WO2010106441A2 - Peptidomimetics for modulating interleukin-1 receptor - Google Patents
Peptidomimetics for modulating interleukin-1 receptor Download PDFInfo
- Publication number
- WO2010106441A2 WO2010106441A2 PCT/IB2010/000914 IB2010000914W WO2010106441A2 WO 2010106441 A2 WO2010106441 A2 WO 2010106441A2 IB 2010000914 W IB2010000914 W IB 2010000914W WO 2010106441 A2 WO2010106441 A2 WO 2010106441A2
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- peptide
- peptidomimetic
- amino acids
- seq
- disease
- Prior art date
Links
- 239000000816 peptidomimetic Substances 0.000 title claims abstract description 122
- 102000019223 Interleukin-1 receptor Human genes 0.000 title claims description 3
- 108050006617 Interleukin-1 receptor Proteins 0.000 title claims description 3
- 150000003951 lactams Chemical group 0.000 claims abstract description 122
- 238000000034 method Methods 0.000 claims abstract description 79
- 102000005962 receptors Human genes 0.000 claims abstract description 77
- 108020003175 receptors Proteins 0.000 claims abstract description 77
- 230000000694 effects Effects 0.000 claims abstract description 75
- 238000011282 treatment Methods 0.000 claims abstract description 29
- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 13
- 230000001976 improved effect Effects 0.000 claims abstract description 7
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 350
- 150000001413 amino acids Chemical class 0.000 claims description 119
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims description 76
- -1 indolizidin-2-one amino acid Chemical class 0.000 claims description 54
- 108090000623 proteins and genes Proteins 0.000 claims description 51
- 102000004169 proteins and genes Human genes 0.000 claims description 49
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 48
- 201000010099 disease Diseases 0.000 claims description 47
- 229910052757 nitrogen Inorganic materials 0.000 claims description 37
- 238000012360 testing method Methods 0.000 claims description 33
- 210000004027 cell Anatomy 0.000 claims description 30
- 229920006395 saturated elastomer Polymers 0.000 claims description 29
- 208000035475 disorder Diseases 0.000 claims description 28
- 125000005842 heteroatom Chemical group 0.000 claims description 28
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 claims description 26
- 125000001931 aliphatic group Chemical group 0.000 claims description 26
- 125000000623 heterocyclic group Chemical group 0.000 claims description 26
- 229910052717 sulfur Chemical group 0.000 claims description 26
- 239000011593 sulfur Chemical group 0.000 claims description 26
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical group [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 24
- 229910052760 oxygen Inorganic materials 0.000 claims description 24
- 239000001301 oxygen Chemical group 0.000 claims description 24
- 150000008574 D-amino acids Chemical class 0.000 claims description 19
- 206010003246 arthritis Diseases 0.000 claims description 18
- 208000027866 inflammatory disease Diseases 0.000 claims description 18
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 claims description 17
- 108010089948 101.10 peptide Proteins 0.000 claims description 16
- 230000004048 modification Effects 0.000 claims description 15
- 238000012986 modification Methods 0.000 claims description 15
- 238000006467 substitution reaction Methods 0.000 claims description 15
- 229910052736 halogen Inorganic materials 0.000 claims description 13
- 150000002367 halogens Chemical class 0.000 claims description 13
- 208000022559 Inflammatory bowel disease Diseases 0.000 claims description 11
- 238000003780 insertion Methods 0.000 claims description 11
- 230000037431 insertion Effects 0.000 claims description 11
- 229940126662 negative allosteric modulator Drugs 0.000 claims description 11
- 229940126027 positive allosteric modulator Drugs 0.000 claims description 11
- 230000002401 inhibitory effect Effects 0.000 claims description 10
- 108091005601 modified peptides Proteins 0.000 claims description 10
- 125000004429 atom Chemical group 0.000 claims description 9
- 229910052739 hydrogen Inorganic materials 0.000 claims description 9
- 239000001257 hydrogen Substances 0.000 claims description 9
- 230000002757 inflammatory effect Effects 0.000 claims description 9
- 208000032672 Histiocytosis haematophagic Diseases 0.000 claims description 8
- 108091005804 Peptidases Proteins 0.000 claims description 8
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 8
- 201000008482 osteoarthritis Diseases 0.000 claims description 8
- 206010039073 rheumatoid arthritis Diseases 0.000 claims description 8
- 238000007363 ring formation reaction Methods 0.000 claims description 8
- 206010001052 Acute respiratory distress syndrome Diseases 0.000 claims description 7
- 208000013616 Respiratory Distress Syndrome Diseases 0.000 claims description 7
- 206010040070 Septic Shock Diseases 0.000 claims description 7
- 208000006011 Stroke Diseases 0.000 claims description 7
- 239000003937 drug carrier Substances 0.000 claims description 7
- 230000004968 inflammatory condition Effects 0.000 claims description 7
- 230000036303 septic shock Effects 0.000 claims description 7
- 208000023275 Autoimmune disease Diseases 0.000 claims description 6
- 208000012659 Joint disease Diseases 0.000 claims description 6
- 239000004365 Protease Substances 0.000 claims description 6
- 201000004681 Psoriasis Diseases 0.000 claims description 6
- 230000001154 acute effect Effects 0.000 claims description 6
- 208000006673 asthma Diseases 0.000 claims description 6
- 125000002837 carbocyclic group Chemical group 0.000 claims description 6
- 208000014674 injury Diseases 0.000 claims description 6
- 208000002574 reactive arthritis Diseases 0.000 claims description 6
- 210000002966 serum Anatomy 0.000 claims description 6
- 206010002556 Ankylosing Spondylitis Diseases 0.000 claims description 5
- 208000036824 Psoriatic arthropathy Diseases 0.000 claims description 5
- 206010006451 bronchitis Diseases 0.000 claims description 5
- 210000004899 c-terminal region Anatomy 0.000 claims description 5
- 230000013595 glycosylation Effects 0.000 claims description 5
- 238000006206 glycosylation reaction Methods 0.000 claims description 5
- 208000015446 immunoglobulin a vasculitis Diseases 0.000 claims description 5
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 5
- 201000000306 sarcoidosis Diseases 0.000 claims description 5
- 208000024827 Alzheimer disease Diseases 0.000 claims description 4
- 206010006448 Bronchiolitis Diseases 0.000 claims description 4
- 208000016192 Demyelinating disease Diseases 0.000 claims description 4
- 201000005569 Gout Diseases 0.000 claims description 4
- 208000036066 Hemophagocytic Lymphohistiocytosis Diseases 0.000 claims description 4
- 208000004575 Infectious Arthritis Diseases 0.000 claims description 4
- 208000004987 Macrophage activation syndrome Diseases 0.000 claims description 4
- 201000009906 Meningitis Diseases 0.000 claims description 4
- 206010028980 Neoplasm Diseases 0.000 claims description 4
- 208000033464 Reiter syndrome Diseases 0.000 claims description 4
- 206010039710 Scleroderma Diseases 0.000 claims description 4
- 206010051379 Systemic Inflammatory Response Syndrome Diseases 0.000 claims description 4
- 206010047115 Vasculitis Diseases 0.000 claims description 4
- 208000027418 Wounds and injury Diseases 0.000 claims description 4
- 208000002552 acute disseminated encephalomyelitis Diseases 0.000 claims description 4
- 230000006378 damage Effects 0.000 claims description 4
- 206010014599 encephalitis Diseases 0.000 claims description 4
- 230000002538 fungal effect Effects 0.000 claims description 4
- 208000014752 hemophagocytic syndrome Diseases 0.000 claims description 4
- 206010025135 lupus erythematosus Diseases 0.000 claims description 4
- 201000006417 multiple sclerosis Diseases 0.000 claims description 4
- 125000004433 nitrogen atom Chemical group N* 0.000 claims description 4
- 208000011580 syndromic disease Diseases 0.000 claims description 4
- 201000000596 systemic lupus erythematosus Diseases 0.000 claims description 4
- 201000001320 Atherosclerosis Diseases 0.000 claims description 3
- 206010006458 Bronchitis chronic Diseases 0.000 claims description 3
- 206010006811 Bursitis Diseases 0.000 claims description 3
- OYPRJOBELJOOCE-UHFFFAOYSA-N Calcium Chemical compound [Ca] OYPRJOBELJOOCE-UHFFFAOYSA-N 0.000 claims description 3
- 208000006545 Chronic Obstructive Pulmonary Disease Diseases 0.000 claims description 3
- 206010009900 Colitis ulcerative Diseases 0.000 claims description 3
- 208000011231 Crohn disease Diseases 0.000 claims description 3
- 201000003883 Cystic fibrosis Diseases 0.000 claims description 3
- 201000004624 Dermatitis Diseases 0.000 claims description 3
- 206010012438 Dermatitis atopic Diseases 0.000 claims description 3
- 206010016654 Fibrosis Diseases 0.000 claims description 3
- 208000009329 Graft vs Host Disease Diseases 0.000 claims description 3
- 201000004331 Henoch-Schoenlein purpura Diseases 0.000 claims description 3
- 206010019617 Henoch-Schonlein purpura Diseases 0.000 claims description 3
- 208000031814 IgA Vasculitis Diseases 0.000 claims description 3
- 206010059176 Juvenile idiopathic arthritis Diseases 0.000 claims description 3
- 208000019693 Lung disease Diseases 0.000 claims description 3
- 208000005777 Lupus Nephritis Diseases 0.000 claims description 3
- 206010033645 Pancreatitis Diseases 0.000 claims description 3
- 206010065159 Polychondritis Diseases 0.000 claims description 3
- 201000001263 Psoriatic Arthritis Diseases 0.000 claims description 3
- 206010039085 Rhinitis allergic Diseases 0.000 claims description 3
- 208000021386 Sjogren Syndrome Diseases 0.000 claims description 3
- 201000006704 Ulcerative Colitis Diseases 0.000 claims description 3
- 230000021736 acetylation Effects 0.000 claims description 3
- 238000006640 acetylation reaction Methods 0.000 claims description 3
- 201000000028 adult respiratory distress syndrome Diseases 0.000 claims description 3
- 201000010105 allergic rhinitis Diseases 0.000 claims description 3
- 230000009435 amidation Effects 0.000 claims description 3
- 238000007112 amidation reaction Methods 0.000 claims description 3
- 201000008937 atopic dermatitis Diseases 0.000 claims description 3
- 238000007413 biotinylation Methods 0.000 claims description 3
- 230000006287 biotinylation Effects 0.000 claims description 3
- 239000011575 calcium Substances 0.000 claims description 3
- 229910052791 calcium Inorganic materials 0.000 claims description 3
- 210000000748 cardiovascular system Anatomy 0.000 claims description 3
- 208000007451 chronic bronchitis Diseases 0.000 claims description 3
- 230000001684 chronic effect Effects 0.000 claims description 3
- 230000007882 cirrhosis Effects 0.000 claims description 3
- 208000019425 cirrhosis of liver Diseases 0.000 claims description 3
- 206010012601 diabetes mellitus Diseases 0.000 claims description 3
- 208000024908 graft versus host disease Diseases 0.000 claims description 3
- 208000030603 inherited susceptibility to asthma Diseases 0.000 claims description 3
- 201000002215 juvenile rheumatoid arthritis Diseases 0.000 claims description 3
- 206010028417 myasthenia gravis Diseases 0.000 claims description 3
- 201000006292 polyarteritis nodosa Diseases 0.000 claims description 3
- 208000009169 relapsing polychondritis Diseases 0.000 claims description 3
- 210000003491 skin Anatomy 0.000 claims description 3
- 206010000599 Acromegaly Diseases 0.000 claims description 2
- 208000008190 Agammaglobulinemia Diseases 0.000 claims description 2
- 206010003267 Arthritis reactive Diseases 0.000 claims description 2
- 206010003274 Arthritis viral Diseases 0.000 claims description 2
- 208000036487 Arthropathies Diseases 0.000 claims description 2
- 206010003645 Atopy Diseases 0.000 claims description 2
- 208000035143 Bacterial infection Diseases 0.000 claims description 2
- 206010006895 Cachexia Diseases 0.000 claims description 2
- 208000024172 Cardiovascular disease Diseases 0.000 claims description 2
- 206010008690 Chondrocalcinosis pyrophosphate Diseases 0.000 claims description 2
- 208000030939 Chronic inflammatory demyelinating polyneuropathy Diseases 0.000 claims description 2
- 206010014561 Emphysema Diseases 0.000 claims description 2
- 206010064212 Eosinophilic oesophagitis Diseases 0.000 claims description 2
- 201000011275 Epicondylitis Diseases 0.000 claims description 2
- 206010016207 Familial Mediterranean fever Diseases 0.000 claims description 2
- 206010017533 Fungal infection Diseases 0.000 claims description 2
- 206010018364 Glomerulonephritis Diseases 0.000 claims description 2
- 208000035895 Guillain-Barré syndrome Diseases 0.000 claims description 2
- 208000030836 Hashimoto thyroiditis Diseases 0.000 claims description 2
- 208000018565 Hemochromatosis Diseases 0.000 claims description 2
- 201000002980 Hyperparathyroidism Diseases 0.000 claims description 2
- 206010020877 Hypertrophic osteoarthropathy Diseases 0.000 claims description 2
- 206010020983 Hypogammaglobulinaemia Diseases 0.000 claims description 2
- 208000003456 Juvenile Arthritis Diseases 0.000 claims description 2
- 208000011200 Kawasaki disease Diseases 0.000 claims description 2
- 208000034624 Leukocytoclastic Cutaneous Vasculitis Diseases 0.000 claims description 2
- 208000032514 Leukocytoclastic vasculitis Diseases 0.000 claims description 2
- 208000016604 Lyme disease Diseases 0.000 claims description 2
- 206010049567 Miller Fisher syndrome Diseases 0.000 claims description 2
- 208000031888 Mycoses Diseases 0.000 claims description 2
- 208000024842 Polyneuropathy associated with IgM monoclonal gammapathy with anti-MAG Diseases 0.000 claims description 2
- 208000010362 Protozoan Infections Diseases 0.000 claims description 2
- 206010040047 Sepsis Diseases 0.000 claims description 2
- 201000002661 Spondylitis Diseases 0.000 claims description 2
- 208000002240 Tennis Elbow Diseases 0.000 claims description 2
- 208000036142 Viral infection Diseases 0.000 claims description 2
- 208000021240 acute bronchiolitis Diseases 0.000 claims description 2
- 208000011341 adult acute respiratory distress syndrome Diseases 0.000 claims description 2
- 206010003230 arteritis Diseases 0.000 claims description 2
- 230000001580 bacterial effect Effects 0.000 claims description 2
- 208000022362 bacterial infectious disease Diseases 0.000 claims description 2
- 208000003295 carpal tunnel syndrome Diseases 0.000 claims description 2
- 208000002849 chondrocalcinosis Diseases 0.000 claims description 2
- 208000019069 chronic childhood arthritis Diseases 0.000 claims description 2
- 201000005795 chronic inflammatory demyelinating polyneuritis Diseases 0.000 claims description 2
- 239000013078 crystal Substances 0.000 claims description 2
- 206010061811 demyelinating polyneuropathy Diseases 0.000 claims description 2
- 230000008021 deposition Effects 0.000 claims description 2
- 208000009190 disseminated intravascular coagulation Diseases 0.000 claims description 2
- 201000000708 eosinophilic esophagitis Diseases 0.000 claims description 2
- 208000002085 hemarthrosis Diseases 0.000 claims description 2
- 201000006362 hypersensitivity vasculitis Diseases 0.000 claims description 2
- 230000002458 infectious effect Effects 0.000 claims description 2
- 239000002085 irritant Substances 0.000 claims description 2
- 231100000021 irritant Toxicity 0.000 claims description 2
- 201000004990 juvenile ankylosing spondylitis Diseases 0.000 claims description 2
- 230000000366 juvenile effect Effects 0.000 claims description 2
- 210000003734 kidney Anatomy 0.000 claims description 2
- 208000032839 leukemia Diseases 0.000 claims description 2
- 201000002364 leukopenia Diseases 0.000 claims description 2
- 210000004185 liver Anatomy 0.000 claims description 2
- 208000001725 mucocutaneous lymph node syndrome Diseases 0.000 claims description 2
- 201000011201 multicentric reticulohistiocytosis Diseases 0.000 claims description 2
- 210000000653 nervous system Anatomy 0.000 claims description 2
- 208000008795 neuromyelitis optica Diseases 0.000 claims description 2
- 230000002981 neuropathic effect Effects 0.000 claims description 2
- 210000000496 pancreas Anatomy 0.000 claims description 2
- 244000052769 pathogen Species 0.000 claims description 2
- 230000000750 progressive effect Effects 0.000 claims description 2
- 208000002815 pulmonary hypertension Diseases 0.000 claims description 2
- 230000003252 repetitive effect Effects 0.000 claims description 2
- 208000023504 respiratory system disease Diseases 0.000 claims description 2
- 201000001223 septic arthritis Diseases 0.000 claims description 2
- 230000035939 shock Effects 0.000 claims description 2
- 208000007056 sickle cell anemia Diseases 0.000 claims description 2
- 230000009885 systemic effect Effects 0.000 claims description 2
- 208000009174 transverse myelitis Diseases 0.000 claims description 2
- 230000003156 vasculitic effect Effects 0.000 claims description 2
- 230000003612 virological effect Effects 0.000 claims description 2
- 230000029663 wound healing Effects 0.000 claims description 2
- 102100037486 Reverse transcriptase/ribonuclease H Human genes 0.000 claims 1
- 150000001875 compounds Chemical class 0.000 abstract description 64
- 239000000203 mixture Substances 0.000 abstract description 33
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 270
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 165
- 229910001868 water Inorganic materials 0.000 description 131
- 102000004196 processed proteins & peptides Human genes 0.000 description 125
- 238000004007 reversed phase HPLC Methods 0.000 description 118
- 235000001014 amino acid Nutrition 0.000 description 110
- 229940024606 amino acid Drugs 0.000 description 110
- 102000000589 Interleukin-1 Human genes 0.000 description 95
- 108010002352 Interleukin-1 Proteins 0.000 description 95
- 239000011347 resin Substances 0.000 description 56
- 229920005989 resin Polymers 0.000 description 56
- 238000000746 purification Methods 0.000 description 50
- 230000004071 biological effect Effects 0.000 description 40
- 235000018102 proteins Nutrition 0.000 description 40
- 239000012264 purified product Substances 0.000 description 38
- 238000010719 annulation reaction Methods 0.000 description 35
- 239000000243 solution Substances 0.000 description 35
- 230000015572 biosynthetic process Effects 0.000 description 32
- HEDRZPFGACZZDS-MICDWDOJSA-N Trichloro(2H)methane Chemical compound [2H]C(Cl)(Cl)Cl HEDRZPFGACZZDS-MICDWDOJSA-N 0.000 description 31
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 27
- 150000003839 salts Chemical class 0.000 description 27
- 239000007787 solid Substances 0.000 description 26
- 238000003786 synthesis reaction Methods 0.000 description 26
- 239000000047 product Substances 0.000 description 24
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 23
- 125000003118 aryl group Chemical group 0.000 description 23
- 238000005804 alkylation reaction Methods 0.000 description 22
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 20
- BDAGIHXWWSANSR-UHFFFAOYSA-N Formic acid Chemical class OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 20
- 239000005557 antagonist Substances 0.000 description 19
- 238000004128 high performance liquid chromatography Methods 0.000 description 19
- 125000003088 (fluoren-9-ylmethoxy)carbonyl group Chemical group 0.000 description 18
- 241001465382 Physalis alkekengi Species 0.000 description 18
- 230000029936 alkylation Effects 0.000 description 18
- 238000003556 assay Methods 0.000 description 18
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 17
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 17
- 125000000217 alkyl group Chemical group 0.000 description 17
- 125000003275 alpha amino acid group Chemical group 0.000 description 17
- 125000004432 carbon atom Chemical group C* 0.000 description 17
- 239000006260 foam Substances 0.000 description 17
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 17
- 238000006243 chemical reaction Methods 0.000 description 16
- 125000001424 substituent group Chemical group 0.000 description 16
- 239000000556 agonist Substances 0.000 description 15
- 230000027455 binding Effects 0.000 description 15
- 238000009739 binding Methods 0.000 description 15
- 239000003795 chemical substances by application Substances 0.000 description 15
- 125000001072 heteroaryl group Chemical group 0.000 description 15
- 125000006239 protecting group Chemical group 0.000 description 15
- 241001465754 Metazoa Species 0.000 description 14
- 238000010511 deprotection reaction Methods 0.000 description 14
- 238000007792 addition Methods 0.000 description 13
- 239000000126 substance Substances 0.000 description 13
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 12
- 150000008575 L-amino acids Chemical class 0.000 description 12
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 12
- 238000003776 cleavage reaction Methods 0.000 description 12
- 239000003814 drug Substances 0.000 description 12
- 239000003446 ligand Substances 0.000 description 12
- 230000007017 scission Effects 0.000 description 12
- 241000282414 Homo sapiens Species 0.000 description 11
- 150000001408 amides Chemical group 0.000 description 10
- 230000003042 antagnostic effect Effects 0.000 description 10
- 229910052786 argon Inorganic materials 0.000 description 10
- 230000008878 coupling Effects 0.000 description 10
- 238000010168 coupling process Methods 0.000 description 10
- 238000005859 coupling reaction Methods 0.000 description 10
- 125000004122 cyclic group Chemical group 0.000 description 10
- 238000010647 peptide synthesis reaction Methods 0.000 description 10
- 230000035755 proliferation Effects 0.000 description 10
- 208000024891 symptom Diseases 0.000 description 10
- 230000001225 therapeutic effect Effects 0.000 description 10
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 9
- 125000003342 alkenyl group Chemical group 0.000 description 9
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 description 9
- 230000007423 decrease Effects 0.000 description 9
- 238000001914 filtration Methods 0.000 description 9
- 102000037865 fusion proteins Human genes 0.000 description 9
- 108020001507 fusion proteins Proteins 0.000 description 9
- 239000000523 sample Substances 0.000 description 9
- 238000005406 washing Methods 0.000 description 9
- 238000005160 1H NMR spectroscopy Methods 0.000 description 8
- 239000004698 Polyethylene Substances 0.000 description 8
- 125000000304 alkynyl group Chemical group 0.000 description 8
- 238000010171 animal model Methods 0.000 description 8
- XEYBRNLFEZDVAW-ARSRFYASSA-N dinoprostone Chemical compound CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1C\C=C/CCCC(O)=O XEYBRNLFEZDVAW-ARSRFYASSA-N 0.000 description 8
- 239000003112 inhibitor Substances 0.000 description 8
- 229920003023 plastic Polymers 0.000 description 8
- 239000004033 plastic Substances 0.000 description 8
- 229920000573 polyethylene Polymers 0.000 description 8
- 229920001184 polypeptide Polymers 0.000 description 8
- 230000002441 reversible effect Effects 0.000 description 8
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 8
- 206010061218 Inflammation Diseases 0.000 description 7
- 102000035195 Peptidases Human genes 0.000 description 7
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 7
- 125000002947 alkylene group Chemical group 0.000 description 7
- 150000001412 amines Chemical class 0.000 description 7
- 125000000539 amino acid group Chemical group 0.000 description 7
- 230000004663 cell proliferation Effects 0.000 description 7
- 229940079593 drug Drugs 0.000 description 7
- 239000011521 glass Substances 0.000 description 7
- 238000001727 in vivo Methods 0.000 description 7
- 230000004054 inflammatory process Effects 0.000 description 7
- 230000005764 inhibitory process Effects 0.000 description 7
- 238000004519 manufacturing process Methods 0.000 description 7
- 239000000377 silicon dioxide Substances 0.000 description 7
- 238000010561 standard procedure Methods 0.000 description 7
- 238000001644 13C nuclear magnetic resonance spectroscopy Methods 0.000 description 6
- 102000004127 Cytokines Human genes 0.000 description 6
- 108090000695 Cytokines Proteins 0.000 description 6
- 239000004793 Polystyrene Substances 0.000 description 6
- 241001303601 Rosacea Species 0.000 description 6
- 229920002472 Starch Polymers 0.000 description 6
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 description 6
- 229910052799 carbon Inorganic materials 0.000 description 6
- 238000000338 in vitro Methods 0.000 description 6
- 238000011068 loading method Methods 0.000 description 6
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical class CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 6
- 239000012071 phase Substances 0.000 description 6
- 229920002223 polystyrene Polymers 0.000 description 6
- 230000004044 response Effects 0.000 description 6
- 201000004700 rosacea Diseases 0.000 description 6
- 238000010532 solid phase synthesis reaction Methods 0.000 description 6
- 239000008107 starch Substances 0.000 description 6
- 235000019698 starch Nutrition 0.000 description 6
- 229940032147 starch Drugs 0.000 description 6
- VBICKXHEKHSIBG-UHFFFAOYSA-N 1-monostearoylglycerol Chemical compound CCCCCCCCCCCCCCCCCC(=O)OCC(O)CO VBICKXHEKHSIBG-UHFFFAOYSA-N 0.000 description 5
- 108010016626 Dipeptides Proteins 0.000 description 5
- 229940119178 Interleukin 1 receptor antagonist Drugs 0.000 description 5
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 5
- 230000009471 action Effects 0.000 description 5
- 235000008206 alpha-amino acids Nutrition 0.000 description 5
- UCMIRNVEIXFBKS-UHFFFAOYSA-N beta-alanine Chemical compound NCCC(O)=O UCMIRNVEIXFBKS-UHFFFAOYSA-N 0.000 description 5
- 125000002993 cycloalkylene group Chemical group 0.000 description 5
- 238000012217 deletion Methods 0.000 description 5
- 230000037430 deletion Effects 0.000 description 5
- 230000006870 function Effects 0.000 description 5
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 description 5
- PAFKBFNWTZPNEI-ZVAWYAOSSA-N methyl (2s)-2-(9h-fluoren-9-ylmethoxycarbonylamino)-2-(oxiran-2-yl)acetate Chemical compound C1([C@H](NC(=O)OCC2C3=CC=CC=C3C3=CC=CC=C32)C(=O)OC)CO1 PAFKBFNWTZPNEI-ZVAWYAOSSA-N 0.000 description 5
- 230000000144 pharmacologic effect Effects 0.000 description 5
- 238000002360 preparation method Methods 0.000 description 5
- 230000008569 process Effects 0.000 description 5
- 125000006413 ring segment Chemical group 0.000 description 5
- 238000006884 silylation reaction Methods 0.000 description 5
- 239000011734 sodium Substances 0.000 description 5
- 239000000758 substrate Substances 0.000 description 5
- 230000008961 swelling Effects 0.000 description 5
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 5
- 229940124597 therapeutic agent Drugs 0.000 description 5
- MTCFGRXMJLQNBG-REOHCLBHSA-N (2S)-2-Amino-3-hydroxypropansäure Chemical compound OC[C@H](N)C(O)=O MTCFGRXMJLQNBG-REOHCLBHSA-N 0.000 description 4
- HBAQYPYDRFILMT-UHFFFAOYSA-N 8-[3-(1-cyclopropylpyrazol-4-yl)-1H-pyrazolo[4,3-d]pyrimidin-5-yl]-3-methyl-3,8-diazabicyclo[3.2.1]octan-2-one Chemical class C1(CC1)N1N=CC(=C1)C1=NNC2=C1N=C(N=C2)N1C2C(N(CC1CC2)C)=O HBAQYPYDRFILMT-UHFFFAOYSA-N 0.000 description 4
- 125000001433 C-terminal amino-acid group Chemical group 0.000 description 4
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 4
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 4
- XUJNEKJLAYXESH-REOHCLBHSA-N L-Cysteine Chemical compound SC[C@H](N)C(O)=O XUJNEKJLAYXESH-REOHCLBHSA-N 0.000 description 4
- KDXKERNSBIXSRK-YFKPBYRVSA-N L-lysine Chemical compound NCCCC[C@H](N)C(O)=O KDXKERNSBIXSRK-YFKPBYRVSA-N 0.000 description 4
- AYFVYJQAPQTCCC-GBXIJSLDSA-N L-threonine Chemical compound C[C@@H](O)[C@H](N)C(O)=O AYFVYJQAPQTCCC-GBXIJSLDSA-N 0.000 description 4
- 241000124008 Mammalia Species 0.000 description 4
- 229920000168 Microcrystalline cellulose Polymers 0.000 description 4
- 108091000080 Phosphotransferase Proteins 0.000 description 4
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical compound O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 description 4
- RHQDFWAXVIIEBN-UHFFFAOYSA-N Trifluoroethanol Chemical compound OCC(F)(F)F RHQDFWAXVIIEBN-UHFFFAOYSA-N 0.000 description 4
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 4
- 230000004913 activation Effects 0.000 description 4
- 230000001270 agonistic effect Effects 0.000 description 4
- 230000000172 allergic effect Effects 0.000 description 4
- 150000001371 alpha-amino acids Chemical class 0.000 description 4
- 125000003277 amino group Chemical group 0.000 description 4
- 238000013459 approach Methods 0.000 description 4
- 208000010668 atopic eczema Diseases 0.000 description 4
- 125000001584 benzyloxycarbonyl group Chemical group C(=O)(OCC1=CC=CC=C1)* 0.000 description 4
- 125000002619 bicyclic group Chemical group 0.000 description 4
- 239000011230 binding agent Substances 0.000 description 4
- 150000001721 carbon Chemical group 0.000 description 4
- 239000000969 carrier Substances 0.000 description 4
- 238000001516 cell proliferation assay Methods 0.000 description 4
- 210000003169 central nervous system Anatomy 0.000 description 4
- 238000005119 centrifugation Methods 0.000 description 4
- 208000037976 chronic inflammation Diseases 0.000 description 4
- 125000000753 cycloalkyl group Chemical group 0.000 description 4
- 108010057085 cytokine receptors Proteins 0.000 description 4
- 102000003675 cytokine receptors Human genes 0.000 description 4
- 238000011161 development Methods 0.000 description 4
- 230000018109 developmental process Effects 0.000 description 4
- 239000012636 effector Substances 0.000 description 4
- 150000002148 esters Chemical class 0.000 description 4
- 238000002474 experimental method Methods 0.000 description 4
- 239000000706 filtrate Substances 0.000 description 4
- 239000012634 fragment Substances 0.000 description 4
- 238000002825 functional assay Methods 0.000 description 4
- RWSXRVCMGQZWBV-WDSKDSINSA-N glutathione Chemical compound OC(=O)[C@@H](N)CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O RWSXRVCMGQZWBV-WDSKDSINSA-N 0.000 description 4
- 125000005843 halogen group Chemical group 0.000 description 4
- 150000002431 hydrogen Chemical class 0.000 description 4
- 238000010348 incorporation Methods 0.000 description 4
- 230000001965 increasing effect Effects 0.000 description 4
- 230000000670 limiting effect Effects 0.000 description 4
- 239000000463 material Substances 0.000 description 4
- 150000004702 methyl esters Chemical class 0.000 description 4
- 239000008108 microcrystalline cellulose Substances 0.000 description 4
- 229940016286 microcrystalline cellulose Drugs 0.000 description 4
- 235000019813 microcrystalline cellulose Nutrition 0.000 description 4
- 125000002950 monocyclic group Chemical group 0.000 description 4
- CMWYAOXYQATXSI-UHFFFAOYSA-N n,n-dimethylformamide;piperidine Chemical compound CN(C)C=O.C1CCNCC1 CMWYAOXYQATXSI-UHFFFAOYSA-N 0.000 description 4
- 102000020233 phosphotransferase Human genes 0.000 description 4
- IXPNQXFRVYWDDI-UHFFFAOYSA-N 1-methyl-2,4-dioxo-1,3-diazinane-5-carboximidamide Chemical compound CN1CC(C(N)=N)C(=O)NC1=O IXPNQXFRVYWDDI-UHFFFAOYSA-N 0.000 description 3
- FUOOLUPWFVMBKG-UHFFFAOYSA-N 2-Aminoisobutyric acid Chemical compound CC(C)(N)C(O)=O FUOOLUPWFVMBKG-UHFFFAOYSA-N 0.000 description 3
- 229920002134 Carboxymethyl cellulose Polymers 0.000 description 3
- 102000029816 Collagenase Human genes 0.000 description 3
- 108060005980 Collagenase Proteins 0.000 description 3
- 108091035707 Consensus sequence Proteins 0.000 description 3
- ZGTMUACCHSMWAC-UHFFFAOYSA-L EDTA disodium salt (anhydrous) Chemical compound [Na+].[Na+].OC(=O)CN(CC([O-])=O)CCN(CC(O)=O)CC([O-])=O ZGTMUACCHSMWAC-UHFFFAOYSA-L 0.000 description 3
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 3
- 102000018389 Exopeptidases Human genes 0.000 description 3
- 108010091443 Exopeptidases Proteins 0.000 description 3
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 3
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 3
- 229920002153 Hydroxypropyl cellulose Polymers 0.000 description 3
- 108090001005 Interleukin-6 Proteins 0.000 description 3
- 102000004889 Interleukin-6 Human genes 0.000 description 3
- ROHFNLRQFUQHCH-UHFFFAOYSA-N Leucine Natural products CC(C)CC(N)C(O)=O ROHFNLRQFUQHCH-UHFFFAOYSA-N 0.000 description 3
- 241000699666 Mus <mouse, genus> Species 0.000 description 3
- WHNWPMSKXPGLAX-UHFFFAOYSA-N N-Vinyl-2-pyrrolidone Chemical compound C=CN1CCCC1=O WHNWPMSKXPGLAX-UHFFFAOYSA-N 0.000 description 3
- 208000002193 Pain Diseases 0.000 description 3
- DNIAPMSPPWPWGF-UHFFFAOYSA-N Propylene glycol Chemical compound CC(O)CO DNIAPMSPPWPWGF-UHFFFAOYSA-N 0.000 description 3
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 3
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 description 3
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 3
- 239000002253 acid Substances 0.000 description 3
- 239000013543 active substance Substances 0.000 description 3
- 125000002252 acyl group Chemical group 0.000 description 3
- 235000010443 alginic acid Nutrition 0.000 description 3
- 229920000615 alginic acid Polymers 0.000 description 3
- 239000000783 alginic acid Substances 0.000 description 3
- 229960001126 alginic acid Drugs 0.000 description 3
- 150000004781 alginic acids Chemical class 0.000 description 3
- 230000003281 allosteric effect Effects 0.000 description 3
- SNAAJJQQZSMGQD-UHFFFAOYSA-N aluminum magnesium Chemical compound [Mg].[Al] SNAAJJQQZSMGQD-UHFFFAOYSA-N 0.000 description 3
- 238000004458 analytical method Methods 0.000 description 3
- 239000007864 aqueous solution Substances 0.000 description 3
- 230000009286 beneficial effect Effects 0.000 description 3
- 230000008901 benefit Effects 0.000 description 3
- 230000000975 bioactive effect Effects 0.000 description 3
- 150000001720 carbohydrates Chemical class 0.000 description 3
- 235000014633 carbohydrates Nutrition 0.000 description 3
- 235000010948 carboxy methyl cellulose Nutrition 0.000 description 3
- 239000001768 carboxy methyl cellulose Substances 0.000 description 3
- 239000008112 carboxymethyl-cellulose Substances 0.000 description 3
- 229940105329 carboxymethylcellulose Drugs 0.000 description 3
- 238000007385 chemical modification Methods 0.000 description 3
- 238000004587 chromatography analysis Methods 0.000 description 3
- 208000037893 chronic inflammatory disorder Diseases 0.000 description 3
- 229960002424 collagenase Drugs 0.000 description 3
- 229940075614 colloidal silicon dioxide Drugs 0.000 description 3
- XUJNEKJLAYXESH-UHFFFAOYSA-N cysteine Natural products SCC(N)C(O)=O XUJNEKJLAYXESH-UHFFFAOYSA-N 0.000 description 3
- 235000018417 cysteine Nutrition 0.000 description 3
- BNIILDVGGAEEIG-UHFFFAOYSA-L disodium hydrogen phosphate Chemical compound [Na+].[Na+].OP([O-])([O-])=O BNIILDVGGAEEIG-UHFFFAOYSA-L 0.000 description 3
- 230000001747 exhibiting effect Effects 0.000 description 3
- 210000002950 fibroblast Anatomy 0.000 description 3
- 239000000945 filler Substances 0.000 description 3
- 230000005714 functional activity Effects 0.000 description 3
- 238000010438 heat treatment Methods 0.000 description 3
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 3
- 235000010977 hydroxypropyl cellulose Nutrition 0.000 description 3
- 239000001863 hydroxypropyl cellulose Substances 0.000 description 3
- 229940071676 hydroxypropylcellulose Drugs 0.000 description 3
- 230000006698 induction Effects 0.000 description 3
- 208000015181 infectious disease Diseases 0.000 description 3
- 230000003993 interaction Effects 0.000 description 3
- JVTAAEKCZFNVCJ-UHFFFAOYSA-N lactic acid Chemical compound CC(O)C(O)=O JVTAAEKCZFNVCJ-UHFFFAOYSA-N 0.000 description 3
- 229920002521 macromolecule Polymers 0.000 description 3
- 125000000325 methylidene group Chemical group [H]C([H])=* 0.000 description 3
- 230000003278 mimic effect Effects 0.000 description 3
- 238000012544 monitoring process Methods 0.000 description 3
- 231100000252 nontoxic Toxicity 0.000 description 3
- 230000003000 nontoxic effect Effects 0.000 description 3
- 108020004707 nucleic acids Proteins 0.000 description 3
- 102000039446 nucleic acids Human genes 0.000 description 3
- 150000007523 nucleic acids Chemical class 0.000 description 3
- QIQXTHQIDYTFRH-UHFFFAOYSA-N octadecanoic acid Chemical compound CCCCCCCCCCCCCCCCCC(O)=O QIQXTHQIDYTFRH-UHFFFAOYSA-N 0.000 description 3
- 239000003921 oil Substances 0.000 description 3
- 235000019198 oils Nutrition 0.000 description 3
- 230000037361 pathway Effects 0.000 description 3
- 230000026731 phosphorylation Effects 0.000 description 3
- 238000006366 phosphorylation reaction Methods 0.000 description 3
- 239000000843 powder Substances 0.000 description 3
- 238000001556 precipitation Methods 0.000 description 3
- 238000011321 prophylaxis Methods 0.000 description 3
- 235000019419 proteases Nutrition 0.000 description 3
- 230000017854 proteolysis Effects 0.000 description 3
- 125000000719 pyrrolidinyl group Chemical group 0.000 description 3
