction system was filtered. phase, concentrated and separated by preparative chromatography (acetonitrile/water=30:70) to obtain compound 14 (0.28 g, 45%) as a white solid. 1 H NMR (400 MHz, MeOD) δ 7.24–7.13 (m, 2H), 7.04-6.92(m, 2H), 4.49(d, J=9.1Hz, 1H), 4.37-4.30(m, 1H), 4.06-3.89(m, 1H), 3.65-3.49(m, 1H) , 3.11–2.98 (m, 1H), 2.55 (d, J=9.5Hz, 1H), 2.29–2.10 (m, 1H), 2.06–1.99 (m, 1H), 1.72–1.44 (m, 4H), 1.13 (s, 3H), 1.00 (s, 3H). 13 C NMR (101MHz, MeOD) δ 181.60, 172.58, 167.18, 156.90, 142.99, 121.99, 115.47 (d, J=7.7Hz), 66.06, 61.05, 60.14, 51.26 ,46.00,39.94,37.75,30.87(d,J=7.8Hz),29.88(d,J=18.5Hz),27.66(d,J=17.9Hz),25.03,19.04,11.63.HRMS(m/z): calculated for C 24 H 28 F 3 N 3 O 6 + [M+H] + 512.1964; found, 512.2137.
实施例5:化合物15的制备Example 5: Preparation of Compound 15
Figure PCTCN2021076400-appb-000029
Figure PCTCN2021076400-appb-000029
按照上述制备路线制得本发明的化合物15,路线中各步骤的反应条件如下:The compound 15 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,0℃i, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, 0°C
ii、硼氢化钠,甲醇,室温ii. Sodium borohydride, methanol, room temperature
iii、戴斯马丁氧化剂,超干二氯甲烷,室温。iii. Dess Martin oxidant, ultra-dry dichloromethane, room temperature.
具体合成步骤如下:The specific synthesis steps are as follows:
中间体36:甲基(S)-2-((1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺)-3-((S)-2-羰基-3-基)丙酸酯的制备Intermediate 36: Methyl(S)-2-((1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole- Preparation of 1-Carboxamide)-3-((S)-2-carbonyl-3-yl)propionate
首先,2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(0.099g,0.26mmol)被加入(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-羧酸(中间体23,0.071g,0.20mmol)的超干N,N-二甲基甲酰胺溶液中,反应体系先搅拌30分钟,N,N-二异丙基乙胺(100μL,0.60mmol),甲基(S)-2-氨基-3-((S)-2-羰基-3-基)丙酸酯三氟乙酸盐(中间体30,0.060g,0.32mmol)被依次加入反应体系.反应在0℃氩气保护条件下反应12小时,TLC监控反应结束,加入4倍体积的水,用乙酸乙酯萃取三次,合并有机相用饱和氯化铵溶液、饱和碳酸氢钠溶液洗涤,无水硫酸钠干燥后过滤,拌样柱层析(乙酸乙酯/甲醇=10:1)获得中间体36(0.063g,59%). 1H NMR(400MHz,MeOD)δ7.40(d,J=2.5Hz,1H),7.26–7.19(m,1H),6.95(d,J=8.9Hz,1H),4.79-4.71(m,2H),4.54(d,J=3.7Hz,1H),4.25(t,J=4.3Hz,1H),3.72(s,3H),3.54–3.46(m,2H),3.21–3.12(m,1H),3.10–2.99(m,1H),2.86-2.70(m,2H),2.04–1.97(m,2H),1.96-1-85(m,3H),1.83–1.46(m,6H).ESI-MS(m/z):526.03(M+H) +. First, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate (0.099 g, 0.26 mmol) was added to (1S,3aR,6aS)- Ultradry N,N of 2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylic acid (Intermediate 23, 0.071 g, 0.20 mmol) -In dimethylformamide solution, the reaction system was first stirred for 30 minutes, N,N-diisopropylethylamine (100 μL, 0.60 mmol), methyl (S)-2-amino-3-((S)- 2-Carbonyl-3-yl) propionate trifluoroacetate (intermediate 30, 0.060 g, 0.32 mmol) was added to the reaction system in turn. The reaction was carried out at 0 ° C under argon protection for 12 hours, and TLC monitoring was completed. , 4 times the volume of water was added, extracted three times with ethyl acetate, the combined organic phases were washed with saturated ammonium chloride solution and saturated sodium bicarbonate solution, dried over anhydrous sodium sulfate, filtered, and subjected to mixed sample column chromatography (ethyl acetate/ Methanol=10:1) to obtain intermediate 36 (0.063g, 59%). 1 H NMR (400MHz, MeOD) δ 7.40 (d, J=2.5Hz, 1H), 7.26–7.19 (m, 1H), 6.95 (d, J=8.9Hz, 1H), 4.79-4.71 (m, 2H), 4.54 (d, J=3.7Hz, 1H), 4.25 (t, J=4.3Hz, 1H), 3.72 (s, 3H) ,3.54-3.46(m,2H),3.21-3.12(m,1H),3.10-2.99(m,1H),2.86-2.70(m,2H),2.04-1.97(m,2H),1.96-1- 85(m, 3H), 1.83–1.46(m, 6H). ESI-MS(m/z): 526.03(M+H) + .
中间体37:(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)-N-((S)-1-羟基-3-((S)-2-羰基-3-基)丙酸酯-2-基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Intermediate 37: (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)-N-((S)-1-hydroxy-3-((S)-2 Preparation of -carbonyl-3-yl)propionate-2-yl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
将甲基(S)-2-((1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺)-3-((S)-2-羰基-3-基)丙酸酯(中间体36,1,00g,2.0mmol)溶于无水甲醇中,然后再0℃条件下分批加入硼氢化钠(0.6g,16mmol),然后将温度升至室温,继续搅拌2小时,TLC检测反应结束,加水淬灭,旋干甲醇,用乙酸乙酯(50mL×3)对剩余水相进行萃取.有机相合并后用无水硫酸钠干燥,过滤旋干得白色固体为粗产品,被直接用于下一步反应。Methyl(S)-2-((1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-methyl Amide)-3-((S)-2-carbonyl-3-yl)propionate (Intermediate 36, 1,00 g, 2.0 mmol) was dissolved in anhydrous methanol, and then boron was added in batches at 0 °C Sodium hydride (0.6 g, 16 mmol), then the temperature was raised to room temperature, and stirring was continued for 2 hours. TLC detected the end of the reaction, quenched by adding water, spin-dried methanol, and extracted the remaining aqueous phase with ethyl acetate (50 mL×3). The organic phases were combined, dried with anhydrous sodium sulfate, filtered and spin-dried to obtain a white solid as a crude product, which was directly used in the next reaction.
化合物15:(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)-N-((S)-1-醛基-3-((S)-2-羰基-3-基)丙酸酯-2-基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Compound 15: (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)-N-((S)-1-aldehyde-3-((S)-2 Preparation of -carbonyl-3-yl)propionate-2-yl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
在(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)-N-((S)-1-羟基-3-((S)-2-羰基-3-基)丙酸酯-2-基)八氢环戊烯并[c]吡咯-1-甲酰胺(中间体37,0.50g,1.0mmol)的超干二氯甲烷溶液中,分批缓慢加入戴斯马丁氧化剂(0.55g,1.3mmol),室温条件下反应3.5小时,TLC监控反应结束,反应体系过滤,用硫代硫酸钠溶液和饱和碳酸氢钠溶液洗涤有机相,浓缩后用制备色谱分离体系(乙腈/水=45:55)得到白色固体化合物30(0.21g,42%)。 1H NMR(400MHz,MeOD)δ7.42(t,J=4.3Hz,1H),7.28–7.17(m,1H),7.03–6.90(m,1H),4.47(dd,J=9.6,6.1 Hz,1H),4.26(t,J=5.8Hz,1H),4.03–3.86(m,2H),3.51(dd,J=10.4,4.0Hz,1H),3.15(t,J=8.4Hz,1H),3.04–2.82(m,2H),2.75–2.50(m,2H),2.18(dd,J=13.2,7.0Hz,1H),2.18(dd,J=13.2,7.0Hz,1H),2.08–1.77(m,5H),1.76–1.43(m,5H). 13C NMR(101MHz,MeOD)δ181.64,173.39,167.10(d,J=2.9Hz),152.81,129.30,127.35,125.73,123.12,114.81,66.81,60.14,53.90(d,J=35.6Hz),52.20,51.20(d,J=18.6Hz),43.34,40.00,37.73,31.69(d,J=4.2Hz),31.14(d,J=2.6Hz),29.62(d,J=24.1Hz),27.67,24.69,19.48,13.09.HRMS(m/z):calculated for C 23H 27Cl 2N 3O 5 +[M+H] +496.1361;found,496.0842. In (1S,3aR,6aS)-2-(2-(2,4-dichlorophenoxy)acetyl)-N-((S)-1-hydroxy-3-((S)-2-carbonyl- 3-yl)propionate-2-yl)octahydrocyclopenteno[c]pyrrole-1-carboxamide (Intermediate 37, 0.50 g, 1.0 mmol) in ultra-dry dichloromethane, slowly in batches Dess Martin oxidant (0.55g, 1.3mmol) was added, reacted at room temperature for 3.5 hours, TLC monitored the reaction, the reaction system was filtered, the organic phase was washed with sodium thiosulfate solution and saturated sodium bicarbonate solution, concentrated and then used for preparative chromatography. The system was separated (acetonitrile/water=45:55) to give compound 30 as a white solid (0.21 g, 42%). 1 H NMR (400MHz, MeOD) δ 7.42 (t, J=4.3Hz, 1H), 7.28-7.17 (m, 1H), 7.03-6.90 (m, 1H), 4.47 (dd, J=9.6, 6.1 Hz) ,1H),4.26(t,J=5.8Hz,1H),4.03–3.86(m,2H),3.51(dd,J=10.4,4.0Hz,1H),3.15(t,J=8.4Hz,1H) , 3.04–2.82 (m, 2H), 2.75–2.50 (m, 2H), 2.18 (dd, J=13.2, 7.0Hz, 1H), 2.18 (dd, J=13.2, 7.0Hz, 1H), 2.08–1.77 (m, 5H), 1.76–1.43 (m, 5H). 13 C NMR (101MHz, MeOD) δ 181.64, 173.39, 167.10 (d, J=2.9Hz), 152.81, 129.30, 127.35, 125.73, 123.12, 114.81, 66.81 ,60.14,53.90(d,J=35.6Hz),52.20,51.20(d,J=18.6Hz),43.34,40.00,37.73,31.69(d,J=4.2Hz),31.14(d,J=2.6Hz) ,29.62(d,J=24.1Hz),27.67,24.69,19.48,13.09.HRMS(m/z):calculated for C 23 H 27 Cl 2 N 3 O 5 + [M+H] + 496.1361; found, 496.0842 .
实施例6:化合物42的制备Example 6: Preparation of Compound 42
Figure PCTCN2021076400-appb-000030
Figure PCTCN2021076400-appb-000030
按照上述制备路线制得本发明的化合物42,路线中各步骤的反应条件如下:The compound 42 of the present invention was prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route were as follows:
i、LDA,ClCH 2I,THF i, LDA, ClCH 2 I, THF
ii、HCl二氧六环溶液ii. HCl dioxane solution
iii、2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯,N,N-二异丙基乙胺,N,N-二甲基甲酰胺,0℃。iii, 2-(7-benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate, N,N-diisopropylethylamine, N,N-diisopropylethylamine Methylformamide, 0°C.
具体合成步骤如下:The specific synthesis steps are as follows:
中间体38:叔丁基((S)-4-氯-3-氧-1-((S)-2-羰基-3-基)丁烷-2-基)氨基甲酸酯的制备Intermediate 38: Preparation of tert-butyl ((S)-4-chloro-3-oxo-1-((S)-2-carbonyl-3-yl)butan-2-yl)carbamate
选取干燥三口瓶,分别准备氩气保护和温度计,加入(S)-甲基2-(叔-丁氧基羰基氨基)-3-((S)-2-羰基吡咯烷-3-基)丙酸酯(中间体16,5g,17.5mmol),四氢呋喃(50mL),氯碘甲烷(5mL,68mmol)在-77℃下进行搅拌.二异丙基氨基锂(70mL,105mmol)被进一步滴入。加完以后进一步反应2小时,然后再低温条件下加入乙酸和四氢呋喃进行淬灭,产生的黑色悬浮物被进一步搅拌10分钟同时升温至室温。反应进一步用乙酸乙酯稀释,用水、饱和碳酸氢钠溶液和饱和食盐水洗涤,无水硫酸钠干燥后,过滤浓缩拌样柱层析得浅黄色固体为中间体38。 1H NMR(400MHz,DMSO-d 6)δ7.89(s,1H),7.72(d,J=7.5Hz,1H),4.72-4.94(m,2H),4.35(m,1H),3.26-3.40(m,2H),2.45(m,1H),2.32-2.42(m,1H),2.00-2.14(m,1H),1.79-1.99(m,2H),1.61(s,9H)。 Choose a dry three-necked flask, prepare argon protection and a thermometer respectively, add (S)-methyl 2-(tert-butoxycarbonylamino)-3-((S)-2-carbonylpyrrolidin-3-yl)propane Acid ester (Intermediate 16, 5 g, 17.5 mmol), tetrahydrofuran (50 mL), chloroiodomethane (5 mL, 68 mmol) were stirred at -77°C. Lithium diisopropylamide (70 mL, 105 mmol) was further added dropwise. After the addition was completed, the reaction was further carried out for 2 hours, and then acetic acid and tetrahydrofuran were added under low temperature conditions for quenching, and the resulting black suspension was further stirred for 10 minutes while warming to room temperature. The reaction was further diluted with ethyl acetate, washed with water, saturated sodium bicarbonate solution and saturated brine, dried over anhydrous sodium sulfate, filtered and concentrated by column chromatography to obtain a pale yellow solid as intermediate 38. 1 H NMR (400MHz, DMSO-d 6 ) δ 7.89(s, 1H), 7.72(d, J=7.5Hz, 1H), 4.72-4.94(m, 2H), 4.35(m, 1H), 3.26- 3.40(m, 2H), 2.45(m, 1H), 2.32-2.42(m, 1H), 2.00-2.14(m, 1H), 1.79-1.99(m, 2H), 1.61(s, 9H).
中间体39:(S)-3-((S)-2-氨基-4-氯-3-氧丁基)吡咯烷-2-酮盐酸盐 的制备Intermediate 39: Preparation of (S)-3-((S)-2-amino-4-chloro-3-oxobutyl)pyrrolidin-2-one hydrochloride
将叔丁基((S)-4-氯-3-氧-1-((S)-2-羰基-3-基)丁烷-2-基)氨基甲酸酯(中间体38)250mg加入20mL二氧六环中,随后加入20mL氯化氢二氧六环溶液20mL,常温搅拌4小时后,TLC检测反应完,旋干反应液得粗产品用于下一步反应。250 mg of tert-butyl ((S)-4-chloro-3-oxo-1-((S)-2-carbonyl-3-yl)butan-2-yl)carbamate (Intermediate 38) was added In 20 mL of dioxane, 20 mL of 20 mL of hydrogen chloride dioxane solution was then added, and after stirring at room temperature for 4 hours, TLC detected the completion of the reaction, and the reaction solution was spin-dried to obtain a crude product for the next reaction.
化合物42:(1S,3aR,6aS)-N-((S)-4-氯-3-氧-1-((S)-2-羰基-3-基)丁烷-2-基)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Compound 42: (1S,3aR,6aS)-N-((S)-4-chloro-3-oxo-1-((S)-2-carbonyl-3-yl)butan-2-yl)-2 Preparation of -(2-(2,4-Dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
将2-(7-氧化苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(1g,2.6mmol)加入(1S,3aR,6aS)-2-(2-(2,4-二氯苯氧)乙酰基)八氢环戊烯并[c]吡咯-1-羧酸(中间体23,0.71g,2.0mmol)的超干N,N-二甲基甲酰胺溶液中,反应体系先搅拌30分钟,N,N-二异丙基乙胺(1mL,6.0mmol),(S)-3-((S)-2-氨基-4-氯-3-氧丁基)吡咯烷-2-酮盐酸盐(中间体39,0.652g,3.2mmol)被依次加入反应体系.反应在0℃氩气保护条件下反应16小时,TLC监控反应结束,加入3倍体积的水,用乙酸乙酯萃取三次,合并有机相用饱和氯化铵溶液、饱和碳酸氢钠溶液洗涤,无水硫酸钠干燥后过滤,制备纯化系统(乙腈/水=30:70)分离获得化合物42. 1H NMR(400MHz,MeOD)δ7.40(s,1H),7.20(dd,J=8.7,2.4Hz,1H),7.05–6.91(m,1H),5.00–4.89(m,1H),4.79(d,J=16.1Hz,1H),4.69–4.35(m,2H),4.25(m,1H),3.99–3.85(m,1H),3.58–3.45(m,1H),3.25–3.03(m,1H),2.93–2.77(m,1H),2.76–2.50(m,2H),2.45–2.24(m,1H),2.18(d,J=10.9Hz,1H),2.11–1.47(m,9H),1.39–1.27(m,1H).ESI-MS(m/z):544.07(M+H) +. 2-(7-Benzotriazole oxide)-N,N,N',N'-tetramethylurea hexafluorophosphate (1 g, 2.6 mmol) was added to (1S,3aR,6aS)-2-( Ultradry N,N-dimethylform of 2-(2,4-dichlorophenoxy)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxylic acid (Intermediate 23, 0.71 g, 2.0 mmol) In the methylformamide solution, the reaction system was first stirred for 30 minutes, N,N-diisopropylethylamine (1 mL, 6.0 mmol), (S)-3-((S)-2-amino-4-chloro-3 -Oxybutyl) pyrrolidin-2-one hydrochloride (intermediate 39, 0.652g, 3.2mmol) was added to the reaction system successively. The reaction was reacted under 0 ° C of argon protection for 16 hours, and the TLC monitoring reaction was completed, adding 3 times the volume of water, extracted three times with ethyl acetate, the combined organic phases were washed with saturated ammonium chloride solution and saturated sodium bicarbonate solution, dried over anhydrous sodium sulfate and filtered to prepare a purification system (acetonitrile/water=30:70) Compound 42 was isolated and obtained. 1 H NMR(400MHz, MeOD)δ7.40(s,1H),7.20(dd,J=8.7,2.4Hz,1H),7.05-6.91(m,1H),5.00-4.89(m ,1H),4.79(d,J=16.1Hz,1H),4.69-4.35(m,2H),4.25(m,1H),3.99-3.85(m,1H),3.58-3.45(m,1H), 3.25–3.03 (m, 1H), 2.93–2.77 (m, 1H), 2.76–2.50 (m, 2H), 2.45–2.24 (m, 1H), 2.18 (d, J=10.9Hz, 1H), 2.11– 1.47(m, 9H), 1.39–1.27(m, 1H). ESI-MS(m/z): 544.07(M+H) + .
实施例7:化合物50的制备Example 7: Preparation of Compound 50
Figure PCTCN2021076400-appb-000031
Figure PCTCN2021076400-appb-000031
按照上述制备路线制得本发明的化合物50,路线中各步骤的反应条件如下:The compound 50 of the present invention is prepared according to the above-mentioned preparation route, and the reaction conditions of each step in the route are as follows:
i、叔丁基乙异腈,乙酸,超干二氯甲烷;i, tert-butylacetonitrile, acetic acid, ultra-dry dichloromethane;
ii、1M氢氧化钠溶液,甲醇;ii, 1M sodium hydroxide solution, methanol;
iii、戴斯马丁氧化剂、超干二氯甲烷。iii. Dess Martin oxidant, ultra-dry dichloromethane.
具体合成步骤如下:The specific synthesis steps are as follows:
中间体40:(3S)-1-(叔丁氨基)-3-((1S,3aR,6aS)-2-(2-(2,4-二氯)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺)-1-氧代-4-((S)-2-羰基-3-基)丁烷-2-基羧酸的制备Intermediate 40: (3S)-1-(tert-Butylamino)-3-((1S,3aR,6aS)-2-(2-(2,4-dichloro)acetyl)octahydrocyclopenteno[ Preparation of c]pyrrole-1-carboxamide)-1-oxo-4-((S)-2-carbonyl-3-yl)butan-2-ylcarboxylic acid
首先,化合物15(0.40mmol)被溶于超干二氯甲烷中,然后依次加入乙酸(0.028g,0.47mmol),叔丁基异腈(0.43mmol)。反应在常温条件下搅拌24小时,减压蒸馏柱层析(二氯甲烷/甲醇=15:1)得到中间体40。 1H NMR(400MHz,DMSO-d 6)δ7.87(d,J=12.1Hz,1H),7.46(s,1H),7.44(d,J=1.4Hz,1H),7.37(t,J=4.6Hz,1H),7.27(dd,J=7.5,1.5Hz,1H),7.11(d,J=7.5Hz,1H),5.09(d,J=7.1Hz,1H),4.82(s,2H),4.36–4.28(m,2H),3.64(ddd,J=59.5,12.4,7.0Hz,2H),3.22(td,J=7.1,4.6Hz,2H),2.67–2.44(m,3H),2.09(s,3H),1.99–1.51(m,10H),1.27(s,9H)。 First, compound 15 (0.40 mmol) was dissolved in ultra-dry dichloromethane, then acetic acid (0.028 g, 0.47 mmol), tert-butylisonitrile (0.43 mmol) were added sequentially. The reaction was stirred at room temperature for 24 hours, and the intermediate 40 was obtained by distillation column chromatography under reduced pressure (dichloromethane/methanol=15:1). 1 H NMR (400MHz, DMSO-d 6 ) δ 7.87 (d, J=12.1 Hz, 1H), 7.46 (s, 1H), 7.44 (d, J=1.4 Hz, 1H), 7.37 (t, J= 4.6Hz, 1H), 7.27 (dd, J=7.5, 1.5Hz, 1H), 7.11 (d, J=7.5Hz, 1H), 5.09 (d, J=7.1Hz, 1H), 4.82 (s, 2H) ,4.36–4.28(m,2H),3.64(ddd,J=59.5,12.4,7.0Hz,2H),3.22(td,J=7.1,4.6Hz,2H),2.67–2.44(m,3H),2.09 (s, 3H), 1.99–1.51 (m, 10H), 1.27 (s, 9H).
中间体41:(1S,3aR,6aS)-N-((2S)-4-(叔丁氨基)-3-羟基-4-氧代-1-((S)-2-羰基-3-基)丁烷-2-基)-2-(2-(2,4-二氯)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Intermediate 41: (1S,3aR,6aS)-N-((2S)-4-(tert-butylamino)-3-hydroxy-4-oxo-1-((S)-2-carbonyl-3-yl ) butan-2-yl)-2-(2-(2,4-dichloro)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