- 230000011664 signaling Effects 0.000 description 3
- 235000010413 sodium alginate Nutrition 0.000 description 3
- 239000000661 sodium alginate Substances 0.000 description 3
- 229940005550 sodium alginate Drugs 0.000 description 3
- 239000011780 sodium chloride Substances 0.000 description 3
- 239000007790 solid phase Substances 0.000 description 3
- 239000003381 stabilizer Substances 0.000 description 3
- 125000000147 tetrahydroquinolinyl group Chemical group N1(CCCC2=CC=CC=C12)* 0.000 description 3
- XJODGRWDFZVTKW-LURJTMIESA-N (2s)-4-methyl-2-(methylamino)pentanoic acid Chemical compound CN[C@H](C(O)=O)CC(C)C XJODGRWDFZVTKW-LURJTMIESA-N 0.000 description 2
- LFOIDLOIBZFWDO-UHFFFAOYSA-N 2-methoxy-6-[6-methoxy-4-[(3-phenylmethoxyphenyl)methoxy]-1-benzofuran-2-yl]imidazo[2,1-b][1,3,4]thiadiazole Chemical compound N1=C2SC(OC)=NN2C=C1C(OC1=CC(OC)=C2)=CC1=C2OCC(C=1)=CC=CC=1OCC1=CC=CC=C1 LFOIDLOIBZFWDO-UHFFFAOYSA-N 0.000 description 2
- 125000001494 2-propynyl group Chemical group [H]C#CC([H])([H])* 0.000 description 2
- LEVAFPORLQQSOQ-UHFFFAOYSA-N 9h-fluoren-9-ylmethyl 3-[(2-methoxy-2-oxoethyl)amino]prop-2-enoate Chemical compound C1=CC=C2C(COC(=O)C=CNCC(=O)OC)C3=CC=CC=C3C2=C1 LEVAFPORLQQSOQ-UHFFFAOYSA-N 0.000 description 2
- JDDWRLPTKIOUOF-UHFFFAOYSA-N 9h-fluoren-9-ylmethyl n-[[4-[2-[bis(4-methylphenyl)methylamino]-2-oxoethoxy]phenyl]-(2,4-dimethoxyphenyl)methyl]carbamate Chemical compound COC1=CC(OC)=CC=C1C(C=1C=CC(OCC(=O)NC(C=2C=CC(C)=CC=2)C=2C=CC(C)=CC=2)=CC=1)NC(=O)OCC1C2=CC=CC=C2C2=CC=CC=C21 JDDWRLPTKIOUOF-UHFFFAOYSA-N 0.000 description 2
- 208000030090 Acute Disease Diseases 0.000 description 2
- 206010001497 Agitation Diseases 0.000 description 2
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 2
- 101800001415 Bri23 peptide Proteins 0.000 description 2
- FERIUCNNQQJTOY-UHFFFAOYSA-N Butyric acid Chemical compound CCCC(O)=O FERIUCNNQQJTOY-UHFFFAOYSA-N 0.000 description 2
- 101800000655 C-terminal peptide Proteins 0.000 description 2
- 102400000107 C-terminal peptide Human genes 0.000 description 2
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 2
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 2
- QXNVGIXVLWOKEQ-UHFFFAOYSA-N Disodium Chemical compound [Na][Na] QXNVGIXVLWOKEQ-UHFFFAOYSA-N 0.000 description 2
- 102000004190 Enzymes Human genes 0.000 description 2
- 108090000790 Enzymes Proteins 0.000 description 2
- LYCAIKOWRPUZTN-UHFFFAOYSA-N Ethylene glycol Chemical compound OCCO LYCAIKOWRPUZTN-UHFFFAOYSA-N 0.000 description 2
- 108010010803 Gelatin Proteins 0.000 description 2
- 208000007465 Giant cell arteritis Diseases 0.000 description 2
- 108010024636 Glutathione Proteins 0.000 description 2
- 102000005720 Glutathione transferase Human genes 0.000 description 2
- 108010070675 Glutathione transferase Proteins 0.000 description 2
- 239000004471 Glycine Substances 0.000 description 2
- 102000004457 Granulocyte-Macrophage Colony-Stimulating Factor Human genes 0.000 description 2
- 108010017213 Granulocyte-Macrophage Colony-Stimulating Factor Proteins 0.000 description 2
- 229920002907 Guar gum Polymers 0.000 description 2
- 206010019939 Herpes gestationis Diseases 0.000 description 2
- 241000282412 Homo Species 0.000 description 2
- SNDPXSYFESPGGJ-BYPYZUCNSA-N L-2-aminopentanoic acid Chemical compound CCC[C@H](N)C(O)=O SNDPXSYFESPGGJ-BYPYZUCNSA-N 0.000 description 2
- ODKSFYDXXFIFQN-BYPYZUCNSA-N L-arginine Chemical compound OC(=O)[C@@H](N)CCCN=C(N)N ODKSFYDXXFIFQN-BYPYZUCNSA-N 0.000 description 2
- CKLJMWTZIZZHCS-REOHCLBHSA-N L-aspartic acid Chemical compound OC(=O)[C@@H](N)CC(O)=O CKLJMWTZIZZHCS-REOHCLBHSA-N 0.000 description 2
- RHGKLRLOHDJJDR-BYPYZUCNSA-N L-citrulline Chemical compound NC(=O)NCCC[C@H]([NH3+])C([O-])=O RHGKLRLOHDJJDR-BYPYZUCNSA-N 0.000 description 2
- WHUUTDBJXJRKMK-VKHMYHEASA-N L-glutamic acid Chemical compound OC(=O)[C@@H](N)CCC(O)=O WHUUTDBJXJRKMK-VKHMYHEASA-N 0.000 description 2
- FFFHZYDWPBMWHY-VKHMYHEASA-N L-homocysteine Chemical group OC(=O)[C@@H](N)CCS FFFHZYDWPBMWHY-VKHMYHEASA-N 0.000 description 2
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 description 2
- SNDPXSYFESPGGJ-UHFFFAOYSA-N L-norVal-OH Natural products CCCC(N)C(O)=O SNDPXSYFESPGGJ-UHFFFAOYSA-N 0.000 description 2
- COLNVLDHVKWLRT-QMMMGPOBSA-N L-phenylalanine Chemical compound OC(=O)[C@@H](N)CC1=CC=CC=C1 COLNVLDHVKWLRT-QMMMGPOBSA-N 0.000 description 2
- OUYCCCASQSFEME-QMMMGPOBSA-N L-tyrosine Chemical compound OC(=O)[C@@H](N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-QMMMGPOBSA-N 0.000 description 2
- 235000010643 Leucaena leucocephala Nutrition 0.000 description 2
- 240000007472 Leucaena leucocephala Species 0.000 description 2
- 206010025323 Lymphomas Diseases 0.000 description 2
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 description 2
- 239000004472 Lysine Substances 0.000 description 2
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 2
- 229920000881 Modified starch Polymers 0.000 description 2
- HSHXDCVZWHOWCS-UHFFFAOYSA-N N'-hexadecylthiophene-2-carbohydrazide Chemical compound CCCCCCCCCCCCCCCCNNC(=O)c1cccs1 HSHXDCVZWHOWCS-UHFFFAOYSA-N 0.000 description 2
- 238000005481 NMR spectroscopy Methods 0.000 description 2
- RHGKLRLOHDJJDR-UHFFFAOYSA-N Ndelta-carbamoyl-DL-ornithine Natural products OC(=O)C(N)CCCNC(N)=O RHGKLRLOHDJJDR-UHFFFAOYSA-N 0.000 description 2
- 102100036893 Parathyroid hormone Human genes 0.000 description 2
- 108090000445 Parathyroid hormone Proteins 0.000 description 2
- 208000008223 Pemphigoid Gestationis Diseases 0.000 description 2
- ISWSIDIOOBJBQZ-UHFFFAOYSA-N Phenol Chemical compound OC1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-N 0.000 description 2
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical compound [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 2
- 239000002202 Polyethylene glycol Substances 0.000 description 2
- 239000004372 Polyvinyl alcohol Substances 0.000 description 2
- 102000001708 Protein Isoforms Human genes 0.000 description 2
- 108010029485 Protein Isoforms Proteins 0.000 description 2
- 102000001253 Protein Kinase Human genes 0.000 description 2
- 208000003251 Pruritus Diseases 0.000 description 2
- 239000012979 RPMI medium Substances 0.000 description 2
- MTCFGRXMJLQNBG-UHFFFAOYSA-N Serine Natural products OCC(N)C(O)=O MTCFGRXMJLQNBG-UHFFFAOYSA-N 0.000 description 2
- XUIMIQQOPSSXEZ-UHFFFAOYSA-N Silicon Chemical compound [Si] XUIMIQQOPSSXEZ-UHFFFAOYSA-N 0.000 description 2
- CDBYLPFSWZWCQE-UHFFFAOYSA-L Sodium Carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 description 2
- VMHLLURERBWHNL-UHFFFAOYSA-M Sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 2
- 235000021355 Stearic acid Nutrition 0.000 description 2
- 229930006000 Sucrose Natural products 0.000 description 2
- QAOWNCQODCNURD-UHFFFAOYSA-L Sulfate Chemical compound [O-]S([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-L 0.000 description 2
- 210000001744 T-lymphocyte Anatomy 0.000 description 2
- AYFVYJQAPQTCCC-UHFFFAOYSA-N Threonine Natural products CC(O)C(N)C(O)=O AYFVYJQAPQTCCC-UHFFFAOYSA-N 0.000 description 2
- 239000004473 Threonine Substances 0.000 description 2
- 208000031981 Thrombocytopenic Idiopathic Purpura Diseases 0.000 description 2
- 206010044314 Tracheobronchitis Diseases 0.000 description 2
- 206010052779 Transplant rejections Diseases 0.000 description 2
- 208000024780 Urticaria Diseases 0.000 description 2
- 238000010521 absorption reaction Methods 0.000 description 2
- DPXJVFZANSGRMM-UHFFFAOYSA-N acetic acid;2,3,4,5,6-pentahydroxyhexanal;sodium Chemical compound [Na].CC(O)=O.OCC(O)C(O)C(O)C(O)C=O DPXJVFZANSGRMM-UHFFFAOYSA-N 0.000 description 2
- 239000012190 activator Substances 0.000 description 2
- 230000002411 adverse Effects 0.000 description 2
- 238000013019 agitation Methods 0.000 description 2
- 125000003368 amide group Chemical group 0.000 description 2
- 239000003963 antioxidant agent Substances 0.000 description 2
- 239000011324 bead Substances 0.000 description 2
- 239000000440 bentonite Substances 0.000 description 2
- 229910000278 bentonite Inorganic materials 0.000 description 2
- 235000012216 bentonite Nutrition 0.000 description 2
- SVPXDRXYRYOSEX-UHFFFAOYSA-N bentoquatam Chemical compound O.O=[Si]=O.O=[Al]O[Al]=O SVPXDRXYRYOSEX-UHFFFAOYSA-N 0.000 description 2
- XAJVDBQLPXNJON-UHFFFAOYSA-N benzyl 2-[3-(9h-fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxopyrrolidin-1-yl]acetate Chemical compound O=C1C(NC(=O)OCC2C3=CC=CC=C3C3=CC=CC=C32)C(O)CN1CC(=O)OCC1=CC=CC=C1 XAJVDBQLPXNJON-UHFFFAOYSA-N 0.000 description 2
- YLAPIBVSYXWMRT-UHFFFAOYSA-N benzyl 2-[3-(9h-fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxopyrrolidin-1-yl]propanoate Chemical compound C1C(O)C(NC(=O)OCC2C3=CC=CC=C3C3=CC=CC=C32)C(=O)N1C(C)C(=O)OCC1=CC=CC=C1 YLAPIBVSYXWMRT-UHFFFAOYSA-N 0.000 description 2
- JDANQLZUCDRHIC-UHFFFAOYSA-N benzyl 3-[3-(9h-fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxopyrrolidin-1-yl]propanoate Chemical compound O=C1C(NC(=O)OCC2C3=CC=CC=C3C3=CC=CC=C32)C(O)CN1CCC(=O)OCC1=CC=CC=C1 JDANQLZUCDRHIC-UHFFFAOYSA-N 0.000 description 2
- WQZGKKKJIJFFOK-VFUOTHLCSA-N beta-D-glucose Chemical compound OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-VFUOTHLCSA-N 0.000 description 2
- 229940000635 beta-alanine Drugs 0.000 description 2
- 150000001576 beta-amino acids Chemical class 0.000 description 2
- 125000001246 bromo group Chemical group Br* 0.000 description 2
- OSGAYBCDTDRGGQ-UHFFFAOYSA-L calcium sulfate Chemical compound [Ca+2].[O-]S([O-])(=O)=O OSGAYBCDTDRGGQ-UHFFFAOYSA-L 0.000 description 2
- 239000000828 canola oil Substances 0.000 description 2
- 235000019519 canola oil Nutrition 0.000 description 2
- 125000004452 carbocyclyl group Chemical group 0.000 description 2
- 239000011203 carbon fibre reinforced carbon Substances 0.000 description 2
- 229920003123 carboxymethyl cellulose sodium Polymers 0.000 description 2
- 229940063834 carboxymethylcellulose sodium Drugs 0.000 description 2
- 150000001768 cations Chemical class 0.000 description 2
- 238000000423 cell based assay Methods 0.000 description 2
- 238000004113 cell culture Methods 0.000 description 2
- 230000005754 cellular signaling Effects 0.000 description 2
- 230000008859 change Effects 0.000 description 2
- 125000001309 chloro group Chemical group Cl* 0.000 description 2
- 210000001612 chondrocyte Anatomy 0.000 description 2
- 235000013477 citrulline Nutrition 0.000 description 2
- 229960002173 citrulline Drugs 0.000 description 2
- 230000009918 complex formation Effects 0.000 description 2
- 230000001010 compromised effect Effects 0.000 description 2
- 238000013270 controlled release Methods 0.000 description 2
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 2
- XVOYSCVBGLVSOL-UHFFFAOYSA-N cysteic acid Chemical compound OC(=O)C(N)CS(O)(=O)=O XVOYSCVBGLVSOL-UHFFFAOYSA-N 0.000 description 2
- NNBZCPXTIHJBJL-UHFFFAOYSA-N decalin Chemical compound C1CCCC2CCCCC21 NNBZCPXTIHJBJL-UHFFFAOYSA-N 0.000 description 2
- 230000007547 defect Effects 0.000 description 2
- ZUOUZKKEUPVFJK-UHFFFAOYSA-N diphenyl Chemical compound C1=CC=CC=C1C1=CC=CC=C1 ZUOUZKKEUPVFJK-UHFFFAOYSA-N 0.000 description 2
- 229910000397 disodium phosphate Inorganic materials 0.000 description 2
- 210000002889 endothelial cell Anatomy 0.000 description 2
- 230000002708 enhancing effect Effects 0.000 description 2
- 230000007515 enzymatic degradation Effects 0.000 description 2
- 229940088598 enzyme Drugs 0.000 description 2
- 230000007717 exclusion Effects 0.000 description 2
- 238000003818 flash chromatography Methods 0.000 description 2
- 201000005206 focal segmental glomerulosclerosis Diseases 0.000 description 2
- 238000009472 formulation Methods 0.000 description 2
- 239000012458 free base Substances 0.000 description 2
- 125000000524 functional group Chemical group 0.000 description 2
- BTCSSZJGUNDROE-UHFFFAOYSA-N gamma-aminobutyric acid Chemical compound NCCCC(O)=O BTCSSZJGUNDROE-UHFFFAOYSA-N 0.000 description 2
- 239000008273 gelatin Substances 0.000 description 2
- 229920000159 gelatin Polymers 0.000 description 2
- 235000019322 gelatine Nutrition 0.000 description 2
- 235000011852 gelatine desserts Nutrition 0.000 description 2
- 238000007429 general method Methods 0.000 description 2
- 239000008103 glucose Substances 0.000 description 2
- 229960003180 glutathione Drugs 0.000 description 2
- 235000010417 guar gum Nutrition 0.000 description 2
- 239000000665 guar gum Substances 0.000 description 2
- 229960002154 guar gum Drugs 0.000 description 2
- 125000004475 heteroaralkyl group Chemical group 0.000 description 2
- 238000000589 high-performance liquid chromatography-mass spectrometry Methods 0.000 description 2
- 235000010979 hydroxypropyl methyl cellulose Nutrition 0.000 description 2
- 239000001866 hydroxypropyl methyl cellulose Substances 0.000 description 2
- 229920003088 hydroxypropyl methyl cellulose Polymers 0.000 description 2
- 210000000987 immune system Anatomy 0.000 description 2
- 230000006872 improvement Effects 0.000 description 2
- 239000012535 impurity Substances 0.000 description 2
- 238000000099 in vitro assay Methods 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 238000011835 investigation Methods 0.000 description 2
- 238000005342 ion exchange Methods 0.000 description 2
- 235000014655 lactic acid Nutrition 0.000 description 2
- 239000007788 liquid Substances 0.000 description 2
- 239000000314 lubricant Substances 0.000 description 2
- HQKMJHAJHXVSDF-UHFFFAOYSA-L magnesium stearate Chemical compound [Mg+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O HQKMJHAJHXVSDF-UHFFFAOYSA-L 0.000 description 2
- HCZKYJDFEPMADG-TXEJJXNPSA-N masoprocol Chemical compound C([C@H](C)[C@H](C)CC=1C=C(O)C(O)=CC=1)C1=CC=C(O)C(O)=C1 HCZKYJDFEPMADG-TXEJJXNPSA-N 0.000 description 2
- 239000011159 matrix material Substances 0.000 description 2
- CZEIACPJNOHGDN-UHFFFAOYSA-N methyl 2-[3-(9h-fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxopyrrolidin-1-yl]-3-(1h-indol-3-yl)propanoate Chemical compound C12=CC=CC=C2C2=CC=CC=C2C1COC(=O)NC(C1=O)C(O)CN1C(C(=O)OC)CC1=CNC2=CC=CC=C12 CZEIACPJNOHGDN-UHFFFAOYSA-N 0.000 description 2
- OLZKBXSNSNBXJS-UHFFFAOYSA-N methyl 2-[3-(9h-fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxopyrrolidin-1-yl]-4-methylpentanoate Chemical compound O=C1N(C(CC(C)C)C(=O)OC)CC(O)C1NC(=O)OCC1C2=CC=CC=C2C2=CC=CC=C21 OLZKBXSNSNBXJS-UHFFFAOYSA-N 0.000 description 2
- 239000002480 mineral oil Substances 0.000 description 2
- 235000010446 mineral oil Nutrition 0.000 description 2
- NKAAEMMYHLFEFN-UHFFFAOYSA-M monosodium tartrate Chemical compound [Na+].OC(=O)C(O)C(O)C([O-])=O NKAAEMMYHLFEFN-UHFFFAOYSA-M 0.000 description 2
- 230000007935 neutral effect Effects 0.000 description 2
- 125000006574 non-aromatic ring group Chemical group 0.000 description 2
- 229940021182 non-steroidal anti-inflammatory drug Drugs 0.000 description 2
- 230000036963 noncompetitive effect Effects 0.000 description 2
- VIKNJXKGJWUCNN-XGXHKTLJSA-N norethisterone Chemical compound O=C1CC[C@@H]2[C@H]3CC[C@](C)([C@](CC4)(O)C#C)[C@@H]4[C@@H]3CCC2=C1 VIKNJXKGJWUCNN-XGXHKTLJSA-N 0.000 description 2
- GLDOVTGHNKAZLK-UHFFFAOYSA-N octadecan-1-ol Chemical compound CCCCCCCCCCCCCCCCCCO GLDOVTGHNKAZLK-UHFFFAOYSA-N 0.000 description 2
- OQCDKBAXFALNLD-UHFFFAOYSA-N octadecanoic acid Natural products CCCCCCCC(C)CCCCCCCCC(O)=O OQCDKBAXFALNLD-UHFFFAOYSA-N 0.000 description 2
- VMDHJFCXMLRQPZ-UHFFFAOYSA-N oxathiazinane Chemical compound C1CNSOC1 VMDHJFCXMLRQPZ-UHFFFAOYSA-N 0.000 description 2
- GMQOZFVOGGIFIX-UHFFFAOYSA-N oxathiazolidine Chemical compound C1COSN1 GMQOZFVOGGIFIX-UHFFFAOYSA-N 0.000 description 2
- 230000003647 oxidation Effects 0.000 description 2
- 238000007254 oxidation reaction Methods 0.000 description 2
- 230000036961 partial effect Effects 0.000 description 2
- 230000007170 pathology Effects 0.000 description 2
- 230000007030 peptide scission Effects 0.000 description 2
- 201000005936 periventricular leukomalacia Diseases 0.000 description 2
- 239000000546 pharmaceutical excipient Substances 0.000 description 2
- 239000000825 pharmaceutical preparation Substances 0.000 description 2
- 229910052698 phosphorus Inorganic materials 0.000 description 2
- 239000011574 phosphorus Substances 0.000 description 2
- 229920001223 polyethylene glycol Polymers 0.000 description 2
- 229920002451 polyvinyl alcohol Polymers 0.000 description 2
- 229940068984 polyvinyl alcohol Drugs 0.000 description 2
- 235000019422 polyvinyl alcohol Nutrition 0.000 description 2
- 229920000036 polyvinylpyrrolidone Polymers 0.000 description 2
- 235000013855 polyvinylpyrrolidone Nutrition 0.000 description 2
- 229940069328 povidone Drugs 0.000 description 2
- 229960002429 proline Drugs 0.000 description 2
- 235000019833 protease Nutrition 0.000 description 2
- 108060006633 protein kinase Proteins 0.000 description 2
- 239000011541 reaction mixture Substances 0.000 description 2
- FSYKKLYZXJSNPZ-UHFFFAOYSA-N sarcosine Chemical compound C[NH2+]CC([O-])=O FSYKKLYZXJSNPZ-UHFFFAOYSA-N 0.000 description 2
- 238000007423 screening assay Methods 0.000 description 2
- 235000004400 serine Nutrition 0.000 description 2
- 229910052710 silicon Inorganic materials 0.000 description 2
- 239000010703 silicon Substances 0.000 description 2
- 208000017520 skin disease Diseases 0.000 description 2
- 229910052708 sodium Inorganic materials 0.000 description 2
- 239000001632 sodium acetate Substances 0.000 description 2
- 235000017281 sodium acetate Nutrition 0.000 description 2
- WXMKPNITSTVMEF-UHFFFAOYSA-M sodium benzoate Chemical compound [Na+].[O-]C(=O)C1=CC=CC=C1 WXMKPNITSTVMEF-UHFFFAOYSA-M 0.000 description 2
- 239000004299 sodium benzoate Substances 0.000 description 2
- 235000010234 sodium benzoate Nutrition 0.000 description 2
- 239000002904 solvent Substances 0.000 description 2
- 108010004034 stable plasma protein solution Proteins 0.000 description 2
- 239000008117 stearic acid Substances 0.000 description 2
- 230000004936 stimulating effect Effects 0.000 description 2
- 239000005720 sucrose Substances 0.000 description 2
- 230000009897 systematic effect Effects 0.000 description 2
- 206010043207 temporal arteritis Diseases 0.000 description 2
- 125000003039 tetrahydroisoquinolinyl group Chemical group C1(NCCC2=CC=CC=C12)* 0.000 description 2
- 125000001712 tetrahydronaphthyl group Chemical group C1(CCCC2=CC=CC=C12)* 0.000 description 2
- 235000008521 threonine Nutrition 0.000 description 2
- 210000001519 tissue Anatomy 0.000 description 2
- VZCYOOQTPOCHFL-UHFFFAOYSA-N trans-butenedioic acid Natural products OC(=O)C=CC(O)=O VZCYOOQTPOCHFL-UHFFFAOYSA-N 0.000 description 2
- 230000009261 transgenic effect Effects 0.000 description 2
- JOYRKODLDBILNP-UHFFFAOYSA-N urethane group Chemical group NC(=O)OCC JOYRKODLDBILNP-UHFFFAOYSA-N 0.000 description 2
- LNPDTQAFDNKSHK-UHFFFAOYSA-N valdecoxib Chemical compound CC=1ON=C(C=2C=CC=CC=2)C=1C1=CC=C(S(N)(=O)=O)C=C1 LNPDTQAFDNKSHK-UHFFFAOYSA-N 0.000 description 2
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 2
- 150000003953 γ-lactams Chemical class 0.000 description 2
- JOOIZTMAHNLNHE-OAQYLSRUSA-N (2r)-2-(9h-fluoren-9-ylmethoxycarbonylamino)-5-[(2-methylpropan-2-yl)oxycarbonylamino]pentanoic acid Chemical compound C1=CC=C2C(COC(=O)N[C@H](CCCNC(=O)OC(C)(C)C)C(O)=O)C3=CC=CC=C3C2=C1 JOOIZTMAHNLNHE-OAQYLSRUSA-N 0.000 description 1
- WDGICUODAOGOMO-PGUFJCEWSA-N (2r)-2-(9h-fluoren-9-ylmethoxycarbonylamino)-5-oxo-5-(tritylamino)pentanoic acid Chemical compound C([C@H](C(=O)O)NC(=O)OCC1C2=CC=CC=C2C2=CC=CC=C21)CC(=O)NC(C=1C=CC=CC=1)(C=1C=CC=CC=1)C1=CC=CC=C1 WDGICUODAOGOMO-PGUFJCEWSA-N 0.000 description 1
- LNAZSHAWQACDHT-XIYTZBAFSA-N (2r,3r,4s,5r,6s)-4,5-dimethoxy-2-(methoxymethyl)-3-[(2s,3r,4s,5r,6r)-3,4,5-trimethoxy-6-(methoxymethyl)oxan-2-yl]oxy-6-[(2r,3r,4s,5r,6r)-4,5,6-trimethoxy-2-(methoxymethyl)oxan-3-yl]oxyoxane Chemical compound CO[C@@H]1[C@@H](OC)[C@H](OC)[C@@H](COC)O[C@H]1O[C@H]1[C@H](OC)[C@@H](OC)[C@H](O[C@H]2[C@@H]([C@@H](OC)[C@H](OC)O[C@@H]2COC)OC)O[C@@H]1COC LNAZSHAWQACDHT-XIYTZBAFSA-N 0.000 description 1
- BVAUMRCGVHUWOZ-ZETCQYMHSA-N (2s)-2-(cyclohexylazaniumyl)propanoate Chemical compound OC(=O)[C@H](C)NC1CCCCC1 BVAUMRCGVHUWOZ-ZETCQYMHSA-N 0.000 description 1
- NPDBDJFLKKQMCM-SCSAIBSYSA-N (2s)-2-amino-3,3-dimethylbutanoic acid Chemical compound CC(C)(C)[C@H](N)C(O)=O NPDBDJFLKKQMCM-SCSAIBSYSA-N 0.000 description 1
- MZOFCQQQCNRIBI-VMXHOPILSA-N (3s)-4-[[(2s)-1-[[(2s)-1-[[(1s)-1-carboxy-2-hydroxyethyl]amino]-4-methyl-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-3-[[2-[[(2s)-2,6-diaminohexanoyl]amino]acetyl]amino]-4-oxobutanoic acid Chemical compound OC[C@@H](C(O)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@H](CC(O)=O)NC(=O)CNC(=O)[C@@H](N)CCCCN MZOFCQQQCNRIBI-VMXHOPILSA-N 0.000 description 1
- HMLGSIZOMSVISS-ONJSNURVSA-N (7r)-7-[[(2z)-2-(2-amino-1,3-thiazol-4-yl)-2-(2,2-dimethylpropanoyloxymethoxyimino)acetyl]amino]-3-ethenyl-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid Chemical compound N([C@@H]1C(N2C(=C(C=C)CSC21)C(O)=O)=O)C(=O)\C(=N/OCOC(=O)C(C)(C)C)C1=CSC(N)=N1 HMLGSIZOMSVISS-ONJSNURVSA-N 0.000 description 1
- WHTVZRBIWZFKQO-AWEZNQCLSA-N (S)-chloroquine Chemical compound ClC1=CC=C2C(N[C@@H](C)CCCN(CC)CC)=CC=NC2=C1 WHTVZRBIWZFKQO-AWEZNQCLSA-N 0.000 description 1
- AHQFCPOIMVMDEZ-UNISNWAASA-N (e,2s,3r,4r)-3-hydroxy-4-methyl-2-(methylamino)oct-6-enoic acid Chemical compound CN[C@H](C(O)=O)[C@H](O)[C@H](C)C\C=C\C AHQFCPOIMVMDEZ-UNISNWAASA-N 0.000 description 1
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 1
- IQFYYKKMVGJFEH-OFKYTIFKSA-N 1-[(2r,4s,5r)-4-hydroxy-5-(tritiooxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione Chemical compound C1[C@H](O)[C@@H](CO[3H])O[C@H]1N1C(=O)NC(=O)C(C)=C1 IQFYYKKMVGJFEH-OFKYTIFKSA-N 0.000 description 1
- 125000000530 1-propynyl group Chemical group [H]C([H])([H])C#C* 0.000 description 1
- OWEGMIWEEQEYGQ-UHFFFAOYSA-N 100676-05-9 Natural products OC1C(O)C(O)C(CO)OC1OCC1C(O)C(O)C(O)C(OC2C(OC(O)C(O)C2O)CO)O1 OWEGMIWEEQEYGQ-UHFFFAOYSA-N 0.000 description 1
- FUNUTBJJKQIVSY-UHFFFAOYSA-N 2,4-Dichlorotoluene Chemical compound CC1=CC=C(Cl)C=C1Cl FUNUTBJJKQIVSY-UHFFFAOYSA-N 0.000 description 1
- UPMGJEMWPQOACJ-UHFFFAOYSA-N 2-[4-[(2,4-dimethoxyphenyl)-(9h-fluoren-9-ylmethoxycarbonylamino)methyl]phenoxy]acetic acid Chemical compound COC1=CC(OC)=CC=C1C(C=1C=CC(OCC(O)=O)=CC=1)NC(=O)OCC1C2=CC=CC=C2C2=CC=CC=C21 UPMGJEMWPQOACJ-UHFFFAOYSA-N 0.000 description 1
- DLLGKQWENXRXHB-UHFFFAOYSA-N 2-[9h-fluoren-9-ylmethoxycarbonyl(oxiran-2-yl)amino]acetic acid Chemical compound C12=CC=CC=C2C2=CC=CC=C2C1COC(=O)N(CC(=O)O)C1CO1 DLLGKQWENXRXHB-UHFFFAOYSA-N 0.000 description 1
- FMKGJQHNYMWDFJ-CVEARBPZSA-N 2-[[4-(2,2-difluoropropoxy)pyrimidin-5-yl]methylamino]-4-[[(1R,4S)-4-hydroxy-3,3-dimethylcyclohexyl]amino]pyrimidine-5-carbonitrile Chemical compound FC(COC1=NC=NC=C1CNC1=NC=C(C(=N1)N[C@H]1CC([C@H](CC1)O)(C)C)C#N)(C)F FMKGJQHNYMWDFJ-CVEARBPZSA-N 0.000 description 1
- 125000003903 2-propenyl group Chemical group [H]C([*])([H])C([H])=C([H])[H] 0.000 description 1
- GNBXSXWCRFYWBT-UHFFFAOYSA-N 3,5,6,7,8,8a-hexahydro-1h-indolizin-2-one Chemical compound C1CCCN2CC(=O)CC21 GNBXSXWCRFYWBT-UHFFFAOYSA-N 0.000 description 1
- GSQLNIVPNDDIHU-UHFFFAOYSA-N 3,5,6,7,8,8a-hexahydro-2h-indolizin-1-one Chemical class C1CCCC2C(=O)CCN21 GSQLNIVPNDDIHU-UHFFFAOYSA-N 0.000 description 1
- BRMWTNUJHUMWMS-UHFFFAOYSA-N 3-Methylhistidine Natural products CN1C=NC(CC(N)C(O)=O)=C1 BRMWTNUJHUMWMS-UHFFFAOYSA-N 0.000 description 1
- NHQDETIJWKXCTC-UHFFFAOYSA-N 3-chloroperbenzoic acid Chemical compound OOC(=O)C1=CC=CC(Cl)=C1 NHQDETIJWKXCTC-UHFFFAOYSA-N 0.000 description 1
- FZTIWOBQQYPTCJ-UHFFFAOYSA-N 4-[4-(4-carboxyphenyl)phenyl]benzoic acid Chemical compound C1=CC(C(=O)O)=CC=C1C1=CC=C(C=2C=CC(=CC=2)C(O)=O)C=C1 FZTIWOBQQYPTCJ-UHFFFAOYSA-N 0.000 description 1
- WYFCZWSWFGJODV-MIANJLSGSA-N 4-[[(1s)-2-[(e)-3-[3-chloro-2-fluoro-6-(tetrazol-1-yl)phenyl]prop-2-enoyl]-5-(4-methyl-2-oxopiperazin-1-yl)-3,4-dihydro-1h-isoquinoline-1-carbonyl]amino]benzoic acid Chemical compound O=C1CN(C)CCN1C1=CC=CC2=C1CCN(C(=O)\C=C\C=1C(=CC=C(Cl)C=1F)N1N=NN=C1)[C@@H]2C(=O)NC1=CC=C(C(O)=O)C=C1 WYFCZWSWFGJODV-MIANJLSGSA-N 0.000 description 1
- ALYNCZNDIQEVRV-UHFFFAOYSA-N 4-aminobenzoic acid Chemical compound NC1=CC=C(C(O)=O)C=C1 ALYNCZNDIQEVRV-UHFFFAOYSA-N 0.000 description 1
- 125000002471 4H-quinolizinyl group Chemical group C=1(C=CCN2C=CC=CC12)* 0.000 description 1
- SLXKOJJOQWFEFD-UHFFFAOYSA-N 6-aminohexanoic acid Chemical compound NCCCCCC(O)=O SLXKOJJOQWFEFD-UHFFFAOYSA-N 0.000 description 1
- ZCYVEMRRCGMTRW-UHFFFAOYSA-N 7553-56-2 Chemical compound [I] ZCYVEMRRCGMTRW-UHFFFAOYSA-N 0.000 description 1
- XGWFJBFNAQHLEF-UHFFFAOYSA-N 9-anthroic acid Chemical compound C1=CC=C2C(C(=O)O)=C(C=CC=C3)C3=CC2=C1 XGWFJBFNAQHLEF-UHFFFAOYSA-N 0.000 description 1
- QTBSBXVTEAMEQO-UHFFFAOYSA-M Acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 description 1
- 208000002874 Acne Vulgaris Diseases 0.000 description 1
- 241000251468 Actinopterygii Species 0.000 description 1
- 206010000748 Acute febrile neutrophilic dermatosis Diseases 0.000 description 1
- 208000026872 Addison Disease Diseases 0.000 description 1
- 102000009027 Albumins Human genes 0.000 description 1
- 108010088751 Albumins Proteins 0.000 description 1
- GUBGYTABKSRVRQ-XLOQQCSPSA-N Alpha-Lactose Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-XLOQQCSPSA-N 0.000 description 1
- QGZKDVFQNNGYKY-UHFFFAOYSA-O Ammonium Chemical class [NH4+] QGZKDVFQNNGYKY-UHFFFAOYSA-O 0.000 description 1
- 229920000856 Amylose Polymers 0.000 description 1
- 208000019901 Anxiety disease Diseases 0.000 description 1
- 239000004475 Arginine Substances 0.000 description 1
- DCXYFEDJOCDNAF-UHFFFAOYSA-N Asparagine Natural products OC(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-N 0.000 description 1
- 241000416162 Astragalus gummifer Species 0.000 description 1
- 206010003827 Autoimmune hepatitis Diseases 0.000 description 1
- 241000271566 Aves Species 0.000 description 1
- 208000009137 Behcet syndrome Diseases 0.000 description 1
- 208000006373 Bell palsy Diseases 0.000 description 1
- BTBUEUYNUDRHOZ-UHFFFAOYSA-N Borate Chemical compound [O-]B([O-])[O-] BTBUEUYNUDRHOZ-UHFFFAOYSA-N 0.000 description 1
- 241000283690 Bos taurus Species 0.000 description 1
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical compound [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 description 1
- 239000007848 Bronsted acid Substances 0.000 description 1
- MNAPFNMHJCEIAM-FIJBEKLTSA-N CC(C)CC(C(N)=O)NC([C@@H](CCC(O)=O)NC([C@@H](CC[C@H]1CC[C@H]2NC([C@@H](Cc(cc3)ccc3O)N(CC[C@H]3N)C3=O)=O)N1C2=O)=O)=O Chemical compound CC(C)CC(C(N)=O)NC([C@@H](CCC(O)=O)NC([C@@H](CC[C@H]1CC[C@H]2NC([C@@H](Cc(cc3)ccc3O)N(CC[C@H]3N)C3=O)=O)N1C2=O)=O)=O MNAPFNMHJCEIAM-FIJBEKLTSA-N 0.000 description 1
- FLFGNZDRGZCTPA-XIISLEHMSA-N CC(C)C[C@H](C(N[C@H](C)C(N)=O)=O)NC([C@@H](CCC(O)=O)N(C[C@@H](C1)NC([C@@H]([C@@H](C)O)NC([C@@H](Cc(cc2)ccc2O)NC([C@@H](CCCNC(N)=N)N)=O)=O)=O)C1=O)=O Chemical compound CC(C)C[C@H](C(N[C@H](C)C(N)=O)=O)NC([C@@H](CCC(O)=O)N(C[C@@H](C1)NC([C@@H]([C@@H](C)O)NC([C@@H](Cc(cc2)ccc2O)NC([C@@H](CCCNC(N)=N)N)=O)=O)=O)C1=O)=O FLFGNZDRGZCTPA-XIISLEHMSA-N 0.000 description 1
- BYCNNUDZLMKOKD-ROFMYCQRSA-N CC(C)C[C@H](C(N[C@H](C)C(N)=O)=O)NC([C@@H](CCC(O)=O)NC([C@@H](C(C)C)NC([C@@H]([C@@H](C)O)NCC[C@H](C(OCc1ccccc1)=O)NC([C@@H](CCCCNC(N)=N)N)=O)=O)=O)=O Chemical compound CC(C)C[C@H](C(N[C@H](C)C(N)=O)=O)NC([C@@H](CCC(O)=O)NC([C@@H](C(C)C)NC([C@@H]([C@@H](C)O)NCC[C@H](C(OCc1ccccc1)=O)NC([C@@H](CCCCNC(N)=N)N)=O)=O)=O)=O BYCNNUDZLMKOKD-ROFMYCQRSA-N 0.000 description 1
- 101150041968 CDC13 gene Proteins 0.000 description 1
- 239000004215 Carbon black (E152) Substances 0.000 description 1
- 206010007710 Cartilage injury Diseases 0.000 description 1
- 102000005600 Cathepsins Human genes 0.000 description 1
- 108010084457 Cathepsins Proteins 0.000 description 1
- 241000282693 Cercopithecidae Species 0.000 description 1
- 206010008120 Cerebral ischaemia Diseases 0.000 description 1
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 description 1
- 208000000094 Chronic Pain Diseases 0.000 description 1
- KRKNYBCHXYNGOX-UHFFFAOYSA-K Citrate Chemical compound [O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O KRKNYBCHXYNGOX-UHFFFAOYSA-K 0.000 description 1
- 208000010007 Cogan syndrome Diseases 0.000 description 1
- 206010010539 Congenital megacolon Diseases 0.000 description 1
- 241000938605 Crocodylia Species 0.000 description 1
- 208000014311 Cushing syndrome Diseases 0.000 description 1
- 108010069514 Cyclic Peptides Proteins 0.000 description 1
- 102000001189 Cyclic Peptides Human genes 0.000 description 1
- 229920000858 Cyclodextrin Polymers 0.000 description 1
- FBPFZTCFMRRESA-FSIIMWSLSA-N D-Glucitol Natural products OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)CO FBPFZTCFMRRESA-FSIIMWSLSA-N 0.000 description 1
- QNAYBMKLOCPYGJ-UHFFFAOYSA-N D-alpha-Ala Natural products CC([NH3+])C([O-])=O QNAYBMKLOCPYGJ-UHFFFAOYSA-N 0.000 description 1
- 125000002038 D-arginyl group Chemical group N[C@@H](C(=O)*)CCCNC(=N)N 0.000 description 1
- FBPFZTCFMRRESA-JGWLITMVSA-N D-glucitol Chemical compound OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO FBPFZTCFMRRESA-JGWLITMVSA-N 0.000 description 1
- KDXKERNSBIXSRK-RXMQYKEDSA-N D-lysine Chemical compound NCCCC[C@@H](N)C(O)=O KDXKERNSBIXSRK-RXMQYKEDSA-N 0.000 description 1
- FFEARJCKVFRZRR-SCSAIBSYSA-N D-methionine Chemical compound CSCC[C@@H](N)C(O)=O FFEARJCKVFRZRR-SCSAIBSYSA-N 0.000 description 1
- 125000000197 D-threonyl group Chemical group N[C@@H](C(=O)*)[C@H](C)O 0.000 description 1
- 101150049660 DRD2 gene Proteins 0.000 description 1
- 206010012442 Dermatitis contact Diseases 0.000 description 1
- 206010012455 Dermatitis exfoliative Diseases 0.000 description 1
- YZCKVEUIGOORGS-OUBTZVSYSA-N Deuterium Chemical compound [2H] YZCKVEUIGOORGS-OUBTZVSYSA-N 0.000 description 1
- 229920001353 Dextrin Polymers 0.000 description 1
- 239000004375 Dextrin Substances 0.000 description 1
- FEWJPZIEWOKRBE-JCYAYHJZSA-N Dextrotartaric acid Chemical compound OC(=O)[C@H](O)[C@@H](O)C(O)=O FEWJPZIEWOKRBE-JCYAYHJZSA-N 0.000 description 1
- 206010012735 Diarrhoea Diseases 0.000 description 1
- 235000019739 Dicalciumphosphate Nutrition 0.000 description 1
- 208000006926 Discoid Lupus Erythematosus Diseases 0.000 description 1
- 239000003109 Disodium ethylene diamine tetraacetate Substances 0.000 description 1
- SNRUBQQJIBEYMU-UHFFFAOYSA-N Dodecane Natural products CCCCCCCCCCCC SNRUBQQJIBEYMU-UHFFFAOYSA-N 0.000 description 1
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 1
- 241000196324 Embryophyta Species 0.000 description 1
- 206010014954 Eosinophilic fasciitis Diseases 0.000 description 1
- 206010015226 Erythema nodosum Diseases 0.000 description 1
- 108010008165 Etanercept Proteins 0.000 description 1
- 239000001856 Ethyl cellulose Substances 0.000 description 1
- ZZSNKZQZMQGXPY-UHFFFAOYSA-N Ethyl cellulose Chemical compound CCOCC1OC(OC)C(OCC)C(OCC)C1OC1C(O)C(O)C(OC)C(CO)O1 ZZSNKZQZMQGXPY-UHFFFAOYSA-N 0.000 description 1
- 208000009386 Experimental Arthritis Diseases 0.000 description 1
- 241000282326 Felis catus Species 0.000 description 1
- 208000001640 Fibromyalgia Diseases 0.000 description 1
- PXGOKWXKJXAPGV-UHFFFAOYSA-N Fluorine Chemical compound FF PXGOKWXKJXAPGV-UHFFFAOYSA-N 0.000 description 1
- CBPJQFCAFFNICX-LJQANCHMSA-N Fmoc-D-Leu-OH Chemical compound C1=CC=C2C(COC(=O)N[C@H](CC(C)C)C(O)=O)C3=CC=CC=C3C2=C1 CBPJQFCAFFNICX-LJQANCHMSA-N 0.000 description 1
- VZCYOOQTPOCHFL-OWOJBTEDSA-N Fumaric acid Chemical compound OC(=O)\C=C\C(O)=O VZCYOOQTPOCHFL-OWOJBTEDSA-N 0.000 description 1
- 108700012941 GNRH1 Proteins 0.000 description 1
- 208000018522 Gastrointestinal disease Diseases 0.000 description 1
- WHUUTDBJXJRKMK-UHFFFAOYSA-N Glutamic acid Natural products OC(=O)C(N)CCC(O)=O WHUUTDBJXJRKMK-UHFFFAOYSA-N 0.000 description 1
- 108090000288 Glycoproteins Proteins 0.000 description 1
- 102000003886 Glycoproteins Human genes 0.000 description 1
- 239000000579 Gonadotropin-Releasing Hormone Substances 0.000 description 1
- 206010018634 Gouty Arthritis Diseases 0.000 description 1
- 206010072579 Granulomatosis with polyangiitis Diseases 0.000 description 1
- 206010019233 Headaches Diseases 0.000 description 1
- 208000035186 Hemolytic Autoimmune Anemia Diseases 0.000 description 1
- 208000007514 Herpes zoster Diseases 0.000 description 1
- 241000238631 Hexapoda Species 0.000 description 1
- 208000004592 Hirschsprung disease Diseases 0.000 description 1
- 206010020112 Hirsutism Diseases 0.000 description 1
- 201000002563 Histoplasmosis Diseases 0.000 description 1
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 1
- CPELXLSAUQHCOX-UHFFFAOYSA-N Hydrogen bromide Chemical compound Br CPELXLSAUQHCOX-UHFFFAOYSA-N 0.000 description 1
- 239000004354 Hydroxyethyl cellulose Substances 0.000 description 1
- 229920000663 Hydroxyethyl cellulose Polymers 0.000 description 1
- PMMYEEVYMWASQN-DMTCNVIQSA-N Hydroxyproline Chemical compound O[C@H]1CN[C@H](C(O)=O)C1 PMMYEEVYMWASQN-DMTCNVIQSA-N 0.000 description 1
- 206010020751 Hypersensitivity Diseases 0.000 description 1
- 206010020772 Hypertension Diseases 0.000 description 1
- 201000009794 Idiopathic Pulmonary Fibrosis Diseases 0.000 description 1
- 206010021245 Idiopathic thrombocytopenic purpura Diseases 0.000 description 1
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical class C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 1
- 208000028622 Immune thrombocytopenia Diseases 0.000 description 1
- 102000051628 Interleukin-1 receptor antagonist Human genes 0.000 description 1
- 108700021006 Interleukin-1 receptor antagonist Proteins 0.000 description 1
- 102000015696 Interleukins Human genes 0.000 description 1
- 108010063738 Interleukins Proteins 0.000 description 1
- 239000007836 KH2PO4 Substances 0.000 description 1
- 235000019766 L-Lysine Nutrition 0.000 description 1
- AHLPHDHHMVZTML-BYPYZUCNSA-N L-Ornithine Chemical compound NCCC[C@H](N)C(O)=O AHLPHDHHMVZTML-BYPYZUCNSA-N 0.000 description 1
- ONIBWKKTOPOVIA-BYPYZUCNSA-N L-Proline Chemical compound OC(=O)[C@@H]1CCCN1 ONIBWKKTOPOVIA-BYPYZUCNSA-N 0.000 description 1
- QNAYBMKLOCPYGJ-REOHCLBHSA-N L-alanine Chemical compound C[C@H](N)C(O)=O QNAYBMKLOCPYGJ-REOHCLBHSA-N 0.000 description 1
- ZGUNAGUHMKGQNY-ZETCQYMHSA-N L-alpha-phenylglycine zwitterion Chemical compound OC(=O)[C@@H](N)C1=CC=CC=C1 ZGUNAGUHMKGQNY-ZETCQYMHSA-N 0.000 description 1
- ODKSFYDXXFIFQN-BYPYZUCNSA-P L-argininium(2+) Chemical compound NC(=[NH2+])NCCC[C@H]([NH3+])C(O)=O ODKSFYDXXFIFQN-BYPYZUCNSA-P 0.000 description 1
- DCXYFEDJOCDNAF-REOHCLBHSA-N L-asparagine Chemical compound OC(=O)[C@@H](N)CC(N)=O DCXYFEDJOCDNAF-REOHCLBHSA-N 0.000 description 1
- ZDXPYRJPNDTMRX-VKHMYHEASA-N L-glutamine Chemical compound OC(=O)[C@@H](N)CCC(N)=O ZDXPYRJPNDTMRX-VKHMYHEASA-N 0.000 description 1
- HNDVDQJCIGZPNO-YFKPBYRVSA-N L-histidine Chemical compound OC(=O)[C@@H](N)CC1=CN=CN1 HNDVDQJCIGZPNO-YFKPBYRVSA-N 0.000 description 1
- AGPKZVBTJJNPAG-WHFBIAKZSA-N L-isoleucine Chemical compound CC[C@H](C)[C@H](N)C(O)=O AGPKZVBTJJNPAG-WHFBIAKZSA-N 0.000 description 1
- ROHFNLRQFUQHCH-YFKPBYRVSA-N L-leucine Chemical compound CC(C)C[C@H](N)C(O)=O ROHFNLRQFUQHCH-YFKPBYRVSA-N 0.000 description 1
- FBOZXECLQNJBKD-ZDUSSCGKSA-N L-methotrexate Chemical compound C=1N=C2N=C(N)N=C(N)C2=NC=1CN(C)C1=CC=C(C(=O)N[C@@H](CCC(O)=O)C(O)=O)C=C1 FBOZXECLQNJBKD-ZDUSSCGKSA-N 0.000 description 1
- LRQKBLKVPFOOQJ-YFKPBYRVSA-N L-norleucine Chemical compound CCCC[C@H]([NH3+])C([O-])=O LRQKBLKVPFOOQJ-YFKPBYRVSA-N 0.000 description 1
- QIVBCDIJIAJPQS-VIFPVBQESA-N L-tryptophane Chemical compound C1=CC=C2C(C[C@H](N)C(O)=O)=CNC2=C1 QIVBCDIJIAJPQS-VIFPVBQESA-N 0.000 description 1
- KZSNJWFQEVHDMF-BYPYZUCNSA-N L-valine Chemical compound CC(C)[C@H](N)C(O)=O KZSNJWFQEVHDMF-BYPYZUCNSA-N 0.000 description 1
- RQVLGLPAZTUBKX-VKHMYHEASA-N L-vinylglycine Chemical compound C=C[C@H](N)C(O)=O RQVLGLPAZTUBKX-VKHMYHEASA-N 0.000 description 1
- GUBGYTABKSRVRQ-QKKXKWKRSA-N Lactose Natural products OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)C(O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O GUBGYTABKSRVRQ-QKKXKWKRSA-N 0.000 description 1
- 239000002841 Lewis acid Substances 0.000 description 1
- WHXSMMKQMYFTQS-UHFFFAOYSA-N Lithium Chemical class [Li] WHXSMMKQMYFTQS-UHFFFAOYSA-N 0.000 description 1
- 208000001344 Macular Edema Diseases 0.000 description 1
- 206010025415 Macular oedema Diseases 0.000 description 1
- FYYHWMGAXLPEAU-UHFFFAOYSA-N Magnesium Chemical class [Mg] FYYHWMGAXLPEAU-UHFFFAOYSA-N 0.000 description 1
- 206010025477 Malabsorption conditions Diseases 0.000 description 1
- 229920002774 Maltodextrin Polymers 0.000 description 1
- 239000005913 Maltodextrin Substances 0.000 description 1
- GUBGYTABKSRVRQ-PICCSMPSSA-N Maltose Natural products O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1O[C@@H]1[C@@H](CO)OC(O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-PICCSMPSSA-N 0.000 description 1
- 208000019695 Migraine disease Diseases 0.000 description 1
- 241000699670 Mus sp. Species 0.000 description 1
- 201000002481 Myositis Diseases 0.000 description 1
- JDHILDINMRGULE-LURJTMIESA-N N(pros)-methyl-L-histidine Chemical compound CN1C=NC=C1C[C@H](N)C(O)=O JDHILDINMRGULE-LURJTMIESA-N 0.000 description 1