1M的氢氧化钠溶液被加入(0.5mL)中间体40(0.164mmol)的甲醇溶液中,反应在常温条件下搅拌2小时,用1M盐酸调pH到中性.旋干反应液,残渣用二氯甲烷溶解,用水萃取后旋干反应液得粗产品41直接用于下一步反应。1M sodium hydroxide solution was added (0.5mL) to the methanol solution of intermediate 40 (0.164mmol), the reaction was stirred at room temperature for 2 hours, and the pH was adjusted to neutrality with 1M hydrochloric acid. The methyl chloride was dissolved, extracted with water, and the reaction solution was spin-dried to obtain the crude product 41, which was directly used in the next reaction.
化合物50:(1S,3aR,6aS)-N-((S)-4-(叔丁氨基)-3,4-氧代-1-((S)-2-羰基-3-基)丁烷-2-基)-2-(2-2,4-二氯)乙酰基)八氢环戊烯并[c]吡咯-1-甲酰胺的制备Compound 50: (1S,3aR,6aS)-N-((S)-4-(tert-butylamino)-3,4-oxo-1-((S)-2-carbonyl-3-yl)butane Preparation of -2-yl)-2-(2-2,4-dichloro)acetyl)octahydrocyclopenteno[c]pyrrole-1-carboxamide
在中间体41的超干二氯甲烷溶液中,分批缓慢加入戴斯马丁氧化剂,室温条件下反应4小时,TLC监控反应结束,反应体系过滤,用硫代硫酸钠溶液和饱和碳酸氢钠溶液洗涤有机相,浓缩后用制备色谱分离体系(乙腈/水=50:50)得到白色固体化合物50。 1H NMR(400MHz,MEOD)δ7.42(d,J=1.4Hz,1H),7.26(dd,J=7.5,1.5Hz,1H),7.12(d,J=7.5Hz,1H),4.84(s,2H),4.67(dt,J=11.9,7.0Hz,1H),4.36(dd,J=7.0,0.7Hz,1H),3.74–3.57(m,2H),3.23–3.13(m,2H),2.70–2.46(m,3H),2.15–1.54(m,10H),1.43(s,9H).ESI-MS(m/z):595.07(M+H) +In the ultra-dry dichloromethane solution of intermediate 41, Dess Martin oxidant was slowly added in batches, and the reaction was carried out at room temperature for 4 hours. TLC monitored the end of the reaction, and the reaction system was filtered, using sodium thiosulfate solution and saturated sodium bicarbonate solution. The organic phase was washed, concentrated and separated by preparative chromatography (acetonitrile/water=50:50) to obtain compound 50 as a white solid. 1 H NMR (400MHz, MEOD) δ 7.42 (d, J=1.4Hz, 1H), 7.26 (dd, J=7.5, 1.5Hz, 1H), 7.12 (d, J=7.5Hz, 1H), 4.84 ( s, 2H), 4.67 (dt, J=11.9, 7.0Hz, 1H), 4.36 (dd, J=7.0, 0.7Hz, 1H), 3.74–3.57 (m, 2H), 3.23–3.13 (m, 2H) , 2.70–2.46 (m, 3H), 2.15–1.54 (m, 10H), 1.43 (s, 9H). ESI-MS (m/z): 595.07 (M+H) + .
根据实施例1~7中的制备路线,改变原料,制得本发明表1所示的剩余化合物。According to the preparation routes in Examples 1 to 7, the raw materials were changed to obtain the remaining compounds shown in Table 1 of the present invention.
表1本发明化合物的结构和表征数据Table 1 Structure and Characterization Data of Compounds of the Invention
Figure PCTCN2021076400-appb-000032
Figure PCTCN2021076400-appb-000032
Figure PCTCN2021076400-appb-000033
Figure PCTCN2021076400-appb-000033
Figure PCTCN2021076400-appb-000034
Figure PCTCN2021076400-appb-000034
Figure PCTCN2021076400-appb-000035
Figure PCTCN2021076400-appb-000035
Figure PCTCN2021076400-appb-000036
Figure PCTCN2021076400-appb-000036
Figure PCTCN2021076400-appb-000037
Figure PCTCN2021076400-appb-000037
Figure PCTCN2021076400-appb-000038
Figure PCTCN2021076400-appb-000038
Figure PCTCN2021076400-appb-000039
Figure PCTCN2021076400-appb-000039
Figure PCTCN2021076400-appb-000040
Figure PCTCN2021076400-appb-000040
Figure PCTCN2021076400-appb-000041
Figure PCTCN2021076400-appb-000041
Figure PCTCN2021076400-appb-000042
Figure PCTCN2021076400-appb-000042
Figure PCTCN2021076400-appb-000043
Figure PCTCN2021076400-appb-000043
Figure PCTCN2021076400-appb-000044
Figure PCTCN2021076400-appb-000044
Figure PCTCN2021076400-appb-000045
Figure PCTCN2021076400-appb-000045
Figure PCTCN2021076400-appb-000046
Figure PCTCN2021076400-appb-000046
Figure PCTCN2021076400-appb-000047
Figure PCTCN2021076400-appb-000047
Figure PCTCN2021076400-appb-000048
Figure PCTCN2021076400-appb-000048
Figure PCTCN2021076400-appb-000049
Figure PCTCN2021076400-appb-000049
Figure PCTCN2021076400-appb-000050
Figure PCTCN2021076400-appb-000050
Figure PCTCN2021076400-appb-000051
Figure PCTCN2021076400-appb-000051
Figure PCTCN2021076400-appb-000052
Figure PCTCN2021076400-appb-000052
Figure PCTCN2021076400-appb-000053
Figure PCTCN2021076400-appb-000053
Figure PCTCN2021076400-appb-000054
Figure PCTCN2021076400-appb-000054
Figure PCTCN2021076400-appb-000055
Figure PCTCN2021076400-appb-000055
Figure PCTCN2021076400-appb-000056
Figure PCTCN2021076400-appb-000056
Figure PCTCN2021076400-appb-000057
Figure PCTCN2021076400-appb-000057
Figure PCTCN2021076400-appb-000058
Figure PCTCN2021076400-appb-000058
以下通过实验例证明本发明化合物的药理效果。The pharmacological effects of the compounds of the present invention are demonstrated below through experimental examples.
实验例1:本发明化合物对M pro酶活力抑制水平的测试 Experimental Example 1: Test of the Inhibitory Level of the Compounds of the Invention on Mpro Enzyme Activity
(1)实验方法(1) Experimental method
将重组SARS-CoV-2M pro(最终浓度为750nM)与每种化合物的系列稀释液混合在25μL分析缓冲液(20mM Tris–HCl,pH 7.5,150mM NaCl,1mM EDTA,2mM DTT)中,并孵育10分钟。通过添加最终浓度为20μM的25μL荧光底物(MCA-AVLQ↓SGFR-Lys(Dnp)-Lys-NH2)来启动反应,用酶标仪测定320nm(激发)/405nm(发射)处的荧光信号。计算加入不同浓度化合物的反应的Vmax与加入DMSO的反应的Vmax,并用其生成IC 50曲线。对于每种化合物,在9种浓度和3个独立重复下测量抗SARS-CoV-2M pro的半抑制浓度(IC 50)值。所有实验数据均采用GraphPad Prism软件进行分析。 Recombinant SARS-CoV-2M pro (750 nM final concentration) was mixed with serial dilutions of each compound in 25 μL of assay buffer (20 mM Tris–HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 2 mM DTT) and incubated 10 minutes. The reaction was initiated by adding 25 μL of fluorogenic substrate (MCA-AVLQ↓SGFR-Lys(Dnp)-Lys-NH2) at a final concentration of 20 μM, and the fluorescence signal at 320nm (excitation)/405nm (emission) was measured with a microplate reader. The Vmax of the reaction to which different concentrations of compound were added and the Vmax of the reaction to which DMSO was added was calculated and used to generate an IC50 curve. For each compound, half inhibitory concentration ( IC50 ) values against SARS-CoV-2M pro were measured at 9 concentrations and 3 independent replicates. All experimental data were analyzed using GraphPad Prism software.
(2)实验结果(2) Experimental results
表2化合物对SARS-COV-2M pro的酶活抑制效果 The enzymatic activity inhibition effect of table 2 compounds on SARS-COV-2M pro
化合物compound 抗M pro IC 50(μM) Anti-M pro IC 50 (μM)
11 1.11.1
22 0.110.11
33 0.0180.018
44 0.0120.012
55 0.0110.011
66 0.0090.009
77 0.0150.015
88 0.0170.017
99 24.2424.24
1010 0.5850.585
1111 0.9600.960
1212 16.9316.93
1313 82.7482.74
1414 0.0140.014
1515 0.0160.016
1616 0.3430.343
1717 0.0200.020
1818 0.0280.028
1919 0.0110.011
2020 0.0120.012
21twenty one 0.0730.073
22twenty two 0.0930.093
23twenty three 0.0370.037
24twenty four 0.0220.022
2525 0.0160.016
2626 0.0090.009
2727 0.0540.054
2828 0.0470.047
2929 0.0780.078
3030 0.0140.014
3131 0.0150.015
3232 0.0360.036
3333 0.0130.013
3434 0.0200.020
3535 0.0510.051
3636 0.0160.016
3737 0.0070.007
3838 0.0910.091
3939 0.0330.033
4040 0.0170.017
4141 0.0560.056
4242 0.1900.190
4343 0.0090.009
4444 0.0100.010
4545 0.0190.019
4646 0.0100.010
4747 0.0120.012
4848 0.0110.011
4949 0.0220.022
5050 1.1901.190
5151 50.3950.39
5252 0.8750.875
5353 63.0963.09
5454 0.0240.024
5555 0.0310.031
5656 0.0330.033
5757 0.0260.026
5858 0.0300.030
5959 0.0370.037
6060 0.0330.033
6161 0.0390.039
6262 0.0400.040
6363 0.0260.026
6464 0.0330.033
6565 0.0440.044
6666 0.0360.036
6767 0.0400.040
6868 0.0350.035
6969 0.1070.107
7070 0.0810.081
7171 0.0400.040
7272 0.0310.031
7373 0.0310.031
7474 0.0510.051
7575 0.0410.041
7676 0.0510.051
7777 0.0560.056
7878 0.0680.068
7979 0.0650.065
8080 0.0230.023
从表2和图1、图2、图3可以看出,本发明的化合物能够有效抑制SARS-CoV-2M pro的活性,可以用来制备SARS-CoV-2M pro抑制剂,制备抗新型冠状病毒的药物,以及制备预防和/或治疗新型冠状病毒肺炎的药物。 It can be seen from Table 2 and Figure 1, Figure 2 and Figure 3 that the compounds of the present invention can effectively inhibit the activity of SARS-CoV-2M pro , and can be used to prepare SARS-CoV-2M pro inhibitors and anti-new coronavirus medicines, and the preparation of medicines for the prevention and/or treatment of novel coronavirus pneumonia.
实验例2:本发明的化合物对SARS-COV-2感染Vero E6细胞导致细胞死亡的抑制实验Experimental Example 2: Inhibition experiment of the compounds of the present invention on cell death caused by SARS-COV-2 infection of Vero E6 cells
(1)实验方法(1) Experimental method
通过检测化合物对SARS-COV-2感染Vero E6细胞导致的细胞死亡的抑制效果,初步评价化合物的抗病毒活性。具体实验方案是:将Vero E6细胞以细胞密度为2×10 4细胞/孔,100μL/孔接种在96孔板内,于37℃,5%CO 2培养箱中培育过夜。次日,每孔同时加入100μL 药物和100μL病毒稀释液(MOI=1),设置不含药物的阳性对照和不含病毒的阴性对照,37℃,5%CO 2培养,72h后,通过CCK-8试剂盒检测细胞存活率,计算药物对病毒复制的抑制率和半数起效浓度(EC 50)值,所有实验设置3个独立重复,所有实验数据均采用GraphPad Prism软件进行分析。 The antiviral activity of the compounds was preliminarily evaluated by detecting the inhibitory effect of the compounds on cell death caused by SARS-COV-2 infection of Vero E6 cells. The specific experimental protocol is as follows: Vero E6 cells were seeded in a 96-well plate at a cell density of 2×10 4 cells/well, 100 μL/well, and incubated overnight at 37° C. in a 5% CO 2 incubator. The next day, 100 μL of drug and 100 μL of virus diluent (MOI= 1 ) were added to each well at the same time, and a drug-free positive control and a virus-free negative control were set up. 8 kits were used to detect cell viability, and the inhibition rate and half-effect concentration (EC 50 ) value of drugs on virus replication were calculated. All experiments were set up as 3 independent replicates, and all experimental data were analyzed by GraphPad Prism software.
(2)实验结果(2) Experimental results
表3本发明化合物对SARS-COV-2感染Vero E6细胞导致细胞死亡的抑制活性Table 3 Inhibitory activity of the compounds of the present invention to cell death caused by SARS-COV-2 infection of Vero E6 cells
化合物compound EC 50(μM) EC50 (μM)
11 NTNT
22 NTNT
33 NTNT
44 NTNT
55 NTNT
66 NTNT
77 NTNT
88 NTNT
99 NT NT
1010 NT NT
1111 NTNT
1212 NTNT
1313 NT NT
1414 0.860.86
1515 0.540.54
1616 NTNT
1717 24.7224.72
1818 NTNT
1919 5.635.63
2020 1.731.73
21twenty one NTNT
22twenty two NTNT
23twenty three NTNT
24twenty four 1.501.50
2525 NT NT
2626 0.670.67
2727 1.271.27
2828 4.684.68
2929 NT NT
3030 1.151.15
3131 1.181.18
3232 NTNT
3333 5.575.57
3434 1.641.64
3535 NTNT
3636 2.232.23
3737 2.972.97
3838 NTNT
3939 NT NT
4040 NTNT
4141 NTNT
4242 NT NT
4343 0.530.53
4444 0.660.66
4545 0.830.83
4646 NTNT
4747 NTNT
4848 NTNT
4949 NTNT
5050 NTNT
5151 NTNT
5252 NTNT
5353 NTNT
5555 NTNT
5656 NTNT
5757 NTNT
5858 NTNT
5959 NT NT
6060 NTNT
6161 NTNT
6262 NTNT
6363 NTNT
6464 NTNT
6565 NTNT
6666 NTNT
6767 NTNT
6868 NTNT
6969 NTNT
7070 NTNT
7171 NTNT
7272 NTNT
7373 NTNT
7474 NTNT
7575 NTNT
7676 NTNT
7777 NTNT
7878 NTNT
注:NT代表未测试细胞活性Note: NT stands for untested cell viability
从表3可以看出,本发明的化合物能够有效抑制SARS-COV-2感染Vero E6细胞导致的细胞死亡,说明本发明的化合物可以有效抑制SARS-COV-2病毒在细胞内的复制。As can be seen from Table 3, the compound of the present invention can effectively inhibit the cell death caused by SARS-COV-2 infection of Vero E6 cells, indicating that the compound of the present invention can effectively inhibit the replication of SARS-COV-2 virus in cells.
实验例3:化合物对Vero E6细胞的毒性实验Experimental Example 3: Toxicity test of compounds on Vero E6 cells
(1)实验方法(1) Experimental method
使用Vero E6细胞进行化合物的细胞毒性评估。具体实验方案是:将Vero E6细胞以细胞密度为2×10 4细胞/孔,100μL/孔接种在96孔板内,于37℃,5%CO2培养箱中培育过夜。次日,每孔加入200μL含药培养基,化合物以200μM为初始浓度,5倍梯度稀释,共6个梯度,每个浓度设置3个重复孔,每组实验设置不含药物的阴性对照和空白对照。药物处理72h后,使用CCK-8试剂盒检测细胞活力,计算化合物对Vero E6细胞的毒性和细胞半数毒性浓度(CC 50)值。所有实验数据均采用GraphPad Prism软件进行分析。 Cytotoxicity assessment of compounds was performed using Vero E6 cells. The specific experimental protocol is as follows: Vero E6 cells were seeded in a 96-well plate at a cell density of 2×10 4 cells/well, 100 μL/well, and incubated overnight at 37° C. in a 5% CO2 incubator. The next day, 200 μL of drug-containing medium was added to each well. The compound was initially diluted at 200 μM, with a 5-fold gradient dilution. There were 6 gradients in total. Three replicate wells were set for each concentration. Each group of experiments set a negative control and blank without drug. control. After 72 hours of drug treatment, the cell viability was detected by using the CCK-8 kit, and the toxicity of the compound to Vero E6 cells and the cytotoxicity concentration (CC 50 ) value were calculated. All experimental data were analyzed using GraphPad Prism software.
(2)实验结果(2) Experimental results
表4本发明化合物对Vero E6细胞的毒性Table 4 Toxicity of the compounds of the present invention to Vero E6 cells
化合物compound CC 50(μM) CC 50 (μM)
11 >200>200
22 >200>200
33 >200>200
44 >200>200
55 >200>200
66 >200>200
77 >200>200
88 >200>200
99 >200>200
1010 >200>200
1111 >200>200
1212 >200>200
1313 >200>200
1414 >200>200
1515 >200>200
1616 >200>200
1717 >200>200
1818 >200>200
1919 >200>200
2020 >200>200
21twenty one >200>200
22twenty two >200>200
23twenty three >200>200
24twenty four >200>200
2525 >200>200
2626 >200>200
2727 >200>200
2828 >200>200
2929 >200>200
3030 >200>200
3131 >200>200
3232 >200>200
3333 >200>200
3434 >200>200
3535 >200>200
3636 >200>200
3737 >200>200
3838 >200>200
3939 >200>200
4040 >200>200
4141 >200>200
4242 >200>200
4343 >200>200
4444 >200>200
4646 >200>200
4747 >200>200
4848 >200>200
4949 >200>200
5050 >200>200
5151 >200>200
5252 >200>200
5353 >200>200
5454 >200>200
5555 >200>200
5656 >200>200
5757 >200>200
5858 >200>200
5959 >200>200
6060 >200>200
6161 >200>200
6262 >200>200
6363 >200>200
6464 >200>200
6565 >200>200
6666 >200>200
6767 >200>200
6868 >200>200
6969 >200>200
7070 >200>200
7171 >200>200
7272 >200>200
7373 >200>200
7474 >200>200
7575 >200>200
7676 >200>200
7777 >200>200
7878 >200>200
从表4可以看出,本发明的化合物对Vero E6细胞的毒性很低。As can be seen from Table 4, the compounds of the present invention have very low toxicity to Vero E6 cells.
实验例4:化合物对SARS-COV-2在人肺泡上皮细胞中复制的抑制实验Experimental Example 4: Inhibition experiment of compounds on the replication of SARS-COV-2 in human alveolar epithelial cells
(1)实验方法(1) Experimental method
对于RT-qPCR方法,将人肺泡上皮细胞以8×10 5个细胞/孔的密度接种到48孔板(200μL/孔)中,并生长过夜。然后用病毒感染(MOI=0.01)和不同浓度的化合物处理细胞。在37℃下孵育1小时后,将含有病毒-药物混合物的培养基除去,并用含有化合物的新鲜培养基替换。继续孵育48小时后,收集细胞上清液提取病毒RNA,将其进行RT-qPCR定量分析并计算药物对病毒复制的抑制率和EC 50值。EC 50值是使用GraphPad Prism 8.0软件中的剂量反应模型计算的,实验设置2个独立重复。 For the RT-qPCR method, human alveolar epithelial cells were seeded into 48-well plates (200 μL/well) at a density of 8×10 5 cells/well and grown overnight. Cells were then treated with virus infection (MOI=0.01) and various concentrations of compound. After 1 hour incubation at 37°C, the medium containing the virus-drug mixture was removed and replaced with fresh medium containing the compound. After 48 hours of incubation, the cell supernatant was collected to extract viral RNA, which was quantitatively analyzed by RT-qPCR and the inhibitory rate and EC 50 value of the drug on viral replication were calculated. EC50 values were calculated using a dose-response model in GraphPad Prism 8.0 software, and the experiment was set up with 2 independent replicates.
(2)实验结果(2) Experimental results
测试结果如图4所示,化合物14、15、26、43、44和45均在人肺泡上皮细胞中表现出纳摩尔级的抑制SARS-COV-2复制的活性,优于已报道的活性最高的SARS-COV-2M pro抑制剂11b(Dai et al.,2020,Science.368(6497):1331-1335)和GC376(Ma et al.,2020,Cell Res.30(8):678-692)在同样测试条件下的抗病毒活性(11b,EC 50=23.6nM;GC376,EC 50=151.3nM)。 The test results are shown in Figure 4. Compounds 14, 15, 26, 43, 44, and 45 all exhibited nanomolar activity in inhibiting the replication of SARS-COV-2 in human alveolar epithelial cells, which was better than the highest reported activity. SARS-COV-2M pro inhibitor 11b (Dai et al., 2020, Science. 368(6497): 1331-1335) and GC376 (Ma et al., 2020, Cell Res. 30(8): 678-692) Antiviral activity under the same test conditions (11b, EC50 =23.6 nM; GC376, EC50 =151.3 nM).
实验例5:噬斑法评价化合物抗SARS-COV-2活性(Vero E6细胞)Experimental Example 5: Plaque assay to evaluate compound anti-SARS-COV-2 activity (Vero E6 cells)