- GXCLVBGFBYZDAG-UHFFFAOYSA-N N-[2-(1H-indol-3-yl)ethyl]-N-methylprop-2-en-1-amine Chemical compound CN(CCC1=CNC2=C1C=CC=C2)CC=C GXCLVBGFBYZDAG-UHFFFAOYSA-N 0.000 description 1
- JJIHLJJYMXLCOY-BYPYZUCNSA-N N-acetyl-L-serine Chemical compound CC(=O)N[C@@H](CO)C(O)=O JJIHLJJYMXLCOY-BYPYZUCNSA-N 0.000 description 1
- PYUSHNKNPOHWEZ-YFKPBYRVSA-N N-formyl-L-methionine Chemical compound CSCC[C@@H](C(O)=O)NC=O PYUSHNKNPOHWEZ-YFKPBYRVSA-N 0.000 description 1
- GDFAOVXKHJXLEI-VKHMYHEASA-N N-methyl-L-alanine Chemical compound C[NH2+][C@@H](C)C([O-])=O GDFAOVXKHJXLEI-VKHMYHEASA-N 0.000 description 1
- 125000000729 N-terminal amino-acid group Chemical group 0.000 description 1
- 101800000597 N-terminal peptide Proteins 0.000 description 1
- 102400000108 N-terminal peptide Human genes 0.000 description 1
- AHLPHDHHMVZTML-UHFFFAOYSA-N Orn-delta-NH2 Natural products NCCCC(N)C(O)=O AHLPHDHHMVZTML-UHFFFAOYSA-N 0.000 description 1
- UTJLXEIPEHZYQJ-UHFFFAOYSA-N Ornithine Natural products OC(=O)C(C)CCCN UTJLXEIPEHZYQJ-UHFFFAOYSA-N 0.000 description 1
- 241000283973 Oryctolagus cuniculus Species 0.000 description 1
- 240000007594 Oryza sativa Species 0.000 description 1
- 235000007164 Oryza sativa Nutrition 0.000 description 1
- MUBZPKHOEPUJKR-UHFFFAOYSA-N Oxalic acid Chemical compound OC(=O)C(O)=O MUBZPKHOEPUJKR-UHFFFAOYSA-N 0.000 description 1
- 101710195703 Oxygen-dependent coproporphyrinogen-III oxidase Proteins 0.000 description 1
- 102100036201 Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial Human genes 0.000 description 1
- 101710200437 Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial Proteins 0.000 description 1
- 229910019142 PO4 Inorganic materials 0.000 description 1
- 208000018737 Parkinson disease Diseases 0.000 description 1
- 235000019483 Peanut oil Nutrition 0.000 description 1
- 241001494479 Pecora Species 0.000 description 1
- 206010034277 Pemphigoid Diseases 0.000 description 1
- 201000011152 Pemphigus Diseases 0.000 description 1
- BYPFEZZEUUWMEJ-UHFFFAOYSA-N Pentoxifylline Chemical compound O=C1N(CCCCC(=O)C)C(=O)N(C)C2=C1N(C)C=N2 BYPFEZZEUUWMEJ-UHFFFAOYSA-N 0.000 description 1
- 102000015731 Peptide Hormones Human genes 0.000 description 1
- 108010038988 Peptide Hormones Proteins 0.000 description 1
- RVGRUAULSDPKGF-UHFFFAOYSA-N Poloxamer Chemical compound C1CO1.CC1CO1 RVGRUAULSDPKGF-UHFFFAOYSA-N 0.000 description 1
- 229920003171 Poly (ethylene oxide) Polymers 0.000 description 1
- 208000007048 Polymyalgia Rheumatica Diseases 0.000 description 1
- 229920001710 Polyorthoester Polymers 0.000 description 1
- ZLMJMSJWJFRBEC-UHFFFAOYSA-N Potassium Chemical class [K] ZLMJMSJWJFRBEC-UHFFFAOYSA-N 0.000 description 1
- 241000288906 Primates Species 0.000 description 1
- ONIBWKKTOPOVIA-UHFFFAOYSA-N Proline Natural products OC(=O)C1CCCN1 ONIBWKKTOPOVIA-UHFFFAOYSA-N 0.000 description 1
- HDSBZMRLPLPFLQ-UHFFFAOYSA-N Propylene glycol alginate Chemical compound OC1C(O)C(OC)OC(C(O)=O)C1OC1C(O)C(O)C(C)C(C(=O)OCC(C)O)O1 HDSBZMRLPLPFLQ-UHFFFAOYSA-N 0.000 description 1
- 102100038280 Prostaglandin G/H synthase 2 Human genes 0.000 description 1
- 108050003267 Prostaglandin G/H synthase 2 Proteins 0.000 description 1
- 102000003923 Protein Kinase C Human genes 0.000 description 1
- 102000016611 Proteoglycans Human genes 0.000 description 1
- 108010067787 Proteoglycans Proteins 0.000 description 1
- 206010037423 Pulmonary oedema Diseases 0.000 description 1
- 206010037660 Pyrexia Diseases 0.000 description 1
- 241000283984 Rodentia Species 0.000 description 1
- 108010017324 STAT3 Transcription Factor Proteins 0.000 description 1
- 108010077895 Sarcosine Proteins 0.000 description 1
- 206010039705 Scleritis Diseases 0.000 description 1
- 206010070834 Sensitisation Diseases 0.000 description 1
- 229920002684 Sepharose Polymers 0.000 description 1
- 102100024040 Signal transducer and activator of transcription 3 Human genes 0.000 description 1
- DBMJMQXJHONAFJ-UHFFFAOYSA-M Sodium laurylsulphate Chemical compound [Na+].CCCCCCCCCCCCOS([O-])(=O)=O DBMJMQXJHONAFJ-UHFFFAOYSA-M 0.000 description 1
- 206010042033 Stevens-Johnson syndrome Diseases 0.000 description 1
- 208000010265 Sweet syndrome Diseases 0.000 description 1
- 201000009594 Systemic Scleroderma Diseases 0.000 description 1
- 206010042953 Systemic sclerosis Diseases 0.000 description 1
- 102000003141 Tachykinin Human genes 0.000 description 1
- 208000001106 Takayasu Arteritis Diseases 0.000 description 1
- 208000000491 Tendinopathy Diseases 0.000 description 1
- 206010043255 Tendonitis Diseases 0.000 description 1
- 206010044223 Toxic epidermal necrolysis Diseases 0.000 description 1
- 231100000087 Toxic epidermal necrolysis Toxicity 0.000 description 1
- 229920001615 Tragacanth Polymers 0.000 description 1
- YZCKVEUIGOORGS-NJFSPNSNSA-N Tritium Chemical compound [3H] YZCKVEUIGOORGS-NJFSPNSNSA-N 0.000 description 1
- QIVBCDIJIAJPQS-UHFFFAOYSA-N Tryptophan Natural products C1=CC=C2C(CC(N)C(O)=O)=CNC2=C1 QIVBCDIJIAJPQS-UHFFFAOYSA-N 0.000 description 1
- 108060008682 Tumor Necrosis Factor Proteins 0.000 description 1
- 108060008683 Tumor Necrosis Factor Receptor Proteins 0.000 description 1
- 102000000852 Tumor Necrosis Factor-alpha Human genes 0.000 description 1
- 102100040247 Tumor necrosis factor Human genes 0.000 description 1
- 206010067584 Type 1 diabetes mellitus Diseases 0.000 description 1
- 206010046851 Uveitis Diseases 0.000 description 1
- 208000036826 VIIth nerve paralysis Diseases 0.000 description 1
- KZSNJWFQEVHDMF-UHFFFAOYSA-N Valine Natural products CC(C)C(N)C(O)=O KZSNJWFQEVHDMF-UHFFFAOYSA-N 0.000 description 1
- 206010047700 Vomiting Diseases 0.000 description 1
- 229920002494 Zein Polymers 0.000 description 1
- 230000002159 abnormal effect Effects 0.000 description 1
- 206010000496 acne Diseases 0.000 description 1
- 125000000641 acridinyl group Chemical group C1(=CC=CC2=NC3=CC=CC=C3C=C12)* 0.000 description 1
- 230000003213 activating effect Effects 0.000 description 1
- 208000038016 acute inflammation Diseases 0.000 description 1
- 230000006022 acute inflammation Effects 0.000 description 1
- 229960002964 adalimumab Drugs 0.000 description 1
- 239000000654 additive Substances 0.000 description 1
- 239000002671 adjuvant Substances 0.000 description 1
- 235000004279 alanine Nutrition 0.000 description 1
- 125000003295 alanine group Chemical group N[C@@H](C)C(=O)* 0.000 description 1
- 229940050528 albumin Drugs 0.000 description 1
- 229910052783 alkali metal Inorganic materials 0.000 description 1
- 150000001340 alkali metals Chemical class 0.000 description 1
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 1
- 150000001342 alkaline earth metals Chemical class 0.000 description 1
- 201000009961 allergic asthma Diseases 0.000 description 1
- 208000026935 allergic disease Diseases 0.000 description 1
- 201000010435 allergic urticaria Diseases 0.000 description 1
- HSFWRNGVRCDJHI-UHFFFAOYSA-N alpha-acetylene Natural products C#C HSFWRNGVRCDJHI-UHFFFAOYSA-N 0.000 description 1
- 150000001370 alpha-amino acid derivatives Chemical class 0.000 description 1
- 230000004075 alteration Effects 0.000 description 1
- 150000003862 amino acid derivatives Chemical class 0.000 description 1
- 125000004103 aminoalkyl group Chemical group 0.000 description 1
- 229960004050 aminobenzoic acid Drugs 0.000 description 1
- 229960002684 aminocaproic acid Drugs 0.000 description 1
- 229910021529 ammonia Inorganic materials 0.000 description 1
- 150000003863 ammonium salts Chemical class 0.000 description 1
- 229960004238 anakinra Drugs 0.000 description 1
- 230000033115 angiogenesis Effects 0.000 description 1
- 239000010775 animal oil Substances 0.000 description 1
- 229940124599 anti-inflammatory drug Drugs 0.000 description 1
- 230000000692 anti-sense effect Effects 0.000 description 1
- 239000003435 antirheumatic agent Substances 0.000 description 1
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 description 1
- 125000003435 aroyl group Chemical group 0.000 description 1
- 230000002917 arthritic effect Effects 0.000 description 1
- 210000001188 articular cartilage Anatomy 0.000 description 1
- 125000003710 aryl alkyl group Chemical group 0.000 description 1
- 125000005160 aryl oxy alkyl group Chemical group 0.000 description 1
- 235000009582 asparagine Nutrition 0.000 description 1
- 229960001230 asparagine Drugs 0.000 description 1
- 235000003704 aspartic acid Nutrition 0.000 description 1
- 210000001130 astrocyte Anatomy 0.000 description 1
- 201000000448 autoimmune hemolytic anemia Diseases 0.000 description 1
- 201000003710 autoimmune thrombocytopenic purpura Diseases 0.000 description 1
- 210000003719 b-lymphocyte Anatomy 0.000 description 1
- 229910052788 barium Inorganic materials 0.000 description 1
- DSAJWYNOEDNPEQ-UHFFFAOYSA-N barium atom Chemical class [Ba] DSAJWYNOEDNPEQ-UHFFFAOYSA-N 0.000 description 1
- 239000002585 base Substances 0.000 description 1
- 229940092782 bentonite Drugs 0.000 description 1
- 125000003785 benzimidazolyl group Chemical group N1=C(NC2=C1C=CC=C2)* 0.000 description 1
- 125000000499 benzofuranyl group Chemical group O1C(=CC2=C1C=CC=C2)* 0.000 description 1
- WPYMKLBDIGXBTP-UHFFFAOYSA-N benzoic acid Chemical compound OC(=O)C1=CC=CC=C1 WPYMKLBDIGXBTP-UHFFFAOYSA-N 0.000 description 1
- 125000001164 benzothiazolyl group Chemical group S1C(=NC2=C1C=CC=C2)* 0.000 description 1
- 125000004196 benzothienyl group Chemical group S1C(=CC2=C1C=CC=C2)* 0.000 description 1
- 125000003236 benzoyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)=O 0.000 description 1
- 125000000649 benzylidene group Chemical group [H]C(=[*])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- OQFSQFPPLPISGP-UHFFFAOYSA-N beta-carboxyaspartic acid Natural products OC(=O)C(N)C(C(O)=O)C(O)=O OQFSQFPPLPISGP-UHFFFAOYSA-N 0.000 description 1
- GUBGYTABKSRVRQ-QUYVBRFLSA-N beta-maltose Chemical compound OC[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O GUBGYTABKSRVRQ-QUYVBRFLSA-N 0.000 description 1
- 125000002618 bicyclic heterocycle group Chemical group 0.000 description 1
- GPRLTFBKWDERLU-UHFFFAOYSA-N bicyclo[2.2.2]octane Chemical compound C1CC2CCC1CC2 GPRLTFBKWDERLU-UHFFFAOYSA-N 0.000 description 1
- 238000004166 bioassay Methods 0.000 description 1
- 238000011325 biochemical measurement Methods 0.000 description 1
- 229920002988 biodegradable polymer Polymers 0.000 description 1
- 239000004621 biodegradable polymer Substances 0.000 description 1
- 238000012925 biological evaluation Methods 0.000 description 1
- 230000033228 biological regulation Effects 0.000 description 1
- 239000012472 biological sample Substances 0.000 description 1
- 229920001222 biopolymer Polymers 0.000 description 1
- 239000004305 biphenyl Substances 0.000 description 1
- 235000010290 biphenyl Nutrition 0.000 description 1
- 229920001400 block copolymer Polymers 0.000 description 1
- 230000000903 blocking effect Effects 0.000 description 1
- 230000008499 blood brain barrier function Effects 0.000 description 1
- 210000001218 blood-brain barrier Anatomy 0.000 description 1
- 210000000988 bone and bone Anatomy 0.000 description 1
- 230000010072 bone remodeling Effects 0.000 description 1
- KGBXLFKZBHKPEV-UHFFFAOYSA-N boric acid Chemical compound OB(O)O KGBXLFKZBHKPEV-UHFFFAOYSA-N 0.000 description 1
- 239000004327 boric acid Substances 0.000 description 1
- 235000010338 boric acid Nutrition 0.000 description 1
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Substances BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 description 1
- 229910052794 bromium Inorganic materials 0.000 description 1
- 239000000872 buffer Substances 0.000 description 1
- 208000000594 bullous pemphigoid Diseases 0.000 description 1
- 125000004369 butenyl group Chemical group C(=CCC)* 0.000 description 1
- FUFJGUQYACFECW-UHFFFAOYSA-L calcium hydrogenphosphate Chemical compound [Ca+2].OP([O-])([O-])=O FUFJGUQYACFECW-UHFFFAOYSA-L 0.000 description 1
- 239000001506 calcium phosphate Substances 0.000 description 1
- CJZGTCYPCWQAJB-UHFFFAOYSA-L calcium stearate Chemical compound [Ca+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O CJZGTCYPCWQAJB-UHFFFAOYSA-L 0.000 description 1
- 239000008116 calcium stearate Substances 0.000 description 1
- 235000013539 calcium stearate Nutrition 0.000 description 1
- 201000011510 cancer Diseases 0.000 description 1
- 208000035269 cancer or benign tumor Diseases 0.000 description 1
- 239000002775 capsule Substances 0.000 description 1
- 125000000609 carbazolyl group Chemical group C1(=CC=CC=2C3=CC=CC=C3NC12)* 0.000 description 1
- 150000001722 carbon compounds Chemical class 0.000 description 1
- 125000002057 carboxymethyl group Chemical group [H]OC(=O)C([H])([H])[*] 0.000 description 1
- 239000004203 carnauba wax Substances 0.000 description 1
- 235000013869 carnauba wax Nutrition 0.000 description 1
- 229940082483 carnauba wax Drugs 0.000 description 1
- 239000003054 catalyst Substances 0.000 description 1
- 229960000590 celecoxib Drugs 0.000 description 1
- RZEKVGVHFLEQIL-UHFFFAOYSA-N celecoxib Chemical compound C1=CC(C)=CC=C1C1=CC(C(F)(F)F)=NN1C1=CC=C(S(N)(=O)=O)C=C1 RZEKVGVHFLEQIL-UHFFFAOYSA-N 0.000 description 1
- 230000003915 cell function Effects 0.000 description 1
- 239000001913 cellulose Substances 0.000 description 1
- 229910052729 chemical element Inorganic materials 0.000 description 1
- 125000003636 chemical group Chemical group 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 230000035605 chemotaxis Effects 0.000 description 1
- 238000004296 chiral HPLC Methods 0.000 description 1
- 239000000460 chlorine Substances 0.000 description 1
- 229910052801 chlorine Inorganic materials 0.000 description 1
- 229960003677 chloroquine Drugs 0.000 description 1
- WHTVZRBIWZFKQO-UHFFFAOYSA-N chloroquine Natural products ClC1=CC=C2C(NC(C)CCCN(CC)CC)=CC=NC2=C1 WHTVZRBIWZFKQO-UHFFFAOYSA-N 0.000 description 1
- 125000003016 chromanyl group Chemical group O1C(CCC2=CC=CC=C12)* 0.000 description 1
- 230000006020 chronic inflammation Effects 0.000 description 1
- 208000025302 chronic primary adrenal insufficiency Diseases 0.000 description 1
- 125000000259 cinnolinyl group Chemical group N1=NC(=CC2=CC=CC=C12)* 0.000 description 1
- 239000002442 collagenase inhibitor Substances 0.000 description 1
- 239000003086 colorant Substances 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- 208000014439 complex regional pain syndrome type 2 Diseases 0.000 description 1
- 229940127113 compound 57 Drugs 0.000 description 1
- 238000005094 computer simulation Methods 0.000 description 1
- 238000009833 condensation Methods 0.000 description 1
- 230000005494 condensation Effects 0.000 description 1
- 235000009508 confectionery Nutrition 0.000 description 1
- 208000010247 contact dermatitis Diseases 0.000 description 1
- 239000000356 contaminant Substances 0.000 description 1
- 239000000599 controlled substance Substances 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 239000003246 corticosteroid Substances 0.000 description 1
- 229960001334 corticosteroids Drugs 0.000 description 1
- 239000006071 cream Substances 0.000 description 1
- 229960000913 crospovidone Drugs 0.000 description 1
- 235000010947 crosslinked sodium carboxy methyl cellulose Nutrition 0.000 description 1
- 239000013058 crude material Substances 0.000 description 1
- 238000002425 crystallisation Methods 0.000 description 1
- 230000008025 crystallization Effects 0.000 description 1
- 208000004921 cutaneous lupus erythematosus Diseases 0.000 description 1
- 125000000392 cycloalkenyl group Chemical group 0.000 description 1
- 125000001995 cyclobutyl group Chemical group [H]C1([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 229940097362 cyclodextrins Drugs 0.000 description 1
- 125000001162 cycloheptenyl group Chemical group C1(=CCCCCC1)* 0.000 description 1
- 125000000582 cycloheptyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 1
- 125000000596 cyclohexenyl group Chemical group C1(=CCCCC1)* 0.000 description 1
- 125000000522 cyclooctenyl group Chemical group C1(=CCCCCCC1)* 0.000 description 1
- 125000000640 cyclooctyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C([H])([H])C1([H])[H] 0.000 description 1
- 125000002433 cyclopentenyl group Chemical group C1(=CCCC1)* 0.000 description 1
- 125000001511 cyclopentyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 1
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 1
- 125000004856 decahydroquinolinyl group Chemical group N1(CCCC2CCCCC12)* 0.000 description 1
- 238000010908 decantation Methods 0.000 description 1
- 230000003247 decreasing effect Effects 0.000 description 1
- 230000002074 deregulated effect Effects 0.000 description 1
- 230000003831 deregulation Effects 0.000 description 1
- 238000009795 derivation Methods 0.000 description 1
- 238000001212 derivatisation Methods 0.000 description 1
- 201000001981 dermatomyositis Diseases 0.000 description 1
- 238000013461 design Methods 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 229910052805 deuterium Inorganic materials 0.000 description 1
- 229960003957 dexamethasone Drugs 0.000 description 1
- UREBDLICKHMUKA-CXSFZGCWSA-N dexamethasone Chemical compound C1CC2=CC(=O)C=C[C@]2(C)[C@]2(F)[C@@H]1[C@@H]1C[C@@H](C)[C@@](C(=O)CO)(O)[C@@]1(C)C[C@@H]2O UREBDLICKHMUKA-CXSFZGCWSA-N 0.000 description 1
- 229940096516 dextrates Drugs 0.000 description 1
- 235000019425 dextrin Nutrition 0.000 description 1
- 239000008121 dextrose Substances 0.000 description 1
- 125000002576 diazepinyl group Chemical group N1N=C(C=CC=C1)* 0.000 description 1
- NEFBYIFKOOEVPA-UHFFFAOYSA-K dicalcium phosphate Chemical compound [Ca+2].[Ca+2].[O-]P([O-])([O-])=O NEFBYIFKOOEVPA-UHFFFAOYSA-K 0.000 description 1
- 229940038472 dicalcium phosphate Drugs 0.000 description 1
- 229910000390 dicalcium phosphate Inorganic materials 0.000 description 1
- ZFTFAPZRGNKQPU-UHFFFAOYSA-N dicarbonic acid Chemical compound OC(=O)OC(O)=O ZFTFAPZRGNKQPU-UHFFFAOYSA-N 0.000 description 1
- 235000005911 diet Nutrition 0.000 description 1
- 230000037213 diet Effects 0.000 description 1
- HBGGXOJOCNVPFY-UHFFFAOYSA-N diisononyl phthalate Chemical compound CC(C)CCCCCCOC(=O)C1=CC=CC=C1C(=O)OCCCCCCC(C)C HBGGXOJOCNVPFY-UHFFFAOYSA-N 0.000 description 1
- 239000003085 diluting agent Substances 0.000 description 1
- GXGAKHNRMVGRPK-UHFFFAOYSA-N dimagnesium;dioxido-bis[[oxido(oxo)silyl]oxy]silane Chemical compound [Mg+2].[Mg+2].[O-][Si](=O)O[Si]([O-])([O-])O[Si]([O-])=O GXGAKHNRMVGRPK-UHFFFAOYSA-N 0.000 description 1
- 230000003292 diminished effect Effects 0.000 description 1
- 125000000532 dioxanyl group Chemical group 0.000 description 1
- 125000005879 dioxolanyl group Chemical group 0.000 description 1
- MGHPNCMVUAKAIE-UHFFFAOYSA-N diphenylmethanamine Chemical compound C=1C=CC=CC=1C(N)C1=CC=CC=C1 MGHPNCMVUAKAIE-UHFFFAOYSA-N 0.000 description 1
- 238000007598 dipping method Methods 0.000 description 1
- VXIHRIQNJCRFQX-UHFFFAOYSA-K disodium aurothiomalate Chemical compound [Na+].[Na+].[O-]C(=O)CC(S[Au])C([O-])=O VXIHRIQNJCRFQX-UHFFFAOYSA-K 0.000 description 1
- 235000019301 disodium ethylene diamine tetraacetate Nutrition 0.000 description 1
- 235000019800 disodium phosphate Nutrition 0.000 description 1
- 239000002270 dispersing agent Substances 0.000 description 1
- PMMYEEVYMWASQN-UHFFFAOYSA-N dl-hydroxyproline Natural products OC1C[NH2+]C(C([O-])=O)C1 PMMYEEVYMWASQN-UHFFFAOYSA-N 0.000 description 1
- 125000003438 dodecyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 231100000673 dose–response relationship Toxicity 0.000 description 1
- 238000012377 drug delivery Methods 0.000 description 1
- 238000009510 drug design Methods 0.000 description 1
- 229940126534 drug product Drugs 0.000 description 1
- 230000009977 dual effect Effects 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 239000003974 emollient agent Substances 0.000 description 1
- 238000005538 encapsulation Methods 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 239000003623 enhancer Substances 0.000 description 1
- 210000002919 epithelial cell Anatomy 0.000 description 1
- 238000006735 epoxidation reaction Methods 0.000 description 1
- HCZKYJDFEPMADG-UHFFFAOYSA-N erythro-nordihydroguaiaretic acid Natural products C=1C=C(O)C(O)=CC=1CC(C)C(C)CC1=CC=C(O)C(O)=C1 HCZKYJDFEPMADG-UHFFFAOYSA-N 0.000 description 1
- 229960000403 etanercept Drugs 0.000 description 1
- GWNFQAKCJYEJEW-UHFFFAOYSA-N ethyl 3-[8-[[4-methyl-5-[(3-methyl-4-oxophthalazin-1-yl)methyl]-1,2,4-triazol-3-yl]sulfanyl]octanoylamino]benzoate Chemical compound CCOC(=O)C1=CC(NC(=O)CCCCCCCSC2=NN=C(CC3=NN(C)C(=O)C4=CC=CC=C34)N2C)=CC=C1 GWNFQAKCJYEJEW-UHFFFAOYSA-N 0.000 description 1
- 235000019325 ethyl cellulose Nutrition 0.000 description 1
- 229920001249 ethyl cellulose Polymers 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- 125000002534 ethynyl group Chemical group [H]C#C* 0.000 description 1
- 208000004526 exfoliative dermatitis Diseases 0.000 description 1
- 239000000284 extract Substances 0.000 description 1
- 239000000796 flavoring agent Substances 0.000 description 1
- 235000013312 flour Nutrition 0.000 description 1
- 229910052731 fluorine Inorganic materials 0.000 description 1
- 239000011737 fluorine Substances 0.000 description 1
- 125000001153 fluoro group Chemical group F* 0.000 description 1
- 231100000854 focal segmental glomerulosclerosis Toxicity 0.000 description 1
- 235000013355 food flavoring agent Nutrition 0.000 description 1
- 125000002485 formyl group Chemical group [H]C(*)=O 0.000 description 1
- 238000001640 fractional crystallisation Methods 0.000 description 1
- 125000002541 furyl group Chemical group 0.000 description 1
- 229960003692 gamma aminobutyric acid Drugs 0.000 description 1
- 210000001035 gastrointestinal tract Anatomy 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 206010061989 glomerulosclerosis Diseases 0.000 description 1
- 235000001727 glucose Nutrition 0.000 description 1
- 229930195712 glutamate Natural products 0.000 description 1
- 235000013922 glutamic acid Nutrition 0.000 description 1
- 239000004220 glutamic acid Substances 0.000 description 1
- ZDXPYRJPNDTMRX-UHFFFAOYSA-N glutamine Natural products OC(=O)C(N)CCC(N)=O ZDXPYRJPNDTMRX-UHFFFAOYSA-N 0.000 description 1
- 235000004554 glutamine Nutrition 0.000 description 1
- YQEMORVAKMFKLG-UHFFFAOYSA-N glycerine monostearate Natural products CCCCCCCCCCCCCCCCCC(=O)OC(CO)CO YQEMORVAKMFKLG-UHFFFAOYSA-N 0.000 description 1
- SVUQHVRAGMNPLW-UHFFFAOYSA-N glycerol monostearate Natural products CCCCCCCCCCCCCCCCC(=O)OCC(O)CO SVUQHVRAGMNPLW-UHFFFAOYSA-N 0.000 description 1
- 125000003976 glyceryl group Chemical group [H]C([*])([H])C(O[H])([H])C(O[H])([H])[H] 0.000 description 1
- 229940075507 glyceryl monostearate Drugs 0.000 description 1
- FETSQPAGYOVAQU-UHFFFAOYSA-N glyceryl palmitostearate Chemical compound OCC(O)CO.CCCCCCCCCCCCCCCC(O)=O.CCCCCCCCCCCCCCCCCC(O)=O FETSQPAGYOVAQU-UHFFFAOYSA-N 0.000 description 1
- 229940046813 glyceryl palmitostearate Drugs 0.000 description 1
- 239000003102 growth factor Substances 0.000 description 1
- 208000019622 heart disease Diseases 0.000 description 1
- 125000004415 heterocyclylalkyl group Chemical group 0.000 description 1
- 125000003104 hexanoyl group Chemical group O=C([*])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- HNDVDQJCIGZPNO-UHFFFAOYSA-N histidine Natural products OC(=O)C(N)CC1=CN=CN1 HNDVDQJCIGZPNO-UHFFFAOYSA-N 0.000 description 1
- 230000013632 homeostatic process Effects 0.000 description 1
- 229930195733 hydrocarbon Natural products 0.000 description 1
- 150000002430 hydrocarbons Chemical group 0.000 description 1
- 239000000017 hydrogel Substances 0.000 description 1
- 239000008172 hydrogenated vegetable oil Substances 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-M hydrogensulfate Chemical compound OS([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-M 0.000 description 1
- 230000002209 hydrophobic effect Effects 0.000 description 1
- WGCNASOHLSPBMP-UHFFFAOYSA-N hydroxyacetaldehyde Natural products OCC=O WGCNASOHLSPBMP-UHFFFAOYSA-N 0.000 description 1
- 235000019447 hydroxyethyl cellulose Nutrition 0.000 description 1
- 229940071826 hydroxyethyl cellulose Drugs 0.000 description 1
- 125000004029 hydroxymethyl group Chemical group [H]OC([H])([H])* 0.000 description 1
- 229960002591 hydroxyproline Drugs 0.000 description 1
- 230000009610 hypersensitivity Effects 0.000 description 1
- 125000002883 imidazolyl group Chemical group 0.000 description 1
- 125000001841 imino group Chemical group [H]N=* 0.000 description 1
- 230000028993 immune response Effects 0.000 description 1
- 238000010874 in vitro model Methods 0.000 description 1
- 238000011065 in-situ storage Methods 0.000 description 1
- 125000003392 indanyl group Chemical group C1(CCC2=CC=CC=C12)* 0.000 description 1
- 125000003453 indazolyl group Chemical group N1N=C(C2=C1C=CC=C2)* 0.000 description 1
- 125000003387 indolinyl group Chemical group N1(CCC2=CC=CC=C12)* 0.000 description 1
- 125000003406 indolizinyl group Chemical group C=1(C=CN2C=CC=CC12)* 0.000 description 1
- 125000001041 indolyl group Chemical group 0.000 description 1
- 230000001939 inductive effect Effects 0.000 description 1
- 230000028709 inflammatory response Effects 0.000 description 1
- 229960000598 infliximab Drugs 0.000 description 1
- 238000002347 injection Methods 0.000 description 1
- 239000007924 injection Substances 0.000 description 1
- 230000003914 insulin secretion Effects 0.000 description 1
- 102000002467 interleukin receptors Human genes 0.000 description 1
- 108010093036 interleukin receptors Proteins 0.000 description 1
- 229940047122 interleukins Drugs 0.000 description 1
- 208000036971 interstitial lung disease 2 Diseases 0.000 description 1
- 230000004068 intracellular signaling Effects 0.000 description 1
- 238000010255 intramuscular injection Methods 0.000 description 1
- 239000007927 intramuscular injection Substances 0.000 description 1
- 238000007913 intrathecal administration Methods 0.000 description 1
- 238000010253 intravenous injection Methods 0.000 description 1
- 238000007914 intraventricular administration Methods 0.000 description 1
- 201000010659 intrinsic asthma Diseases 0.000 description 1
- 229910052740 iodine Inorganic materials 0.000 description 1
- 239000011630 iodine Substances 0.000 description 1
- 125000002346 iodo group Chemical group I* 0.000 description 1
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 1
- 125000000904 isoindolyl group Chemical group C=1(NC=C2C=CC=CC12)* 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 229960000310 isoleucine Drugs 0.000 description 1
- AGPKZVBTJJNPAG-UHFFFAOYSA-N isoleucine Natural products CCC(C)C(N)C(O)=O AGPKZVBTJJNPAG-UHFFFAOYSA-N 0.000 description 1
- 125000001972 isopentyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 125000005956 isoquinolyl group Chemical group 0.000 description 1
- 125000001786 isothiazolyl group Chemical group 0.000 description 1
- 125000000842 isoxazolyl group Chemical group 0.000 description 1
- 210000001503 joint Anatomy 0.000 description 1
- 238000000021 kinase assay Methods 0.000 description 1
- 229940043355 kinase inhibitor Drugs 0.000 description 1
- 238000010930 lactamization Methods 0.000 description 1
- 239000004310 lactic acid Substances 0.000 description 1
- 239000008101 lactose Substances 0.000 description 1
- 150000002611 lead compounds Chemical class 0.000 description 1
- VHOGYURTWQBHIL-UHFFFAOYSA-N leflunomide Chemical compound O1N=CC(C(=O)NC=2C=CC(=CC=2)C(F)(F)F)=C1C VHOGYURTWQBHIL-UHFFFAOYSA-N 0.000 description 1
- 229960000681 leflunomide Drugs 0.000 description 1
- 201000011486 lichen planus Diseases 0.000 description 1
- 150000002632 lipids Chemical class 0.000 description 1
- 229910052744 lithium Inorganic materials 0.000 description 1
- 210000004698 lymphocyte Anatomy 0.000 description 1
- 210000003563 lymphoid tissue Anatomy 0.000 description 1
- 239000006166 lysate Substances 0.000 description 1
- 235000018977 lysine Nutrition 0.000 description 1
- 201000010230 macular retinal edema Diseases 0.000 description 1
- 239000011777 magnesium Chemical class 0.000 description 1
- 229910052749 magnesium Inorganic materials 0.000 description 1
- 229940037627 magnesium lauryl sulfate Drugs 0.000 description 1
- 239000000395 magnesium oxide Substances 0.000 description 1
- CPLXHLVBOLITMK-UHFFFAOYSA-N magnesium oxide Inorganic materials [Mg]=O CPLXHLVBOLITMK-UHFFFAOYSA-N 0.000 description 1
- 235000012245 magnesium oxide Nutrition 0.000 description 1
- 239000000391 magnesium silicate Substances 0.000 description 1
- 235000019359 magnesium stearate Nutrition 0.000 description 1
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 1
- 229910000386 magnesium trisilicate Inorganic materials 0.000 description 1
- 235000019793 magnesium trisilicate Nutrition 0.000 description 1
- 229940099273 magnesium trisilicate Drugs 0.000 description 1
- HBNDBUATLJAUQM-UHFFFAOYSA-L magnesium;dodecyl sulfate Chemical compound [Mg+2].CCCCCCCCCCCCOS([O-])(=O)=O.CCCCCCCCCCCCOS([O-])(=O)=O HBNDBUATLJAUQM-UHFFFAOYSA-L 0.000 description 1
- AXZKOIWUVFPNLO-UHFFFAOYSA-N magnesium;oxygen(2-) Chemical compound [O-2].[Mg+2] AXZKOIWUVFPNLO-UHFFFAOYSA-N 0.000 description 1
- VZCYOOQTPOCHFL-UPHRSURJSA-N maleic acid Chemical compound OC(=O)\C=C/C(O)=O VZCYOOQTPOCHFL-UPHRSURJSA-N 0.000 description 1
- 230000007257 malfunction Effects 0.000 description 1
- 229940035034 maltodextrin Drugs 0.000 description 1
- 210000004962 mammalian cell Anatomy 0.000 description 1
- 229960003951 masoprocol Drugs 0.000 description 1
- 238000004949 mass spectrometry Methods 0.000 description 1
- 238000005259 measurement Methods 0.000 description 1
- 230000010534 mechanism of action Effects 0.000 description 1
- 230000001404 mediated effect Effects 0.000 description 1
- 238000002483 medication Methods 0.000 description 1
- 239000002609 medium Substances 0.000 description 1
- 230000008018 melting Effects 0.000 description 1
- 238000002844 melting Methods 0.000 description 1
- 229930182817 methionine Natural products 0.000 description 1
- 229960000485 methotrexate Drugs 0.000 description 1
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 1
- VSDUZFOSJDMAFZ-SECBINFHSA-N methyl (2r)-2-amino-3-phenylpropanoate Chemical compound COC(=O)[C@H](N)CC1=CC=CC=C1 VSDUZFOSJDMAFZ-SECBINFHSA-N 0.000 description 1
- IYJWIOMLXXHZPO-UHFFFAOYSA-N methyl 2-(ethenylamino)acetate Chemical compound COC(=O)CNC=C IYJWIOMLXXHZPO-UHFFFAOYSA-N 0.000 description 1
- JBLCIDJBOKTOBF-UHFFFAOYSA-N methyl 2-[9h-fluoren-9-ylmethoxycarbonyl(oxiran-2-yl)amino]acetate Chemical compound C12=CC=CC=C2C2=CC=CC=C2C1COC(=O)N(CC(=O)OC)C1CO1 JBLCIDJBOKTOBF-UHFFFAOYSA-N 0.000 description 1
- MWZPENIJLUWBSY-VIFPVBQESA-N methyl L-tyrosinate Chemical compound COC(=O)[C@@H](N)CC1=CC=C(O)C=C1 MWZPENIJLUWBSY-VIFPVBQESA-N 0.000 description 1
- 229920000609 methyl cellulose Polymers 0.000 description 1
- YLGXILFCIXHCMC-JHGZEJCSSA-N methyl cellulose Chemical compound COC1C(OC)C(OC)C(COC)O[C@H]1O[C@H]1C(OC)C(OC)C(OC)OC1COC YLGXILFCIXHCMC-JHGZEJCSSA-N 0.000 description 1
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 1
- 239000001923 methylcellulose Substances 0.000 description 1
- 229960002900 methylcellulose Drugs 0.000 description 1
- 235000010981 methylcellulose Nutrition 0.000 description 1
- 239000003094 microcapsule Substances 0.000 description 1
- 239000011859 microparticle Substances 0.000 description 1
- 206010027599 migraine Diseases 0.000 description 1
- 150000007522 mineralic acids Chemical class 0.000 description 1
- 238000010369 molecular cloning Methods 0.000 description 1
- 239000001788 mono and diglycerides of fatty acids Substances 0.000 description 1
- 210000001616 monocyte Anatomy 0.000 description 1
- 229910000402 monopotassium phosphate Inorganic materials 0.000 description 1
- 125000002757 morpholinyl group Chemical group 0.000 description 1
- 231100000219 mutagenic Toxicity 0.000 description 1
- 230000003505 mutagenic effect Effects 0.000 description 1
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- GOQYKNQRPGWPLP-UHFFFAOYSA-N n-heptadecyl alcohol Natural products CCCCCCCCCCCCCCCCCO GOQYKNQRPGWPLP-UHFFFAOYSA-N 0.000 description 1
- 125000003136 n-heptyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001280 n-hexyl group Chemical group C(CCCCC)* 0.000 description 1
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001624 naphthyl group Chemical group 0.000 description 1
- 125000004593 naphthyridinyl group Chemical group N1=C(C=CC2=CC=CN=C12)* 0.000 description 1
- 239000013642 negative control Substances 0.000 description 1
- 125000001971 neopentyl group Chemical group [H]C([*])([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 150000002829 nitrogen Chemical class 0.000 description 1
- 208000037916 non-allergic rhinitis Diseases 0.000 description 1
- 230000000269 nucleophilic effect Effects 0.000 description 1
- 125000005060 octahydroindolyl group Chemical group N1(CCC2CCCCC12)* 0.000 description 1
- 125000002801 octanoyl group Chemical group C(CCCCCCC)(=O)* 0.000 description 1
- 229940049964 oleate Drugs 0.000 description 1
- ZQPPMHVWECSIRJ-KTKRTIGZSA-N oleic acid Chemical compound CCCCCCCC\C=C/CCCCCCCC(O)=O ZQPPMHVWECSIRJ-KTKRTIGZSA-N 0.000 description 1
- 238000006384 oligomerization reaction Methods 0.000 description 1
- 238000001543 one-way ANOVA Methods 0.000 description 1
- 230000003287 optical effect Effects 0.000 description 1
- 210000000056 organ Anatomy 0.000 description 1
- 150000007524 organic acids Chemical class 0.000 description 1
- 239000012074 organic phase Substances 0.000 description 1
- 229960003104 ornithine Drugs 0.000 description 1
- 230000011164 ossification Effects 0.000 description 1
- 210000002997 osteoclast Anatomy 0.000 description 1
- 238000012261 overproduction Methods 0.000 description 1
- 125000001715 oxadiazolyl group Chemical group 0.000 description 1
- 229940039748 oxalate Drugs 0.000 description 1
- 125000000160 oxazolidinyl group Chemical group 0.000 description 1
- 125000002971 oxazolyl group Chemical group 0.000 description 1
- 150000002924 oxiranes Chemical class 0.000 description 1
- 230000026792 palmitoylation Effects 0.000 description 1
- 239000000199 parathyroid hormone Substances 0.000 description 1
- 229960001319 parathyroid hormone Drugs 0.000 description 1
- 230000008506 pathogenesis Effects 0.000 description 1
- 239000000312 peanut oil Substances 0.000 description 1
- 230000006320 pegylation Effects 0.000 description 1
- 201000001976 pemphigus vulgaris Diseases 0.000 description 1
- 239000000813 peptide hormone Substances 0.000 description 1
- 108010011903 peptide receptors Proteins 0.000 description 1
- 102000014187 peptide receptors Human genes 0.000 description 1
- 125000001151 peptidyl group Chemical group 0.000 description 1
- 230000000737 periodic effect Effects 0.000 description 1
- 201000001245 periodontitis Diseases 0.000 description 1
- 210000001428 peripheral nervous system Anatomy 0.000 description 1
- 239000008177 pharmaceutical agent Substances 0.000 description 1
- 229940124531 pharmaceutical excipient Drugs 0.000 description 1
- 125000004934 phenanthridinyl group Chemical group C1(=CC=CC2=NC=C3C=CC=CC3=C12)* 0.000 description 1
- 125000001791 phenazinyl group Chemical group C1(=CC=CC2=NC3=CC=CC=C3N=C12)* 0.000 description 1
- 125000001484 phenothiazinyl group Chemical group C1(=CC=CC=2SC3=CC=CC=C3NC12)* 0.000 description 1
- 125000001644 phenoxazinyl group Chemical group C1(=CC=CC=2OC3=CC=CC=C3NC12)* 0.000 description 1
- COLNVLDHVKWLRT-UHFFFAOYSA-N phenylalanine Natural products OC(=O)C(N)CC1=CC=CC=C1 COLNVLDHVKWLRT-UHFFFAOYSA-N 0.000 description 1
- UYWQUFXKFGHYNT-UHFFFAOYSA-N phenylmethyl ester of formic acid Natural products O=COCC1=CC=CC=C1 UYWQUFXKFGHYNT-UHFFFAOYSA-N 0.000 description 1
- 239000010452 phosphate Substances 0.000 description 1
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 1
- UEZVMMHDMIWARA-UHFFFAOYSA-M phosphonate Chemical compound [O-]P(=O)=O UEZVMMHDMIWARA-UHFFFAOYSA-M 0.000 description 1
- BZQFBWGGLXLEPQ-REOHCLBHSA-N phosphoserine Chemical compound OC(=O)[C@@H](N)COP(O)(O)=O BZQFBWGGLXLEPQ-REOHCLBHSA-N 0.000 description 1
- 239000003757 phosphotransferase inhibitor Substances 0.000 description 1
- 125000004592 phthalazinyl group Chemical group C1(=NN=CC2=CC=CC=C12)* 0.000 description 1
- 125000005545 phthalimidyl group Chemical group 0.000 description 1
- 230000004962 physiological condition Effects 0.000 description 1
- 230000001766 physiological effect Effects 0.000 description 1
- 230000035479 physiological effects, processes and functions Effects 0.000 description 1
- 125000004193 piperazinyl group Chemical group 0.000 description 1
- 125000003386 piperidinyl group Chemical group 0.000 description 1
- 229960000540 polacrilin potassium Drugs 0.000 description 1
- 229920001983 poloxamer Polymers 0.000 description 1
- 229960000502 poloxamer Drugs 0.000 description 1
- 229920000747 poly(lactic acid) Polymers 0.000 description 1
- 125000003367 polycyclic group Chemical group 0.000 description 1
- 239000004626 polylactic acid Substances 0.000 description 1
- 229920000642 polymer Polymers 0.000 description 1
- 229920000193 polymethacrylate Polymers 0.000 description 1
- 108091033319 polynucleotide Proteins 0.000 description 1
- 102000040430 polynucleotide Human genes 0.000 description 1
- 239000002157 polynucleotide Substances 0.000 description 1
- 235000013809 polyvinylpolypyrrolidone Nutrition 0.000 description 1
- 229920000523 polyvinylpolypyrrolidone Polymers 0.000 description 1
- 239000013641 positive control Substances 0.000 description 1
- 230000004481 post-translational protein modification Effects 0.000 description 1
- 239000011591 potassium Chemical class 0.000 description 1
- 229910052700 potassium Inorganic materials 0.000 description 1
- GNSKLFRGEWLPPA-UHFFFAOYSA-M potassium dihydrogen phosphate Chemical compound [K+].OP(O)([O-])=O GNSKLFRGEWLPPA-UHFFFAOYSA-M 0.000 description 1
- WVWZXTJUCNEUAE-UHFFFAOYSA-M potassium;1,2-bis(ethenyl)benzene;2-methylprop-2-enoate Chemical compound [K+].CC(=C)C([O-])=O.C=CC1=CC=CC=C1C=C WVWZXTJUCNEUAE-UHFFFAOYSA-M 0.000 description 1
- 229920003124 powdered cellulose Polymers 0.000 description 1
- 235000019814 powdered cellulose Nutrition 0.000 description 1
- 201000011461 pre-eclampsia Diseases 0.000 description 1
- 238000011533 pre-incubation Methods 0.000 description 1
- 230000013823 prenylation Effects 0.000 description 1
- 238000004237 preparative chromatography Methods 0.000 description 1
- 239000003755 preservative agent Substances 0.000 description 1
- 230000002265 prevention Effects 0.000 description 1
- 201000009395 primary hyperaldosteronism Diseases 0.000 description 1
- FYPMFJGVHOHGLL-UHFFFAOYSA-N probucol Chemical compound C=1C(C(C)(C)C)=C(O)C(C(C)(C)C)=CC=1SC(C)(C)SC1=CC(C(C)(C)C)=C(O)C(C(C)(C)C)=C1 FYPMFJGVHOHGLL-UHFFFAOYSA-N 0.000 description 1
- 229960003912 probucol Drugs 0.000 description 1
- 230000000770 proinflammatory effect Effects 0.000 description 1
- 235000010409 propane-1,2-diol alginate Nutrition 0.000 description 1
- 239000000770 propane-1,2-diol alginate Substances 0.000 description 1
- 125000004368 propenyl group Chemical group C(=CC)* 0.000 description 1
- 230000000069 prophylactic effect Effects 0.000 description 1
- 235000013772 propylene glycol Nutrition 0.000 description 1
- 108010000947 protamine zinc Chemical class 0.000 description 1
- 230000009822 protein phosphorylation Effects 0.000 description 1
- 125000001042 pteridinyl group Chemical group N1=C(N=CC2=NC=CN=C12)* 0.000 description 1
- 208000005333 pulmonary edema Diseases 0.000 description 1
- 230000002685 pulmonary effect Effects 0.000 description 1
- 208000005069 pulmonary fibrosis Diseases 0.000 description 1
- 125000000561 purinyl group Chemical group N1=C(N=C2N=CNC2=C1)* 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- 125000002098 pyridazinyl group Chemical group 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 229940043131 pyroglutamate Drugs 0.000 description 1
- 125000004929 pyrrolidonyl group Chemical group N1(C(CCC1)=O)* 0.000 description 1
- 125000001422 pyrrolinyl group Chemical group 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 description 1
- 125000005493 quinolyl group Chemical group 0.000 description 1
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 description 1
- 125000004621 quinuclidinyl group Chemical group N12C(CC(CC1)CC2)* 0.000 description 1
- 239000000376 reactant Substances 0.000 description 1
- 230000009257 reactivity Effects 0.000 description 1
- 229940044551 receptor antagonist Drugs 0.000 description 1
- 239000002464 receptor antagonist Substances 0.000 description 1
- 238000003259 recombinant expression Methods 0.000 description 1
- 238000010188 recombinant method Methods 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 230000007115 recruitment Effects 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000002829 reductive effect Effects 0.000 description 1
- 230000008929 regeneration Effects 0.000 description 1
- 238000011069 regeneration method Methods 0.000 description 1
- 238000007634 remodeling Methods 0.000 description 1
- 239000012508 resin bead Substances 0.000 description 1
- 210000002345 respiratory system Anatomy 0.000 description 1
- 235000009566 rice Nutrition 0.000 description 1
- 229960000371 rofecoxib Drugs 0.000 description 1
- RZJQGNCSTQAWON-UHFFFAOYSA-N rofecoxib Chemical compound C1=CC(S(=O)(=O)C)=CC=C1C1=C(C=2C=CC=CC=2)C(=O)OC1 RZJQGNCSTQAWON-UHFFFAOYSA-N 0.000 description 1
- 229940043230 sarcosine Drugs 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 125000003548 sec-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 230000028327 secretion Effects 0.000 description 1
- 230000008313 sensitization Effects 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 239000008159 sesame oil Substances 0.000 description 1
- 235000011803 sesame oil Nutrition 0.000 description 1
- 230000019491 signal transduction Effects 0.000 description 1
- 235000012239 silicon dioxide Nutrition 0.000 description 1
- 210000000329 smooth muscle myocyte Anatomy 0.000 description 1
- 229960001315 sodium aurothiomalate Drugs 0.000 description 1
- 229910000029 sodium carbonate Inorganic materials 0.000 description 1
- 235000019333 sodium laurylsulphate Nutrition 0.000 description 1
- RYYKJJJTJZKILX-UHFFFAOYSA-M sodium octadecanoate Chemical compound [Na+].CCCCCCCCCCCCCCCCCC([O-])=O RYYKJJJTJZKILX-UHFFFAOYSA-M 0.000 description 1
- 239000001488 sodium phosphate Substances 0.000 description 1
- 229920003109 sodium starch glycolate Polymers 0.000 description 1
- 239000008109 sodium starch glycolate Substances 0.000 description 1
- 229940079832 sodium starch glycolate Drugs 0.000 description 1
- OKODKVMXHLUQSW-JITBQSAISA-M sodium;(e)-4-hydroxy-4-oxobut-2-enoate;octadecanoic acid Chemical compound [Na+].OC(=O)\C=C\C([O-])=O.CCCCCCCCCCCCCCCCCC(O)=O OKODKVMXHLUQSW-JITBQSAISA-M 0.000 description 1
- 239000000600 sorbitol Substances 0.000 description 1
- 239000003549 soybean oil Substances 0.000 description 1
- 235000012424 soybean oil Nutrition 0.000 description 1
- 125000006850 spacer group Chemical group 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 238000004611 spectroscopical analysis Methods 0.000 description 1
- 230000003393 splenic effect Effects 0.000 description 1
- 230000006641 stabilisation Effects 0.000 description 1
- 238000011105 stabilization Methods 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- DFVFTMTWCUHJBL-BQBZGAKWSA-N statine Chemical compound CC(C)C[C@H](N)[C@@H](O)CC(O)=O DFVFTMTWCUHJBL-BQBZGAKWSA-N 0.000 description 1
- 229940114926 stearate Drugs 0.000 description 1
- 230000000638 stimulation Effects 0.000 description 1
- 208000023516 stroke disease Diseases 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 1
- 239000000829 suppository Substances 0.000 description 1
- 239000004094 surface-active agent Substances 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 238000013268 sustained release Methods 0.000 description 1
- 239000012730 sustained-release form Substances 0.000 description 1
- 210000005222 synovial tissue Anatomy 0.000 description 1
- 239000003826 tablet Substances 0.000 description 1
- 108060008037 tachykinin Proteins 0.000 description 1
- 239000000454 talc Substances 0.000 description 1
- 229910052623 talc Inorganic materials 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- 229940095064 tartrate Drugs 0.000 description 1
- 201000004415 tendinitis Diseases 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- RWRDLPDLKQPQOW-UHFFFAOYSA-N tetrahydropyrrole Substances C1CCNC1 RWRDLPDLKQPQOW-UHFFFAOYSA-N 0.000 description 1
- 125000005958 tetrahydrothienyl group Chemical group 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- 125000001113 thiadiazolyl group Chemical group 0.000 description 1
- 125000005308 thiazepinyl group Chemical group S1N=C(C=CC=C1)* 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 239000002562 thickening agent Substances 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- 230000007838 tissue remodeling Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 231100000027 toxicology Toxicity 0.000 description 1
- 235000010487 tragacanth Nutrition 0.000 description 1
- 239000000196 tragacanth Substances 0.000 description 1
- 229940116362 tragacanth Drugs 0.000 description 1
- FGMPLJWBKKVCDB-UHFFFAOYSA-N trans-L-hydroxy-proline Natural products ON1CCCC1C(O)=O FGMPLJWBKKVCDB-UHFFFAOYSA-N 0.000 description 1
- 230000002103 transcriptional effect Effects 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 238000000844 transformation Methods 0.000 description 1
- 230000008733 trauma Effects 0.000 description 1
- 150000003626 triacylglycerols Chemical class 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- 125000004044 trifluoroacetyl group Chemical group FC(C(=O)*)(F)F 0.000 description 1
- SIOVKLKJSOKLIF-HJWRWDBZSA-N trimethylsilyl (1z)-n-trimethylsilylethanimidate Chemical compound C[Si](C)(C)OC(/C)=N\[Si](C)(C)C SIOVKLKJSOKLIF-HJWRWDBZSA-N 0.000 description 1
- 229910052722 tritium Inorganic materials 0.000 description 1
- GPRLSGONYQIRFK-MNYXATJNSA-N triton Chemical compound [3H+] GPRLSGONYQIRFK-MNYXATJNSA-N 0.000 description 1
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 201000008827 tuberculosis Diseases 0.000 description 1
- 230000004614 tumor growth Effects 0.000 description 1
- 102000003298 tumor necrosis factor receptor Human genes 0.000 description 1
- 238000007492 two-way ANOVA Methods 0.000 description 1
- 235000002374 tyrosine Nutrition 0.000 description 1
- OUYCCCASQSFEME-UHFFFAOYSA-N tyrosine Natural products OC(=O)C(N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-UHFFFAOYSA-N 0.000 description 1
- 238000010798 ubiquitination Methods 0.000 description 1
- 230000034512 ubiquitination Effects 0.000 description 1
- 238000011144 upstream manufacturing Methods 0.000 description 1
- 229960002004 valdecoxib Drugs 0.000 description 1
- 229940070710 valerate Drugs 0.000 description 1
- NQPDZGIKBAWPEJ-UHFFFAOYSA-N valeric acid Chemical compound CCCCC(O)=O NQPDZGIKBAWPEJ-UHFFFAOYSA-N 0.000 description 1
- 239000004474 valine Substances 0.000 description 1
- 235000015112 vegetable and seed oil Nutrition 0.000 description 1
- 239000008158 vegetable oil Substances 0.000 description 1
- 239000003981 vehicle Substances 0.000 description 1
- PXXNTAGJWPJAGM-UHFFFAOYSA-N vertaline Natural products C1C2C=3C=C(OC)C(OC)=CC=3OC(C=C3)=CC=C3CCC(=O)OC1CC1N2CCCC1 PXXNTAGJWPJAGM-UHFFFAOYSA-N 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 230000000007 visual effect Effects 0.000 description 1
- 239000000080 wetting agent Substances 0.000 description 1
- 235000010493 xanthan gum Nutrition 0.000 description 1
- 239000000230 xanthan gum Substances 0.000 description 1
- 229920001285 xanthan gum Polymers 0.000 description 1
- 229940082509 xanthan gum Drugs 0.000 description 1
- 239000005019 zein Substances 0.000 description 1
- 229940093612 zein Drugs 0.000 description 1
- 150000003751 zinc Chemical class 0.000 description 1
- XOOUIPVCVHRTMJ-UHFFFAOYSA-L zinc stearate Chemical compound [Zn+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O XOOUIPVCVHRTMJ-UHFFFAOYSA-L 0.000 description 1
- 150000003952 β-lactams Chemical class 0.000 description 1
- 150000003954 δ-lactams Chemical class 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
- C07K14/715—Receptors; Cell surface antigens; Cell surface determinants for cytokines; for lymphokines; for interferons
- C07K14/7155—Receptors; Cell surface antigens; Cell surface determinants for cytokines; for lymphokines; for interferons for interleukins [IL]
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Definitions
- the Interleukin-1 (IL-I) family of polypeptide hormones represents an important class of cytokines which are expressed by a variety of cell types including monocytes (which are the predominant source of IL-I), fibroblasts, endothelial cells, smooth muscle cells, osteoclasts, astrocytes, epithelial cells, T-cells, B-cells and numerous cancer cells.
- This family of cytokines includes more than 7 distinct but structurally related molecules including IL- l ⁇ and IL- l ⁇ .
- Receptors for IL-I recognize both ⁇ and ⁇ forms and both forms have similar biological properties.
- the biological properties of IL-I are numerous and include mediating many immunological and inflammatory responses to infection and injury.
- IRI (Sims, et al. 1989), which generates the biological effects of IL-I; and IL-IRII.
- IL-IRAcP receptor accessory protein
- the IL-lR/IL-lRacP complex can also recruit and activate kinases like PBK and Akt and can also lead to the activation of the PLC/PKC pathway of signalization (Daun and Fenton, 2000).
- IL-I Despite its normally beneficial effects on an organism response to infection and injury, actions of IL-I can be harmful in some instances. For example, inappropriate production or response to IL-I have been shown in many acute and chronic inflammatory diseases such as rheumatoid arthritis, inflammatory bowel disease (IBD), osteoarthritis, psoriasis, septic shock, encephalitis and respiratory distress syndrome. IL-I has also been shown to play a role in several other illnesses including Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases.
- IBD inflammatory bowel disease
- osteoarthritis psoriasis
- septic shock encephalitis
- respiratory distress syndrome IL-I has also been shown to play a role in several other illnesses including Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases.
- Interleukin-1 plays a role in the regulation of inflammation by stimulating generation of inflammatory mediators like IL-6, prostaglandin E 2 (PGE 2 ; via the induction the COX-2 and PGE synthase (mPGES) expression) and itself, therefore enhancing the process of inflammation.
- PGE 2 prostaglandin E 2
- mPGES COX-2 and PGE synthase
- Another biological activity of IL-I is to induce proliferation and activation of numerous cell types like T-cells (Cullinan, et al. 1998; Dunne and O'Neill 2003).
- IL-I may also increase the level of collagenase in an arthritic joint and has been implicated in the acute and chronic stages of immunopathology in rheumatoid arthritis.
- IL-I may be responsible for altering endothelial cell function, directing the chemotaxis of lymphocytes and leucocytes into synovial tissue and inducing the secretion of latent collagenase by chondrocytes and fibroblasts.
- IL-I is considered, along with TNF, as the prototype of inflammatory cytokines.
- TNF the prototype of inflammatory cytokines.
- the effects of IL-I are not limited to inflammation and this cytokine also plays a role in bone formation and remodeling, insulin secretion and fever induction.
- IL-I As a major pro-inflammatory cytokine, IL-I is a potentially powerful target for therapeutic intervention in diseases like articular cartilage injury such as in arthritis. Osteoarthritis and rheumatoid arthritis are only second to heart disease for causing work disabilities in North America and their prevalence increase dramatically with age (Hallegua and Weisman 2002).
- the present invention encompasses the discovery that IL-IR modulatory peptides (e.g., IL-IR AllosteramersTM) can be optimized by incorporating one or more lactams and/or Bab residues into the peptide.
- IL-IR modulatory peptides e.g., IL-IR AllosteramersTM
- the present invention provides, among other things, peptidomimetics that have improved ability to modulate (e.g., inhibit or activate) IL-I receptor activity.
- the present invention provides an IL-IR modulatory peptidomimetic comprising one or more lactams and/or Bab residues.
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP).
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP).
- SEQ ID NO:1 IL-I receptor
- IL-lRacP IL-I receptor accessory protein
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) amino acids from any one peptide selected from SEQ ID NO:3-40, wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in said peptide sequence.
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) amino acids from RYTVELA (SEQ ID NO: 12) wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in RYTVELA (SEQ ID NO: 12).
- lactams suitable for the present invention have the structure of formula (I) or (II), as defined and described herein.
- lactams suitable for the present invention are selected from the group consisting of alpha- amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), beta-hydroxy-alpha-amino- gamma-lactam (Agl(4-OH)), and combination thereof
- lactams suitable for the present invention contain I 2 aa, I 9 aa, or Qaa.
- the present invention provides a peptidomimetic modified from any one of SEQ ID NO:3-40, wherein the peptidomimetic comprises at least three (e.g., at least four, five or six) amino acids from the corresponding peptide sequence and a lactam and/or Bab residue replacement or insertion. In some embodiments, the at least three (e.g., at least four, five or six) amino acids maintain their relative positions as they appear in the corresponding peptide sequence. In some embodiments, the invention provides peptidomimetics modified from any one of peptide as shown in Tables 1 and 2 (e.g., SEQ ID NOs:3-60), wherein the modification comprises a lactam replacement or insertion.
- Tables 1 and 2 e.g., SEQ ID NOs:3-60
- a lactam suitable for the present invention is selected from the group consisting of alpha-amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), beta-hydroxy-alpha- amino-gamma-lactam (Agl(4-OH)), and combination thereof
- a lactam suitable for the present invention contains I 2 aa, I 9 aa, or Qaa.
- a peptidomimetic of the present invention comprises at least one D-amino acid. In some embodiments, all of the amino acids present in a peptidomimetic of the present invention are D-amino acids.
- a peptidomimetic of the present invention comprises one or more modifications to increase protease resistance, serum stability and/or bioavailability, such as N- and/or C-terminal acetylation, glycosylation, biotinylation, amidation, substitution with D-amino acid or unnatural amino acid, and/or cyclization of the peptide.
- the present invention provides a method of modifying an IL-
- IR modulatory peptide e.g., AllosteramerTM
- a method according to the invention includes steps of: (a) providing a peptide that modulates the IL-IR activity; (b) modifying the peptide by introducing one or more lactams and/or Bab residues into the peptide; and (c) testing the IL-IR modulatory activity of the modified peptide.
- the peptide modulates the IL-IR activity non-competitively.
- the peptide is a Negative Allosteric Modulator (NAM) of the IL-IR activity.
- NAM Negative Allosteric Modulator
- the peptide is a Positive Allosteric Modulator (PAM) of the IL-IR activity. In some embodiments, the peptide is both an NAM and a PAM of the IL-IR activity. In some embodiments, a method according to the invention further includes a step of identifying a modified peptide having improved ability to modulate (e.g., inhibit or activate) the IL-IR activity as compared to a control (e.g., the corresponding unmodified parent peptide).
- PAM Positive Allosteric Modulator
- the present invention also encompasses any IL-IR modulatory peptide and modified IL-IR modulatory peptide according to various methods described herein.
- the invention provides a peptidomimetic having a sequence of any one of SEQ ID NO:61-105.
- the invention further relates to pharmaceutical compositions containing various peptides or peptidomimetics described herein and their uses.
- the present invention provides a method of inhibiting the activity of an IL-I receptor in a cell by contacting the cell with a peptide or peptidomimetic described herein.
- the present invention further provides a method of treating an IL-I related disease, disorder or condition (e.g., an inflammatory disease, disorder or condition) by administering to a subject in need of treatment a peptide or peptidomimetic described herein.
- the term “approximately” or “about” refers to a range of values that fall within 25%, 20%, 19%, 18%, 17%, 16%, 15%, 14%, 13%, 12%, 11%, 10%, 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, 1%, or less in either direction (greater than or less than) of the stated reference value unless otherwise stated or otherwise evident from the context (except where such number would exceed 100% of a possible value).
- the terms “about” and “approximately” are used as equivalents.
- agonist refers to a compound that directly or indirectly stimulates, activates or enhances a biological activity of a target protein.
- an IL-I agonist is a compound that directly or indirectly stimulates, activates or enhances a biological activity of IL-I or IL-lR/IL-lRacP.
- agonist also includes potentiators of known compounds with agonist properties.
- an agonist can be a peptide or peptidomimetic.
- an agonist is a peptide or peptidomimetic that stimulates, activates or enhances an activity of IL-I or IL-lR/IL-lRacP without competing with a natural ligand of the IL-I receptor.
- Such an agonist is also referred to as an allosteric agonist or a Positive Allosteric Modulator (PAM).
- PAM Positive Allosteric Modulator
- an IL-I agonist binds to IL-I or IL-lR/IL-lRacP without competing with the binding of a natural ligand.
- Antagonist refers to any molecule that directly or indirectly inhibits, suppresses, inactivates and/or decreases an activity of a target protein.
- an IL-I antagonist is a compound that directly or indirectly stimulates, activates or enhances an activity of IL-I or IL-lR/IL-lRacP.
- antagonist also includes potentiators of known compounds with antagonistic properties.
- an antagonist can be a peptide or peptidomimetic.
- an antagonist is a peptide or peptidomimetic that inhibits, suppresses, inactivates and/or decreases an activity of IL-I or IL-lR/IL-lRacP without competing with a natural ligand of the IL-I receptor.
- Such an antagonist is also referred to as an allosteric antagonist or a Negative Allosteric Modulator (NAM).
- NAM Negative Allosteric Modulator
- an IL-I antagonist binds to IL-I or IL-lR/IL-lRacP without competing with the binding of a natural ligand.
- amino acid refers to any compound and/or substance that can be incorporated into a polypeptide chain.
- amino acid refers to a molecule containing both an amino group and a carboxyl group.
- an amino acid is an alpha amino acid.
- Suitable amino acids include, without limitation, natural alpha-amino acids such as L-isomers of the 20 common naturally occurring alpha-amino acids, D-isomers of naturally occurring alpha- amino acids, unnatural alpha-amino acids, natural beta-amino acids ⁇ e.g., beta-alanine), and unnatural beta-amino acids.
- ⁇ , ⁇ -Disubstituted amino acids, N-alkyl amino acids, lactic acid and other unconventional amino acids may also be suitable components for the peptides or peptidomimetics of the present invention.
- unconventional amino acids include but are not limited to citrulline, ornithine, norvaline, 4-(£)-butenyl-4(i?) -methyl-N- methylthreonine (MeBmt), N-methyl-leucine (MeLeu), aminoisobutyric acid, statine, N- methyl-alanine (MeAIa).
- the twenty natural amino acids and their abbreviations follow conventional usage. However, unless specifically noted, an amino acid abbreviation should cover both L- and D-isomers.
- animal refers to any member of the animal kingdom. In some embodiments, “animal” refers to humans, at any stage of development. In some embodiments, “animal” refers to non-human animals, at any stage of development. In certain embodiments, the non-human animal is a mammal (e.g., a rodent, a mouse, a rat, a rabbit, a monkey, a dog, a cat, a sheep, cattle, a primate, and/or a pig). In some embodiments, animals include, but are not limited to, mammals, birds, reptiles, amphibians, fish, insects, and/or worms. In some embodiments, an animal may be a transgenic animal, genetically-engineered animal, and/or a clone.
- mammal e.g., a rodent, a mouse, a rat, a rabbit, a monkey, a dog, a cat, a sheep, cattle, a primate, and/or a pig.
- biological activity when used in the context of IL-I receptor, or "IL-lR/IL-lRacP activity” or “receptor activity,” refers to any detectable biological activity of IL-I or IL-lR/IL-lRacP gene or protein. It can include specific biological activity of IL-lR/IL-lRacP proteins in cell signaling. A suitable biological activity may be measured by PGE 2 production, proliferation assays and changes in down stream gene and protein expression (e.g., IL-6, IL-I, COX enzymes). A suitable biological activity may also include for example, binding ability to, e.g., substrates, interacting proteins and the like.
- measuring the effect of a test compound on its ability to inhibit or increase (e.g., modulate) IL-I response or IL-IR binding or interaction is considered herein as measuring a biological activity of IL-IR according to the present invention.
- a biological activity of IL-IR is considered herein as measuring a biological activity of IL-IR according to the present invention.
- the receptor subunits e.g., IL-IR and IL-lRacP
- the receptor subunits e.g., IL-IR and IL-lRacP
- IL-lR/IL-lRacP biological activity also includes any biochemical measurement of this receptor, conformational changes, phosphorylation status, any downstream effect of the receptor's signaling such as protein phosphorylation (or any other posttranslational modification e.g. ubiquitination, sumolylation, palmytoylation, prenylation etc), kinase effect or any other feature of the protein that can be measured with techniques known in the art.
- IL-lR/IL-lRacP biological activity includes a detectable change in cell architecture, cell proliferation or other cell phenotype that is modulated by the action of a ligand (i.e., IL- 1) on the predetermined receptor.
- Control has its art-understood meaning of being a standard against which results are compared. Typically, controls are used to augment integrity in experiments by isolating variables in order to make a conclusion about such variables.
- a control is a reaction or assay that is performed simultaneously with a test reaction or assay to provide a comparator. In one experiment, the "test” (i.e., the variable being tested) is applied. In the second experiment, the "control,” the variable being tested is not applied.
- a control is a historical control (i.e., of a test or assay performed previously, or an amount or result that is previously known).
- a control is or comprises a printed or otherwise saved record. A control may be a positive control or a negative control.
- a "functional" biological molecule is a biological molecule in a form in which it exhibits a property and/or activity by which it is characterized.
- Functional derivative denotes, when used in the context of a functional derivative of an amino acid sequence, refers to a molecule that shares structural similarity and retains a biological activity that is substantially similar to that of the original sequence.
- a functional derivative or equivalent may be a natural derivative or may be prepared synthetically.
- Such derivatives include amino acid sequences having substitutions, deletions, or additions of one or more amino acids, provided that the biological activity of the protein is conserved (e.g., it acts as a noncompetitive antagonist of the IL-I receptor).
- the substituting amino acid generally has chemico-physical properties, which are similar to that of the substituted amino acid.
- the similar chemico-physical properties include, similarities in charge, bulkiness, hydrophobicity, hydrophylicity and the like.
- the term “functional derivatives” is intended to include “segments”, “variants”, “analogs” or “chemical derivatives” of the subject matter of the present invention.
- a functional derivative shares at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% identity to the original amino acid sequence.
- IL-I refers to either or both IL-l ⁇ and IL-l ⁇ .
- IL refers to the broad family of interleukins.
- Inhibiting The terms “inhibiting,” “reducing” or “prevention,” or any variation of these terms, when used in the claims and/or the specification include any measurable decrease as compared to a baseline control or complete inhibition of the receptor activity to achieve a desired result.
- a peptide is said to be inhibiting IL-I activity when a decrease in PGE 2 production is measured following a treatment with the peptides, peptide derivatives or peptidomimetics of the present invention as compared to in the absence of these peptides.
- in vitro refers to events that occur in an artificial environment, e.g., in a test tube or reaction vessel, in cell culture, etc., rather than within a multi-cellular organism.
- in vivo refers to events that occur within a multi-cellular organism such as a non-human animal.
- Inflammatory disease As used herein, the term an
- an inflammatory disease, disorder or condition refers to any disease, disorder, or condition in which the immune system abnormally activated or suppressed.
- an inflammatory disease, disorder, or condition that can be treated according to the invention is inflammation of the upper and lower respiratory tract, for example, bronchial asthma, allergic asthma, non-allergic asthma, lymphomatous tracheobronchitis, allergic hypersensitivity or a hypersecretion condition, such as chronic bronchitis and cystic fibrosis; pulmonary fibrosis of various aetiologies (e.g., idiopathic pulmonary fibrosis), chronic obstructive pulmonary disease (COPD), sarcoidosis, allergic and non-allergic rhinitis; allergic or non-allergic urticaria; a skin-related diseases characterized by deregulated inflammation, tissue remodeling, angiogenesis, and neoplasm, a disease of the gastrointestinal tract, such as Crohn's disease, Hirschsprung's disease, diarrhea, malabsorption conditions,
- Additional examples of inflammatory disorders include acne vulgaris; acute respiratory distress syndrome; Addison's disease; allergic intraocular inflammatory diseases, ANCA-associated small-vessel vasculitis; ankylosing spondylitis; atopic dermatitis; autoimmune hemolytic anemia; autoimmune hepatitis; Behcet's disease; Bell's palsy; bullous pemphigoid; cerebral ischaemia; cirrhosis; Cogan's syndrome; contact dermatitis; Cushing's syndrome; dermatomyositis; diabetes mellitus; discoid lupus erythematosus; lupus nephritis; eosinophilic fasciitis; erythema nodosum; exfoliative dermatitis; focal glomerulosclerosis; focal segmental glomerulosclerosis; segmental glomerulosclerosis; giant cell arteritis; gout; gouty arthritis; graft-versus
- Isolated refers to a substance and/or entity that has been (1) separated from at least some of the components with which it was associated when initially produced (whether in nature and/or in an experimental setting), and/or (2) produced, prepared, and/or manufactured by the hand of man. Isolated substances and/or entities may be separated from at least about 10%, about 20%, about 30%, about 40%, about 50%, about 60%, about 70%, about 80%, about 90%, about 95%, about 98%, about 99%, substantially 100%, or 100% of the other components with which they were initially associated.
- isolated agents are more than about 80%, about 85%, about 90%, about 91%, about 92%, about 93%, about 94%, about 95%, about 96%, about 97%, about 98%, about 99%, substantially 100%, or 100% pure.
- a substance is "pure” if it is substantially free of other components.
- isolated cell refers to a cell not contained in a multi-cellular organism.
- Modulator refers to a compound that alters or elicits an activity.
- the presence of a modulator may result in an increase or decrease in the magnitude of a certain activity compared to the magnitude of the activity in the absence of the modulator.
- a modulator is an inhibitor or antagonist, which decreases the magnitude of one or more activities.
- an inhibitor completely prevents one or more biological activities.
- a modulator is an activator or agonist, which increases the magnitude of at least one activity.
- the presence of a modulator results in an activity that does not occur in the absence of the modulator.
- the terms “inhibiting,” “reducing,” “preventing,” or “antagonizing,” or any variations of these terms as used herein, refer to a measurable decrease of a biological activity. In some embodiments, the decrease is a 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 95% reduction in the biological activity relative to a control. As used herein, the terms “stimulating,” “increasing,” or “agonizing,” or any variations of these terms as used herein, refer to a measurable increase of a biological activity. In some embodiments, the increase is a 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 95% increase in the biological activity relative to a control.
- Molecule As used herein, the terms “molecule”, “compound”, “agent” or
- ligand are used interchangeably and broadly to refer to natural, synthetic or semi-synthetic molecules or compounds.
- molecule therefore denotes for example chemicals, macromolecules, cell or tissue extracts (from plants or animals) and the like.
- Non-limiting examples of molecules include peptides, antibodies, carbohydrates and pharmaceutical agents.
- the agents can be selected and screened by a variety of means including random screening, rational selection and by rational design using for example protein or ligand modeling methods such as computer modeling.
- the terms “rationally selected” or “rationally designed” are meant to define compounds which have been chosen based on the configuration of interacting domains of the present invention or on the configuration of antagonist peptides and/or peptidomimetics of the present invention.
- peptide analogs can be generated by modeling as mentioned above.
- polypeptides of the present invention are modified to enhance their stability. In some cases this modification enhances the biological activity of the peptide.
- the molecules identified in accordance with the teachings of the present invention have a therapeutic value in diseases or conditions in which the physiology or homeostasis of the cell and/or tissue is compromised by a defect in IL-I production or response.
- Non-limiting examples of such diseases or conditions include acute and chronic inflammatory diseases such as rheumatoid arthritis, inflammatory bowel disease (IBD), osteoarthritis, psoriasis, septic shock, encephalitis and respiratory distress syndrome, Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases.
- IBD inflammatory bowel disease
- osteoarthritis psoriasis
- septic shock encephalitis and respiratory distress syndrome
- Alzheimer's disease periventricular leukomalacia
- meningitis stroke
- a number of autoimmune diseases include acute and chronic inflammatory diseases such as rheumatoid arthritis, inflammatory bowel disease (IBD), osteoarthritis, psoriasis, septic shock, encephalitis and respiratory distress syndrome, Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases.
- API-X
- Peptides As used herein, the term "peptides" refers to macromolecules which comprise a multiplicity of amino or imino acids (or their equivalents) in peptide linkage. In the polypeptide or peptide notation used herein, the left-hand direction is the amino-terminal direction and the right-hand direction is the carboxy-terminal direction, in accordance with standard usage and convention. Peptides may include moieties other than amino acids (e.g., may be glycoproteins, proteoglycans, etc.) and/or may be otherwise processed or modified. Peptides may contain L-amino acids, D-amino acids, or both and may contain any of a variety of amino acid modifications or analogs known in the art.
- peptides may comprise natural amino acids, non-natural amino acids, synthetic amino acids, and combinations thereof.
- a short peptide refers to any peptide containing up to 25 amino acids (e.g., up to 20, 15, 12, 10, 9, 8, 7, 6, 5, 4, or 3). In some embodiments, a short peptide contains 5-25 amino acids.
- peptides also include peptidomimetics unless indicated otherwise.
- composition As used herein, the term
- pharmaceutically acceptable carrier refers to a non-toxic carrier medium that does not destroy the pharmacological activity of the compound with which it is formulated.
- purified refers to a molecule (e.g. IL-I receptor, peptides, peptide derivatives, peptidomimetics, nucleic acids, proteins etc.) having been separated from a component of the composition in which it was originally present.
- a “purified IL-I receptor” has been purified to a level not found in nature.
- a “substantially pure” molecule is a molecule that is lacking in most other components (e.g., 30, 40, 50, 60, 70, 75, 80, 85, 90, 95, 96, 97, 98, 99, 100% free of contaminants).
- sample components include nucleic acids in a generally aqueous solution that may include other components, such as proteins, carbohydrates, or lipids.
- a separating or purifying step preferably removes at least about 70% (e.g., 70, 75, 80, 85, 90, 95, 96, 97, 98, 99, 100%), more preferably at least about 90% (e.g., 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100%) and, even more preferably, at least about 95% (e.g., 95, 96, 97, 98, 99, 100%) of the other components present in the sample from the desired component.
- the units e.g. 66, 67...81, 82,...91, 92%.
- Reverse peptide refers to peptides arranged in a reverse sequence relative to a corresponding region of the IL-IR or IL-lRacP protein.