(1)实验方法(1) Experimental method
使用噬斑法评价化合物3和39在Vero E6细胞中的抗SARS-COV-2活性。Vero E6以每孔1.0×10 5个接种于24孔细胞培养板中,37℃培养过夜后备用。加入梯度稀释的药物后,加入SARS-CoV-2感染细胞,MOI约为0.002。置于37℃细胞培养箱培养1小时后,去掉含药感染上清,PBS洗一遍,加入含有不同浓度药物的羧甲基纤维素钠0.5mL,羧甲基纤维素钠终浓度为0.9%,置于37℃细胞培养箱培养72小时。用20%的甲醛固定2小时,加入0.5%的结晶紫染色20分钟后,晾干拍照,观察空斑大小并记录空斑数目。实验设空白对照孔(正常细胞),病毒对照孔,阳性药物对照孔。 The anti-SARS-COV-2 activity of compounds 3 and 39 in Vero E6 cells was evaluated using the plaque assay. Vero E6 was seeded in a 24-well cell culture plate at 1.0×10 5 cells per well, and incubated overnight at 37°C for use. After adding the serially diluted drug, SARS-CoV-2 infected cells were added, and the MOI was about 0.002. After culturing in a 37°C cell incubator for 1 hour, the drug-containing infection supernatant was removed, washed with PBS, and 0.5 mL of sodium carboxymethyl cellulose containing different concentrations of drugs was added, and the final concentration of sodium carboxymethyl cellulose was 0.9%. Placed in a 37°C cell incubator for 72 hours. Fix with 20% formaldehyde for 2 hours, add 0.5% crystal violet to stain for 20 minutes, dry and take pictures, observe the size of plaques and record the number of plaques. The experiment set blank control wells (normal cells), virus control wells, and positive drug control wells.
计算公式:抑制率(%)=(病毒对照孔空斑数-样品孔空斑数)/病毒对照孔空斑数*100Calculation formula: inhibition rate (%) = (number of plaques in virus control wells - number of plaques in sample wells)/number of plaques in virus control wells*100
计算所得的细胞活性和抑制率,用Graphpad Prism8计算EC 50(半数起效浓度)值。 The resulting cell viability and inhibition rates were calculated, and EC50 (half effective concentration) values were calculated using Graphpad Prism8.
(2)实验结果(2) Experimental results
表5小分子化合物对SARS-CoV-2的抑制作用Table 5 Inhibitory effects of small molecule compounds on SARS-CoV-2
化合物名称Compound name EC 50(μM) EC50 (μM)
33 0.240.24
3939 1.201.20
Remdesivir(瑞德西韦)Remdesivir (Remdesivir) 0.690.69
实验结果如表5所示,本发明化合物可以有效抑制Vero E6细胞中SARS-COV-2感染;特别是化合物3,EC 50为0.2373μM,活性优于阳性对照瑞德西韦(EC 50为0.692μM)。 The experimental results are shown in Table 5. The compounds of the present invention can effectively inhibit SARS-COV-2 infection in Vero E6 cells; in particular, compound 3 has an EC 50 of 0.2373 μM, and its activity is better than that of the positive control Remdesivir (EC 50 of 0.692 μM).
实验例6:化合物对大鼠的体内药代动力学特性评估Experimental Example 6: Evaluation of in vivo pharmacokinetic properties of compounds in rats
(1)给药方案(1) Dosing schedule
雄性Sprague-Dawley(SD)大鼠60只,体重200-230g,随机分成3组,每组3只。按照如下表6方案分别灌胃(p.o.)、静脉(i.v.)和腹腔(i.p.)给予系列受试化合物。实验前禁食12h,自由饮水。给药后2h统一进食。60 male Sprague-Dawley (SD) rats, weighing 200-230 g, were randomly divided into 3 groups with 3 rats in each group. The series of test compounds were administered by gavage (p.o.), intravenous (i.v.) and intraperitoneal (i.p.), respectively, according to the protocol in Table 6 below. They were fasted for 12 h before the experiment and had free access to water. 2h after the administration of unified food.
灌胃、静脉和腹腔给药溶液以DMSO/HS15/NaCl(5/3/92,v/v/v)配制。按表6所示给药剂量给予药物,记录给药时间,并在以上设定的时间点经颈静脉采血或其他合适方式,每个样品采集约0.20mL,肝素钠抗凝,采集后放置冰上。并于1小时之内离心分离血浆(离心条件:6800g,6分钟,2-8℃)。血浆样本在分析前存放时则放于-80℃冰箱内。分组及采血时间点见表6,每个时间点3只动物。Gavage, intravenous and intraperitoneal administration solutions were formulated in DMSO/HS15/NaCl (5/3/92, v/v/v). Administer the drug according to the dosage shown in Table 6, record the administration time, and collect blood through the jugular vein at the time set above or other suitable methods. Each sample is collected about 0.20mL, heparin sodium is anticoagulated, and placed on ice after collection. superior. Plasma was centrifuged within 1 hour (centrifugation conditions: 6800g, 6 minutes, 2-8°C). Plasma samples were stored in a -80°C freezer prior to analysis. The grouping and blood collection time points are shown in Table 6, with 3 animals at each time point.
表6化合物对大鼠的体内药代动力学特性评估实验方案Table 6 Experimental protocol for evaluating the in vivo pharmacokinetic properties of compounds in rats
Figure PCTCN2021076400-appb-000059
Figure PCTCN2021076400-appb-000059
(2)实验结果(2) Experimental results
表7化合物的主要药动学参数The main pharmacokinetic parameters of the compounds in Table 7
Figure PCTCN2021076400-appb-000060
Figure PCTCN2021076400-appb-000060
Figure PCTCN2021076400-appb-000061
Figure PCTCN2021076400-appb-000061
结果如表7所示。本发明对化合物3,14,15,26,39,40,43,44和45进行了药代动力学研究。其中,化合物3的口服暴露量为2293h*ng/mL,生物利用度为55.1%。化合物14的腹腔暴露量为11581h*ng/mL,生物利用度为78.0%;口服暴露量为1665h*ng/mL,生物利用度为11.2%。化合物15的腹腔注射给药暴露量为12166h*ng/mL,生物利用度为62.3%;口服暴露量为2843h*ng/mL,生物利用度为14.6%。化合物26的口服暴露量为842h*ng/mL,生物利用度为7.2%。 化合物39的口服暴露量为14586h*ng/mL,生物利用度为14.7%。化合物40的口服暴露量为2888h*ng/mL,生物利用度为22.1%。化合物43的口服暴露量为258h*ng/mL,生物利用度为4.8%。化合物44的口服暴露量为381h*ng/mL,生物利用度为4.1%。化合物45的口服暴露量为968h*ng/mL,生物利用度为5.1%。The results are shown in Table 7. Pharmacokinetic studies of compounds 3, 14, 15, 26, 39, 40, 43, 44 and 45 were carried out in the present invention. Among them, the oral exposure of compound 3 was 2293h*ng/mL, and the bioavailability was 55.1%. The intraperitoneal exposure of compound 14 was 11581h*ng/mL, and the bioavailability was 78.0%; the oral exposure was 1665h*ng/mL, and the bioavailability was 11.2%. The exposure of compound 15 by intraperitoneal injection was 12166h*ng/mL, and the bioavailability was 62.3%; the oral exposure was 2843h*ng/mL, and the bioavailability was 14.6%. The oral exposure of compound 26 was 842 h*ng/mL, and the bioavailability was 7.2%. The oral exposure of compound 39 was 14586 h*ng/mL, and the bioavailability was 14.7%. The oral exposure of compound 40 was 2888h*ng/mL, and the bioavailability was 22.1%. The oral exposure of compound 43 was 258 h*ng/mL, and the bioavailability was 4.8%. The oral exposure of compound 44 was 381 h*ng/mL and the bioavailability was 4.1%. The oral exposure of compound 45 was 968 h*ng/mL, and the bioavailability was 5.1%.
实验结果表明,本发明化合物在大鼠的体内具有良好的药代动力学性质。The experimental results show that the compounds of the present invention have good pharmacokinetic properties in rats.
实验例7:化合物对大鼠的体内安全性的初步评价Experimental Example 7: Preliminary evaluation of the in vivo safety of the compound in rats
(1)实验方法(1) Experimental method
将化合物溶解在5%(v/v)DMSO(Sigma-Aldrich),3%(v/v)HS15(GLPBIO)和92%生理盐水中。SPF SD大鼠(年龄:7-11周)雌190-220克)雄(体重200-230克)各半。按表8的给药方案进行试验,并对所有动物进行临床观察。并在实验结束时,收集心脏,肝,脾,肺,肾和给药部位的样品。试验结果如表8所示。Compounds were dissolved in 5% (v/v) DMSO (Sigma-Aldrich), 3% (v/v) HS15 (GLPBIO) and 92% saline. SPF SD rats (age: 7-11 weeks) were divided into half females (190-220 g) and males (weight 200-230 g). Experiments were carried out according to the dosing schedule in Table 8, and clinical observations were performed on all animals. And at the end of the experiment, samples of heart, liver, spleen, lung, kidney and administration site were collected. The test results are shown in Table 8.
(2)实验结果(2) Experimental results
表8对大鼠的体内安全性的初步评价Table 8 Preliminary evaluation of in vivo safety in rats
Figure PCTCN2021076400-appb-000062
Figure PCTCN2021076400-appb-000062
实验结果显示,本发明化合物对大鼠的体内安全性良好。The experimental results show that the compounds of the present invention have good in vivo safety in rats.
实验例8:化合物对转基因小鼠的体内抗SARS-COV-2感染的活性研究Experimental Example 8: Study on the activity of compounds against SARS-COV-2 infection in vivo in transgenic mice
(1)实验方案(1) Experimental scheme