- reverse-D peptide refers herein to peptides containing D-amino acids, arranged in a reverse sequence relative to a corresponding peptide containing L-amino acids. For example, the C-terminal residue of an L-peptide becomes N-terminal for the reverse D-peptide, and so forth.
- reverse D-peptides may often retain the same tertiary conformation and therefore the same activity, as the L-amino acid peptides. It is also contemplated that a D-peptide may be more stable and resistant to enzymatic degradation in vitro and in vivo. Therefore, a D- peptide may have greater therapeutic efficacy than the corresponding L-peptide.
- Subject refers to an animal, preferably a mammal, most preferably a human who is the object of treatment, observation or experiment.
- the term “substantially” refers to the qualitative condition of exhibiting total or near-total extent or degree of a characteristic or property of interest.
- One of ordinary skill in the biological arts will understand that biological and chemical phenomena rarely, if ever, go to completion and/or proceed to completeness or achieve or avoid an absolute result.
- the term “substantially” is therefore used herein to capture the potential lack of completeness inherent in many biological and chemical phenomena.
- Susceptible to An individual who is "susceptible to" a disease, disorder, and/or condition has not been diagnosed with the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition may not exhibit symptoms of the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition will develop the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition will not develop the disease, disorder, and/or condition.
- Therapeutically effective amount As used herein, the term "therapeutically effective amount" of a therapeutic agent means an amount that is sufficient, when administered to a subject suffering from or susceptible to a disease, disorder, and/or condition, to treat, diagnose, prevent, and/or delay the onset of the symptom(s) of the disease, disorder, and/or condition. It will be appreciated by those of ordinary skill in the art that a therapeutically effective amount is typically administered via a dosing regimen comprising at least one unit dose.
- Therapeutic agent As used herein, the phrase “therapeutic agent” refers to any agent that, when administered to a subject, has a therapeutic effect and/or elicits a desired biological and/or pharmacological effect. In some embodiments, a therapeutic agent of the invention refers to a peptide inhibitor or derivatives thereof according to the invention.
- Treating refers to any method used to partially or completely alleviate, ameliorate, relieve, inhibit, prevent, delay onset of, reduce severity of and/or reduce incidence of one or more symptoms or features of a particular disease, disorder, and/or condition. Treatment may be administered to a subject who does not exhibit signs of a disease and/or exhibits only early signs of the disease for the purpose of decreasing the risk of developing pathology associated with the disease.
- structures depicted herein are also meant to include all isomeric (e.g., enantiomeric, diastereomeric, and geometric (or conformational)) forms of the structure; for example, the R and S configurations for each asymmetric center, Z and E double bond isomers, and Z and E conformational isomers. Therefore, single stereochemical isomers as well as enantiomeric, diastereomeric, and geometric (or conformational) mixtures of the present compounds are within the scope of the invention. Unless otherwise stated, all tautomeric forms of the compounds of the invention are within the scope of the invention.
- structures depicted herein are also meant to include compounds that differ only in the presence of one or more iso topically enriched atoms.
- compounds having the present structures including the replacement of hydrogen by deuterium or tritium, or the replacement of a carbon by a 13 C- or 14 C-enriched carbon are within the scope of this invention.
- Such compounds are useful, for example, as analytical tools, as probes in biological assays, or as therapeutic agents in accordance with the present invention.
- a particular enantiomer may, in some embodiments be provided substantially free of the corresponding enantiomer, and may also be referred to as "optically enriched.”
- “Optically-enriched,” as used herein, means that the compound is made up of a significantly greater proportion of one enantiomer. In certain embodiments the compound is made up of at least about 90% by weight of a preferred enantiomer. In other embodiments the compound is made up of at least about 95%, 98%, or 99% by weight of a preferred enantiomer.
- Preferred enantiomers may be isolated from racemic mixtures by any method known to those skilled in the art, including chiral high pressure liquid chromatography (HPLC) and the formation and crystallization of chiral salts or prepared by asymmetric syntheses.
- HPLC high pressure liquid chromatography
- Jacques et al. Enantiomers, Racemates and Resolutions (Wiley Interscience, New York, 1981); Wilen, et al., Tetrahedron 11:2125 (1977); Eliel, E. L. Stereochemistry of Carbon Compounds (McGraw-Hill, NY, 1962); Wilen, S.H. Tables of Resolving Agents and Optical Resolutions p. 268 (E.L. Eliel, Ed., Univ. of Notre Dame Press, Notre Dame, IN 1972).
- Alkenyl denotes a monovalent group derived from a straight- or branched-chain aliphatic moiety having at least one carbon- carbon double bond by the removal of a single hydrogen atom. In certain embodiments, alkenyl contains 2-6 carbon atoms. In certain embodiments, alkenyl contains 2-5 carbon atoms. In some embodiments, alkenyl contains 2-4 carbon atoms. In another embodiment, alkenyl contains 2-3 carbon atoms. Alkenyl groups include, for example, ethenyl ("vinyl”), propenyl ("allyl”), butenyl, l-methyl-2-buten-l-yl, and the like.
- Alkyl refers to a monovalent saturated, straight- or branched-chain hydrocarbon radical derived from an aliphatic moiety containing between one and six carbon atoms by removal of a single hydrogen atom. In some embodiments, alkyl contains 1-5 carbon atoms. In another embodiment, alkyl contains 1-4 carbon atoms. In still other embodiments, alkyl contains 1-3 carbon atoms. In yet another embodiment, alkyl contains 1-2 carbons.
- alkyl radicals include, but are not limited to, methyl, ethyl, n-propyl, isopropyl, n-butyl, iso-butyl, sec-butyl, sec-pentyl, iso- pentyl, tert-butyl, n-pentyl, neopentyl, n-hexyl, sec-hexyl, n-heptyl, n-octyl, n-decyl, n- undecyl, dodecyl, and the like.
- Alkylene refers to a bivalent alkyl group.
- An "alkylene chain” is a polymethylene group, i.e., -(CH 2 )D-, wherein n is a positive integer, preferably from 1 to 6, from 1 to 4, from 1 to 3, from 1 to 2, or from 2 to 3.
- a substituted alkylene chain is a polymethylene group in which one or more methylene hydrogen atoms are replaced with a substituent. Suitable substituents include those described below for a substituted aliphatic group.
- Alkynyl refers to a monovalent group derived from a straight- or branched-chain aliphatic moiety having at least one carbon- carbon triple bond by the removal of a single hydrogen atom. In certain embodiments, alkynyl contains 2-6 carbon atoms. In certain embodiments, alkynyl contains 2-5 carbon atoms. In some embodiments, alkynyl contains 2-4 carbon atoms. In another embodiment, alkynyl contains 2-3 carbon atoms. Representative alkynyl groups include, but are not limited to, ethynyl, 2-propynyl ("propargyl”), 1-propynyl, and the like.
- Aliphatic denotes a hydrocarbon moiety that may be straight-chain (i.e., unbranched), branched, or cyclic (including fused, bridging, and spiro-fused polycyclic) and may be completely saturated or may contain one or more units of unsaturation, but which is not aromatic. Unless otherwise specified, aliphatic groups contain 1-6 carbon atoms. In some embodiments, aliphatic groups contain 1-4 carbon atoms, and in yet other embodiments aliphatic groups contain 1-3 carbon atoms.
- Suitable aliphatic groups include, but are not limited to, linear or branched, alkyl, alkenyl, and alkynyl groups, and hybrids thereof such as (cycloalkyl)alkyl, (cycloalkenyl)alkyl or (cycloalkyl)alkenyl.
- Aryl The term “aryl” used alone or as part of a larger moiety as in “aralkyl”,
- aryloxy refers to monocyclic and bicyclic ring systems having a total of five to 10 ring members, wherein at least one ring in the system is aromatic and wherein each ring in the system contains three to seven ring members.
- aryl may be used interchangeably with the term “aryl ring”.
- aryl refers to an aromatic ring system which includes, but not limited to, phenyl, biphenyl, naphthyl, anthracyl and the like, which may bear one or more substituents.
- aryl is a group in which an aromatic ring is fused to one or more non-aromatic rings, such as indanyl, phthalimidyl, naphthimidyl, phenantriidinyl, or tetrahydronaphthyl, and the like.
- Cycloalkylene refers to a bivalent cycloalkyl group.
- a cycloalkylene group is a 1,1 -cycloalkylene
- a cycloalkylene group is a 1 ,2-cycloalkylene group or a 1,3-
- cycloalkylene group exemplary 1 ,2-cycloalkylene groups include
- Cycloaliphatic The terms “cycloaliphatic”, “carbocycle”, “carbocyclyl”,
- Carbocyclo or “carbocyclic”, used alone or as part of a larger moiety, refer to a saturated or partially unsaturated cyclic aliphatic monocyclic or bicyclic ring systems, as described herein, having from 3 to 10 members, wherein the aliphatic ring system is optionally substituted as defined above and described herein.
- Cycloaliphatic groups include, without limitation, cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cycloheptyl, cycloheptenyl, cyclooctyl, cyclooctenyl, and cyclooctadienyl.
- the cycloalkyl has 3-6 carbons.
- cycloaliphatic also include aliphatic rings that are fused to one or more aromatic or nonaromatic rings, such as decahydronaphthyl, tetrahydronaphthyl, decalin, or bicyclo[2.2.2]octane, where the radical or point of attachment is on an aliphatic ring.
- Halogen refers to an atom selected from fluorine (fluoro, -F), chlorine (chloro, -Cl), bromine (bromo, -Br), and iodine (iodo, -I).
- Heteroaryl refers to groups having 5 to 10 ring atoms, preferably 5, 6, or 9 ring atoms; having 6, 10, or 14 ⁇ electrons shared in a cyclic array; and having, in addition to carbon atoms, from one to five heteroatoms.
- heteroatom refers to nitrogen, oxygen, or sulfur, and includes any oxidized form of nitrogen or sulfur, and any quaternized form of a basic nitrogen.
- Heteroaryl groups include, without limitation, thienyl, furanyl, pyrrolyl, imidazolyl, pyrazolyl, triazolyl, tetrazolyl, oxazolyl, isoxazolyl, oxadiazolyl, thiazolyl, isothiazolyl, thiadiazolyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, indolizinyl, purinyl, naphthyridinyl, and pteridinyl.
- heteroaryl and “heteroar-”, as used herein, also include groups in which a heteroaromatic ring is fused to one or more aryl, cycloaliphatic, or heterocyclyl rings, where the radical or point of attachment is on the heteroaromatic ring.
- Nonlimiting examples include indolyl, isoindolyl, benzothienyl, benzofuranyl, dibenzofuranyl, indazolyl, benzimidazolyl, benzthiazolyl, quinolyl, isoquinolyl, cinnolinyl, phthalazinyl, quinazolinyl, quinoxalinyl, 4H- quinolizinyl, carbazolyl, acridinyl, phenazinyl, phenothiazinyl, phenoxazinyl, tetrahydroquinolinyl, tetrahydroisoquinolinyl, and pyrido[2,3-b]-l,4-oxazin-3(4 ⁇ )-one.
- heteroaryl group may be mono- or bicyclic.
- heteroaryl may be used interchangeably with the terms “heteroaryl ring”, “heteroaryl group”, or “heteroaromatic”, any of which terms include rings that are optionally substituted.
- heteroarylkyl refers to an alkyl group substituted by a heteroaryl, wherein the alkyl and heteroaryl portions independently are optionally substituted.
- Heteroatom means one or more of oxygen, sulfur, nitrogen, phosphorus, or silicon (including, any oxidized form of nitrogen, sulfur, phosphorus, or silicon; the quaternized form of any basic nitrogen or; a substitutable nitrogen of a heterocyclic ring, for example N (as in 3,4-dihydro-2H-pyrrolyl), NH (as in pyrrolidinyl) or NR + (as in N-substituted pyrrolidinyl)).
- Heterocycle As used herein, the terms “heterocycle”, “heterocyclyl”,
- heterocyclic radical and “heterocyclic ring” are used interchangeably and refer to a stable 4- to 7-membered monocyclic or 7-10-membered bicyclic heterocyclic moiety that is either saturated or partially unsaturated, and having, in addition to carbon atoms, one or more, preferably one to four, heteroatoms, as defined above.
- nitrogen includes a substituted nitrogen.
- the nitrogen may be N (as in 3,4-dihydro-2H-pyrrolyl), NH (as in pyrrolidinyl), or + NR (as in N- substituted pyrrolidinyl).
- a heterocyclic ring can be attached to its pendant group at any heteroatom or carbon atom that results in a stable structure and any of the ring atoms can be optionally substituted.
- saturated or partially unsaturated heterocyclic radicals include, without limitation, tetrahydrofuranyl, tetrahydrothienyl, pyrrolidinyl, pyrrolidonyl, piperidinyl, pyrrolinyl, tetrahydroquinolinyl, tetrahydroisoquinolinyl, decahydroquinolinyl, oxazolidinyl, piperazinyl, dioxanyl, dioxolanyl, diazepinyl, oxazepinyl, thiazepinyl, morpholinyl, and quinuclidinyl.
- heterocycle used interchangeably herein, and also include groups in which a heterocyclyl ring is fused to one or more aryl, heteroaryl, or cycloaliphatic rings, such as indolinyl, 3H-indolyl, chromanyl, phenanthridinyl, 2-azabicyclo[2.2.1]heptanyl, octahydroindolyl, or tetrahydroquinolinyl, where the radical or point of attachment is on the heterocyclyl ring.
- heterocyclyl group may be mono- or bicyclic.
- heterocyclylalkyl refers to an alkyl group substituted by a heterocyclyl, wherein the alkyl and heterocyclyl portions independently are optionally substituted.
- substituents of the invention may contain “optionally substituted” moieties.
- substituted whether preceded by the term “optionally” or not, means that one or more hydrogens of the designated moiety are replaced with a suitable substituent.
- an “optionally substituted” group may have a suitable substituent at each substitutable position of the group, and when more than one position in any given structure may be substituted with more than one substituent selected from a specified group, the substituent may be either the same or different at each position.
- Combinations of substituents envisioned under this invention are preferably those that result in the formation of stable or chemically feasible compounds.
- stable refers to compounds that are not substantially altered when subjected to conditions to allow for their production, detection, and, in certain embodiments, their recovery, purification, and use for one or more of the purposes disclosed herein.
- Suitable monovalent substituents on R 0 are independently halogen, -(CH 2 ) 0 2 R*, -(haloR*), -(CH 2 ) 0 2 OH, -(CH 2 ) 0 2 OR*, -(CH 2 ) 0 2 CH(OR*) 2 ; -O(haloR'), -CN, -N 3 , -(CH 2 ) 0 2 C(O)R*, -(CH 2 ) 0 2 C(O)OH, -(CH 2 ) 0 2 C(O)OR*, -(CH 2 ) 0 .
- each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently selected from C 1 ⁇ t aliphatic, -CH 2 Ph, -0(CH 2 )o-iPh, or a 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Suitable divalent substituents that are bound to vicinal substitutable carbons of an "optionally substituted” group include: -O(CR 2 ) 2 _ 3 O-, wherein each independent occurrence of R is selected from hydrogen, Ci_6 aliphatic which may be substituted as defined below, or an unsubstituted 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Suitable substituents on the aliphatic group of R include halogen, -R*,
- each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently Ci_ 4 aliphatic, -CH 2 Ph, -O(CH 2 ) 0 _iPh, or a 5-6- membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Suitable substituents on a substitutable nitrogen of an "optionally substituted" group include -R f , -NR f 2 , -C(O)R f , -C(O)OR f , -C(O)C(O)R f , -C(O)CH 2 C(O)R 1 ⁇ , -S(O) 2 R 1 ; -S(O) 2 NR ⁇ , -C(S)NR ⁇ , -C(NH)NR ⁇ , or -N(R t )S(O) 2 R t ; wherein each R f is independently hydrogen, Ci_6 aliphatic which may be substituted as defined below, unsubstituted -OPh, or an unsubstituted 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the taken together with their intervening atom(s) form an un
- Suitable substituents on the aliphatic group of R ⁇ are independently halogen,
- each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently Ci_4aliphatic, -CH 2 Ph, -0(CH 2 )o iPh, or a 5-6- membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Partially unsaturated refers to a ring moiety that includes at least one double or triple bond between ring atoms but is not aromatic.
- the term “partially unsaturated” is intended to encompass rings having multiple sites of unsaturation, but is not intended to include aryl or heteroaryl moieties, as herein defined.
- Unsaturated means that a moiety has one or more units of unsaturation.
- Figure 1 is an exemplary graph showing the inhibition of IL-I induced TF-I cell proliferation by peptides 54-59.
- Figure 2 is an exemplary graph showing the inhibition of IL-I induced TF-I cell proliferation by compounds 75-78.
- Figure 3 illustrates activity of exemplary peptidomimetics 101.164-101.167.
- the present invention provides, among other things, peptidomimetics containing one or more lactams and/or Bab residues that can effectively modulate (e.g., inhibit or activate) the biological activity of IL-IR.
- peptidomimetics of the present invention are modified from IL-IR modulatory peptides (such as AllosteramersTM) by lactam and/or Bab replacement or insertion.
- Peptidomimetics according to the present invention can be used to treat various IL-I related diseases, disorders or conditions.
- IL-IR modulatory peptides may be optimized according to the present invention.
- Suitable IL-IR modulatory peptides include antagonistic peptides or agonistic peptides.
- an IL-IR antagonistic peptide refers to any peptide that can directly or indirectly inhibit, suppress, inactivate and/or decrease the receptor activity of IL-IR and/or IL-lRacP.
- an IL-IR agonistic peptide refers to any peptide that can directly or indirectly activates, enhance, stimulate and/or increase the receptor activity of IL-IR and/or IL-lRacP.
- suitable IL-IR modulatory peptides may be AllosteramersTM (short peptides composed of 5-25 amino acids derived from body's own proteins that can interact with the protein from which it is derived, or with its associated proteins, without competing with a natural ligand) that interact with a region of the extracellular domain of the IL-lR/IL-lRacP receptor complex.
- suitable peptides for the invention modulate the IL-IR receptor activity non-competitively (i.e., without competing with a natural ligand of the receptor).
- a suitable peptides for the invention is a Negative Allosteric Modulator (NAM) of the IL-IR activity.
- NAM Negative Allosteric Modulator
- a suitable peptide for the invention is a Positive Allosteric Modulator (PAM) of the IL-IR activity.
- a suitable peptide is both an NAM and a PAM of the IL-IR activity.
- suitable IL-IR modulatory peptides may be strategically designed to interact with at least one of an extracellular flexible region of the IL- lR/IL-lRacP complex that are responsible for oligomerization, and that are important for the appropriate conformation of the IL-I receptor which enables signaling.
- Such flexible regions include, but are not limited to, juxtamembranous regions, regions containing ⁇ helix, ⁇ sheet, loops and/or ⁇ turns, regions between domains, regions between two ⁇ chains, and combinations thereof.
- IL-IR modulatory peptides are designed based on amino acid sequences that appear within such flexible regions.
- Module X This approach is known as Module X technology and is further described in U.S. Patent No. 7,432,341, entitled “Cytokine receptor modulators and method of modulating cytokine receptor activity,” and in U.S. Pub. No. 20060094663 entitled “Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment,” the entire disclosure of both of which are hereby incorporated by reference.
- suitable IL-IR modulatory peptides may be designed simply based on the primary linear amino acid sequence of extracellular or transmembrane regions of the IL-IR and IL-lRacP protein without first characterizing any tertiary or secondary structure of the receptor.
- This method is also referred to as the Module X "walking" method and is further described in U.S. Provisional Application Serial No. 61/172,533, entitled “TNF receptor antagonists and uses thereof," the entire disclosure of which is hereby incorporated by reference.
- suitable IL-IR modulatory peptides may be designed based on contiguous amino acids that appear in the extracellular and/or transmembrane regions of the IL-I receptor.
- the amino acid sequence of the IL-IR is shown below.
- the projected transmembrane domain is underlined and bolded.
- the extracellular region is N-terminal to the transmembrane domain.
- suitable IL-IR modulatory peptides may be designed based on contiguous amino acids that appear in the extracellular regions of the IL-lRacP.
- the amino acid sequence of an exemplary isoform of the IL-lRacP protein is shown below. The sequences of other iso forms are known in the art.
- the projected transmembrane domain is underlined and bolded.
- the extracellular region is N-terminal to the transmembrane domain.
- a suitable peptide is a short peptide.
- a short peptide includes any peptide that contains up to 25 amino acids (e.g., up to 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 20, or 25 amino acids) or equivalents thereof.
- a suitable peptide contains 5-25 amino acids (e.g., 5-20, 5-15, 5-12, 5-10, 6-25, 6-20, 6-15, 6-12, 6-10, 7-25, 7-20, 7-15, 7-12, or 7-10 amino acids) or equivalents thereof.
- a suitable peptide is 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 20, or 25 amino acids long.
- candidate peptides are designed to contain a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of the IL- lRacP or IL-IR protein.
- a sequence corresponding to at least 5 e.g., at least 6,
- contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence having at least 70% (e.g., at least 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%) identical to the sequence of at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids. Percentage of amino acid sequence identity can be determined by alignment of amino acid sequences.
- Alignment of amino acid sequences can be achieved in various ways that are within the skill in the art, for instance, using publicly available computer software such as BLAST, ALIGN or Megalign (DNASTAR) software. Those skilled in the art can determine appropriate parameters for measuring alignment, including any algorithms needed to achieve maximal alignment over the full length of the sequences being compared.
- the WU-BLAST-2 software is used to determine amino acid sequence identity (Altschul et ah, Methods in Enzymology 266, 460-480 (1996); http://hg.wustl.edu/blast/README.html). WU-BLAST-2 uses several search parameters, most of which are set to the default values.
- HSP score (S) and HSP S2 parameters are dynamic values and are established by the program itself, depending upon the composition of the particular sequence, however, the minimum values may be adjusted and are set as indicated above.
- a sequence corresponding to at least 5 e.g., at least 6,
- contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence otherwise identical to the sequence of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids but incorporating one or more D-amino acid substitutions for corresponding L-amino acids.
- Peptides containing such a sequence are also known as D- isomers.
- a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence that is an inverse of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids.
- Peptides containing such a sequence are also known as reversed L-peptides.
- a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence that is otherwise an inverse of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids but incorporating one or more D-amino acid substitutions for corresponding L-amino acids.
- Peptides containing such a sequence are also known as reversed D-peptides.
- a peptide suitable for the invention contains a sequence that includes at least 4 (e.g., at least 5, 6, or 7) from at least 7 (e.g., at least 8, 9, 10, 11, 12) contiguous amino acids that appear in an extracellular or transmembrane region of the IL- lRacP or IL-IR protein, wherein the at least 4 (e.g., at least 5, 6, or 7) amino acids maintain their relative positions and/or spacing as they appear in the extracellular or transmembrane region of the IL-lRacP or IL-IR protein.
- a peptide suitable for the invention contains a sequence that includes at least 4 (e.g., at least 5, 6, or 7) from at least 7 (e.g., at least 8, 9, 10, 11, 12) contiguous amino acids that appear in an extracellular or transmembrane region of the IL-lRacP or IL-IR protein, the at least 4 (e.g., at least 5, 6, or 7) amino acids maintain their relative positions and/or spacing, but in the inverse configuration, as they appear in the extracellular or transmembrane region of the IL-lRacP or IL-IR protein.
- IL-IR antagonistic peptides suitable for the present invention are shown in Table 1.
- Suitable peptides may include naturally-occurring amino acids and/or unnatural amino acids.
- suitable peptides may be composed of all L-amino acids, all D-amino acids, a combination of L- and D-amino acids, or a combination of naturally-occurring and unnatural amino acids.
- Exemplary peptides containing a combination of L-amino acids, D-amino acids and unnatural amino acids are shown in Table 2.
- lower cases represent D-amino acids and upper cases represent L- amino acids.
- conformational constraints can lock the secondary structure of a peptide in a bioactive conformation, thus enhancing biological potency by reducing the entropic cost of binding. If the conformation constraint stabilizes the bioactive conformation, the stabilization often results in a significant increase in biological activity.
- alpha-amino-gamma- lactam (AgI) and beta-amino-gamma-lactam (BgI) can be utilized to constrain the backbone conformation of linear peptides to give beta-turn mimics.
- the gamma-lactam may force the C-terminal amide into the trans-orientation and restricts the psi-torsion angle to the range -125 ⁇ 10°, favoring a type II' beta-turn geometry contingent on configuration.
- BgI too can stabilize a type II' beta-turn conformation contingent on configuration.
- the present invention provides a peptidomimetic comprising one or more lactams of formula (I):
- n of formula (I) is O. In other embodiments, m is 1 or
- n of formula (I) is 1. In other embodiments, n is 0 or 2.
- a lactam of formula (I) is alpha-amino-gamma-lactam
- beta-amino-gamma-lactam BgI
- beta-hydroxy-alpha-amino-gamma-lactam Agl(4- OH)
- a lactam of formula (I) will take up the space of approximately one amino acid residue in a peptidomimetic.
- the present invention provides a peptidomimetic comprising one or more lactams of formula (II):
- each R is independently hydrogen or an optionally substituted group selected from Ci_6 aliphatic; phenyl; a 3- to 7-membered saturated or partially unsaturated carbocyclic ring; a 5- to 6-membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or a 4- to 7-membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or
- two R groups attached to the same nitrogen atom may be taken together with their intervening atoms to form a 4- to 7- membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independent selected from nitrogen, oxygen, and sulfur;
- p is O, 1, or 2; and each q is independently O, 1, 2, or 3.
- p of formula (II) is O. In other embodiments, p is 1 or
- each q of formula (II) is 1 or 2.
- a lactam of formula (II) is indolizidin-2-one amino acid
- a lactam of formula (II) will take up upto two amino acid residue space in a peptidomimetic.
- lactams suitable for the invention are ⁇ -, ⁇ - or ⁇ - lactams. In some embodiments, lactams suitable for the invention are four-, five-, six-, seven- or eight-membered lactams.
- benzylaminobutyryl "Bab” residue may be used to optimize a peptide according to the present invention.
- a peptidomimetic according to the present invention includes one ore more Bab residues as shown below:
- the present invention provides derivatives containing lactams and/or Bab residues of various peptides described herein (e.g., in Tables 1 and 2). Suitable derivatives may contain one or more (e.g., one, two or three) lactam and/or Bab replacements or insertions.
- derivatives according to the invention comprise a lactam and/or Bab insertion or replacement at position 1, 2, 3, 4, 5, 6, 7, 8 or 9 from the N-terminus of any one of the peptides described herein, for example as shown in Tables 1 (SEQ ID NO:3-40) and 2 (SEQ ID NO:41-60).
- derivatives according to the invention comprise a lactam and/or Bab insertion or replacement at position 1, 2, 3, 4, 5, 6, or 7 from the N-terminus of peptide 101.10 RYTVELA (SEQ ID NO:12).
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) out of seven contiguous amino acids that appear in an extracellular or transmembrane region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relative positions as they appear in the extracellular or transmembrane region of the IL-IR or IL-lRacP protein.
- at least three e.g., at least four, at least five, or at least six
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) out of seven contiguous amino acids that appear in an extracellular or transmembrane region of the IL-IR or IL-lRacP protein, wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular or transmembrane region of the IL-IR or IL-lRacP protein.
- at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular or transmembrane region of the IL-IR or IL-lRacP protein.
- the one or more lactams and/or Bab residues replace one or more amino acids of the seven contiguous amino acids. In some embodiments, the one or more lactams and/or Bab residues are inserted at the N-terminus, C-terminus, or internally.
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, at least six) amino acids from any one of SEQ ID NOS:3-40, wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relevant positions as they appear in the corresponding sequence.
- the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) amino acids from RYTVELA (SEQ ID NO: 12), wherein the at least three (e.g., at least four, at least five, or at least six) amino aicds maintain their relevant positions as they appear in RYTVELA (SEQ ID NO: 12).
- one or more lactams and/or Bab residues replace one or more amino acids of RYTVELA (SEQ ID NO: 12).
- the one or more lactams are inserted at the N-terminus, C-terminus, or internally.
- Psych. 14:821- 827 (1990) (amino-gamma-lactam analogs of the Pro-Gly-Leu-NHe sequence for D2 dopamine receptor modulation); United States Publication No. 2006/0229240 (parathyroid hormone (PTH) derivatives containing lactam bridges); United States Publication No. 2009/0209491 (lactam-containing inhibitors of post-pro line cleaving enzymes (PPCE)); Gomez et al, Bioorg. Med. Chem. Lett. 19:1733-1736 (2009) (lactam-containing peptidomimetic inhibitors of STAT3).
- PTH parathyroid hormone
- PPCE post-pro line cleaving enzymes
- IL-IR antagonistic peptide 101.10 RYTVELA similar methods can be used to introduce various lactams and/or Bab residues into any one of the peptides described herein (e.g., peptides having an amino acid sequence as shown in Tables 1 and 2) or variants thereof.
- variants of a peptide include peptides that have an amino acid sequence at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, identical to the sequence of the parent peptide.
- variants of peptides as shown in Tables 1 and 2 include peptides having at least three, four, five, six, or seven amino acids from any one of peptides as shown in Tables 1 and 2 (e.g., SEQ ID NOs: 3 -60), wherein the at least three, four, five, six, or seven amino acids maintain their relative positions and/or spacing as they appear in the corresponding parent peptide.
- the biological activity of peptidomimetics synthesized according to the invention can be tested using various functional assays known in the art and as described herein.
- the lactam peptidomimetics synthesized according to the invention can be tested for its ability to inhibit or enhance the activity of the IL-I receptor using various IL- 1 functional assays (e.g., thymocyte TF-I proliferation assay). Exemplary methods are described in the Examples section. Additional assays are described in U.S. Application Publication No. US 2006/0094663, entitled "Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment," the entire disclosure of which is hereby incorporated by reference.
- the present invention further relates to methods of improving the biological activity of a peptide by imposing conformational constraints.
- the methods according to the invention include introducing a lactam and/or Bab residue replacement or insertion into a peptide such that the lactam/Bab structure locks the secondary structure of a peptide in a bioactive conformation.
- a lactam/Bab residue is introduced at N-terminus (also referred to as position 1 from the N-terminus) of a peptide.
- a lactam/Bab residue is introduced at position 2, 3, 4, 5, 6, 7, 8 or 9, from the N-terminus of the peptide.
- the methods include a step of testing the activity of modified peptide as compared to a control to identify modified peptides that have improved biological activity (e.g., the IL-IR antagonistic or agonistic activity).
- modified peptides that have improved biological activity (e.g., the IL-IR antagonistic or agonistic activity).
- the unmodified parent peptide is used as the control.
- a modified peptide according to the invention has 2-fold, 2.5 -fold, 3- fold, 3.5-fold, 4-fold, 4.5-fold, 5-fold, 5.5-fold, 6-fold, 6.5-fold, 7-fold, 7.5-fold, 8-fold, 8.5- fold, 9-fold, 9.5-fold, or 10-fold increased IL-IR modulatory (e.g., antagonistic or agonistic) activity as compared to a control (e.g., an unmodified parent peptide).
- IL-IR modulatory e.g., antagonistic or agonistic
- RP-HPLC % at 214 nm of the crude mixture of parent lactam peptide. 0 RP-HPLC purity at 214 nm of the purified peptide d Yields after purification by RP-HPLC are based on Fmoc loading test for Rink resin.
- Peptides (including the peptide portions of peptidomimetics) of the present invention are obtained by any method of peptide synthesis known to those skilled in the art, including synthetic (e.g., exclusive solid phase synthesis, partial solid phase synthesis, fragment condensation, classical solution synthesis) and recombinant techniques.
- the peptides or peptide derivatives can be obtained by solid phase peptide synthesis, which in brief, consists of coupling the carboxyl group of the C-terminal amino acid to a resin (e.g., benzhydrylamine resin, chloromethylated resin, hydroxymethyl resin) and successively adding N-alpha protected amino acids.
- the protecting groups maybe any such groups known in the art.
- any process of the preparation of a compound of the present invention it may desirable to protect sensitive reactive groups on any of the molecule concerned. This may be achieved by means of conventional protecting groups such as those described in Protective Groups In Organic Synthesis by T.W. Greene & P. G. M. Wuts, 1991, John Wiley and Sons, New- York; and Peptides: chemistry and Biology by Sewald and Jakubke, 2002, Wiley- VCH, Wheinheim p.142.
- alpha amino protecting groups include acyl type protecting groups (e.g., trifluoroacetyl, formyl, acetyl), aliphatic urethane protecting groups (e.g., t-butyloxycarbonyl (BOC), cyclohexyloxycarbonyl), aromatic urethane type protecting groups (e.g., fluorenyl-9-methoxy-carbonyl (Fmoc), benzyloxycarbonyl (Cbz), Cbz derivatives) and alkyl type protecting groups (e.g., triphenyl methyl, benzyl).
- acyl type protecting groups e.g., trifluoroacetyl, formyl, acetyl
- aliphatic urethane protecting groups e.g., t-butyloxycarbonyl (BOC), cyclohexyloxycarbonyl
- aromatic urethane type protecting groups e.g., fluorenyl-9
- the amino acids side chain protecting groups include benzyl (For Thr and Ser), Cbz (Tyr, Thr, Ser, Arg, Lys), methyl ethyl, cyclohexyl (Asp, His), Boc (Arg, His, Cys) etc.
- the protecting groups may be removed at a convenient subsequent stage using methods known in the art.
- the peptides of this invention may generally be synthesized according to the FMOC protocol in an organic phase with protective groups. They can be purified with a yield of 70% with HPLC on a C18 column and eluted with an acetonitrile gradient of 10-60%. Their molecular weight can then be verified by mass spectrometry (Reviewed in Fields, G.B. "Solid-Phase Peptide Synthesis". Methods in Enzymology. Vol. 289, Academic Press, 1997).
- peptides of this invention that consist of genetically encoded amino acids may be prepared in recombinant systems using polynucleotide sequences encoding the peptides. It is understood that a peptide of this invention may contain more than one of the above-described modifications within the same peptide.
- Purification of the synthesized peptide or peptide derivatives is carried out by standard methods, including chromatography (e.g., ion exchange, size exclusion, affinity), centrifugation, precipitation or any standard technique for the purification of peptides and peptide derivatives.
- chromatography e.g., ion exchange, size exclusion, affinity
- centrifugation e.g., centrifugation
- precipitation e.g., a standard technique for the purification of peptides and peptide derivatives.
- thin-layered chromatography is employed.
- reverse phase HPLC is employed.
- Other purification techniques well known in the art and suitable for peptide isolation and purification may be used in the present invention.
- the processes for the preparation of the compounds according to the present invention give rise to mixtures of stereoisomers
- these isomers may be separated by conventional techniques such as preparative chromatography.
- the compounds may be prepared in racemic form, or individual enantiomers may be prepared either by enantiospecific synthesis or by resolution.
- the compounds may, for example, be resolved into their components enantiomers by standard techniques such as the formation of diastereoisomeric pairs by salt formation with an optically active acid followed by fractional crystallization and regeneration of the free base.
- the compounds may also be resolved by formation of diastereomeric esters or amides, followed by removal of the chiral auxiliary. Alternatively, the compounds may be resolved using chiral HPLC column. Further peptidomimetic modifications
- Peptide mimetics that are structurally related to therapeutically useful peptides may be used to produce an equivalent or enhanced therapeutic or prophylactic effect.
- Such peptide mimetics may have significant advantages over natural polypeptides including more economical production, greater chemical stability, enhanced pharmacological properties (e.g., half-life, absorption, potency, efficiency etc), reduced antigenicity and others.
- peptides While peptides are effective in inhibiting wild-type IL-I in vitro, their effectiveness in vivo might be compromised by the presence of proteases. Serum proteases have specific substrate requirements. The substrate must have both L-amino acids and peptide bonds for cleavage. Furthermore, exopeptidases, which represent the most prominent component of the protease activity in serum, usually act on the first peptide bond of the peptide and require a free N-terminus (Powell et al. 1993). In light of this, it is often advantageous to utilize modified versions of peptides also termed peptide analogs or derivatives. The modified peptides retain the structural characteristics of the original L- amino acid peptides that confer biological activity with regard to IL-I, but are advantageously not readily susceptible to cleavage by protease and/or exopeptidases.
- a peptide derivative or peptidomimetic of the present invention may be all L, all D or mixed D, L peptide.
- peptides or peptidomimetics contain all D-amino acids.
- peptides or peptidomimetics contain a D-amino acid at N-terminus or C-terminus.
- Reverse-D peptides are peptides containing D-amino acids, arranged in a reverse sequence relative to a peptide containing L-amino acids.
- the C-terminal residue of an L-amino acid peptide becomes N-terminal for the D-amino acid peptide, and so forth. It is thought that a reverse D-peptide retains the same tertiary conformation and therefore the same activity, as the corresponding L-amino acid peptide, but is more stable to enzymatic degradation in vitro and in vivo, and thus have greater therapeutic efficacy than the original peptide.
- constrained peptides comprising a consensus sequence or a substantially identical consensus sequence variation may be generated by methods well known in the art (Rizo et Gierasch, Ann. Rev. Biochem., 1992., 61 : 387), for example, by adding cysteine residues capable of forming disulfide bridges which cyclize the peptide. Cyclic peptides have no free N- or C -termini.
- a cyclic derivative containing intramolecular disulfide bond may be prepared by conventional solid phase synthesis while incorporating suitable S-protected cysteine or homocysteine residues at the positions selected for cyclization such as the amino and carboxy termini (SahM et al, 1996., J. Pharm. Pharmacol. 48: 197).
- cyclization can be performed either (1) by selective removal of the S- protecting group with a consequent on-support oxidation of the corresponding two free SH- functions, to form a S-S bonds, followed by conventional removal of the product from the support and appropriate purification procedure; or (2) by removal of the peptide from the support along with complete side chain deprotection, followed by oxidation of the free SH- functions in highly dilute aqueous solution.
- a cyclic derivative containing an intramolecular amide bond may be prepared by conventional solid phase synthesis while incorporating suitable amino and carboxyl side chain protected amino acid derivatives, at the position selected for cyclization.
- the cyclic derivatives containing intramolecular -S-alkyl bonds can be prepared by conventional solid phases while incorporating an amino acid residue with a suitable amino-protected side chain, and a suitable S-protected cysteine or homocysteine residue at the position selected for cyclization.
- Substitution of unnatural amino acids for natural amino acids in a subsequence of the peptides can also confer resistance to proteolysis. Such a substitution can, for instance, confer resistance to proteolysis by exopeptidases acting on the N-terminus. Such substitutions have been described and these substitutions do not affect biological activity. Examples of non-naturally occurring amino acids include ⁇ , ⁇ -disubstituted amino acids, N-alkyl amino acids, lactic acids, C- ⁇ -methyl amino acids, and ⁇ -methyl amino acids.
- Amino acids analogs useful in the present invention may include but are not limited to ⁇ -alanine, norvaline, norleucine, 4-aminobutyric acid, orithine, hydroxyproline, sarcosine, citrulline, cysteic acid, cyclohexylalanine, 2-aminoisobutyric acid, 6-aminohexanoic acid, t-butylglycine, phenylglycine, o-phosphoserine, N-acetyl serine, N-formylmethionine, 3-methylhistidine and other unconventional amino acids. Furthermore, the synthesis of peptides with unnatural amino acids is routine and known in the art.
- N-terminal or C-terminal residues of a peptide is to add chemical groups at the peptide termini, such that the modified peptide is no longer a substrate for the peptidase.
- One such chemical modification is glycosylation of the peptides at either or both termini.
- Certain chemical modifications, in particular N-terminal glycosylation have been shown to increase the stability of peptides in human serum (Powell et al. 1993).
- Other chemical modifications which enhance serum stability include, but are not limited to, the addition of an N-terminal alkyl group, consisting of a lower alkyl of from 1 to 20 carbons, such as an acetyl group, and/or the addition of a C-terminal amide or substituted amide group.
- the present invention includes modified peptides consisting of peptides bearing an N-terminal acetyl group and/or a C-terminal amide group.
- peptide derivatives containing additional chemical moieties not normally part of the peptide, provided that the derivative retains the desired functional activity of the peptide.
- examples of such derivatives include (i) N-acyl derivatives of the amino terminal or of another free amino group, wherein the acyl group may be an alkanoyl group (e.g., acetyl, hexanoyl, octanoyl), an aroyl group (e.g., benzoyl) or a blocking group such as Fmoc (fluorenylmethyl-O-CO-); (ii) esters of the carboxy terminal or of another free carboxy or hydroxyl group; (iii) amide of the carboxyterminal or of another free carboxyl group produced by reaction with ammonia or with a suitable amine; (iv) phosphorylated derivatives; (v) derivatives conjugated to an antibody or other biological ligand and other types of derivatives
- peptide sequences which result from the addition of extra amino acid residues to the peptides of the invention are encompassed by the present invention.
- Other derivatives included in the present invention are dual peptides consisting of two of the same, or two different peptides of the present invention covalently linked to one another either directly or through a spacer, such as by a short stretch of alanine residues or by a putative site for proteolysis (e.g., by cathepsin, see US Patent No. 5,126,249 and European Patent No. 495,049).
- Multimers of the peptides of the present invention consist of polymer of molecules formed from the same or different peptides or derivatives thereof.
- the peptide derivatives of the present invention are chimeric or fusion proteins comprising a peptide of the present invention or fragment thereof linked at its amino or carboxy terminal end, or both, to an amino acid sequence of a different protein.
- a chimeric or fusion protein may be produced by recombinant expression of a nucleic acid encoding the protein.
- such a chimeric or fusion protein contains at least 6 amino acids of a peptide of the present invention and has a functional activity equivalent or greater than that of a peptide of the invention.
- Peptide derivatives of the present invention can be made by altering the amino acid sequences by substitutions, additions or deletions that provide for functionally equivalent molecules, or functionally enhanced or diminished molecules, as desired.
- the derivative of the present invention include, but are not limited to those containing, as primary amino acid sequence, all or part of the amino acid sequence of the peptides of the present invention including altered sequences in which functionally equivalent amino acid residues are substituted for an equivalent in the sequence.