人源化血管紧张素转化酶2(ACE2)转基因小鼠(年龄:8-10周)购自江苏集萃药康生物科技有限公司(#T037659。将化合物溶于5%(v/v)DMSO(Sigma-Aldrich),3%(v/v)HS15(GLPBIO)和92%生理盐水中。按表9的试验方案进行SARS-CoV-2(stain107)滴鼻感染和给药。观察所有小鼠并每天监测其体重直至处死。病毒感染后第1(1dpi)、3(3dpi)和5(5dpi)天,收集肺组织(n=3,每个dpi组)用于病毒载量检测、H&E组织病理学分析、代表性炎性细胞因子和趋化因子测定及炎性细胞(中性粒细胞和巨噬细胞)计数。Humanized angiotensin-converting enzyme 2 (ACE2) transgenic mice (age: 8-10 weeks) were purchased from Jiangsu Jicui Yaokang Biotechnology Co., Ltd. (#T037659. Compounds were dissolved in 5% (v/v) DMSO ( Sigma-Aldrich), 3% (v/v) HS15 (GLPBIO) and 92% saline. SARS-CoV-2 (stain107) intranasal infection and administration were performed according to the experimental protocol in Table 9. All mice were observed and Body weights were monitored daily until sacrificed. On days 1 (1 dpi), 3 (3 dpi) and 5 (5 dpi) after viral infection, lung tissues (n=3, each dpi group) were collected for viral load detection, H&E histopathology Physical analysis, representative inflammatory cytokine and chemokine assays and inflammatory cell (neutrophil and macrophage) counts.
表9化合物对转基因小鼠体内抗SARS-COV-2感染的活性研究方案Table 9 Study protocol for the activity of compounds against SARS-COV-2 infection in transgenic mice
Figure PCTCN2021076400-appb-000063
Figure PCTCN2021076400-appb-000063
肺部病毒载量检测的具体实验方案是:使用TRIzol TM试剂(Invitrogen)从肺组织中提取RNA,并使用
Figure PCTCN2021076400-appb-000064
一步法qRT-PCR试剂盒(Toyobo)对病毒RNA进行定量,结果表示为每微克组织的病毒RNA的拷贝数。
The specific experimental protocol for lung viral load detection was: RNA was extracted from lung tissue using TRIzol reagent (Invitrogen), and the
Figure PCTCN2021076400-appb-000064
Viral RNA was quantified by a one-step qRT-PCR kit (Toyobo) and the results were expressed as copies of viral RNA per microgram of tissue.
肺部组织病理学分析的具体实验方案是:将肺部组织用4%多聚甲醛固定至少7天,包埋在石蜡中并切成3μm的切片。将切片用苏木精和曙红(H&E)染色,并通过光学显微镜进行分析。根据组织学特征(肺泡间隔增厚,出血,炎性细胞浸润等)评估肺损伤。The specific experimental protocol for lung histopathological analysis was: lung tissue was fixed with 4% paraformaldehyde for at least 7 days, embedded in paraffin and cut into 3 μm sections. Sections were stained with hematoxylin and eosin (H&E) and analyzed by light microscopy. Lung injury was assessed according to histological features (thickening of alveolar septa, hemorrhage, inflammatory cell infiltration, etc.).
肺部代表性炎性细胞因子和趋化因子测定的具体实施方案是:使用PrimeScript TMRT试剂盒(Takara),将从肺部提取的RNA反转录为cDNA,然后通过
Figure PCTCN2021076400-appb-000065
Ex Taq TMII(TliRNaseH Plus)(Takara)和ViiA TM定量基因表达。表10中显示了用于定量炎性基因表达的引物序列。
A specific embodiment of a representative inflammatory cytokine and chemokine assay in the lung is: using the PrimeScript RT kit (Takara), RNA extracted from the lungs was reverse transcribed into cDNA and then analyzed by
Figure PCTCN2021076400-appb-000065
Ex Taq II (TliRNaseH Plus) (Takara) and ViiA quantified gene expression. Primer sequences used to quantify inflammatory gene expression are shown in Table 10.
表10测定代表性炎性细胞因子和趋化因子的引物序列Table 10 Primer sequences for the determination of representative inflammatory cytokines and chemokines
Figure PCTCN2021076400-appb-000066
Figure PCTCN2021076400-appb-000066
Figure PCTCN2021076400-appb-000067
Figure PCTCN2021076400-appb-000067
肺部测定炎性细胞(中性粒细胞和巨噬细胞)数量的具体实施方案是:将小鼠肺部组织在4%多聚甲醛中固定至少7天,然后按照标准程序将石蜡包埋并切成4μm切片。在二甲苯中进行去石蜡,抗原回收和封闭后,将肺切片与大鼠单克隆抗体F4/80(Huabio,1:100)或兔多克隆抗体Ly6G(Servicebio,1:300)在4℃孵育过夜,然后与辣根过氧化物酶(HRP)偶联的山羊抗大鼠二抗或HRP偶联的山羊抗兔二抗在室温下反应1小时,以根据酪酰胺信号放大(TSA)催化Cy3-酪胺和Cy5-酪胺并放大染色信号。用DAPI对细胞核染色后,所有切片均使用LEICA DMI 4000B显微镜(德国)拍照,并通过ImageJ软件(美国NIH)和FlowJo软件(美国BD)进行分析。为了半定量地测量巨噬细胞和嗜中性白细胞的浸润,通过光学显微镜检查每个肺切片中5个任意选择的肺实质区域,以观察嗜中性白细胞或巨噬细胞的存在。该评估以盲法进行。每只动物的累积得分表示为每100个视野的阳性视野数(%)。A specific embodiment for the determination of inflammatory cells (neutrophils and macrophages) in the lungs is performed by fixing mouse lung tissue in 4% paraformaldehyde for at least 7 days, then paraffin-embedding according to standard procedures. Cut into 4 μm sections. After deparaffinization in xylene, antigen retrieval and blocking, lung sections were incubated with rat monoclonal antibody F4/80 (Huabio, 1:100) or rabbit polyclonal antibody Ly6G (Servicebio, 1:300) at 4°C Overnight, then reacted with horseradish peroxidase (HRP)-conjugated goat anti-rat secondary antibody or HRP-conjugated goat anti-rabbit secondary antibody for 1 hour at room temperature to catalyze Cy3 according to tyramide signal amplification (TSA) -Tyramine and Cy5-tyramine and amplify the staining signal. After nuclei were stained with DAPI, all sections were photographed using a LEICA DMI 4000B microscope (Germany) and analyzed by ImageJ software (NIH, USA) and FlowJo software (BD, USA). To semiquantitatively measure macrophage and neutrophil infiltration, 5 randomly selected areas of lung parenchyma in each lung section were examined by light microscopy for the presence of neutrophils or macrophages. This assessment was performed in a blinded fashion. The cumulative score for each animal is expressed as the number (%) of positive fields per 100 fields.
上述实验以安慰剂作为对照。该安慰剂为与受试药物剂型相同、但是不含药物活性成分的制剂。The above experiments used a placebo as a control. The placebo is a formulation in the same dosage form as the test drug, but without the active pharmaceutical ingredient.
(2)实验结果(2) Experimental results
肺部病毒载量检测实验结果如图5所示,口服和腹腔给予化合物14及腹腔给予化合物15均可以有效降低SARS-COV-2感染的转基因小鼠肺部的病毒载量。The results of the lung viral load detection experiment are shown in Figure 5. Both oral and intraperitoneal administration of compound 14 and intraperitoneal administration of compound 15 can effectively reduce the viral load in the lungs of transgenic mice infected with SARS-COV-2.
肺部组织病理学分析实验结果如图6所示,口服和腹腔给予化合物14及腹腔给予化合物15均可以有效改善SARS-COV-2感染的转基因小鼠肺部的病理损伤。The experimental results of lung histopathological analysis are shown in Figure 6. Oral and intraperitoneal administration of compound 14 and intraperitoneal administration of compound 15 can effectively improve the pathological damage of the lungs of SARS-COV-2 infected transgenic mice.
肺部代表性炎性细胞因子和趋化因子测定实验结果如图7所示,口服和腹腔给予化合物14及腹腔给予化合物15可以有效降低肺部趋化因子配体10(CXCL10)和β型干扰素(IFN-β)的基因表达水平。The representative inflammatory cytokine and chemokine assay results in the lungs are shown in Figure 7. Oral and intraperitoneal administration of compound 14 and intraperitoneal administration of compound 15 can effectively reduce lung chemokine ligand 10 (CXCL10) and β-type interference Gene expression level of IFN-β.
肺部测定炎性细胞(中性粒细胞和巨噬细胞)数量的实验结果如 图8所示,口服和腹腔给予化合物14及腹腔给予化合物15均可以有效降低SARS-COV-2感染的转基因小鼠肺部的中性粒细胞(NEU)和巨噬细胞(MAC)的数量。The results of the experiment to determine the number of inflammatory cells (neutrophils and macrophages) in the lungs are shown in Figure 8. Both oral and intraperitoneal administration of compound 14 and intraperitoneal administration of compound 15 can effectively reduce the transgenic cells infected by SARS-COV-2. Number of neutrophils (NEU) and macrophages (MAC) in murine lungs.
实验结果表明,本发明化合物能够有效抵抗转基因小鼠的体内SARS-COV-2感染。The experimental results show that the compounds of the present invention can effectively resist SARS-COV-2 infection in vivo in transgenic mice.
综上,本发明提供了一种式I所示的新型冠状病毒主蛋白酶抑制剂及其制备方法和用途。式I所示化合物能够有效抑制SARS-CoV-2M pro活性,可以用来制备SARS-CoV-2M pro抑制剂,阻断SARS-CoV-2病毒在患者体内的复制和转录。本发明的化合物在制备SARS-CoV-2M pro抑制剂,抗SARS-CoV-2的药物,以及预防和/或治疗新型冠状病毒肺炎的药物中具有非常好的应用前景。 To sum up, the present invention provides a novel coronavirus main protease inhibitor represented by formula I and a preparation method and application thereof. The compound represented by formula I can effectively inhibit the activity of SARS-CoV-2M pro , and can be used to prepare a SARS-CoV-2M pro inhibitor to block the replication and transcription of SARS-CoV-2 virus in patients. The compounds of the present invention have very good application prospects in the preparation of SARS-CoV-2 M pro inhibitors, anti-SARS-CoV-2 drugs, and drugs for preventing and/or treating novel coronavirus pneumonia.