- one or more amino acid residues within the sequence can be substituted by another amino acid of a similar polarity, which act as a functional equivalent, resulting in a silent alteration.
- Substitution for an amino acid within the sequence may be selected from other members of the class to which the amino acid belongs.
- the positively charged (basic) amino acids include, arginine, lysine and histidine.
- the nonpolar (hydrophobic) amino acids include, leucine, isoleucine, alanine, phenylalanine, valine, proline, tryptophan and methionine.
- the uncharged polar amino acids include serine, threonine, cysteine, tyrosine, asparagine and glutamine.
- the negatively charged (acid) amino acids include glutamic acid and aspartic acid.
- the amino acid glycine is sometimes included in the nonpolar amino acids family and sometimes in the uncharged (neutral) polar amino acids family. Substitutions that are done within a family of amino acids are generally understood to be conservative substitutions.
- a peptidomimetic of the present invention may be isolated and purified by any number of standard methods including but not limited to differential solubility (i.e., precipitation), centrifugation, chromatography (affinity, ion exchange, size exclusion and the like) or by any other standard techniques used for the purification of peptides, peptidomimetics or proteins.
- the functional properties of an identified peptide of interest may be evaluated using any functional assay known in the art. In one embodiment assays for evaluating downstream receptor function in intracellular signaling are used (e.g., PGE 2 synthesis).
- peptidomimetic compounds of the present invention are obtained with the following three-phase process: 1) scanning the peptides of the present invention to identify regions of secondary structure involved in the binding of the IL-I receptor; 2) using conformational ⁇ constrained dipeptide surrogates to refine the backbone geometry and provide organic platforms corresponding to these surrogates; and 3) using the best organic platforms to display organic pharmocophores in libraries of candidates designed to mimic the desired activity of the native peptide.
- the three phases are as follows. In phase 1, the peptide leads are scanned and their structure abridged to identify the requirements for their activity. A series of peptide analogs of the original are synthesized.
- phase 2 the best peptide analogs are investigated using the conformationally constrained dipeptide surrogates.
- Indolizidin-2-one, indolizidin-9-one and quinolizidinone amino acids (I 2 aa, I 9 aa and Qaa respectively) are used as platforms for studying backbone geometry of the best peptide candidates.
- These and related platforms Reviewed in Halab, Li; Gosselin, F; Lubell, WD; Biopolymers (Peptide Science) VoI 55, 101-122. 2000; Hanessian, S.J. McNaughton-Smith G; Lombart, H-G.; Lubell ,W.D. Tetrahedron Vol.
- phase 3 the platforms from the most active leads are used to display organic surrogates of the pharmacophores responsible for activity of the native peptide.
- the pharmacophores and scaffolds are combined in a parallel synthesis format. Derivation of peptides and the different phases can be done by other means and methods known in the art.
- Structure function relationships determined from peptidomimetics of the present invention may be used to refine and prepare analogous molecular structures having similar or better properties.
- Peptidomimetics of the present invention are functionally active (i.e., capable of exhibiting one or more of the identified functional activities associated with a peptide of the present invention).
- peptides, peptide derivatives, peptidomimetics or analogs that inhibit a desired property e.g., binding of the IL-lRacP to a protein partner or ligand
- a desired property e.g., binding of the IL-lRacP to a protein partner or ligand
- Peptides, derivatives, peptidomimetics or analogs of the peptides of the present invention can be tested for the inhibition of cell signaling through the IL-lR/IL-lRacP receptor by any functional assay known in the art (e.g., PGE 2 synthesis).
- IL-I receptor activity are presented herein. It will be understood that the invention is not so limited. Indeed, other assays well known in the art can be used in order to identify noncompetitive, extracellular agonists or antagonists of the present invention.
- screens of an IL-lR/IL-lRacP antagonist or agonist may be based on assays that measure a biological activity of IL-lR/IL-lRacP.
- Assays of the present invention employ either a natural or recombinant IL-I receptor.
- a cell fraction or cell free screening assays for antagonists of IL-I activity can use in situ purified, or purified recombinant IL-I receptor.
- Cell-based assays can employ cells which express IL-I receptor naturally, or which contain recombinant IL-I receptor. In all cases, the biological activity of IL-I receptor can be directly or indirectly measured; thus inhibitors or activators of IL-I receptor activity can be identified.
- an assay is a cell-based assay in which a cell which expresses a IL-lR/IL-lRacP receptor complex or biologically active portion thereof, either natural or recombinant in origin, is contacted with a test compound, and the ability of the test compound to modulate IL-lR/IL-lRacP receptor biological activity, e.g., modulation of PGE 2 production, proliferation assays, binding of IL-IR to a binding partner (IL-lRacP) or any other measurable biological activity of the IL-I receptor is determined.
- a test compound e.g., modulation of PGE 2 production, proliferation assays, binding of IL-IR to a binding partner (IL-lRacP) or any other measurable biological activity of the IL-I receptor is determined.
- determining the ability of the test compound to modulate the activity of IL-lR/IL-lRacP receptor complex can be accomplished by determining the ability of the test compound to modulate the activity of a downstream effector of an IL-lR/IL-lRacP receptor target molecule.
- the activity of the test compound on the effector molecule can be determined.
- downstream effector include interleukin receptor activated kinase (IRAK); TRAF, activation of NI-KB (e.g. p65), mutagenic activated protein kinases (MAPK).
- IRAK interleukin receptor activated kinase
- TRAF activation of NI-KB (e.g. p65), mutagenic activated protein kinases
- MAPK mutagenic activated protein kinases
- IL-lRacP or an interacting peptide or peptidomimetic of the present invention to facilitate separation of complexed from uncomplexed forms of one or both of the interacting proteins, as well as to accommodate automation of the assay.
- Binding of a test compound to IL-IR protein or interaction of IL-IR protein with a target molecule (e.g., IL-lRacP) in the presence and absence of a candidate compound can be accomplished in any vessel suitable for containing the reactants. Examples of such vessels include microtiter plates, test tubes and micro-centrifuge tubes.
- a fusion protein can be provided which adds a domain that allows one or both of the proteins to be bound to a matrix.
- glutathione-S-transferase/IL-lR fusion proteins or glutathione-S-transferase/IL-lRacP fusion proteins can be adsorbed onto glutathione sepharose beads (Sigma Chemical, St. Louis, MO), or glutathione derivatized microtiter plates, which are then combined with the test compound or the test compound and either the non-adsorbed target protein or IL-IR protein and the mixture incubated under conditions conducive to complex formation (e.g. at physiological conditions for salt and pH). Following incubation the beads or microtiter plate wells are washed to remove any unbound components, and complex formation determined either directly or indirectly, for example, as described above. Alternatively, the complexes can be dissociated from the matrix, and the level of IL-IR binding or activity determined using standard techniques.
- candidate peptides or peptidometics are tested for their ability to activate or inhibit ability of an IL-I receptor to modulate cellular proliferation with the incorporated tritiated thymidine method.
- candidate peptides are tested for their ability to inhibit ability of an IL-I receptor to modulate cellular proliferation, using for example, the assays described in (Baker et al. 1995; Cheviron, Grillon et al. 1996); (Elliott et al. 1999; Hu et al. 1999).
- candidate peptides or peptidomimetics are tested for their ability to modulate the phosphorylation state of IL-IR or portion thereof, or an upstream or downstream target protein in the IL-lR/IL-lRacP pathway, using for example an in vitro kinase assay.
- candidate peptides targeting IL-IR are tested for PGE 2 levels, IL-6 or collagenase expression or any other molecule having a level which is modified following IL-I stimulation in IL-lR/ILlRacP expressing cells, such as chondrocytes and fibroblasts.
- this invention also includes secondary IL-IR screens that may involve various assays utilizing mammalian cell lines expressing these receptors or other assays.
- Tertiary screens may involve the study of the identified inhibitors in animal models for clinical symptoms. Accordingly, it is within the scope of this invention to further use an agent (peptide or peptidomimetic) identified as described herein in an appropriate animal model such as a rat or a mouse.
- an agent peptide or peptidomimetic
- a peptide can be used in an animal model to determine the efficacy, toxicity, or side effects of treatment with such an agent.
- an agent identified as described herein can be used in an animal model to determine the mechanism of action of such an agent.
- this invention pertains to uses of novel agents identified by the above-described screening assays for treatment (e.g. treatments of different types of disorders associated with a deregulation or malfunction of IL- 1 receptor), as described herein.
- Non-limiting animal models which can be used in such assays include: collagen-induced arthritis in rat, animal model of acute IBD, tumor growth in immunosuppressed mouse, sensitization of the airways in newborn mice and any other
- the present invention relates to a method for modulating (e.g., inhibiting or activating) IL-I receptor activity through its interaction with the peptides, peptide derivatives and peptidomimetics of the present invention.
- the peptides, peptide derivatives and peptidomimetics of the present invention are useful in the treatment of IL-I related diseases, disorders or conditions.
- methods of the present invention comprise administering to a subject in need thereof or at risk of being in need thereof an effective amount of a peptide, peptide derivative or peptidomimetic, or a composition comprising a peptide, peptide derivative or peptidomimetic to a subject, to modulate (e.g., inhibit) IL-lR/RacP biological activity.
- an effective amount of a therapeutic composition comprising a peptide or peptide derivative thereof and a suitable pharmaceutical carrier is administered to a subject to inhibit IL-lR/IL-lRacP biological activity to prevent, ameliorate symptoms or treat a disorder, disease or condition related to abnormal signaling through IL-lR/IL-lRacP (e.g., overstimulation of the IL-I /IL- lRacP receptor via an overproduction of IL-I /IL-I RacP ligand or via a constitutive Iy active receptor or any other defect).
- the subject is an animal.
- the subject is a mammal, and preferably a human.
- the peptides, peptide derivatives and peptidomimetics of the present invention are used in the treatment, prophylaxis or amelioration of symptoms in any disease condition or disorder where the inhibition of IL-lR/IL-lRacP biological activity might be beneficial.
- Diseases, conditions or disorders to which the peptides, peptide derivatives or peptidomimetics of the present invention may be beneficial include, but are not limited to the following examples: chronic and acute inflammation diseases like rheumatoid arthritis, inflammatory bowel disease, septic shock, osteoarthritis, psoriasis, encephalitis, glomerulonephritis, respiratory distress syndrome and Reiter's syndrome.
- Other conditions include, systemic lupus erythematosus, scleroderma, Crohn's disease, ulcerative colitis, inflammatory joint disease, cachexia in certain leukemias, Alzheimer's disease, numerous types of cancers, diabetes mellitus (type I), pulmonary hypertension, stroke, periventricular leucopenia and meningitis.
- the present invention can also be used to treat other inflammatory diseases, disorders and conditions including, but not limited to, CNS demyelinating diseases, multiple sclerosis, acute disseminated encephalomyelitis (ADEM), idiopathic inflammatory demyelinating disease, transverse myelitis, Devic's disease, progressive multifocal leukoencephaly, Guillain-Barre syndrome, chronic inflammatory demyelinating polyneuropathy, anti-MAG neuropathy, inflammatory bowel disease, sepsis, septic shock, adult respiratory distress syndrome, pancreatitis, trauma-induced shock, asthma, bronchial asthma, allergic rhinitis, cystic fibrosis, stroke, acute bronchitis, chronic bronchitis, acute bronchiolitis, chronic bronchiolitis, gout, spondylarthropathris, ankylosing spondylitis, Reiter's syndrome, psoriatic arthropathy, enterapathric
- compositions within the scope of the present invention should contain the active agent (e.g. peptide, peptide derivative or peptidomimetic) in an amount effective to achieve the desired therapeutic effect while minimizing adverse side effects.
- the active agent e.g. peptide, peptide derivative or peptidomimetic
- Pharmaceutically acceptable preparations and salts of the active agent are within the scope of the present invention and are well known in the art.
- the amount administered should be chosen so as to minimize adverse side effects.
- the amount of the therapeutic or pharmaceutical composition which is effective in the treatment of a particular disease, disorder or condition will depend on the nature and severity of the disease, the target site of action, the patient's weight, special diets being followed by the patient, concurrent medications being used, the administration route and other factors that will be recognized by those skilled in the art.
- the dosage will be adapted by the clinician in accordance with conventional factors such as the extent of the disease and different parameters from the patient. Typically, 0.001 to 100 mg/kg/day will be administered to the subject. Effective doses may be extrapolated from dose response curves derived from in vitro or animal model test systems. For example, in order to obtain an effective mg/kg dose for humans based on data generated from rat studies, the effective mg/kg dosage in rat is divided by six.
- compositions of the present invention can be administered by any suitable route including, intravenous or intramuscular injection, intraventricular or intrathecal injection (for central nervous system administration), orally, topically, subcutaneously, subconjunctival ⁇ , or via intranasal, intradermal, sublingual, vaginal, rectal or epidural routes.
- the pharmaceutical compositions of the present invention can be delivered in a controlled release system.
- polymeric materials are used (see Smolen and Ball, Controlled Drug Bioavailability, Drug product design and performance, 1984, John Wiley & Sons; Ranade and Hollinger, Drug Delivery Systems, pharmacology and toxicology series, 2003, 2 nd edition, CRRC Press); in other embodiments, a pump is used (Saudek et al, 1989, N. Engl. J. Med. 321 : 574).
- Compounds of the present invention may also be delivered by the use of monoclonal antibodies as individual carriers to which the compound molecules are coupled.
- the compounds of the present invention may also be coupled to a class of biodegradable polymers useful in achieving controlled release of the drug, non-limiting examples, include: polylactic acid, polyorthoesters, cross-linked amphipathic block copolymers and hydrogels, polyhydroxy butyric acid and polydihydropyrans.
- compositions of the present invention comprise a peptide, peptide derivative or peptidomimetic combined with a pharmaceutically acceptable carrier.
- carrier refers to diluents, adjuvants, excipients such as a filler or a binder, a disintegrating agent, a lubricant a silica flow conditioner a stabilizing agent or vehicles with which the peptide, peptide derivative or peptidomimetic is administered.
- Such pharmaceutical carriers include sterile liquids such as water and oils including mineral oil, vegetable oil (e.g., peanut oil, soybean oil, sesame oil, canola oil), animal oil or oil of synthetic origin.
- Aqueous glycerol and dextrose solutions as well as saline solutions may also be employed as liquid carriers of the pharmaceutical compositions of the present invention.
- the choice of the carrier depends on the nature of the peptide, peptide derivative or peptidomimetic, its solubility and other physiological properties as well as the target site of delivery and application.
- carriers that can penetrate the blood brain barrier are used for treatment, prophylaxis or amelioration of symptoms of diseases or conditions (e.g. inflammation) in the central nervous system.
- suitable pharmaceutical carriers are described in Remington: The Science and Practice of Pharmacy by Alfonso R. Gennaro, 2003, 21 th edition, Mack Publishing Company.
- compositions of the present invention include absorption enhancers, pH regulators and buffers, osmolarity adjusters, preservatives, stabilizers, antioxidants, surfactants, thickeners, emollient, dispersing agents, flavoring agents, coloring agents and wetting agents.
- suitable pharmaceutical excipients include water, glucose, sucrose, lactose, glycol, ethanol, glycerol monostearate, gelatin, rice, starch flour, chalk, sodium stearate, malt, sodium chloride and the like.
- the pharmaceutical compositions of the present invention can take the form of solutions, capsules, tablets, creams, gels, powders sustained release formulations and the like.
- the composition can be formulated as a suppository, with traditional binders and carriers such as triglycerides (see Remington: The Science and Practice of Pharmacy by Alfonso R. Gennaro, 2003, 21 th edition, Mack Publishing Company).
- compositions contain a therapeutically effective amount of the therapeutic composition, together with a suitable amount of carrier so as to provide the form for proper administration to the subject.
- the formulations are designed so as to suit the mode of administration and the target site of action (e.g., a particular organ or cell type).
- compositions of the present invention can be formulated as neutral or salt forms.
- Pharmaceutically acceptable salts include those that form with free amino groups and those that react with free carboxyl groups.
- Non-toxic alkali metal, alkaline earth metal and ammonium salts commonly used in the pharmaceutical industry include sodium, potassium, lithium, calcium, magnesium, barium, ammonium, and protamine zinc salts, which are prepared by methods well known in the art.
- the term also includes non-toxic acid addition salts, which are generally prepared by reacting the compounds of the present invention with suitable organic or inorganic acid.
- Representative salts include the hydrobromide, hydrochloride, valerate, oxalate, oleate, laureate, borate, benzoate, sulfate, bisulfate, acetate, phosphate, tysolate, citrate, maleate, fumarate, tartrate, succinate, napsylate salts and the like.
- fillers or binders examples include acacia, alginic acid, calcium phosphate (dibasic), carboxymethylcellulose, carboxymethylcellulose sodium, hydroxyethylcellulose, hydroxypropylcellulose, hydroxypropylmethylcellulose, dextrin, dextrates, sucrose, tylose, pregelatinized starch, calcium sulfate, amylose, glycine, bentonite, maltose, sorbitol, ethylcellulose, disodium hydrogen phosphate, disodium phosphate, disodium pyrosulf ⁇ te, polyvinyl alcohol, gelatin, glucose, guar gum, liquid glucose, compressible sugar, magnesium aluminum silicate, maltodextrin, polyethylene oxide, polymethacrylates, povidone, sodium alginate, tragacanth micro crystalline cellulose, starch, and zein.
- disintegrating agents examples include alginic acid, carboxymethylcellulose, carboxymethylcellulose sodium, hydroxypropylcellulose (low substituted), microcrystalline cellulose, powdered cellulose, colloidal silicon dioxide, sodium croscarmellose, crospovidone, methylcellulose, polacrilin potassium, povidone, sodium alginate, sodium starch glycolate, starch, disodium disulf ⁇ te, disodium edathamil, disodium edetate, disodiumethylenediaminetetraacetate (EDTA) crosslinked polyvinylpyrollidines, pregelatinized starch, carboxymethyl starch, sodium carboxymethyl starch, microcrystalline cellulose.
- alginic acid alginic acid
- carboxymethylcellulose carboxymethylcellulose sodium, hydroxypropylcellulose (low substituted)
- microcrystalline cellulose powdered cellulose
- colloidal silicon dioxide sodium croscarmellose
- crospovidone methylcellulose
- polacrilin potassium povidone
- lubricants include calcium stearate, canola oil, glyceryl palmitostearate, hydrogenated vegetable oil (type I), magnesium oxide, magnesium stearate, mineral oil, poloxamer, polyethylene glycol, sodium lauryl sulfate, sodium stearate fumarate, stearic acid, talc and, zinc stearate, glyceryl behapate, magnesium lauryl sulfate, boric acid, sodium benzoate, sodium acetate, sodium benzoate/sodium acetate (in combination), DL- leucine.
- silica flow conditioners examples include colloidal silicon dioxide, magnesium aluminum silicate and guar gum. Another most preferred silica flow conditioner consists of silicon dioxide.
- stabilizing agents include acacia, albumin, polyvinyl alcohol, alginic acid, bentonite, dicalcium phosphate, carboxymethylcellulose, hydroxypropylcellulose, colloidal silicon dioxide, cyclodextrins, glyceryl monostearate, hydroxypropyl methylcellulose, magnesium trisilicate, magnesium aluminum silicate, propylene glycol, propylene glycol alginate, sodium alginate, carnauba wax, xanthan gum, starch, stearate(s), stearic acid, stearic monoglyceride and stearyl alcohol.
- the present invention also provides for modifications of peptides or peptide derivatives such that they are more stable once administered to a subject (i.e., once administered it has a longer half-life or longer period of effectiveness as compared to the unmodified form).
- modifications are well known to those skilled in the art to which this invention pertain (e.g., polyethylene glycol derivatization a.k.a. PEGylation, microencapsulation, etc).
- the IL-lR/IL-lRacP antagonists or agonists of the present invention may be administered alone or in combination with other active agents useful for the treatment, prophylaxis or amelioration of symptoms of a IL-I, IL-lR/IL-lRacP associated disease or condition.
- the compositions and methods of the present invention can be used in combination with other agents exhibiting the ability to modulate IL-I activity (e.g., synthesis, release and/or binding to IL-lR/IL-lRacP) or to reduce the symptoms of an IL-I associated disease (e.g., rheumatoid arthritis and inflammatory bowel disease).
- Example of such agents include but are not limited to antirheumatic drugs such as chloroquine, auranofm (RidauraTM), dexamethasone, sodium aurothiomalate, methotrexate (see Lee et ah, 1988, Proc. Int. Acad. Sci, 85:1204), probucol (see Ku et al, 1988, Am. J. Cardiol. 62:778), pentoxyfylline (e.g., Sullivan et al, 1988, Infect. Immun. 56 :1722), disulf ⁇ ram (see Marx 1988, Science, 239:257), antioxidants such as nordihydroguaiaretic acid (lee et al, 1988, Int J.
- antirheumatic drugs such as chloroquine, auranofm (RidauraTM), dexamethasone, sodium aurothiomalate, methotrexate (see Lee et ah, 1988, Proc. In
- Non Steroidal Antiinflammatory Drugs e.g., Rofecoxib (VIOXXTM), Celecoxib (CelebrexTM), Valdecoxib (BextraTM), AspirinTM, advilTM), anti TNF- ⁇ drugs (Infliximab, etanercept, adalimumab), collagenase inhibitors and others.
- NSAIDS Non Steroidal Antiinflammatory Drugs
- VIOXXTM Rofecoxib
- Celecoxib Celecoxib
- Valdecoxib BextraTM
- AspirinTM advilTM
- anti TNF- ⁇ drugs Infliximab, etanercept, adalimumab
- collagenase inhibitors e.g.
- Peptide synthesis was carried out in syringe tubes as described earlier. When the residue was reached for lactam synthesis, Fmoc deprotection was performed as usual and the resin was transferred into a 5 mL glass microwave vessel. A solution of cyclic sulfamidate (i?)-17 (5 eq.) and DIEA (1 eq.) in THF (2 mL) was added, the reactor was sealed and the mixture was irradiated under microwave at 60 0 C for 1 h.
- the resin was then transferred into a 6 mL syringe tube, washed with DMF (3 times), MeOH (3 times), DCM (3 times), and with three cycles comprising washing with 2% AcOH in DMSO for 30 min and washing with MeCN for 5 minutes.
- the resin was transferred back to a 5 mL glass microwave vessel, a DMS0:H 2 0:Ac0H 75:23:2 (2 mL) was added, the reactor sealed and the mixture was irradiated under microwave at 100 0 C for 3 h.
- the resin was transferred back into a syringe tube and underwent an acetyl-capping step by treatment with a solution of acetic anhydride (5 eq.) in DMF (4 mL) in the presence of DIEA (5 eq.) for 1.5 h.
- acetic anhydride 5 eq.
- DMF 4 mL
- DIEA 5 eq.
- GM-CSF Granulocyte Macrophage Colony Stimulating Factor, 2 ng/ml; BD Biosource.
- GM-CSF GABA-CSF
- IL- l ⁇ 10 or 25 ng/niL
- [ 3 H]thymidine (1 ⁇ Ci/mL; Amersham) was added and the cells were incubated for another 24 h.
- Amide-MBHA resin 200 mg, 0.134 mmol, 0.67 mmol/g
- DCM 7 mL
- the tube was sealed and shaken for 0.5 h.
- the resin was then filtered and taken up in freshly prepared 20% piperidine in DMF solution (7 mL), shaken for 30 min, filtered, retreated with 20% piperidine/DMF solution (7 mL) and shaken for 30 min.
- a positive Kaiser colour test indicated qualitatively the presence of free amine.
- the anhydrous resin in a 12 mL plastic filtration tube with polyethylene frit, was flushed with argon, swollen in THF (7 mL), treated with BSA (5 equiv.), shaken for 6 h, filtered under argon and treated with a solution of sulfamidate (5 equiv.) in THF (7 mL). After shaking for 18 h at room temperature, the resin was filtered and washed under argon with THF (3 x 7 mL).
- D-Sized polystyrene Rink amide lanterns with a 35- ⁇ mol loading were used for the synthesis of 93 and 94 and A-sized polystyrene Rink amide lanterns with a 75- ⁇ mol loading were used for the synthesis of 95-97.
- a 20-mL sample vials with a cover in which seven 0,3 mm diameter holes were drilled was used and solutions were removed simply by reversing the flask.
- lanterns were then dried in vacuo for at least 3 h.
- the anhydrous lanterns in 2- or 5- mL glass microwave vials, were flushed with argon, suspended in THF, treated with a solution of sulfamidate (4 equiv.) and DIEA (0- 1.1 equiv) in THF and heated in the microwave at 60-70 0 C for l-2h.
- the lanterns were washed under argon with THF.
- the alkylation with sulfamidate was preceded by a treatment with BSA (5 equiv) in THF for 1-6 h.
- a 2- or 5-mL glass microwave vial was charged with lanterns and a freshly prepared solution of DMSO/AcOH (99:1, v/v) or DMSO/H 2 O/AcOH (75:23:2, v/v/v).
- the vial was sealed, heated in the microwave at 80 0 C for 5-10 h.
- the lanterns were then washed as previously described.
- Peptide alkylation was preceded by N-silylation of the peptide amine with N,O-bis(trimethylsilyl)acetamide (BSA) to minimize bis-alkylation.
- BSA N,O-bis(trimethylsilyl)acetamide
- Lactam annulation was performed by microwave irradiation, the Fmoc group was removed and the sequence was elongated to provide the supported, protected AgI peptide 93.
- Lactam peptide 93 was obtained by side-chain deprotection and cleavage from the resin and lantern upon treatment with TFA.
- the crude peptides were analyzed by RP-HPLC and comparable crude purity was obtained using resin and lantern (33% and 32%, respectively) indicating that AgI peptide synthesis was unaffected by the support.
- the main impurities in crude material 93 were the deletion sequence from incomplete sulfamidate alkylation (30%) and uncyclized product (17%).
- the main impurity was the acetylated (5)-Agl-vela peptide (39%) probably due to an undesired partial AgI Fmoc deprotection prior to treatment with the acetic anhydride.
- the residual amine capping was performed on lantern after lactam annulation to avoid complications from a deletion sequence due to incomplete sulfamidate alkylation.
- the rytvela analog 93 was synthesized in parallel on color-tagged lanterns with the analog 94, in which the D-VaI 4 residue was replaced by (S)- AgI.
- the C- and N- terminal peptide fragments were assembled by standard SPPS protocols.
- the alkylation with sulfamidate (S)-S was performed after treatment of the peptide lanterns with BSA for 1 h, and comparable results were obtained by overnight alkylation at room temperature and heating at 60 0 C with microwave-irradiation for 1 h. Lactam annulation was accomplished in 1% AcOH in DMSO with heating at 110 0 C under microwave irradiation for 6 h, or in an oil bath for longer times.
- substrates with sterically demanding side chains such as the methyl esters of Phe, VaI and Trp, reacted well with 106.
- lower reaction temperatures mitigated losses from Fmoc deprotection.
- the nucleophilic phenol of unprotected Tyr-OMe was tolerated, however the ester-protected glutamate side competed for lactamization producing N-alkyl pyroglutamate.
- the methyl ester of aminobenzoic acid as well as the benzyl ester of beta-Ala gave respectively 58 and 67% yield.
- the stereogenic carbons in these dipeptide mimics are derived from the chiral pool with diasteroselective induction to set the 3 -hydroxy center by way of selective epoxidation of vinylglycine.
- the oxiranylglycine diasteriomers 106 were separable, allowing all possible sterioisomers to be obtained by choice of chirality in the starting material. Preparation of ⁇ -hydroxy- ⁇ -amino- ⁇ -lactam peptides on polystyrene Rink amide lantern
- the lanterns were treated with an oxiranylglycine 106 (3 equiv.) in 2,2,2-trifluoroethanol (0.06 M) and heated to 80 0 C under microwave irradiation for 12h.
- Lantern washing and subsequent elongation was done as described, providing the desired lactam peptide as the TFA salt 99 (50% crude purity by analytical RP-HPLC-MS (UV 214), 5-80% MeOH in H2O, 0.1% FA, 20 min gradient, tR 8.45 min., MS calcd. for C 38 H 62 O H N I I [M+H] + 848.4, found 848.6.).
- the hydroxylactam dipeptidyl esters may be hydrolyzed and used as dipeptide building blocks in standard peptide synthesis.
- a 12 niL plastic filtration tube with polyethylene frit was charged with Rink resin (300 mg, 0.09 mmol, 0.3 mmol/g) and DMF (7 rnL). The tube was sealed and shaken for 0.5 h. The resin was then filtered and taken up in freshly prepared 20% piperidine in DMF solution (7 mL), shaken for 30 min, filtered, retreated with 20% piperidine/DMF solution (7 mL) and shaken for 30 min. The resin was washed by successive agitations for 1 min and filtered from DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL). A positive Kaiser colour test indicated qualitatively the presence of free amine.
- reaction mixture was shaken for 8 h with Fmoc-D-Leu-OH, 12 h with Fmoc-D- GIu( 1 Bu)-OH and Fmoc-D-Gln(Trt)-OH, 18 h with Fmoc-I 2 aa-OH, 10 h with Fmoc-D- Tyr( l Bu)-OH, 11 h with Fmoc-D-Orn(Boc)-OH, HOOC(CH 2 ) 5 NH(Boc) and HOOC(CH2)4NH(Fmoc), at room temperature.
- a 2 mL glass microwave vial was charged with resin and either DMF (2 mL) or a freshly prepared 1% acetic acid/DMSO solution (2 mL).
- the vial was sealed, heated in the microwave at 100 0 C (pressure 1 bar) for 3 h and then cooled using a jet of air.
- the resin was then washed from the microwave vessel into a 12 mL plastic filtration tube with polyethylene frit and washed by shaking for 1 min with DMF (3 ⁇ 7 mL), MeOH (3 ⁇ 7 mL) and DCM (3 ⁇ 7 mL) and then dried in vacuo.
- the peptidyl resin was then transferred into a dry 2 mL microwave vessel. A solution of freshly prepared sulfamidate in THF (1.5 mL) was added under argon, followed by DIEA. The mixture was then heated under microwave irradiation at 60 0 C for 2.5 hours. The resin was washed with DCM (3 x 6 mL), MeOH (3 x 6 mL) and DCM (3 x mL).
- DMSO/H2O/AcOH 75:23:2, 2 mL.
- the vial was sealed, heated in the microwave at 100 0 C (pressure 1 bar) for 4h and then cooled using a jet of air.
- the resin was then washed from the microwave vessel into a 12 mL plastic filtration tube with polyethylene frit and washed by shaking for 1 min with DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL) and then dried in vacuo.
- the resin was first swollen in a plastic filtration tube with polyethylene frit, as described for Fmoc removal above, treated with a freshly prepared 20% piperidine / DMF solution (7 mL), shaken for 15 min, filtered, treated with a second portion of 20% piperidine/DMF solution (7 niL) and shaken for 15 min. The resin was then filtered and washed by shaking for 1 min with DMF (3 x 7 rnL), MeOH (3 x 7 rnL) and DCM (3 x 7 rnL). A positive Kaiser colour test indicated qualitatively the presence of free amine.
- the peptide was then cleaved from the resin by shaking in TFA/H 2 O/TES (7 mL, 95/2.5/2.5, v/v/v) for 2 h.
- the resin was filtered, washed with TFA (7 mL) and the combined filtrate and washings were concentrated in vacuo.
- the resulting residue was dissolved in a minimum volume of TFA ( ⁇ 1 mL), transferred to a centrifuge tube and precipitated by the addition of ice-cold diethyl ether (40 mL).
- the peptide was then centrifuged and the diethyl ether was carefully decanted from the tube.
- the treatment of the precipitated peptide with cold diethyl ether wash was repeated twice.
- the resulting white solid was dissolved in water (10 mL) and freeze-dried to give a white foam that was purified by preparatory RP-HPLC, using the specified conditions.
- D-Orn-D-Tyr-I 2 aa-D-Glu-D-Leu-NH 2 (SEQ ID NO:96) was prepared as described above to give the desired peptide TFA salt (38 mg, 71% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC115 (11.5 mg, 21%) as a white foam.
- H 2 N(CH 2 ) 4 CO-D-Tyr-raa-D-Glu-D-Leu-NH 2 (WC 116) (SEQ ID NO:97) was prepared as described above to give the desired peptide TFA salt (15 mg, 47% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 25 min gradient) to give the desired formic acid salt WC116 (5.3 mg, 10%) as a white foam.
- H 2 N(CH 2 )5CO-D-Tyr-raa-D-Glu-D-Leu-NH2 (WC 117) (SEQ ID NO:98) was prepared as described above to give the desired peptide TFA salt (23.4 mg, 44% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-30 MeCN, 20 min gradient) to give the desired formic acid salt WC117 (9.8 mg, 18%) as a white foam.
- H 2 N(CH 2 ) 4 CO-D-Tyr-raa-D-Gln-D-Leu-NH 2 (WC 125) (SEQ ID NO:99) was prepared as described above to give the desired peptide TFA salt (33.0 mg, 62% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 20 min gradient) to give the desired formic acid salt WC125 (10.7 mg, 20%) as a white foam.
- H 2 N(CH 2 ) 5 CO-D-Tyr-I 2 aa-D-Gln-D-Leu-NH 2 (WC 126) (SEQ ID NO : 100) was prepared as described above to give the desired peptide TFA salt (38.0 mg, 71% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC126 (11.0 mg, 20%) as a white foam.
- D-Orn-D-Tyr-I 2 aa-D-Gln-D-Leu-NH 2 (WC 127) (SEQ ID NO: 101) was prepared as described above to give the desired peptide TFA salt (45.0 mg, 84% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC 127 (8.7 mg, 17%) as a white foam.
- D-Agl-D-Tyr-raa-D-Glu-D-Leu-NH 2 (WC 144) (SEQ ID NO: 102) was prepared as described above to give the desired peptide TFA salt (34.0 mg, 44% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC144 (4.4 mg, 6%) as a white foam.
- Agl-D-Tyr-I 2 aa-D-Glu-D-Leu-NH 2 (WC 145) (SEQ ID NO: 103) was prepared as described above to give the desired peptide TFA salt (30.0 mg, 39% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC 145 (5.0 mg, 6%) as a white foam.
- D-Bgl-D-Tyr-I 2 aa-D-Glu-D-Leu-NH 2 (WC146) (SEQ ID NO: 104) was prepared as described above to give the desired peptide TFA salt (37.0 mg, 48% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC146 (10.5 mg, 13%) as a white foam.
- Bgl-D-Tyr-I 2 aa-D-Glu-D-Leu-NH 2 (WC 147) (SEQ ID NO: 105) was prepared as described above to give the desired peptide TFA salt (37.0 mg, 48% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC147 (9.8 mg, 13%) as a white foam.
Landscapes
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Biochemistry (AREA)
- Zoology (AREA)
- Gastroenterology & Hepatology (AREA)
- Toxicology (AREA)
- Immunology (AREA)
- Biophysics (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Medicinal Chemistry (AREA)
- Molecular Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Cell Biology (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
Abstract
The present invention provides, among other things, improved Allosteramers™ for modulating IL-I receptor activity. In particular, the present invention provides peptidomimetics containing lactams and/or Bab residues. Pharmaceutical compositions of the peptidomimetic compounds of the present invention and methods of using these compositions in the treatment of various disorders are also provided.
Description
PEPTIDOMIMETICS FOR MODULATING INTERLEUKIN-I RECEPTOR
REFERENCE TO RELATED APPLICATION
[0001] This application claims the benefit of U.S. Provisional Patent Application No.
61/162,070, filed March 20, 2009, the contents of which are hereby incorporated by reference in their entireties.
BACKGROUND OF THE INVENTION
[0002] The Interleukin-1 (IL-I) family of polypeptide hormones represents an important class of cytokines which are expressed by a variety of cell types including monocytes (which are the predominant source of IL-I), fibroblasts, endothelial cells, smooth muscle cells, osteoclasts, astrocytes, epithelial cells, T-cells, B-cells and numerous cancer cells. This family of cytokines includes more than 7 distinct but structurally related molecules including IL- lα and IL- lβ. Receptors for IL-I recognize both α and β forms and both forms have similar biological properties. The biological properties of IL-I are numerous and include mediating many immunological and inflammatory responses to infection and injury.
[0003] Two distinct receptor proteins of IL-I have been cloned and characterized: IL-
IRI (Sims, et al. 1989), which generates the biological effects of IL-I; and IL-IRII. In addition, a receptor accessory protein (IL-IRAcP), which is the putative signal-transducing subunit of the receptor complex, has been identified. Generally, one of the first events in signal transduction, following IL-I binding, is the formation of an IL-lR/IL-lRacP complex which leads to IRAK (IL-I receptor associated kinase) recruitment to the complex and to a cascade of phosphorylation by kinases, causing the activation of transcriptional factors including NFKB and AP-I. The IL-lR/IL-lRacP complex can also recruit and activate kinases like PBK and Akt and can also lead to the activation of the PLC/PKC pathway of signalization (Daun and Fenton, 2000).
[0004] Despite its normally beneficial effects on an organism response to infection and injury, actions of IL-I can be harmful in some instances. For example, inappropriate production or response to IL-I have been shown in many acute and chronic inflammatory
diseases such as rheumatoid arthritis, inflammatory bowel disease (IBD), osteoarthritis, psoriasis, septic shock, encephalitis and respiratory distress syndrome. IL-I has also been shown to play a role in several other illnesses including Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases.
[0005] Generally, Interleukin-1 (IL-I) plays a role in the regulation of inflammation by stimulating generation of inflammatory mediators like IL-6, prostaglandin E2 (PGE2; via the induction the COX-2 and PGE synthase (mPGES) expression) and itself, therefore enhancing the process of inflammation. Another biological activity of IL-I is to induce proliferation and activation of numerous cell types like T-cells (Cullinan, et al. 1998; Dunne and O'Neill 2003). IL-I may also increase the level of collagenase in an arthritic joint and has been implicated in the acute and chronic stages of immunopathology in rheumatoid arthritis. IL-I may be responsible for altering endothelial cell function, directing the chemotaxis of lymphocytes and leucocytes into synovial tissue and inducing the secretion of latent collagenase by chondrocytes and fibroblasts. IL-I is considered, along with TNF, as the prototype of inflammatory cytokines. However, the effects of IL-I are not limited to inflammation and this cytokine also plays a role in bone formation and remodeling, insulin secretion and fever induction.
[0006] As a major pro-inflammatory cytokine, IL-I is a potentially powerful target for therapeutic intervention in diseases like articular cartilage injury such as in arthritis. Osteoarthritis and rheumatoid arthritis are only second to heart disease for causing work disabilities in North America and their prevalence increase dramatically with age (Hallegua and Weisman 2002).
[0007] Current approaches for treating IL-I related diseases include the development of soluble receptors, monoclonal antibodies, mimetics of cytokines, antisense techniques and kinase inhibitors. Recently, short peptides known as Allosteramers™ that specifically target the IL-I receptor activity have been developed. See, U.S. Patent No. 7,432,341, entitled "Cytokine receptor modulators and method of modulating cytokine receptor activity," and U.S. Pub. No. 20060094663 entitled "Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment," the entire disclosure of both of which are hereby incorporated by reference.
SUMMARY OF THE INVENTION
[0008] The present invention encompasses the discovery that IL-IR modulatory peptides (e.g., IL-IR Allosteramers™) can be optimized by incorporating one or more lactams and/or Bab residues into the peptide. Thus, the present invention provides, among other things, peptidomimetics that have improved ability to modulate (e.g., inhibit or activate) IL-I receptor activity.
[0009] In one aspect, the present invention provides an IL-IR modulatory peptidomimetic comprising one or more lactams and/or Bab residues. In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP). In other embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP).
[0010] In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) amino acids from any one peptide selected from SEQ ID NO:3-40, wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in said peptide sequence. In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, five, or six) amino acids from RYTVELA (SEQ ID NO: 12) wherein the at least three (e.g., at least four, five, or six) amino acids maintain their relative positions as they appear in RYTVELA (SEQ ID NO: 12).
[0011] In some embodiments, lactams suitable for the present invention have the structure of formula (I) or (II), as defined and described herein. In some embodiments, lactams suitable for the present invention are selected from the group consisting of alpha- amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), beta-hydroxy-alpha-amino- gamma-lactam (Agl(4-OH)), and combination thereof In some embodiments, lactams suitable for the present invention contain I2aa, I9aa, or Qaa.
[0012] In some embodiments, the present invention provides a peptidomimetic modified from any one of SEQ ID NO:3-40, wherein the peptidomimetic comprises at least three (e.g., at least four, five or six) amino acids from the corresponding peptide sequence and a lactam and/or Bab residue replacement or insertion. In some embodiments, the at least three (e.g., at least four, five or six) amino acids maintain their relative positions as they appear in the corresponding peptide sequence. In some embodiments, the invention provides peptidomimetics modified from any one of peptide as shown in Tables 1 and 2 (e.g., SEQ ID NOs:3-60), wherein the modification comprises a lactam replacement or insertion. In some embodiments, a lactam suitable for the present invention is selected from the group consisting of alpha-amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), beta-hydroxy-alpha- amino-gamma-lactam (Agl(4-OH)), and combination thereof In some embodiments, a lactam suitable for the present invention contains I2aa, I9aa, or Qaa.
[0013] In some embodiments, a peptidomimetic of the present invention comprises at least one D-amino acid. In some embodiments, all of the amino acids present in a peptidomimetic of the present invention are D-amino acids.
[0014] In some embodiments, a peptidomimetic of the present invention comprises one or more modifications to increase protease resistance, serum stability and/or bioavailability, such as N- and/or C-terminal acetylation, glycosylation, biotinylation, amidation, substitution with D-amino acid or unnatural amino acid, and/or cyclization of the peptide.