Claims (10)

  1. 式I所示化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式:The compound shown in formula I, or its pharmaceutically acceptable salt, or its stereoisomer, or its optical isomer, or its isotopic substitution form:
    Figure PCTCN2021076400-appb-100001
    Figure PCTCN2021076400-appb-100001
    其中,X为O或S;Wherein, X is O or S;
    A环选自未取代或被一个或多个R 6取代的以下基团:5~6元饱和杂环基、5~6元不饱和杂环基、饱和杂稠环基、不饱和杂稠环基;R 6各自独立的选自C 1~6烷基、C 1~6烷氧基、卤素、羟基、氰基、氨基、羧基; Ring A is selected from the following groups unsubstituted or substituted by one or more R 6 : 5-6 membered saturated heterocyclyl, 5-6 membered unsaturated heterocyclyl, saturated heterofused ring, unsaturated heterofused ring group; R 6 is independently selected from C 1-6 alkyl, C 1-6 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
    R 3为L 3M 0L 4R 3a;其中L 3选自无、C 1~4亚烷基、卤代C 1~4亚烷基、C 2~4亚烯基、卤代C 2~4亚烯基,L 4选自无、C 1~4亚烷基、卤代C 1~4亚烷基,M 0选自无、O、S、NH、CO、CONH、NHCO,R 3a为未取代或被一个或多个R 3b取代的以下基团:5~6元芳基、5~6元杂芳基、不饱和杂稠环基、不饱和稠环烷基;R 3b各自独立的选自被R 3c取代或未取代的C 1~5烷基、被R 3c取代或未取代的C 1~5烷氧基、卤素、被R 3c取代或未取代的苯基、NR 14R 15、被R 3c取代或未取代的萘基、羟基;R 14、R 15各自独立的选自氢或C 1~5烷基,R 3c各自独立的选自卤素、氘、氰基、羟基、氨基、羧基; R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-4 alkenylene, halogenated C 2- 4 alkenylene, L 4 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is The following groups are unsubstituted or substituted by one or more R 3b : 5-6 membered aryl, 5-6 membered heteroaryl, unsaturated heterofused ring group, unsaturated fused ring alkyl; R 3b are each independently Selected from C 1-5 alkyl substituted or unsubstituted by R 3c , C 1-5 alkoxy substituted or unsubstituted by R 3c , halogen, phenyl substituted or unsubstituted by R 3c , NR 14 R 15 , substituted or unsubstituted naphthyl and hydroxyl by R 3c ; R 14 and R 15 are each independently selected from hydrogen or C 1-5 alkyl, and R 3c is independently selected from halogen, deuterium, cyano, hydroxyl, amino ,carboxyl;
    R 4选自未取代或被一个或多个取代基取代的以下基团:5~6元芳基、5~6元杂芳基、C 1~5烷基、COOR 10;所述取代基各自独立的选自=O、羟基、硝基、氨基、羧基、卤素、C 1~5烷基;R 10为C 1~5烷基; R 4 is selected from the following groups unsubstituted or substituted by one or more substituents: 5-6 membered aryl, 5-6 membered heteroaryl, C 1-5 alkyl, COOR 10 ; the substituents are each independently selected from =O, hydroxyl, nitro, amino, carboxyl, halogen, C 1-5 alkyl; R 10 is C 1-5 alkyl;
    R 5选自COR 8或WCOOR 7;其中,R 8选自氢或
    Figure PCTCN2021076400-appb-100002
    W选自无、C 1~4亚烷基、C 2~4亚烯基、C 2~4亚炔基,R 7选自C 1~6烷基;M选自无、CO、NH、CONH、NHCO、COO或OCO,L 0选自无、C 1~4亚烷基、C 2~4亚烯基,L 1选自无、C 1~4亚烷基、C 2~4亚烯基,R 8a选自C 1~5烷基、卤代的C 1~5烷基、3~6元饱和环烷基、3~6元饱和杂环基、5~6元芳基或5~6元杂芳基。
    R 5 is selected from COR 8 or WCOOR 7 ; wherein, R 8 is selected from hydrogen or
    Figure PCTCN2021076400-appb-100002
    W is selected from none, C 1-4 alkylene, C 2-4 alkenylene, C 2-4 alkynylene, R 7 is selected from C 1-6 alkyl; M is selected from none, CO, NH, CONH , NHCO, COO or OCO, L 0 is selected from none, C 1-4 alkylene, C 2-4 alkenylene, L 1 is selected from none, C 1-4 alkylene, C 2-4 alkenylene , R 8a is selected from C 1-5 alkyl, halogenated C 1-5 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, 5-6 membered aryl or 5-6 membered aryl Yuan Heteroaryl.
  2. 根据权利要求1所述的化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式,其特征在于:所述化合物的结构如式II、式III或式IV所示:The compound according to claim 1, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substitution form thereof, characterized in that: the structure of the compound is as shown in formula II , formula III or formula IV:
    Figure PCTCN2021076400-appb-100003
    Figure PCTCN2021076400-appb-100003
    其中,X为O或S;Wherein, X is O or S;
    n选自0~3的整数,优选为0~2的整数;n is selected from an integer of 0-3, preferably an integer of 0-2;
    R 1、R 2各自独立的选自氢、C 1~5烷基、C 1~5烷氧基、卤素、羟基、氰基、氨基、羧基; R 1 and R 2 are each independently selected from hydrogen, C 1-5 alkyl, C 1-5 alkoxy, halogen, hydroxyl, cyano, amino, and carboxyl;
    R 3为L 3M 0L 4R 3a;其中L 3选自无、C 1~4亚烷基、卤代C 1~4亚烷基、C 2~3亚烯基,L 4选自无、C 1~4亚烷基、卤代C 1~4亚烷基,M 0选自无、O、S、NH、CO、CONH、NHCO,R 3a为未取代或被一个或多个R 3b取代的以下基团:苯基、
    Figure PCTCN2021076400-appb-100004
    Figure PCTCN2021076400-appb-100005
    R 3b各自独立的选自C 1~4烷基、卤素取代的C 1~4烷基、氘代的C 1~4烷基、氰基取代的C 1~4烷基、C 1~4烷氧基、卤素取代的C 1~4烷氧基、氘代的C 1~4烷氧基、氰基取代的C 1~4烷氧基、卤素、苯基、卤代的苯基、 NR 14R 15
    Figure PCTCN2021076400-appb-100006
    羟基,R 14、R 15各自独立的选自氢或C 1~4烷基;
    R 3 is L 3 M 0 L 4 R 3a ; wherein L 3 is selected from none, C 1-4 alkylene, halogenated C 1-4 alkylene, C 2-3 alkenylene, and L 4 is selected from none , C 1-4 alkylene, halogenated C 1-4 alkylene, M 0 is selected from none, O, S, NH, CO, CONH, NHCO, R 3a is unsubstituted or by one or more R 3b Substituted the following groups: phenyl,
    Figure PCTCN2021076400-appb-100004
    Figure PCTCN2021076400-appb-100005
    R 3b are each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkyl Oxyl, halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR 14 R 15 ,
    Figure PCTCN2021076400-appb-100006
    Hydroxyl, R 14 and R 15 are each independently selected from hydrogen or C 1-4 alkyl;
    R 4选自未取代或被一个或多个取代基取代的以下基团:5~6元芳基、5~6元杂芳基、C 1~5烷基、COOR 10;所述取代基各自独立的选自=O、羟基、硝基、氨基、羧基、卤素、C 1~5烷基;R 10为C 1~5烷基; R 4 is selected from the following groups unsubstituted or substituted by one or more substituents: 5-6 membered aryl, 5-6 membered heteroaryl, C 1-5 alkyl, COOR 10 ; the substituents are each independently selected from =O, hydroxyl, nitro, amino, carboxyl, halogen, C 1-5 alkyl; R 10 is C 1-5 alkyl;
    R 8选自氢或
    Figure PCTCN2021076400-appb-100007
    M选自无、CO、NH、CONH、NHCO、COO或OCO,L 0选自无、C 1~3亚烷基、C 2~4亚烯基,L 1选自无、C 1~3亚烷基、C 2~4亚烯基,R 8a选自C 1~4烷基、卤代的C 1~4烷基、3~6元饱和环烷基、3~6元饱和杂环基、5~6元芳基或5~6元杂芳基。
    R 8 is selected from hydrogen or
    Figure PCTCN2021076400-appb-100007
    M is selected from None, CO, NH, CONH, NHCO, COO or OCO, L 0 is selected from None, C 1-3 alkylene, C 2-4 alkenylene, L 1 is selected from None, C 1-3 alkylene Alkyl, C 2-4 alkenylene, R 8a is selected from C 1-4 alkyl, halogenated C 1-4 alkyl, 3-6 membered saturated cycloalkyl, 3-6 membered saturated heterocyclic group, A 5- to 6-membered aryl group or a 5- to 6-membered heteroaryl group.
  3. 根据权利要求2所述的化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式,其特征在于:The compound according to claim 2, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substituted form thereof, is characterized in that:
    R 1、R 2各自独立的选自氢、C 1~4烷基、C 1~4烷氧基、卤素、羟基; R 1 and R 2 are each independently selected from hydrogen, C 1-4 alkyl, C 1-4 alkoxy, halogen, and hydroxyl;
    R 3选自
    Figure PCTCN2021076400-appb-100008
    Figure PCTCN2021076400-appb-100009
    L 3M 0L 4R 3a;L 3选自无、C 1~3亚烷基、卤代C 1~3亚烷基、C 2~3亚烯基,L 4选自无、C 1~3亚烷基、卤代C 1~3亚烷基、,M 0选自无、O、NH、CO、CONH,R 3a为苯基、被一个或多个R 3b取代的苯基,R 3b各自独立的选自C 1~4烷基、卤素取代的C 1~4烷基、氘代的C 1~4烷基、氰基取代的C 1~4烷基、C 1~4烷氧基、卤素取代的C 1~4烷氧基、氘代的C 1~4烷氧基、氰基取代的C 1~4烷氧基、卤素、苯基、卤代的苯基、NR 14R 15
    Figure PCTCN2021076400-appb-100010
    羟基,R 14、R 15各自独立的选自氢或C 1~3烷基;
    R 3 is selected from
    Figure PCTCN2021076400-appb-100008
    Figure PCTCN2021076400-appb-100009
    L 3 M 0 L 4 R 3a ; L 3 is selected from none, C 1-3 alkylene, halogenated C 1-3 alkylene, C 2-3 alkenylene, L 4 is selected from none, C 1-3 3 alkylene, halogenated C 1-3 alkylene, M 0 is selected from none, O, NH, CO, CONH, R 3a is phenyl, phenyl substituted by one or more R 3b , R 3b Each independently selected from C 1-4 alkyl, halogen-substituted C 1-4 alkyl, deuterated C 1-4 alkyl, cyano-substituted C 1-4 alkyl, C 1-4 alkoxy , halogen-substituted C 1-4 alkoxy, deuterated C 1-4 alkoxy, cyano-substituted C 1-4 alkoxy, halogen, phenyl, halogenated phenyl, NR 14 R 15 ,
    Figure PCTCN2021076400-appb-100010
    Hydroxyl, R 14 and R 15 are each independently selected from hydrogen or C 1-3 alkyl;
    R 4选自
    Figure PCTCN2021076400-appb-100011
    C 1~2烷基、COOR 10、取代或未取代的苯基;所述取代基选自羟基、硝基;R a1、R a2各自独立的选自氢、C 1~3烷基、卤素;R 10为C 1~3烷基;
    R 4 is selected from
    Figure PCTCN2021076400-appb-100011
    C 1-2 alkyl, COOR 10 , substituted or unsubstituted phenyl; the substituent is selected from hydroxyl, nitro; R a1 and R a2 are independently selected from hydrogen, C 1-3 alkyl, halogen; R 10 is C 1-3 alkyl;
    R 8选自氢、CONHR 11、L 2COOR 12、C 1~4烷基、卤代的C 1~4烷基; R 8 is selected from hydrogen, CONHR 11 , L 2 COOR 12 , C 1-4 alkyl, halogenated C 1-4 alkyl;
    R 11选自3~6元饱和环烷基、C 1~4烷基、苄基、
    Figure PCTCN2021076400-appb-100012
    L 2为C 1~2亚烷基、C 2~3亚烯基,R 12为C 1~3烷基。
    R 11 is selected from 3-6 membered saturated cycloalkyl, C 1-4 alkyl, benzyl,
    Figure PCTCN2021076400-appb-100012
    L 2 is a C 1-2 alkylene group, a C 2-3 alkenylene group, and R 12 is a C 1-3 alkyl group.
  4. 根据权利要求3所述的化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式,其特征在于:所述式II如式II-1或式II-2所示:The compound according to claim 3, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer, or an isotopic substitution form thereof, wherein the formula II is such as formula II- 1 or as shown in formula II-2:
    Figure PCTCN2021076400-appb-100013
    Figure PCTCN2021076400-appb-100013
    其中,X为O或S,优选为O;Wherein, X is O or S, preferably O;
    R 1、R 2各自独立的选自氢、C 1~3烷基,优选为甲基; R 1 and R 2 are each independently selected from hydrogen, C 1-3 alkyl, preferably methyl;
    m选自0~3的整数,R 3b各自独立的选自苯基、卤代的苯基、卤素、C 1~3烷基、卤代或氘代的C 1~3烷基、C 1~3烷氧基、卤代或氘代的C 1~3烷氧基、羟基; m is selected from an integer from 0 to 3, and R 3b is independently selected from phenyl, halogenated phenyl, halogen, C 1-3 alkyl, halogenated or deuterated C 1-3 alkyl, C 1- 3 alkoxy, halogenated or deuterated C 1-3 alkoxy, hydroxyl;
    R a1、R a2各自独立的选自氢、C 1~3烷基、卤素; R a1 and R a2 are each independently selected from hydrogen, C 1-3 alkyl, and halogen;
    R b选自氢、C 1~3烷基、卤代的C 1~3烷基; R b is selected from hydrogen, C 1-3 alkyl, halogenated C 1-3 alkyl;
    L 3选自无、C 1~2亚烷基、卤代C 1~2亚烷基、C 2亚烯基,L 4选自无、C 1~3亚烷基、卤代C 1~3亚烷基,M 0选自无、O、NH、CO、CONH; L 3 is selected from none, C 1-2 alkylene, halogenated C 1-2 alkylene, C 2 alkenylene, L 4 is selected from none, C 1-3 alkylene, halogenated C 1-3 Alkylene, M 0 is selected from none, O, NH, CO, CONH;
    所述卤素优选为氯、氟。The halogen is preferably chlorine or fluorine.
  5. 根据权利要求1~4任一项所述的化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式,其特征在于:所述化合物的结构为以下结构之一:The compound according to any one of claims 1 to 4, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof, or an isotopic substitution form thereof, wherein the compound is characterized in that: is one of the following structures:
    Figure PCTCN2021076400-appb-100014
    Figure PCTCN2021076400-appb-100014
    Figure PCTCN2021076400-appb-100015
    Figure PCTCN2021076400-appb-100015
    Figure PCTCN2021076400-appb-100016
    Figure PCTCN2021076400-appb-100016
    Figure PCTCN2021076400-appb-100017
    Figure PCTCN2021076400-appb-100017
    Figure PCTCN2021076400-appb-100018
    Figure PCTCN2021076400-appb-100018
    Figure PCTCN2021076400-appb-100019
    Figure PCTCN2021076400-appb-100019
  6. 一种药物组合物,其特征在于:所述药物组合物是以权利要求1~5任一项所述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式为活性成分,加上药学上可接受的辅料制成的制剂。A pharmaceutical composition, characterized in that: the pharmaceutical composition is the compound described in any one of claims 1 to 5, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof The active ingredient, or its isotopic substitute form, is a preparation prepared by adding pharmaceutically acceptable excipients.
  7. 权利要求1~5任一项所述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备冠状病毒蛋白水解酶抑制剂中的用途;优选的,所述冠状病毒蛋白水解酶为冠状病毒主蛋白酶;更优选的,所述冠状病毒蛋白水解酶为SARS-COV-2M proThe compound described in any one of claims 1 to 5, or its pharmaceutically acceptable salt, or its stereoisomer, or its optical isomer, or its isotopic substitution form in the preparation of a coronavirus proteolytic enzyme inhibitor Preferably, the coronavirus proteolytic enzyme is coronavirus main protease; more preferably, the coronavirus proteolytic enzyme is SARS-COV-2M pro .
  8. 权利要求1~5任一项所述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备抗冠状病毒的药物中的用途,优选的,所述冠状病毒为新型冠状病毒SARS-CoV-2。Use of the compound described in any one of claims 1 to 5, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof, or an isotopic substitution form thereof, in the preparation of an anti-coronavirus medicament , preferably, the coronavirus is a novel coronavirus SARS-CoV-2.
  9. 权利要求1~5任一项所述化合物、或其药学上可接受的盐、或其立体异构体、或其旋光异构体、或其同位素替代形式在制备预防和/或治疗与SARS-COV-2M pro相关的疾病的药物中的用途,优选的,所述与SARS-COV-2M pro相关的疾病为新型冠状病毒肺炎COVID-19。 The compound described in any one of claims 1 to 5, or a pharmaceutically acceptable salt thereof, or a stereoisomer thereof, or an optical isomer thereof, or an isotopic substituted form thereof, is used in the preparation of prevention and/or treatment and SARS- The use in medicine for a disease related to COV-2M pro , preferably, the disease related to SARS-COV-2M pro is a new type of coronavirus pneumonia COVID-19.
  10. 根据权利要求7~9任一项所述的用途,其特征在于:所述冠状病毒蛋白水解酶抑制剂、抗冠状病毒的药物或预防和/或治疗病毒性肺炎的药物能够抑制SARS-COV-2M pro的活性和/或能够抑制SARS-COV-2感染细胞。 The use according to any one of claims 7 to 9, wherein the coronavirus proteolytic enzyme inhibitor, anti-coronavirus drug or drug for preventing and/or treating viral pneumonia can inhibit SARS-COV- 2M pro is active and/or capable of inhibiting SARS-COV-2 infection of cells.
PCT/CN2021/076400 2020-07-31 2021-02-09 Novel coronavirus main protease inhibitor, and preparation method therefor and use thereof WO2022021841A1 (en)