[0015] In another aspect, the present invention provides a method of modifying an IL-
IR modulatory peptide (e.g., Allosteramer™). In some embodiments, a method according to the invention includes steps of: (a) providing a peptide that modulates the IL-IR activity; (b) modifying the peptide by introducing one or more lactams and/or Bab residues into the peptide; and (c) testing the IL-IR modulatory activity of the modified peptide. In some
embodiments, the peptide modulates the IL-IR activity non-competitively. In some embodiments, the peptide is a Negative Allosteric Modulator (NAM) of the IL-IR activity. In some embodiments, the peptide is a Positive Allosteric Modulator (PAM) of the IL-IR activity. In some embodiments, the peptide is both an NAM and a PAM of the IL-IR activity. In some embodiments, a method according to the invention further includes a step of identifying a modified peptide having improved ability to modulate (e.g., inhibit or activate) the IL-IR activity as compared to a control (e.g., the corresponding unmodified parent peptide).
[0016] The present invention also encompasses any IL-IR modulatory peptide and modified IL-IR modulatory peptide according to various methods described herein. In some embodiments, the invention provides a peptidomimetic having a sequence of any one of SEQ ID NO:61-105.
[0017] The invention further relates to pharmaceutical compositions containing various peptides or peptidomimetics described herein and their uses. For example, the present invention provides a method of inhibiting the activity of an IL-I receptor in a cell by contacting the cell with a peptide or peptidomimetic described herein. The present invention further provides a method of treating an IL-I related disease, disorder or condition (e.g., an inflammatory disease, disorder or condition) by administering to a subject in need of treatment a peptide or peptidomimetic described herein.
[0018] In this application, the use of "or" means "and/or" unless stated otherwise. As used in this application, the term "comprise" and variations of the term, such as "comprising" and "comprises," are not intended to exclude other additives, components, integers or steps.
[0019] Other features, objects, and advantages of the present invention are apparent in the detailed description, drawings and claims that follow. It should be understood, however, that the detailed description, the drawings, and the claims, while indicating embodiments of the present invention, are given by way of illustration only, not limitation. Various changes and modifications within the scope of the invention will become apparent to those skilled in the art.
DEFINITIONS
[0020] In order to facilitate the understanding of certain terms used in the specification and claims, a number of definitions are first provided herein below. Additional definitions of these terms and other terms are provided throughout the specification.
[0021] Unless defined otherwise, the scientific and technological terms and nomenclature used herein have the same meaning as commonly understood by a person of ordinary skill to which this invention pertains. Generally, the procedures of cell cultures, infection, molecular biology methods and the like are common methods used in the art. Such standard techniques can be found in reference manuals such as, for example, Ausubel et ah, Current Protocols in Molecular Biology, Wiley Interscience, New York, 2001; and Sambrook et al., Molecular Cloning: A Laboratory Manual, 3rd edition, Cold Spring Harbor Laboratory Press, N.Y., 2001.
[0022] In order for the present invention to be more readily understood, certain terms are first defined. Additional definitions for the following terms and other terms are set forth throughout the specification.
[0023] About or approximately: As used herein, the term "approximately" or
"about," as applied to one or more values of interest, refers to a value that is similar to a stated reference value. In certain embodiments, the term "approximately" or "about" refers to a range of values that fall within 25%, 20%, 19%, 18%, 17%, 16%, 15%, 14%, 13%, 12%, 11%, 10%, 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, 1%, or less in either direction (greater than or less than) of the stated reference value unless otherwise stated or otherwise evident from the context (except where such number would exceed 100% of a possible value). The terms "about" and "approximately" are used as equivalents.
[0024] Agonist: As used herein, the term "agonist" refers to a compound that directly or indirectly stimulates, activates or enhances a biological activity of a target protein. For example, an IL-I agonist is a compound that directly or indirectly stimulates, activates or enhances a biological activity of IL-I or IL-lR/IL-lRacP. The term "agonist" also includes potentiators of known compounds with agonist properties. In some embodiments, an agonist can be a peptide or peptidomimetic. In some embodiments, an agonist is a peptide or peptidomimetic that stimulates, activates or enhances an activity of IL-I or IL-lR/IL-lRacP without competing with a natural ligand of the IL-I receptor. Such an agonist is also referred
to as an allosteric agonist or a Positive Allosteric Modulator (PAM). In some embodiments, an IL-I agonist binds to IL-I or IL-lR/IL-lRacP without competing with the binding of a natural ligand.
[0025] Antagonist: As used herein, the term "antagonist" refers to any molecule that directly or indirectly inhibits, suppresses, inactivates and/or decreases an activity of a target protein. For example, an IL-I antagonist is a compound that directly or indirectly stimulates, activates or enhances an activity of IL-I or IL-lR/IL-lRacP. The term "antagonist" also includes potentiators of known compounds with antagonistic properties. In some embodiments, an antagonist can be a peptide or peptidomimetic. In some embodiments, an antagonist is a peptide or peptidomimetic that inhibits, suppresses, inactivates and/or decreases an activity of IL-I or IL-lR/IL-lRacP without competing with a natural ligand of the IL-I receptor. Such an antagonist is also referred to as an allosteric antagonist or a Negative Allosteric Modulator (NAM). In some embodiments, an IL-I antagonist binds to IL-I or IL-lR/IL-lRacP without competing with the binding of a natural ligand.
[0026] Amino acid: As used herein, the term "amino acid," in its broadest sense, refers to any compound and/or substance that can be incorporated into a polypeptide chain. In some embodiments, "amino acid" refers to a molecule containing both an amino group and a carboxyl group. In certain embodiments, an amino acid is an alpha amino acid. Suitable amino acids include, without limitation, natural alpha-amino acids such as L-isomers of the 20 common naturally occurring alpha-amino acids, D-isomers of naturally occurring alpha- amino acids, unnatural alpha-amino acids, natural beta-amino acids {e.g., beta-alanine), and unnatural beta-amino acids. α,α-Disubstituted amino acids, N-alkyl amino acids, lactic acid and other unconventional amino acids may also be suitable components for the peptides or peptidomimetics of the present invention. Examples of unconventional amino acids include but are not limited to citrulline, ornithine, norvaline, 4-(£)-butenyl-4(i?) -methyl-N- methylthreonine (MeBmt), N-methyl-leucine (MeLeu), aminoisobutyric acid, statine, N- methyl-alanine (MeAIa). As used herein, the twenty natural amino acids and their abbreviations follow conventional usage. However, unless specifically noted, an amino acid abbreviation should cover both L- and D-isomers.
[0027] Animal: As used herein, the term "animal" refers to any member of the animal kingdom. In some embodiments, "animal" refers to humans, at any stage of development. In some embodiments, "animal" refers to non-human animals, at any stage of
development. In certain embodiments, the non-human animal is a mammal (e.g., a rodent, a mouse, a rat, a rabbit, a monkey, a dog, a cat, a sheep, cattle, a primate, and/or a pig). In some embodiments, animals include, but are not limited to, mammals, birds, reptiles, amphibians, fish, insects, and/or worms. In some embodiments, an animal may be a transgenic animal, genetically-engineered animal, and/or a clone.
[0028] Biological activity: As used herein, the term "biological activity," when used in the context of IL-I receptor, or "IL-lR/IL-lRacP activity" or "receptor activity," refers to any detectable biological activity of IL-I or IL-lR/IL-lRacP gene or protein. It can include specific biological activity of IL-lR/IL-lRacP proteins in cell signaling. A suitable biological activity may be measured by PGE2 production, proliferation assays and changes in down stream gene and protein expression (e.g., IL-6, IL-I, COX enzymes). A suitable biological activity may also include for example, binding ability to, e.g., substrates, interacting proteins and the like. For example, measuring the effect of a test compound on its ability to inhibit or increase (e.g., modulate) IL-I response or IL-IR binding or interaction, is considered herein as measuring a biological activity of IL-IR according to the present invention. Broadly intra-or inter-molecular binding of the receptor subunits (e.g., IL-IR and IL-lRacP) in the absence vs the presence of the peptide, peptide derivative or peptidomimetic of the invention is yet another example of a biological activity according to the invention. IL-lR/IL-lRacP biological activity also includes any biochemical measurement of this receptor, conformational changes, phosphorylation status, any downstream effect of the receptor's signaling such as protein phosphorylation (or any other posttranslational modification e.g. ubiquitination, sumolylation, palmytoylation, prenylation etc), kinase effect or any other feature of the protein that can be measured with techniques known in the art. Finally, IL-lR/IL-lRacP biological activity includes a detectable change in cell architecture, cell proliferation or other cell phenotype that is modulated by the action of a ligand (i.e., IL- 1) on the predetermined receptor.
[0029] Comprising: As used in this specification and claim(s), the words
"comprising" (and any form of comprising, such as "comprise" and "comprises"), "having" (and any form of having, such as "have" and "has"), "including" (and any form of including, such as "includes" and "include") or "containing" (and any form of containing, such as "contains" and "contain") are inclusive or open-ended and do not exclude additional, un- recited elements or method steps. The use of the word "a" or "an" when used in conjunction
with the term "comprising" in the claims and/or the specification may mean "one" but it is also consistent with the meaning of "one or more," "at least one," and "one or more than one."
[0030] Control: As used herein, the term "control" has its art-understood meaning of being a standard against which results are compared. Typically, controls are used to augment integrity in experiments by isolating variables in order to make a conclusion about such variables. In some embodiments, a control is a reaction or assay that is performed simultaneously with a test reaction or assay to provide a comparator. In one experiment, the "test" (i.e., the variable being tested) is applied. In the second experiment, the "control," the variable being tested is not applied. In some embodiments, a control is a historical control (i.e., of a test or assay performed previously, or an amount or result that is previously known). In some embodiments, a control is or comprises a printed or otherwise saved record. A control may be a positive control or a negative control.
[0031] Functional: As used herein, a "functional" biological molecule is a biological molecule in a form in which it exhibits a property and/or activity by which it is characterized.
[0032] Functional derivative: As used herein, the term "functional derivative" denotes, when used in the context of a functional derivative of an amino acid sequence, refers to a molecule that shares structural similarity and retains a biological activity that is substantially similar to that of the original sequence. A functional derivative or equivalent may be a natural derivative or may be prepared synthetically. Such derivatives include amino acid sequences having substitutions, deletions, or additions of one or more amino acids, provided that the biological activity of the protein is conserved (e.g., it acts as a noncompetitive antagonist of the IL-I receptor). The substituting amino acid generally has chemico-physical properties, which are similar to that of the substituted amino acid. The similar chemico-physical properties include, similarities in charge, bulkiness, hydrophobicity, hydrophylicity and the like. The term "functional derivatives" is intended to include "segments", "variants", "analogs" or "chemical derivatives" of the subject matter of the present invention. In some embodiments, a functional derivative shares at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99% identity to the original amino acid sequence.
[0033] IL-I: Unless otherwise noted, "IL-I" refers to either or both IL-lα and IL-lβ.
The term "IL" refers to the broad family of interleukins.
[0034] Inhibiting: The terms "inhibiting," "reducing" or "prevention," or any variation of these terms, when used in the claims and/or the specification include any measurable decrease as compared to a baseline control or complete inhibition of the receptor activity to achieve a desired result. For example, a peptide is said to be inhibiting IL-I activity when a decrease in PGE2 production is measured following a treatment with the peptides, peptide derivatives or peptidomimetics of the present invention as compared to in the absence of these peptides.
[0035] In vitro: As used herein, the term "in vitro" refers to events that occur in an artificial environment, e.g., in a test tube or reaction vessel, in cell culture, etc., rather than within a multi-cellular organism.
[0036] In vivo: As used herein, the term "in vivo" refers to events that occur within a multi-cellular organism such as a non-human animal.
[0037] Inflammatory disease, disorder or condition: As used herein, the term an
"inflammatory disease, disorder or condition" refers to any disease, disorder, or condition in which the immune system abnormally activated or suppressed. In some embodiments, an inflammatory disease, disorder, or condition that can be treated according to the invention is inflammation of the upper and lower respiratory tract, for example, bronchial asthma, allergic asthma, non-allergic asthma, lymphomatous tracheobronchitis, allergic hypersensitivity or a hypersecretion condition, such as chronic bronchitis and cystic fibrosis; pulmonary fibrosis of various aetiologies (e.g., idiopathic pulmonary fibrosis), chronic obstructive pulmonary disease (COPD), sarcoidosis, allergic and non-allergic rhinitis; allergic or non-allergic urticaria; a skin-related diseases characterized by deregulated inflammation, tissue remodeling, angiogenesis, and neoplasm, a disease of the gastrointestinal tract, such as Crohn's disease, Hirschsprung's disease, diarrhea, malabsorption conditions, and inflammatory conditions; a disorder of the central and peripheral nervous system, such as depression, anxiety states, Parkinson's disease, migraine and other forms of cranial pain, strokes, emesis; a disease of the immune system, such as in the splenic and lymphatic tissues, an autoimmune disease or other immune -related diseases; a disease of the cardiovascular system, such as pulmonary edema, hypertension, atherosclerosis, pre-eclampsia, complex regional pain syndrome type 2, stroke and chronic inflammatory diseases such as arthritis, a bone-related diseases such as rheumatoid arthritis, as well as pain, chronic pain such as fibromyalgia, and other disorders in which the action of neurokinins, tachykinins or other
related substances (e.g., hemokinins) are involved in the pathogenesis, pathology, and aetiology.
[0038] Additional examples of inflammatory disorders include acne vulgaris; acute respiratory distress syndrome; Addison's disease; allergic intraocular inflammatory diseases, ANCA-associated small-vessel vasculitis; ankylosing spondylitis; atopic dermatitis; autoimmune hemolytic anemia; autoimmune hepatitis; Behcet's disease; Bell's palsy; bullous pemphigoid; cerebral ischaemia; cirrhosis; Cogan's syndrome; contact dermatitis; Cushing's syndrome; dermatomyositis; diabetes mellitus; discoid lupus erythematosus; lupus nephritis; eosinophilic fasciitis; erythema nodosum; exfoliative dermatitis; focal glomerulosclerosis; focal segmental glomerulosclerosis; segmental glomerulosclerosis; giant cell arteritis; gout; gouty arthritis; graft-versus-host disease; hand eczema; Henoch-Schonlein purpura; herpes gestationis; hirsutism; idiopathic cerato- scleritis; idiopathic thrombocytopenic purpura; immune thrombocytopenic purpura inflammatory bowel or gastrointestinal disorders, inflammatory dermatoses; lichen planus; lymphomatous tracheobronchitis; macular edema; multiple sclerosis; myasthenia gravis; myositis; nonspecific fibrosing lung disease; osteoarthritis; pancreatitis; pemphigoid gestationis; pemphigus vulgaris; periodontitis; polyarteritis nodosa; polymyalgia rheumatica; pruritus scroti; pruritis/inflammation, psoriasis; psoriatic arthritis; pulmonary histoplasmosis; relapsing polychondritis; rosacea caused by sarcoidosis; rosacea caused by scleroderma; rosacea caused by Sweet's syndrome; rosacea caused by systemic lupus erythematosus; rosacea caused by urticaria; rosacea caused by zoster-associated pain; sarcoidosis; scleroderma; septic shock syndrome; shoulder tendinitis or bursitis; Sjogren's syndrome; Still's disease; Sweet's disease; systemic lupus erythematosus; systemic sclerosis; Takayasu's arteritis; temporal arteritis; toxic epidermal necrolysis; transplant-rejection and transplant-rejection-related syndromes; tuberculosis; type-1 diabetes; ulcerative colitis; uveitis; vasculitis; and Wegener's granulomatosis. Desirably the autoimmune disorder is inflammatory bowel disease, an inflammatory skin disorder such as psoriasis, or multiple sclerosis.
[0039] Isolated: As used herein, the term "isolated" refers to a substance and/or entity that has been (1) separated from at least some of the components with which it was associated when initially produced (whether in nature and/or in an experimental setting), and/or (2) produced, prepared, and/or manufactured by the hand of man. Isolated substances and/or entities may be separated from at least about 10%, about 20%, about 30%, about 40%,
about 50%, about 60%, about 70%, about 80%, about 90%, about 95%, about 98%, about 99%, substantially 100%, or 100% of the other components with which they were initially associated. In some embodiments, isolated agents are more than about 80%, about 85%, about 90%, about 91%, about 92%, about 93%, about 94%, about 95%, about 96%, about 97%, about 98%, about 99%, substantially 100%, or 100% pure. As used herein, a substance is "pure" if it is substantially free of other components. As used herein, the term "isolated cell" refers to a cell not contained in a multi-cellular organism.
[0040] Modulator. As used herein, the term "modulator" refers to a compound that alters or elicits an activity. For example, the presence of a modulator may result in an increase or decrease in the magnitude of a certain activity compared to the magnitude of the activity in the absence of the modulator. In certain embodiments, a modulator is an inhibitor or antagonist, which decreases the magnitude of one or more activities. In certain embodiments, an inhibitor completely prevents one or more biological activities. In certain embodiments, a modulator is an activator or agonist, which increases the magnitude of at least one activity. In certain embodiments the presence of a modulator results in an activity that does not occur in the absence of the modulator. As used herein, the terms "inhibiting," "reducing," "preventing," or "antagonizing," or any variations of these terms as used herein, refer to a measurable decrease of a biological activity. In some embodiments, the decrease is a 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 95% reduction in the biological activity relative to a control. As used herein, the terms "stimulating," "increasing," or "agonizing," or any variations of these terms as used herein, refer to a measurable increase of a biological activity. In some embodiments, the increase is a 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 95% increase in the biological activity relative to a control.
[0041] Molecule: As used herein, the terms "molecule", "compound", "agent" or
"ligand" are used interchangeably and broadly to refer to natural, synthetic or semi-synthetic molecules or compounds. The term "molecule" therefore denotes for example chemicals, macromolecules, cell or tissue extracts (from plants or animals) and the like. Non-limiting examples of molecules include peptides, antibodies, carbohydrates and pharmaceutical agents. The agents can be selected and screened by a variety of means including random screening, rational selection and by rational design using for example protein or ligand modeling methods such as computer modeling. The terms "rationally selected" or "rationally designed" are meant to define compounds which have been chosen based on the
configuration of interacting domains of the present invention or on the configuration of antagonist peptides and/or peptidomimetics of the present invention. As will be understood by the person of ordinary skill, macromolecules having non-naturally occurring modifications are also within the scope of the term "molecule." For example, peptidomimetics, well known in the pharmaceutical industry and generally referred to as peptide analogs can be generated by modeling as mentioned above. Similarly, in a preferred embodiment, the polypeptides of the present invention are modified to enhance their stability. In some cases this modification enhances the biological activity of the peptide. The molecules identified in accordance with the teachings of the present invention have a therapeutic value in diseases or conditions in which the physiology or homeostasis of the cell and/or tissue is compromised by a defect in IL-I production or response. Non-limiting examples of such diseases or conditions include acute and chronic inflammatory diseases such as rheumatoid arthritis, inflammatory bowel disease (IBD), osteoarthritis, psoriasis, septic shock, encephalitis and respiratory distress syndrome, Alzheimer's disease, periventricular leukomalacia, meningitis, stroke, and a number of autoimmune diseases. It will be understood that the compounds are herein described interchangeably as "API-X" "TTI-X" or simply by the number of the compound (for example: "101.10", "API-101.10" or "TTI- 101.10").
[0042] Peptides: As used herein, the term "peptides" refers to macromolecules which comprise a multiplicity of amino or imino acids (or their equivalents) in peptide linkage. In the polypeptide or peptide notation used herein, the left-hand direction is the amino-terminal direction and the right-hand direction is the carboxy-terminal direction, in accordance with standard usage and convention. Peptides may include moieties other than amino acids (e.g., may be glycoproteins, proteoglycans, etc.) and/or may be otherwise processed or modified. Peptides may contain L-amino acids, D-amino acids, or both and may contain any of a variety of amino acid modifications or analogs known in the art. Useful modifications include, e.g., terminal acetylation, amidation, glycosylation, biotinylation, substitution with D-amino acid or unnatural amino acid, and/or cyclization of the peptide. In some embodiments, peptides may comprise natural amino acids, non-natural amino acids, synthetic amino acids, and combinations thereof. As used herein, a "short peptide" refers to any peptide containing up to 25 amino acids (e.g., up to 20, 15, 12, 10, 9, 8, 7, 6, 5, 4, or 3). In some embodiments, a short peptide contains 5-25 amino acids. As used in this application, peptides also include peptidomimetics unless indicated otherwise.
[0043] Peptidomimetic: Herein the terminologies "mimic," "mimetic," peptidomimetic" and the like are used herein interchangeably.
[0044] Pharmaceutically acceptable carrier: As used herein, the term
"pharmaceutically acceptable carrier" refers to a non-toxic carrier medium that does not destroy the pharmacological activity of the compound with which it is formulated.
[0045] Purified: As used herein, the term "purified" refers to a molecule (e.g. IL-I receptor, peptides, peptide derivatives, peptidomimetics, nucleic acids, proteins etc.) having been separated from a component of the composition in which it was originally present. Thus, for example, a "purified IL-I receptor" has been purified to a level not found in nature. A "substantially pure" molecule is a molecule that is lacking in most other components (e.g., 30, 40, 50, 60, 70, 75, 80, 85, 90, 95, 96, 97, 98, 99, 100% free of contaminants). By opposition, the term "crude" means molecules that have not been separated from the components of the original composition in which it was present. Therefore, the term "separating" or "purifying" refers to methods by which one or more components of the biological sample are removed from one or more other components of the sample. Sample components include nucleic acids in a generally aqueous solution that may include other components, such as proteins, carbohydrates, or lipids. A separating or purifying step preferably removes at least about 70% (e.g., 70, 75, 80, 85, 90, 95, 96, 97, 98, 99, 100%), more preferably at least about 90% (e.g., 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100%) and, even more preferably, at least about 95% (e.g., 95, 96, 97, 98, 99, 100%) of the other components present in the sample from the desired component. For the sake of brevity, the units (e.g. 66, 67...81, 82,...91, 92%....) have not systematically been recited but are considered, nevertheless, within the scope of the present invention.
[0046] Reverse peptide: As used herein, the term "reverse peptide" refers to peptides arranged in a reverse sequence relative to a corresponding region of the IL-IR or IL-lRacP protein. Likewise, the term "reverse-D peptide" refers herein to peptides containing D-amino acids, arranged in a reverse sequence relative to a corresponding peptide containing L-amino acids. For example, the C-terminal residue of an L-peptide becomes N-terminal for the reverse D-peptide, and so forth. Without wishing to be bound by theory, it is contemplated that reverse D-peptides may often retain the same tertiary conformation and therefore the same activity, as the L-amino acid peptides. It is also contemplated that a D-peptide may be
more stable and resistant to enzymatic degradation in vitro and in vivo. Therefore, a D- peptide may have greater therapeutic efficacy than the corresponding L-peptide.
[0047] Subject: As used herein, the term "subject" or "patient" refers to an animal, preferably a mammal, most preferably a human who is the object of treatment, observation or experiment.
[0048] Substantially: As used herein, the term "substantially" refers to the qualitative condition of exhibiting total or near-total extent or degree of a characteristic or property of interest. One of ordinary skill in the biological arts will understand that biological and chemical phenomena rarely, if ever, go to completion and/or proceed to completeness or achieve or avoid an absolute result. The term "substantially" is therefore used herein to capture the potential lack of completeness inherent in many biological and chemical phenomena.
[0049] Suffering from: An individual who is "suffering from" a disease, disorder, and/or condition has been diagnosed with or displays one or more symptoms of the disease, disorder, and/or condition.
[0050] Susceptible to: An individual who is "susceptible to" a disease, disorder, and/or condition has not been diagnosed with the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition may not exhibit symptoms of the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition will develop the disease, disorder, and/or condition. In some embodiments, an individual who is susceptible to a disease, disorder, and/or condition will not develop the disease, disorder, and/or condition.
[0051] Therapeutically effective amount: As used herein, the term "therapeutically effective amount" of a therapeutic agent means an amount that is sufficient, when administered to a subject suffering from or susceptible to a disease, disorder, and/or condition, to treat, diagnose, prevent, and/or delay the onset of the symptom(s) of the disease, disorder, and/or condition. It will be appreciated by those of ordinary skill in the art that a therapeutically effective amount is typically administered via a dosing regimen comprising at least one unit dose.
[0052] Therapeutic agent: As used herein, the phrase "therapeutic agent" refers to any agent that, when administered to a subject, has a therapeutic effect and/or elicits a desired biological and/or pharmacological effect. In some embodiments, a therapeutic agent of the invention refers to a peptide inhibitor or derivatives thereof according to the invention.
[0053] Treating: As used herein, the term "treat," "treatment," or "treating" refers to any method used to partially or completely alleviate, ameliorate, relieve, inhibit, prevent, delay onset of, reduce severity of and/or reduce incidence of one or more symptoms or features of a particular disease, disorder, and/or condition. Treatment may be administered to a subject who does not exhibit signs of a disease and/or exhibits only early signs of the disease for the purpose of decreasing the risk of developing pathology associated with the disease.
[0054] Definitions of specific functional groups and chemical terms are described in more detail below. For purposes of this invention, the chemical elements are identified in accordance with the Periodic Table of the Elements, CAS version, Handbook of Chemistry and Physics, 75th Ed., inside cover, and specific functional groups are generally defined as described therein. Additionally, general principles of organic chemistry, as well as specific functional moieties and reactivity, are described in Organic Chemistry, Thomas Sorrell, University Science Books, Sausalito, 1999; Smith and March March 's Advanced Organic Chemistry, 5th Edition, John Wiley & Sons, Inc., New York, 2001; Larock, Comprehensive Organic Transformations, VCH Publishers, Inc., New York, 1989; Carruthers, Some Modern Methods of Organic Synthesis, 3rd Edition, Cambridge University Press, Cambridge, 1987; the entire contents of each of which are incorporated herein by reference.
[0055] Unless otherwise stated, structures depicted herein are also meant to include all isomeric (e.g., enantiomeric, diastereomeric, and geometric (or conformational)) forms of the structure; for example, the R and S configurations for each asymmetric center, Z and E double bond isomers, and Z and E conformational isomers. Therefore, single stereochemical isomers as well as enantiomeric, diastereomeric, and geometric (or conformational) mixtures of the present compounds are within the scope of the invention. Unless otherwise stated, all tautomeric forms of the compounds of the invention are within the scope of the invention. Additionally, unless otherwise stated, structures depicted herein are also meant to include
compounds that differ only in the presence of one or more iso topically enriched atoms. For example, compounds having the present structures including the replacement of hydrogen by deuterium or tritium, or the replacement of a carbon by a 13C- or 14C-enriched carbon are within the scope of this invention. Such compounds are useful, for example, as analytical tools, as probes in biological assays, or as therapeutic agents in accordance with the present invention.
[0056] Where a particular enantiomer is preferred, it may, in some embodiments be provided substantially free of the corresponding enantiomer, and may also be referred to as "optically enriched." "Optically-enriched," as used herein, means that the compound is made up of a significantly greater proportion of one enantiomer. In certain embodiments the compound is made up of at least about 90% by weight of a preferred enantiomer. In other embodiments the compound is made up of at least about 95%, 98%, or 99% by weight of a preferred enantiomer. Preferred enantiomers may be isolated from racemic mixtures by any method known to those skilled in the art, including chiral high pressure liquid chromatography (HPLC) and the formation and crystallization of chiral salts or prepared by asymmetric syntheses. See, for example, Jacques et al., Enantiomers, Racemates and Resolutions (Wiley Interscience, New York, 1981); Wilen, et al., Tetrahedron 11:2125 (1977); Eliel, E. L. Stereochemistry of Carbon Compounds (McGraw-Hill, NY, 1962); Wilen, S.H. Tables of Resolving Agents and Optical Resolutions p. 268 (E.L. Eliel, Ed., Univ. of Notre Dame Press, Notre Dame, IN 1972).
[0057] Alkenyl: The term "alkenyl," as used herein, denotes a monovalent group derived from a straight- or branched-chain aliphatic moiety having at least one carbon- carbon double bond by the removal of a single hydrogen atom. In certain embodiments, alkenyl contains 2-6 carbon atoms. In certain embodiments, alkenyl contains 2-5 carbon atoms. In some embodiments, alkenyl contains 2-4 carbon atoms. In another embodiment, alkenyl contains 2-3 carbon atoms. Alkenyl groups include, for example, ethenyl ("vinyl"), propenyl ("allyl"), butenyl, l-methyl-2-buten-l-yl, and the like.
[0058] Alkyl: The term "alkyl," as used herein, refers to a monovalent saturated, straight- or branched-chain hydrocarbon radical derived from an aliphatic moiety containing between one and six carbon atoms by removal of a single hydrogen atom. In some embodiments, alkyl contains 1-5 carbon atoms. In another embodiment, alkyl contains 1-4 carbon atoms. In still other embodiments, alkyl contains 1-3 carbon atoms. In yet another
embodiment, alkyl contains 1-2 carbons. Examples of alkyl radicals include, but are not limited to, methyl, ethyl, n-propyl, isopropyl, n-butyl, iso-butyl, sec-butyl, sec-pentyl, iso- pentyl, tert-butyl, n-pentyl, neopentyl, n-hexyl, sec-hexyl, n-heptyl, n-octyl, n-decyl, n- undecyl, dodecyl, and the like.
[0059] Alkylene: The term "alkylene" refers to a bivalent alkyl group. An "alkylene chain" is a polymethylene group, i.e., -(CH2)D-, wherein n is a positive integer, preferably from 1 to 6, from 1 to 4, from 1 to 3, from 1 to 2, or from 2 to 3. A substituted alkylene chain is a polymethylene group in which one or more methylene hydrogen atoms are replaced with a substituent. Suitable substituents include those described below for a substituted aliphatic group.
[0060] Alkynyl: The term "alkynyl," as used herein, refers to a monovalent group derived from a straight- or branched-chain aliphatic moiety having at least one carbon- carbon triple bond by the removal of a single hydrogen atom. In certain embodiments, alkynyl contains 2-6 carbon atoms. In certain embodiments, alkynyl contains 2-5 carbon atoms. In some embodiments, alkynyl contains 2-4 carbon atoms. In another embodiment, alkynyl contains 2-3 carbon atoms. Representative alkynyl groups include, but are not limited to, ethynyl, 2-propynyl ("propargyl"), 1-propynyl, and the like.
[0061] Aliphatic: The term "aliphatic" or "aliphatic group", as used herein, denotes a hydrocarbon moiety that may be straight-chain (i.e., unbranched), branched, or cyclic (including fused, bridging, and spiro-fused polycyclic) and may be completely saturated or may contain one or more units of unsaturation, but which is not aromatic. Unless otherwise specified, aliphatic groups contain 1-6 carbon atoms. In some embodiments, aliphatic groups contain 1-4 carbon atoms, and in yet other embodiments aliphatic groups contain 1-3 carbon atoms. Suitable aliphatic groups include, but are not limited to, linear or branched, alkyl, alkenyl, and alkynyl groups, and hybrids thereof such as (cycloalkyl)alkyl, (cycloalkenyl)alkyl or (cycloalkyl)alkenyl.
[0062] Aryl: The term "aryl" used alone or as part of a larger moiety as in "aralkyl",
"aralkoxy", or "aryloxyalkyl", refers to monocyclic and bicyclic ring systems having a total of five to 10 ring members, wherein at least one ring in the system is aromatic and wherein each ring in the system contains three to seven ring members. The term "aryl" may be used interchangeably with the term "aryl ring". In certain embodiments of the present invention,
"aryl" refers to an aromatic ring system which includes, but not limited to, phenyl, biphenyl, naphthyl, anthracyl and the like, which may bear one or more substituents. Also included within the scope of the term aryl", as it is used herein, is a group in which an aromatic ring is fused to one or more non-aromatic rings, such as indanyl, phthalimidyl, naphthimidyl, phenantriidinyl, or tetrahydronaphthyl, and the like.
[0063] Cycloalkylene: As used herein, the term "cycloalkylene" refers to a bivalent cycloalkyl group. In certain embodiments, a cycloalkylene group is a 1,1 -cycloalkylene
group (i.e., a spiro-fused ring). Exemplary 1,1 -cycloalkylene groups include L — ^ . In other embodiments, a cycloalkylene group is a 1 ,2-cycloalkylene group or a 1,3-
[0064] Cycloaliphatic: The terms "cycloaliphatic", "carbocycle", "carbocyclyl",
"carbocyclo", or "carbocyclic", used alone or as part of a larger moiety, refer to a saturated or partially unsaturated cyclic aliphatic monocyclic or bicyclic ring systems, as described herein, having from 3 to 10 members, wherein the aliphatic ring system is optionally substituted as defined above and described herein. Cycloaliphatic groups include, without limitation, cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cycloheptyl, cycloheptenyl, cyclooctyl, cyclooctenyl, and cyclooctadienyl. In some embodiments, the cycloalkyl has 3-6 carbons. The terms "cycloaliphatic", "carbocycle", "carbocyclyl", "carbocyclo", or "carbocyclic" also include aliphatic rings that are fused to one or more aromatic or nonaromatic rings, such as decahydronaphthyl, tetrahydronaphthyl, decalin, or bicyclo[2.2.2]octane, where the radical or point of attachment is on an aliphatic ring.
[0065] Halogen: The terms "halo" and "halogen" as used herein refer to an atom selected from fluorine (fluoro, -F), chlorine (chloro, -Cl), bromine (bromo, -Br), and iodine (iodo, -I).
[0066] Heteroaryl: The terms "heteroaryl" and "heteroar-", used alone or as part of a larger moiety, e.g., "heteroaralkyl", or "heteroaralkoxy", refer to groups having 5 to 10 ring atoms, preferably 5, 6, or 9 ring atoms; having 6, 10, or 14 π electrons shared in a cyclic array; and having, in addition to carbon atoms, from one to five heteroatoms. The term "heteroatom" refers to nitrogen, oxygen, or sulfur, and includes any oxidized form of nitrogen or sulfur, and any quaternized form of a basic nitrogen. Heteroaryl groups include, without limitation, thienyl, furanyl, pyrrolyl, imidazolyl, pyrazolyl, triazolyl, tetrazolyl, oxazolyl, isoxazolyl, oxadiazolyl, thiazolyl, isothiazolyl, thiadiazolyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, indolizinyl, purinyl, naphthyridinyl, and pteridinyl. The terms "heteroaryl" and "heteroar-", as used herein, also include groups in which a heteroaromatic ring is fused to one or more aryl, cycloaliphatic, or heterocyclyl rings, where the radical or point of attachment is on the heteroaromatic ring. Nonlimiting examples include indolyl, isoindolyl, benzothienyl, benzofuranyl, dibenzofuranyl, indazolyl, benzimidazolyl, benzthiazolyl, quinolyl, isoquinolyl, cinnolinyl, phthalazinyl, quinazolinyl, quinoxalinyl, 4H- quinolizinyl, carbazolyl, acridinyl, phenazinyl, phenothiazinyl, phenoxazinyl, tetrahydroquinolinyl, tetrahydroisoquinolinyl, and pyrido[2,3-b]-l,4-oxazin-3(4Η)-one. A heteroaryl group may be mono- or bicyclic. The term "heteroaryl" may be used interchangeably with the terms "heteroaryl ring", "heteroaryl group", or "heteroaromatic", any of which terms include rings that are optionally substituted. The term "heteroaralkyl" refers to an alkyl group substituted by a heteroaryl, wherein the alkyl and heteroaryl portions independently are optionally substituted.
[0067] Heteroatom: The term "heteroatom" means one or more of oxygen, sulfur, nitrogen, phosphorus, or silicon (including, any oxidized form of nitrogen, sulfur, phosphorus, or silicon; the quaternized form of any basic nitrogen or; a substitutable nitrogen of a heterocyclic ring, for example N (as in 3,4-dihydro-2H-pyrrolyl), NH (as in pyrrolidinyl) or NR+ (as in N-substituted pyrrolidinyl)).
[0068] Heterocycle: As used herein, the terms "heterocycle", "heterocyclyl",
"heterocyclic radical", and "heterocyclic ring" are used interchangeably and refer to a stable 4- to 7-membered monocyclic or 7-10-membered bicyclic heterocyclic moiety that is either saturated or partially unsaturated, and having, in addition to carbon atoms, one or more, preferably one to four, heteroatoms, as defined above. When used in reference to a ring atom of a heterocycle, the term "nitrogen" includes a substituted nitrogen. As an example, in a
saturated or partially unsaturated ring having 0-3 heteroatoms selected from oxygen, sulfur or nitrogen, the nitrogen may be N (as in 3,4-dihydro-2H-pyrrolyl), NH (as in pyrrolidinyl), or +NR (as in N- substituted pyrrolidinyl).
[0069] A heterocyclic ring can be attached to its pendant group at any heteroatom or carbon atom that results in a stable structure and any of the ring atoms can be optionally substituted. Examples of such saturated or partially unsaturated heterocyclic radicals include, without limitation, tetrahydrofuranyl, tetrahydrothienyl, pyrrolidinyl, pyrrolidonyl, piperidinyl, pyrrolinyl, tetrahydroquinolinyl, tetrahydroisoquinolinyl, decahydroquinolinyl, oxazolidinyl, piperazinyl, dioxanyl, dioxolanyl, diazepinyl, oxazepinyl, thiazepinyl, morpholinyl, and quinuclidinyl. The terms "heterocycle", "heterocyclyl", "heterocyclyl ring", "heterocyclic group", "heterocyclic moiety", and "heterocyclic radical", are used interchangeably herein, and also include groups in which a heterocyclyl ring is fused to one or more aryl, heteroaryl, or cycloaliphatic rings, such as indolinyl, 3H-indolyl, chromanyl, phenanthridinyl, 2-azabicyclo[2.2.1]heptanyl, octahydroindolyl, or tetrahydroquinolinyl, where the radical or point of attachment is on the heterocyclyl ring. A heterocyclyl group may be mono- or bicyclic. The term "heterocyclylalkyl" refers to an alkyl group substituted by a heterocyclyl, wherein the alkyl and heterocyclyl portions independently are optionally substituted.
[0070] Optionally substituted: As described herein, compounds of the invention may contain "optionally substituted" moieties. In general, the term "substituted", whether preceded by the term "optionally" or not, means that one or more hydrogens of the designated moiety are replaced with a suitable substituent. Unless otherwise indicated, an "optionally substituted" group may have a suitable substituent at each substitutable position of the group, and when more than one position in any given structure may be substituted with more than one substituent selected from a specified group, the substituent may be either the same or different at each position. Combinations of substituents envisioned under this invention are preferably those that result in the formation of stable or chemically feasible compounds. The term "stable", as used herein, refers to compounds that are not substantially altered when subjected to conditions to allow for their production, detection, and, in certain embodiments, their recovery, purification, and use for one or more of the purposes disclosed herein.
[0071] Suitable monovalent substituents on a substitutable carbon atom of an
"optionally substituted" group are independently halogen; -(CH2)(MtR0;
-O-
(CH2)o-4C(0)OR0; -(CH2)o^CH(OR0)2; -(CH2V4SR0; -(CH2)0 4Ph, which may be substituted with R°; -(CH2)0-40(CH2)o-iPh which may be substituted with R°; -CH=CHPh, which may be substituted with R°; -NO2; -CN; -N3; -(CH2)o-4N(R0)2; -(CH2)0-4N(Ro)C(O)Ro; -N(R°)C(S)R°; -(CH2)o^N(R0)C(0)NR0 2; -N(R°)C(S)NR°2; -(CH2)0^N(Ro)C(O)ORo; -N(R°)N(R°)C(O)R°; -N(R°)N(R°)C(O)NR°2; -N(R°)N(R°)C(O)OR°; -(CH2)0 4C(O)R°; -C(S)R0; -(CH2)o 4C(O)OR°; -(CH2)0^C(O)SR°; -(CH2)0^C(O)OSiR°3; -(CH2)0 4OC(O)R°; - OC(0)(CH2)o-4SR-, SC(S)SR0;
-(CH2)0 4C(O)NR°2; -C(S)NR°2; - C(S)SR0; -SC(S)SR0, -(CH2)0 4OC(O)NR°2; -C(O)N(OR°)R°; -C(O)C(O)R0; -C(O)CH2C(O)R0; -C(NOR°)R°; -(CH2)0^SSR°; -(CH2)0^S(O)2R°; -(CH2)0^S(O)2OR°;
-S(O)2NR°2; -(CH2)0 4S(O)R°; -N(R°)S(O)2NR°2; -N(R°)S(O)2R°; -N(OR°)R°; -C(NH)NR°2; -P(O)2R0; -P(O)R°2; -OP(O)R°2; -OP(O)(OR°)2; -SiR°3; -(CL4 straight or branched alkylene)O-N(R°)2; or -(Ci_4 straight or branched alkylene)C(O)O-N(R°)2, wherein each R0 may be substituted as defined below and is independently hydrogen, Ci_6 aliphatic, -CH2Ph, -O(CH2)0 iPh, or a 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the definition above, two independent occurrences of R0, taken together with their intervening atom(s), form a 3-12-membered saturated, partially unsaturated, or aryl mono- or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, which may be substituted as defined below.
[0072] Suitable monovalent substituents on R0 (or the ring formed by taking two independent occurrences of R0 together with their intervening atoms), are independently halogen, -(CH2)0 2R*, -(haloR*), -(CH2)0 2OH, -(CH2)0 2OR*, -(CH2)0 2CH(OR*)2; -O(haloR'), -CN, -N3, -(CH2)0 2C(O)R*, -(CH2)0 2C(O)OH, -(CH2)0 2C(O)OR*, -(CH2)0. 2SR*, -(CH2)o-2SH, -(CH2)o 2NH2, -(CH2)0-2NHR*, -(CH2)0 2NR*2, -NO2, -SiR*3, -OSiR*3, -C(O)SR*, -(C1-4 straight or branched alkylene)C(O)OR*, or -SSR* wherein each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently selected from C1^t aliphatic, -CH2Ph, -0(CH2)o-iPh, or a 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. Suitable divalent substituents on a saturated carbon atom of R0 include =0 and =S.