Applications Claiming Priority (8)

Application Number Priority Date Filing Date Title
CN202010761283 2020-07-31
CN202010761283.7 2020-07-31
CN202010761302.6 2020-07-31
CN202010761302 2020-07-31
CN202010906398 2020-09-01
CN202010906398.0 2020-09-01
CN202011568282.7A CN114057702B (en) 2020-07-31 2020-12-25 A kind of inhibitor of novel coronavirus main protease and preparation method and use thereof
CN202011568282.7 2020-12-25

Publications (1)

Publication Number Publication Date
WO2022021841A1 true WO2022021841A1 (en) 2022-02-03

Family

ID=80037080

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/CN2021/076400 WO2022021841A1 (en) 2020-07-31 2021-02-09 Novel coronavirus main protease inhibitor, and preparation method therefor and use thereof

Country Status (2)

Country Link
CN (1) CN115960088B (en)
WO (1) WO2022021841A1 (en)

Cited By (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115043900A (en) * 2022-03-31 2022-09-13 深圳博瑞医药科技有限公司 A peptidomimetic compound and its use in preparing 2019-nCoV major protease inhibitor
WO2022218442A1 (en) * 2021-04-16 2022-10-20 南京明德新药研发有限公司 Ring-modified proline short peptide compound and use thereof
CN115490681A (en) * 2022-07-08 2022-12-20 歌礼生物科技(杭州)有限公司 Triazine derivatives
WO2022266363A1 (en) * 2021-06-16 2022-12-22 The Scripps Research Institute Protease inhibitors for the treatment of coronavirus infections
WO2023165334A1 (en) * 2022-03-01 2023-09-07 成都威斯克生物医药有限公司 Keto amide derivatives and pharmaceutical use thereof
WO2023168844A1 (en) * 2022-03-07 2023-09-14 广州谷森制药有限公司 Deuterated lactam compound, preparation method therefor, composition and use thereof
WO2023185763A1 (en) * 2022-04-01 2023-10-05 中国科学院上海药物研究所 Peptidomimetic compound, and preparation method, pharmaceutical composition and use therefor
GB2619610A (en) * 2020-07-20 2023-12-13 Enanta Pharm Inc Functionalized Peptides as Antiviral Agents
WO2024081318A1 (en) * 2022-10-13 2024-04-18 Aligos Therapeutics, Inc. Anti-viral compounds
US11976084B2 (en) 2020-11-23 2024-05-07 Enanta Pharmaceuticals, Inc. Spiropyrrolidine derived antiviral agents
US12145941B2 (en) 2021-12-08 2024-11-19 Enanta Pharmaceuticals, Inc. Heterocyclic antiviral agents
US12145942B2 (en) 2022-04-05 2024-11-19 Enanta Pharmaceuticals, Inc. Spiropyrrolidine derived antiviral agents

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP4165037A4 (en) * 2020-06-10 2024-07-03 Aligos Therapeutics, Inc. Anti-viral compounds for treating coronavirus, picornavirus, and norovirus infections
CN115894504A (en) * 2022-10-21 2023-04-04 深圳信立泰药业股份有限公司 Coronavirus 3CL protease inhibitor and application thereof
CN117756703B (en) * 2023-12-22 2024-12-10 广州国家实验室 Naphthalimide-based coronavirus papain-like protease inhibitors
CN117695281B (en) * 2023-12-26 2024-06-21 广州医科大学 Application of tetrahydroquinolinone-amide-thiazole compound

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1451014A (en) * 2000-08-31 2003-10-22 伊莱利利公司 Peptidomimetic protease inhibitors

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105837487A (en) * 2016-03-17 2016-08-10 天津国际生物医药联合研究院 Small-molecule inhibitor against MERS-CoV main protease, and preparation method and application thereof

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1451014A (en) * 2000-08-31 2003-10-22 伊莱利利公司 Peptidomimetic protease inhibitors

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
BECK BO RAM, SHIN BONGGUN, CHOI YOONJUNG, PARK SUNGSOO, KANG KEUNSOO: "Predicting commercially available antiviral drugs that may act on the novel coronavirus (SARS-CoV-2) through a drug-target interaction deep learning model", COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, vol. 18, 30 March 2020 (2020-03-30), Sweden , pages 784 - 790, XP055868923, ISSN: 2001-0370, DOI: 10.1016/j.csbj.2020.03.025 *
GUDASHEVA, T. VORONINA, T. OSTROVSKAYA, R. ROZANTSEV, G. VASILEVICH, N. TROFIMOV, S. KRAVCHENKO, E. SKOLDINOV, A. SEREDENIN, S.: "Synthesis and antiamnesic activity of a series of N-acylprolyl-containing dipeptides", EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, vol. 31, no. 2, 1 January 1996 (1996-01-01), AMSTERDAM, NL , pages 151 - 157, XP004040102, ISSN: 0223-5234, DOI: 10.1016/0223-5234(96)80448-X *
HUA SHUANG; YANG YONG; ZOU DANQI; LI JUFEI; YAN KAIXUAN; XU YING; JIANG XUE; RONG XIANGLU; YE DEWEI: "COVID-19 and metabolic comorbidities: An update on emerging evidences for optimal therapies", BIOMEDICINE & PHARMACOTHERAPY, vol. 140, 6 May 2021 (2021-05-06), FR , XP086635398, ISSN: 0753-3322, DOI: 10.1016/j.biopha.2021.111685 *

Cited By (17)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB2619610A (en) * 2020-07-20 2023-12-13 Enanta Pharm Inc Functionalized Peptides as Antiviral Agents
GB2619610B (en) * 2020-07-20 2025-04-09 Enanta Pharm Inc Functionalized Peptides as Antiviral Agents
US11976084B2 (en) 2020-11-23 2024-05-07 Enanta Pharmaceuticals, Inc. Spiropyrrolidine derived antiviral agents
CN117003813A (en) * 2021-04-16 2023-11-07 福建广生中霖生物科技有限公司 Ring-modified proline short peptide compound and application thereof
US12116367B2 (en) 2021-04-16 2024-10-15 Fujian Akeylink Biotechnology Co., Ltd. Ring-modified proline short peptide compound and use thereof
WO2022218442A1 (en) * 2021-04-16 2022-10-20 南京明德新药研发有限公司 Ring-modified proline short peptide compound and use thereof
CN117003813B (en) * 2021-04-16 2024-03-08 福建广生中霖生物科技有限公司 Ring-modified proline short peptide compound and application thereof
WO2022266363A1 (en) * 2021-06-16 2022-12-22 The Scripps Research Institute Protease inhibitors for the treatment of coronavirus infections
US12145941B2 (en) 2021-12-08 2024-11-19 Enanta Pharmaceuticals, Inc. Heterocyclic antiviral agents
WO2023165334A1 (en) * 2022-03-01 2023-09-07 成都威斯克生物医药有限公司 Keto amide derivatives and pharmaceutical use thereof
WO2023168844A1 (en) * 2022-03-07 2023-09-14 广州谷森制药有限公司 Deuterated lactam compound, preparation method therefor, composition and use thereof
CN115043900A (en) * 2022-03-31 2022-09-13 深圳博瑞医药科技有限公司 A peptidomimetic compound and its use in preparing 2019-nCoV major protease inhibitor
WO2023185763A1 (en) * 2022-04-01 2023-10-05 中国科学院上海药物研究所 Peptidomimetic compound, and preparation method, pharmaceutical composition and use therefor
US12145942B2 (en) 2022-04-05 2024-11-19 Enanta Pharmaceuticals, Inc. Spiropyrrolidine derived antiviral agents
CN115490681A (en) * 2022-07-08 2022-12-20 歌礼生物科技(杭州)有限公司 Triazine derivatives
CN115490681B (en) * 2022-07-08 2023-04-18 歌礼生物科技(杭州)有限公司 Triazine derivatives
WO2024081318A1 (en) * 2022-10-13 2024-04-18 Aligos Therapeutics, Inc. Anti-viral compounds

Also Published As

Publication number Publication date
CN115960088A (en) 2023-04-14
CN115960088B (en) 2024-07-26

Similar Documents

Publication Publication Date Title
WO2022021841A1 (en) Novel coronavirus main protease inhibitor, and preparation method therefor and use thereof
CN114057702B (en) A kind of inhibitor of novel coronavirus main protease and preparation method and use thereof
TWI790704B (en) Nitrile-containing antiviral compounds
WO2022013684A1 (en) Antiviral heteroaryl ketone derivatives
TW202304888A (en) Ether-linked antiviral compounds
EP4488264A1 (en) Keto amide derivatives and pharmaceutical use thereof
RU2786722C1 (en) Nitrile-containing antiviral compounds
RU2820150C2 (en) Nitrile-containing antiviral compounds
CN115108970B (en) Diamide derivative and pharmaceutical application thereof
NZ791608A (en) Nitrile-containing antiviral compounds
HK40064692A (en) Nitrile-containing antiviral compounds
HK40064692B (en) Nitrile-containing antiviral compounds
HK40073397A (en) Nitrile-containing antiviral compounds

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 21850832

Country of ref document: EP

Kind code of ref document: A1

NENP Non-entry into the national phase

Ref country code: DE

122 Ep: pct application non-entry in european phase

Ref document number: 21850832

Country of ref document: EP

Kind code of ref document: A1