[0073] Suitable divalent substituents on a saturated carbon atom of an "optionally substituted" group include the following: =0, =S, =NNR* 2, =NNHC(O)R*, =NNHC(O)OR*, =NNHS(O)2R*, =NR*, =NOR*, -O(C(R* 2))2 3O- or -S(C(R* 2))2 _3S- wherein each independent occurrence of R is selected from hydrogen, Ci_6 aliphatic which may be substituted as defined below, or an unsubstituted 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. Suitable divalent substituents that are bound to vicinal substitutable carbons of an "optionally substituted" group include: -O(CR 2)2_3O-, wherein each independent occurrence of R is selected from hydrogen, Ci_6 aliphatic which may be substituted as defined below, or an unsubstituted 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
[0074] Suitable substituents on the aliphatic group of R include halogen, -R*,
-(haloR*), -OH, -OR*, -O(haloR'), -CN, -C(O)OH, -C(O)OR*, -NH2, -NHR*, -NR*2, or -NO2, wherein each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently Ci_4 aliphatic, -CH2Ph, -O(CH2)0_iPh, or a 5-6- membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
[0075] Suitable substituents on a substitutable nitrogen of an "optionally substituted" group include -Rf, -NRf 2, -C(O)Rf, -C(O)ORf, -C(O)C(O)Rf, -C(O)CH2C(O)R1^, -S(O)2R1; -S(O)2NR^, -C(S)NR^, -C(NH)NR^, or -N(Rt)S(O)2Rt; wherein each Rf is independently hydrogen, Ci_6 aliphatic which may be substituted as defined below, unsubstituted -OPh, or an unsubstituted 5-6-membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the
taken together with their intervening atom(s) form an unsubstituted 3-12-membered saturated, partially unsaturated, or aryl mono- or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
[0076] Suitable substituents on the aliphatic group of R^ are independently halogen,
-R*, -(haloR*), -OH, -OR*, -O(haloR'), -CN, -C(O)OH, -C(O)OR*, -NH2, -NHR*, -NR*2, or -NO2, wherein each R* is unsubstituted or where preceded by "halo" is substituted only with one or more halogens, and is independently Ci_4aliphatic, -CH2Ph, -0(CH2)o iPh, or a 5-6-
membered saturated, partially unsaturated, or aryl ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
[0077] Partially unsaturated: As used herein, the term "partially unsaturated" refers to a ring moiety that includes at least one double or triple bond between ring atoms but is not aromatic. The term "partially unsaturated" is intended to encompass rings having multiple sites of unsaturation, but is not intended to include aryl or heteroaryl moieties, as herein defined.
[0078] Unsaturated: The term "unsaturated", as used herein, means that a moiety has one or more units of unsaturation.
BRIEF DESCRIPTION OF THE DRAWINGS
[0079] The drawings are for illustration purposes only, not for limitation.
[0080] Figure 1 is an exemplary graph showing the inhibition of IL-I induced TF-I cell proliferation by peptides 54-59.
[0081] Figure 2 is an exemplary graph showing the inhibition of IL-I induced TF-I cell proliferation by compounds 75-78.
[0082] Figure 3 illustrates activity of exemplary peptidomimetics 101.164-101.167.
DETAILED DESCRIPTION OF CERTAIN EMBODIMENTS
[0083] The present invention provides, among other things, peptidomimetics containing one or more lactams and/or Bab residues that can effectively modulate (e.g., inhibit or activate) the biological activity of IL-IR. In some embodiments, peptidomimetics of the present invention are modified from IL-IR modulatory peptides (such as Allosteramers™) by lactam and/or Bab replacement or insertion. Peptidomimetics according to the present invention can be used to treat various IL-I related diseases, disorders or conditions.
[0084] Various aspects of the invention are described in detail in the following sections. The use of sections is not meant to limit the invention. Each section can apply to
any aspect of the invention. In this application, the use of "or" means "and/or" unless stated otherwise.
IL-IR Modulatory Peptides
[0085] Various IL-IR modulatory peptides may be optimized according to the present invention. Suitable IL-IR modulatory peptides include antagonistic peptides or agonistic peptides. As used herein, an IL-IR antagonistic peptide refers to any peptide that can directly or indirectly inhibit, suppress, inactivate and/or decrease the receptor activity of IL-IR and/or IL-lRacP. As used herein, an IL-IR agonistic peptide refers to any peptide that can directly or indirectly activates, enhance, stimulate and/or increase the receptor activity of IL-IR and/or IL-lRacP. In particular, suitable IL-IR modulatory peptides may be Allosteramers™ (short peptides composed of 5-25 amino acids derived from body's own proteins that can interact with the protein from which it is derived, or with its associated proteins, without competing with a natural ligand) that interact with a region of the extracellular domain of the IL-lR/IL-lRacP receptor complex. Typically, suitable peptides for the invention modulate the IL-IR receptor activity non-competitively (i.e., without competing with a natural ligand of the receptor). In some embodiments, a suitable peptides for the invention is a Negative Allosteric Modulator (NAM) of the IL-IR activity. In some embodiments, a suitable peptide for the invention is a Positive Allosteric Modulator (PAM) of the IL-IR activity. In some embodiments, a suitable peptide is both an NAM and a PAM of the IL-IR activity.
[0086] In some embodiments, suitable IL-IR modulatory peptides may be strategically designed to interact with at least one of an extracellular flexible region of the IL- lR/IL-lRacP complex that are responsible for oligomerization, and that are important for the appropriate conformation of the IL-I receptor which enables signaling. Such flexible regions include, but are not limited to, juxtamembranous regions, regions containing α helix, β sheet, loops and/or β turns, regions between domains, regions between two β chains, and combinations thereof. Thus, in some embodiments, IL-IR modulatory peptides are designed based on amino acid sequences that appear within such flexible regions. This approach is known as Module X technology and is further described in U.S. Patent No. 7,432,341, entitled "Cytokine receptor modulators and method of modulating cytokine receptor activity," and in U.S. Pub. No. 20060094663 entitled "Interleukin-1 Receptor Antagonists,
Compositions, and Methods of Treatment," the entire disclosure of both of which are hereby incorporated by reference.
[0087] In some embodiments, suitable IL-IR modulatory peptides may be designed simply based on the primary linear amino acid sequence of extracellular or transmembrane regions of the IL-IR and IL-lRacP protein without first characterizing any tertiary or secondary structure of the receptor. This method is also referred to as the Module X "walking" method and is further described in U.S. Provisional Application Serial No. 61/172,533, entitled "TNF receptor antagonists and uses thereof," the entire disclosure of which is hereby incorporated by reference.
[0088] For example, suitable IL-IR modulatory peptides may be designed based on contiguous amino acids that appear in the extracellular and/or transmembrane regions of the IL-I receptor. The amino acid sequence of the IL-IR is shown below. The projected transmembrane domain is underlined and bolded. The extracellular region is N-terminal to the transmembrane domain.
MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEID VRPCPLNPNEHKGTITWYKD DSKTPVSTEQASRIHQHKEKL WFVP AKVEDSGHYYCVVRNSSYCLRIKISAKFVENE PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH FSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP VIVSP ANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP ANK RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLT VIIVCSVFIYKIFKIDIVL WYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIF VFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLG GSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGP QSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPATKEKLQREAHVPLG (SEQ ID NO: 1)
[0089] In some embodiments, suitable IL-IR modulatory peptides may be designed based on contiguous amino acids that appear in the extracellular regions of the IL-lRacP. The amino acid sequence of an exemplary isoform of the IL-lRacP protein is shown below. The sequences of other iso forms are known in the art. The projected transmembrane domain is underlined and bolded. The extracellular region is N-terminal to the transmembrane domain.
MTLL WCVVSL YFYGILQSDASERCDDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFN
YSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTC
MLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKL YIEYGIQRITCPNVDGYFPSSV
KPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTL
TVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDG
KKPDDITID VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARS AKGEVAKAA
KVKQKVP APRYTVELACGFGATVLL WILIWYHVYWLEMVLFYRAHFGTDETIL
DGKEYDIYVSYARNAEEEEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQ
KSRRLLVVLSPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVKETKVKELK
RAKTVLTVIKWKGEKSKYPQGRFWKQLQVAMPVKKSPRRSSSDEQGLSYSSLKN
(SEQ ID NO:2)
[0090] Typically, a suitable peptide is a short peptide. As used herein, a short peptide includes any peptide that contains up to 25 amino acids (e.g., up to 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 20, or 25 amino acids) or equivalents thereof. In some embodiments, a suitable peptide contains 5-25 amino acids (e.g., 5-20, 5-15, 5-12, 5-10, 6-25, 6-20, 6-15, 6-12, 6-10, 7-25, 7-20, 7-15, 7-12, or 7-10 amino acids) or equivalents thereof. In some embodiments, a suitable peptide is 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 20, or 25 amino acids long.
[0091] In some embodiments, candidate peptides are designed to contain a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of the IL- lRacP or IL-IR protein.
[0092] In some embodiments, a sequence corresponding to at least 5 (e.g., at least 6,
7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence having at least 70% (e.g., at least 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%) identical to the sequence of at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids. Percentage of amino acid sequence identity can be determined by alignment of amino acid sequences. Alignment of amino acid sequences can be achieved in various ways that are within the skill in the art, for instance, using publicly available computer software such as BLAST, ALIGN or Megalign (DNASTAR) software. Those skilled in the art can determine appropriate parameters for measuring alignment, including any algorithms needed to achieve maximal alignment over the full length of the sequences
being compared. Preferably, the WU-BLAST-2 software is used to determine amino acid sequence identity (Altschul et ah, Methods in Enzymology 266, 460-480 (1996); http://hg.wustl.edu/blast/README.html). WU-BLAST-2 uses several search parameters, most of which are set to the default values. The adjustable parameters are set with the following values: overlap span=l, overlap fraction=0.125, word threshold (T)=I 1. HSP score (S) and HSP S2 parameters are dynamic values and are established by the program itself, depending upon the composition of the particular sequence, however, the minimum values may be adjusted and are set as indicated above.
[0093] In some embodiments, a sequence corresponding to at least 5 (e.g., at least 6,
7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence otherwise identical to the sequence of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids but incorporating one or more D-amino acid substitutions for corresponding L-amino acids. Peptides containing such a sequence are also known as D- isomers. In some embodiments, a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence that is an inverse of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids. Peptides containing such a sequence are also known as reversed L-peptides. In some embodiments, a sequence corresponding to at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids that appear in an extracellular or transmembrane region of a receptor includes any sequence that is otherwise an inverse of the at least 5 (e.g., at least 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 18, 20, or 25) contiguous amino acids but incorporating one or more D-amino acid substitutions for corresponding L-amino acids. Peptides containing such a sequence are also known as reversed D-peptides.
[0094] In some embodiments, a peptide suitable for the invention contains a sequence that includes at least 4 (e.g., at least 5, 6, or 7) from at least 7 (e.g., at least 8, 9, 10, 11, 12) contiguous amino acids that appear in an extracellular or transmembrane region of the IL- lRacP or IL-IR protein, wherein the at least 4 (e.g., at least 5, 6, or 7) amino acids maintain their relative positions and/or spacing as they appear in the extracellular or transmembrane region of the IL-lRacP or IL-IR protein. In some embodiments, a peptide suitable for the invention contains a sequence that includes at least 4 (e.g., at least 5, 6, or 7) from at least 7
(e.g., at least 8, 9, 10, 11, 12) contiguous amino acids that appear in an extracellular or transmembrane region of the IL-lRacP or IL-IR protein, the at least 4 (e.g., at least 5, 6, or 7) amino acids maintain their relative positions and/or spacing, but in the inverse configuration, as they appear in the extracellular or transmembrane region of the IL-lRacP or IL-IR protein.
[0095] Exemplary IL-IR antagonistic peptides suitable for the present invention are shown in Table 1.
Table 1: Exemplary Peptides
[0096] Suitable peptides may include naturally-occurring amino acids and/or unnatural amino acids. For example, suitable peptides may be composed of all L-amino acids, all D-amino acids, a combination of L- and D-amino acids, or a combination of naturally-occurring and unnatural amino acids. Exemplary peptides containing a combination of L-amino acids, D-amino acids and unnatural amino acids are shown in Table 2.
Table 2: Additional Exemplary Peptides and Peptidomimetics
Unless otherwise noted, lower cases represent D-amino acids and upper cases represent L- amino acids.
Application Publication No. US 2006/0094663, entitled "Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment," the entire disclosure of which is hereby incorporated by reference.
Peptidomimetics containing lactam and/or Bab residues
[0098] One useful modification in optimizing a peptide structure is the addition of conformational constraints. Without wishing to be bound by theory, it is contemplated that conformational constraints can lock the secondary structure of a peptide in a bioactive conformation, thus enhancing biological potency by reducing the entropic cost of binding. If the conformation constraint stabilizes the bioactive conformation, the stabilization often results in a significant increase in biological activity. For example, alpha-amino-gamma- lactam (AgI) and beta-amino-gamma-lactam (BgI) can be utilized to constrain the backbone conformation of linear peptides to give beta-turn mimics. In AgI, the gamma-lactam may force the C-terminal amide into the trans-orientation and restricts the psi-torsion angle to the range -125 ± 10°, favoring a type II' beta-turn geometry contingent on configuration. Similarly, BgI too can stabilize a type II' beta-turn conformation contingent on configuration.
(S)-AgI (R)-AgI (R)-BgI (S)-BgI
[0099] In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams of formula (I):
(I)
wherein:
each Rx is independently -R, halogen, -OR, -SR, -N(R)2, -CN, -NO2, -C(O)R, -CO2R, - C(O)N(R)2, -C(O)C(O)R, -C(O)CH2C(O)R, -S(O)R, -SO2R, -SO2N(R)2, -NRC(O)R, - NRC(O)N(R)2, -NRSO2R, -NRSO2N(R)2, -N(R)N(R)2, -C=NN(R)2, -C=NOR, -OC(O)R, or -OC(O)N(R)2; each R is independently hydrogen or an optionally substituted group selected from Ci_6 aliphatic; phenyl; a 3- to 7-membered saturated or partially unsaturated carbocyclic ring; a 5- to 6-membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or a 4- to 7-membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or two R groups attached to the same nitrogen atom may be taken together with their intervening atoms to form a 4- to 7- membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independent selected from nitrogen, oxygen, and sulfur; m is O, 1, or 2; and n is O, 1, 2, or 3.
[0100] In some embodiments, m of formula (I) is O. In other embodiments, m is 1 or
2.
[0101] In some embodiments, n of formula (I) is 1. In other embodiments, n is 0 or 2.
[0102] In some embodiments, a lactam of formula (I) is alpha-amino-gamma-lactam
(AgI), beta-amino-gamma-lactam (BgI), or beta-hydroxy-alpha-amino-gamma-lactam (Agl(4- OH)).
[0103] In some embodiments, a lactam of formula (I) will take up the space of approximately one amino acid residue in a peptidomimetic.
[0104] In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams of formula (II):
(H)
wherein:
each Ry is independently -R, halogen, -OR, -SR, -N(R)2, -CN, -NO2, -C(O)R, -CO2R, - C(O)N(R)2, -C(O)C(O)R, -C(O)CH2C(O)R, -S(O)R, -SO2R, -SO2N(R)2, -NRC(O)R, - NRC(O)N(R)2, -NRSO2R, -NRSO2N(R)2, -N(R)N(R)2, -C=NN(R)2, -C=NOR, -OC(O)R, or -OC(O)N(R)2;
each R is independently hydrogen or an optionally substituted group selected from Ci_6 aliphatic; phenyl; a 3- to 7-membered saturated or partially unsaturated carbocyclic ring; a 5- to 6-membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or a 4- to 7-membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or
two R groups attached to the same nitrogen atom may be taken together with their intervening atoms to form a 4- to 7- membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independent selected from nitrogen, oxygen, and sulfur;
p is O, 1, or 2; and each q is independently O, 1, 2, or 3.
[0105] In some embodiments, p of formula (II) is O. In other embodiments, p is 1 or
2.
[0106] In some embodiments, each q of formula (II) is 1 or 2.
[0107] In some embodiments, a lactam of formula (II) is indolizidin-2-one amino acid
(I2aa), indolizidin-9-one amino acid (I9aa), or quinolizidinone amino acid (Qaa).
[0108] In some embodiments, a lactam of formula (II) will take up upto two amino acid residue space in a peptidomimetic.
[0109] In some embodiments, lactams suitable for the invention are β-, γ- or δ- lactams. In some embodiments, lactams suitable for the invention are four-, five-, six-, seven- or eight-membered lactams.
[0110] In addition, benzylaminobutyryl "Bab" residue may be used to optimize a peptide according to the present invention. In some embodiments, a peptidomimetic according to the present invention includes one ore more Bab residues as shown below:
Benzylaminobutyryl "Bab" residue
[0111] In some embodiments, the present invention provides derivatives containing lactams and/or Bab residues of various peptides described herein (e.g., in Tables 1 and 2). Suitable derivatives may contain one or more (e.g., one, two or three) lactam and/or Bab replacements or insertions. In some embodiments, derivatives according to the invention comprise a lactam and/or Bab insertion or replacement at position 1, 2, 3, 4, 5, 6, 7, 8 or 9 from the N-terminus of any one of the peptides described herein, for example as shown in Tables 1 (SEQ ID NO:3-40) and 2 (SEQ ID NO:41-60). In particular embodiments, derivatives according to the invention comprise a lactam and/or Bab insertion or replacement at position 1, 2, 3, 4, 5, 6, or 7 from the N-terminus of peptide 101.10 RYTVELA (SEQ ID NO:12).
[0112] In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) out of seven contiguous amino acids that appear in an extracellular or transmembrane region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relative positions as they appear in the extracellular
or transmembrane region of the IL-IR or IL-lRacP protein. In other embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) out of seven contiguous amino acids that appear in an extracellular or transmembrane region of the IL-IR or IL-lRacP protein, wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular or transmembrane region of the IL-IR or IL-lRacP protein. In some embodiments, the one or more lactams and/or Bab residues replace one or more amino acids of the seven contiguous amino acids. In some embodiments, the one or more lactams and/or Bab residues are inserted at the N-terminus, C-terminus, or internally.
[0113] In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, at least six) amino acids from any one of SEQ ID NOS:3-40, wherein the at least three (e.g., at least four, at least five, or at least six) amino acids maintain their relevant positions as they appear in the corresponding sequence. In some embodiments, the present invention provides a peptidomimetic comprising one or more lactams and/or Bab residues and at least three (e.g., at least four, at least five, or at least six) amino acids from RYTVELA (SEQ ID NO: 12), wherein the at least three (e.g., at least four, at least five, or at least six) amino aicds maintain their relevant positions as they appear in RYTVELA (SEQ ID NO: 12). In some embodiments, one or more lactams and/or Bab residues replace one or more amino acids of RYTVELA (SEQ ID NO: 12). In some embodiments, the one or more lactams are inserted at the N-terminus, C-terminus, or internally.
[0114] Various methods can be used to introduce lactam and/or Bab residue into the peptides described herein. In some embodiments, systematic scans of a peptide described herein with lactam and/or Bab can be used. Various synthetic strategies for the synthesis of AgI peptide mimics are known in the art and can be used for the present invention. See, for example, Toniolo, C. Int. J. Pept. Protein Res. 1990, 55, 287, and references therein; Wolf, J- P.; Rapoport, H. J. Org. Chem. 1989, 54, 3164. Schuster, M.; Blechert, S. Angew. Chem. Int. Ed. 1997, 36, 2036. Wolfe, M. S.; Dutta, D.; Aube, J. J. Org. Chem. 1997, 62, 654. (b) Nόth, J.; Frankowski, K. J.; Neuenwander, B.; Aube, J. J. Comb. Chem. 2008, 10, 456; Piscopio, A. P. D.; Miller J. F.; Koch K. Tetrahedron Letters. 1998, 39, 2667; Armstrong, S.K. J. Chem. Soc, Perkin Trans. 1 1998, 1, 371; Piscopio, A. D.; Miller, J. F.; Koch K. Tetrahedron 1999,
55, 8189; Galaud, F.; Lubell, W. D. Biopolymers (Peptide Science) 2005, 80, 665; Bhooma, R.; Rodney, J. J. Org. Chem. 2006, 71, 2151, and references therein, the teachings of all of which are incorporated herein by reference.
[0115] Exemplary methods are described in the Examples section. Additional methods are described in co-owned U.S. Patent Application entitled "Processes for Preparing Amino-substituted gamma-lactams" filed on even date, the entire disclosure of which is hereby incorporated by reference. In addition, various methods have been used to incorporate various lactams to other proteins and peptides. Those methods and lactams are suitable for the present invention and can be found in the following: Freidinger et al, Science 210:656-8 (1980) (alpha-amino-gamma-lactam incorporated into luteinizing hormone- releasing hormone (LRHH); Mishra et al, Prog, Neuropsychopharmacol. Biol. Psych. 14:821- 827 (1990) (amino-gamma-lactam analogs of the Pro-Gly-Leu-NHe sequence for D2 dopamine receptor modulation); United States Publication No. 2006/0229240 (parathyroid hormone (PTH) derivatives containing lactam bridges); United States Publication No. 2009/0209491 (lactam-containing inhibitors of post-pro line cleaving enzymes (PPCE)); Gomez et al, Bioorg. Med. Chem. Lett. 19:1733-1736 (2009) (lactam-containing peptidomimetic inhibitors of STAT3).
[0116] Although exemplary methods described in the Example sections are based on
IL-IR antagonistic peptide 101.10 RYTVELA (SEQ ID NO: 12), similar methods can be used to introduce various lactams and/or Bab residues into any one of the peptides described herein (e.g., peptides having an amino acid sequence as shown in Tables 1 and 2) or variants thereof. As used herein, variants of a peptide include peptides that have an amino acid sequence at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, identical to the sequence of the parent peptide. In some embodiments, variants of peptides as shown in Tables 1 and 2 (e.g., SEQ ID NOs:3-60) include peptides having at least three, four, five, six, or seven amino acids from any one of peptides as shown in Tables 1 and 2 (e.g., SEQ ID NOs: 3 -60), wherein the at least three, four, five, six, or seven amino acids maintain their relative positions and/or spacing as they appear in the corresponding parent peptide.
[0117] The biological activity of peptidomimetics synthesized according to the invention can be tested using various functional assays known in the art and as described herein. For example, the lactam peptidomimetics synthesized according to the invention can be tested for its ability to inhibit or enhance the activity of the IL-I receptor using various IL-
1 functional assays (e.g., thymocyte TF-I proliferation assay). Exemplary methods are described in the Examples section. Additional assays are described in U.S. Application Publication No. US 2006/0094663, entitled "Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment," the entire disclosure of which is hereby incorporated by reference.
[0118] The present invention further relates to methods of improving the biological activity of a peptide by imposing conformational constraints. In some embodiments, the methods according to the invention include introducing a lactam and/or Bab residue replacement or insertion into a peptide such that the lactam/Bab structure locks the secondary structure of a peptide in a bioactive conformation. In some embodiments, a lactam/Bab residue is introduced at N-terminus (also referred to as position 1 from the N-terminus) of a peptide. In some embodiments, a lactam/Bab residue is introduced at position 2, 3, 4, 5, 6, 7, 8 or 9, from the N-terminus of the peptide. In some embodiments, the methods include a step of testing the activity of modified peptide as compared to a control to identify modified peptides that have improved biological activity (e.g., the IL-IR antagonistic or agonistic activity). In some embodiments, the unmodified parent peptide is used as the control. In some embodiments, a modified peptide according to the invention has 2-fold, 2.5 -fold, 3- fold, 3.5-fold, 4-fold, 4.5-fold, 5-fold, 5.5-fold, 6-fold, 6.5-fold, 7-fold, 7.5-fold, 8-fold, 8.5- fold, 9-fold, 9.5-fold, or 10-fold increased IL-IR modulatory (e.g., antagonistic or agonistic) activity as compared to a control (e.g., an unmodified parent peptide).
[0119] Exemplary lactam peptidomimetics are shown in Tables 3, 4, and 6-8, and in the Examples.
Table 3. Exemplary Compounds ami TF-I Cells Proliferation Assay
* Results are shown as percentage of control.
Table 4. Exemplary peptidomimetics
aBold lettering indicates lactam residue. bRP-HPLC purity at 214 nm of the crude peptide. 0RP-HPLC purity at 214 nm of the purified peptide dYields after purification by RP-HPLC are based on Fmoc
Table 5. Exemplary peptidomimetics
aBold lettering indicates lactam residues. RP-HPLC % at 214 nm of the crude mixture of parent lactam peptide. 0RP-HPLC purity at 214 nm of the purified peptide dYields after purification by RP-HPLC are based on Fmoc loading test for Rink resin.
Table 6. Exemplary peptidomimetics
aBold lettering indicates lactam residues. RP-HPLC purity at 214 nm of the crude peptide. 0RP-HPLC purity at 214 nm of the purified peptide dYields after purification by RP-HPLC are based on Fmoc loading test for Rink resin. eThe cation [M+Na]+ was observed, theoretical mass was calculated accordingly.
Table 7. Exemplary peptidomimetics
0RP-HPLC purity at 214 nm of the purified peptide dYields after purification by RP-HPLC are based on Fmoc loading test for Rink resin. eThe cation [M+Na]+ was observed, theoretical mass was calculated accordingly.
Table 8. Exemplary peptidomimetics
aRP-HPLC purity at 214 nm of the crude peptide . RP-HPLC purity at 214 nm of the purified peptide cYields after purification by RP-HPLC are based on resin and lantern loading. Bold lettering indicates lactam residues.
Peptide preparation
[0120] Peptides (including the peptide portions of peptidomimetics) of the present invention are obtained by any method of peptide synthesis known to those skilled in the art, including synthetic (e.g., exclusive solid phase synthesis, partial solid phase synthesis, fragment condensation, classical solution synthesis) and recombinant techniques. For example, the peptides or peptide derivatives can be obtained by solid phase peptide synthesis, which in brief, consists of coupling the carboxyl group of the C-terminal amino acid to a resin (e.g., benzhydrylamine resin, chloromethylated resin, hydroxymethyl resin) and successively adding N-alpha protected amino acids. The protecting groups maybe any such groups known in the art. Before each new amino acid is added to the growing chain, the protecting group of the previous amino acid added to the chain is removed. Such solid phase synthesis has been described, for example, by Merrifϊeld, 1964, J. Am. Chem. Soc. 85: 2149; Vale et α/., 1981, Science, 213: 1394-1397, in US Patent Nos. 4,305,872 and 4,316,891, Bodonsky et ah, 1966, Chem. Ind. (London), 38:1597; Pietta and Marshall, 1970, Chem. Comm. 650. The coupling of amino acids to appropriate resins is also well known in the art and has been described in US Patent No. 4,244,946. (Reviewed in Houver-Weyl, Methods of Organic Chemistry. VoI E22a. Synthesis of Peptides and peptidomimetics, Murray Goodman, Editor-in-Chief, Thieme. Stuttgart. New York 2002).
[0121] During any process of the preparation of a compound of the present invention, it may desirable to protect sensitive reactive groups on any of the molecule concerned. This may be achieved by means of conventional protecting groups such as those described in Protective Groups In Organic Synthesis by T.W. Greene & P. G. M. Wuts, 1991, John Wiley and Sons, New- York; and Peptides: chemistry and Biology by Sewald and Jakubke, 2002, Wiley- VCH, Wheinheim p.142. For example, alpha amino protecting groups include acyl type protecting groups (e.g., trifluoroacetyl, formyl, acetyl), aliphatic urethane protecting groups (e.g., t-butyloxycarbonyl (BOC), cyclohexyloxycarbonyl), aromatic urethane type protecting groups (e.g., fluorenyl-9-methoxy-carbonyl (Fmoc), benzyloxycarbonyl (Cbz), Cbz derivatives) and alkyl type protecting groups (e.g., triphenyl methyl, benzyl). The amino acids side chain protecting groups include benzyl (For Thr and Ser), Cbz (Tyr, Thr, Ser, Arg, Lys), methyl ethyl, cyclohexyl (Asp, His), Boc (Arg, His, Cys) etc. The protecting groups may be removed at a convenient subsequent stage using methods known in the art.
[0122] In one embodiment, the peptides of this invention, including the analogs and other modified variants, may generally be synthesized according to the FMOC protocol in an organic phase with protective groups. They can be purified with a yield of 70% with HPLC on a C18 column and eluted with an acetonitrile gradient of 10-60%. Their molecular weight can then be verified by mass spectrometry (Reviewed in Fields, G.B. "Solid-Phase Peptide Synthesis". Methods in Enzymology. Vol. 289, Academic Press, 1997).
[0123] Alternatively, peptides of this invention that consist of genetically encoded amino acids may be prepared in recombinant systems using polynucleotide sequences encoding the peptides. It is understood that a peptide of this invention may contain more than one of the above-described modifications within the same peptide.
[0124] Purification of the synthesized peptide or peptide derivatives is carried out by standard methods, including chromatography (e.g., ion exchange, size exclusion, affinity), centrifugation, precipitation or any standard technique for the purification of peptides and peptide derivatives. In one embodiment, thin-layered chromatography is employed. In another embodiment, reverse phase HPLC is employed. Other purification techniques well known in the art and suitable for peptide isolation and purification may be used in the present invention.
[0125] Where the processes for the preparation of the compounds according to the present invention give rise to mixtures of stereoisomers, these isomers may be separated by conventional techniques such as preparative chromatography. The compounds may be prepared in racemic form, or individual enantiomers may be prepared either by enantiospecific synthesis or by resolution. The compounds may, for example, be resolved into their components enantiomers by standard techniques such as the formation of diastereoisomeric pairs by salt formation with an optically active acid followed by fractional crystallization and regeneration of the free base. The compounds may also be resolved by formation of diastereomeric esters or amides, followed by removal of the chiral auxiliary. Alternatively, the compounds may be resolved using chiral HPLC column.
Further peptidomimetic modifications
[0126] Peptide mimetics that are structurally related to therapeutically useful peptides may be used to produce an equivalent or enhanced therapeutic or prophylactic effect. Generally, peptidomimetics are structurally similar to paradigm polypeptide (i.e., a polypeptide that has a biological or pharmacological activity) such as naturally occurring receptor-binding polypeptides but have one or more peptide linkages optionally replaced by linkages like -CH2NH-, -CH2S-, -CH2-CH2-, -CH=CH- (cis and trans), -CH2SO-, - CH(OH)CH2-, -COCH2- etc., by methods well known in the art (Spatola A.F., Peptide Backbone Modifications, Vega Data, March 1983, 1(3): 267; Spatola et ah, Life ScL, 1986, 38:1243-1249; Hudson D. et al., Int. J. Pept. Res. 1979., 14: 177-185; Weinstein. B., 1983, Chemistry and Biochemistry, of Amino Acids, Peptides and Proteins, Weinstein Eds, Marcel Dekker, New- York). Such peptide mimetics may have significant advantages over natural polypeptides including more economical production, greater chemical stability, enhanced pharmacological properties (e.g., half-life, absorption, potency, efficiency etc), reduced antigenicity and others.
[0127] While peptides are effective in inhibiting wild-type IL-I in vitro, their effectiveness in vivo might be compromised by the presence of proteases. Serum proteases have specific substrate requirements. The substrate must have both L-amino acids and peptide bonds for cleavage. Furthermore, exopeptidases, which represent the most prominent component of the protease activity in serum, usually act on the first peptide bond of the peptide and require a free N-terminus (Powell et al. 1993). In light of this, it is often advantageous to utilize modified versions of peptides also termed peptide analogs or derivatives. The modified peptides retain the structural characteristics of the original L- amino acid peptides that confer biological activity with regard to IL-I, but are advantageously not readily susceptible to cleavage by protease and/or exopeptidases.
[0128] Systematic substitution of one or more amino acids of a consensus sequence with D-amino acid of the same type (e.g., D-lysine in place of L-lysine) may be used to generate more stable peptides. Thus, a peptide derivative or peptidomimetic of the present invention may be all L, all D or mixed D, L peptide. In some embodiments, peptides or peptidomimetics contain all D-amino acids. In some embodiments, peptides or peptidomimetics contain a D-amino acid at N-terminus or C-terminus. Reverse-D peptides are peptides containing D-amino acids, arranged in a reverse sequence relative to a peptide
containing L-amino acids. Thus, the C-terminal residue of an L-amino acid peptide becomes N-terminal for the D-amino acid peptide, and so forth. It is thought that a reverse D-peptide retains the same tertiary conformation and therefore the same activity, as the corresponding L-amino acid peptide, but is more stable to enzymatic degradation in vitro and in vivo, and thus have greater therapeutic efficacy than the original peptide. In addition to reverse-D- peptide, constrained peptides comprising a consensus sequence or a substantially identical consensus sequence variation may be generated by methods well known in the art (Rizo et Gierasch, Ann. Rev. Biochem., 1992., 61 : 387), for example, by adding cysteine residues capable of forming disulfide bridges which cyclize the peptide. Cyclic peptides have no free N- or C -termini.
[0129] A cyclic derivative containing intramolecular disulfide bond may be prepared by conventional solid phase synthesis while incorporating suitable S-protected cysteine or homocysteine residues at the positions selected for cyclization such as the amino and carboxy termini (SahM et al, 1996., J. Pharm. Pharmacol. 48: 197). Following completion of the chain assembly, cyclization can be performed either (1) by selective removal of the S- protecting group with a consequent on-support oxidation of the corresponding two free SH- functions, to form a S-S bonds, followed by conventional removal of the product from the support and appropriate purification procedure; or (2) by removal of the peptide from the support along with complete side chain deprotection, followed by oxidation of the free SH- functions in highly dilute aqueous solution.
[0130] A cyclic derivative containing an intramolecular amide bond may be prepared by conventional solid phase synthesis while incorporating suitable amino and carboxyl side chain protected amino acid derivatives, at the position selected for cyclization. The cyclic derivatives containing intramolecular -S-alkyl bonds can be prepared by conventional solid phases while incorporating an amino acid residue with a suitable amino-protected side chain, and a suitable S-protected cysteine or homocysteine residue at the position selected for cyclization.
[0131] Substitution of unnatural amino acids for natural amino acids in a subsequence of the peptides can also confer resistance to proteolysis. Such a substitution can, for instance, confer resistance to proteolysis by exopeptidases acting on the N-terminus. Such substitutions have been described and these substitutions do not affect biological activity. Examples of non-naturally occurring amino acids include α,α -disubstituted amino acids, N-alkyl amino
acids, lactic acids, C-α-methyl amino acids, and β-methyl amino acids. Amino acids analogs useful in the present invention may include but are not limited to β-alanine, norvaline, norleucine, 4-aminobutyric acid, orithine, hydroxyproline, sarcosine, citrulline, cysteic acid, cyclohexylalanine, 2-aminoisobutyric acid, 6-aminohexanoic acid, t-butylglycine, phenylglycine, o-phosphoserine, N-acetyl serine, N-formylmethionine, 3-methylhistidine and other unconventional amino acids. Furthermore, the synthesis of peptides with unnatural amino acids is routine and known in the art.
[0132] One other effective approach to confer resistance to peptidases acting on the
N-terminal or C-terminal residues of a peptide is to add chemical groups at the peptide termini, such that the modified peptide is no longer a substrate for the peptidase. One such chemical modification is glycosylation of the peptides at either or both termini. Certain chemical modifications, in particular N-terminal glycosylation, have been shown to increase the stability of peptides in human serum (Powell et al. 1993). Other chemical modifications which enhance serum stability include, but are not limited to, the addition of an N-terminal alkyl group, consisting of a lower alkyl of from 1 to 20 carbons, such as an acetyl group, and/or the addition of a C-terminal amide or substituted amide group. In particular the present invention includes modified peptides consisting of peptides bearing an N-terminal acetyl group and/or a C-terminal amide group.
[0133] Also included by the present invention are other types of peptide derivatives containing additional chemical moieties not normally part of the peptide, provided that the derivative retains the desired functional activity of the peptide. Examples of such derivatives include (i) N-acyl derivatives of the amino terminal or of another free amino group, wherein the acyl group may be an alkanoyl group (e.g., acetyl, hexanoyl, octanoyl), an aroyl group (e.g., benzoyl) or a blocking group such as Fmoc (fluorenylmethyl-O-CO-); (ii) esters of the carboxy terminal or of another free carboxy or hydroxyl group; (iii) amide of the carboxyterminal or of another free carboxyl group produced by reaction with ammonia or with a suitable amine; (iv) phosphorylated derivatives; (v) derivatives conjugated to an antibody or other biological ligand and other types of derivatives.
[0134] Longer peptide sequences which result from the addition of extra amino acid residues to the peptides of the invention are encompassed by the present invention.
[0135] Other derivatives included in the present invention are dual peptides consisting of two of the same, or two different peptides of the present invention covalently linked to one another either directly or through a spacer, such as by a short stretch of alanine residues or by a putative site for proteolysis (e.g., by cathepsin, see US Patent No. 5,126,249 and European Patent No. 495,049). Multimers of the peptides of the present invention consist of polymer of molecules formed from the same or different peptides or derivatives thereof.
[0136] In another embodiment, the peptide derivatives of the present invention are chimeric or fusion proteins comprising a peptide of the present invention or fragment thereof linked at its amino or carboxy terminal end, or both, to an amino acid sequence of a different protein. Such a chimeric or fusion protein may be produced by recombinant expression of a nucleic acid encoding the protein. In one embodiment such a chimeric or fusion protein contains at least 6 amino acids of a peptide of the present invention and has a functional activity equivalent or greater than that of a peptide of the invention.
[0137] Peptide derivatives of the present invention can be made by altering the amino acid sequences by substitutions, additions or deletions that provide for functionally equivalent molecules, or functionally enhanced or diminished molecules, as desired. The derivative of the present invention include, but are not limited to those containing, as primary amino acid sequence, all or part of the amino acid sequence of the peptides of the present invention including altered sequences in which functionally equivalent amino acid residues are substituted for an equivalent in the sequence. For example, one or more amino acid residues within the sequence can be substituted by another amino acid of a similar polarity, which act as a functional equivalent, resulting in a silent alteration. Substitution for an amino acid within the sequence may be selected from other members of the class to which the amino acid belongs. For example, the positively charged (basic) amino acids include, arginine, lysine and histidine. The nonpolar (hydrophobic) amino acids include, leucine, isoleucine, alanine, phenylalanine, valine, proline, tryptophan and methionine. The uncharged polar amino acids include serine, threonine, cysteine, tyrosine, asparagine and glutamine. The negatively charged (acid) amino acids include glutamic acid and aspartic acid. The amino acid glycine is sometimes included in the nonpolar amino acids family and sometimes in the uncharged (neutral) polar amino acids family. Substitutions that are done within a family of amino acids are generally understood to be conservative substitutions.
[0138] Once a peptidomimetic of the present invention is identified, it may be isolated and purified by any number of standard methods including but not limited to differential solubility (i.e., precipitation), centrifugation, chromatography (affinity, ion exchange, size exclusion and the like) or by any other standard techniques used for the purification of peptides, peptidomimetics or proteins. The functional properties of an identified peptide of interest may be evaluated using any functional assay known in the art. In one embodiment assays for evaluating downstream receptor function in intracellular signaling are used (e.g., PGE2 synthesis).
[0139] In one embodiment, peptidomimetic compounds of the present invention are obtained with the following three-phase process: 1) scanning the peptides of the present invention to identify regions of secondary structure involved in the binding of the IL-I receptor; 2) using conformational^ constrained dipeptide surrogates to refine the backbone geometry and provide organic platforms corresponding to these surrogates; and 3) using the best organic platforms to display organic pharmocophores in libraries of candidates designed to mimic the desired activity of the native peptide. In more details the three phases are as follows. In phase 1, the peptide leads are scanned and their structure abridged to identify the requirements for their activity. A series of peptide analogs of the original are synthesized. In phase 2, the best peptide analogs are investigated using the conformationally constrained dipeptide surrogates. Indolizidin-2-one, indolizidin-9-one and quinolizidinone amino acids (I2aa, I9aa and Qaa respectively) are used as platforms for studying backbone geometry of the best peptide candidates. These and related platforms (Reviewed in Halab, Li; Gosselin, F; Lubell, WD; Biopolymers (Peptide Science) VoI 55, 101-122. 2000; Hanessian, S.J. McNaughton-Smith G; Lombart, H-G.; Lubell ,W.D. Tetrahedron Vol. 53, 12789-12854, 1997) may be introduced at specific regions of the peptide in order to orient the pharmacophores in different directions. Biological evaluation of these analogs identifies improved leads that mimic the geometric requirements for activity. In phase 3, the platforms from the most active leads are used to display organic surrogates of the pharmacophores responsible for activity of the native peptide. The pharmacophores and scaffolds are combined in a parallel synthesis format. Derivation of peptides and the different phases can be done by other means and methods known in the art.
[0140] Structure function relationships determined from peptidomimetics of the present invention may be used to refine and prepare analogous molecular structures having
similar or better properties. Thus, also within the scope of the present invention are molecules, in addition to those specifically disclosed, that share the structure, polarity, charge characteristics and side chain properties of the specific embodiments exemplified herein.
[0141] Peptidomimetics of the present invention are functionally active (i.e., capable of exhibiting one or more of the identified functional activities associated with a peptide of the present invention). For example, such peptides, peptide derivatives, peptidomimetics or analogs that inhibit a desired property (e.g., binding of the IL-lRacP to a protein partner or ligand) can be used as inhibitors of such property and its physiological correlates. Peptides, derivatives, peptidomimetics or analogs of the peptides of the present invention can be tested for the inhibition of cell signaling through the IL-lR/IL-lRacP receptor by any functional assay known in the art (e.g., PGE2 synthesis).
Assays
[0142] Methods for testing the ability of candidate compounds to inhibit or activate
IL-I receptor activity are presented herein. It will be understood that the invention is not so limited. Indeed, other assays well known in the art can be used in order to identify noncompetitive, extracellular agonists or antagonists of the present invention.
[0143] Generally, screens of an IL-lR/IL-lRacP antagonist or agonist may be based on assays that measure a biological activity of IL-lR/IL-lRacP. Assays of the present invention employ either a natural or recombinant IL-I receptor. A cell fraction or cell free screening assays for antagonists of IL-I activity can use in situ purified, or purified recombinant IL-I receptor. Cell-based assays can employ cells which express IL-I receptor naturally, or which contain recombinant IL-I receptor. In all cases, the biological activity of IL-I receptor can be directly or indirectly measured; thus inhibitors or activators of IL-I receptor activity can be identified.
[0144] In some embodiments, an assay is a cell-based assay in which a cell which expresses a IL-lR/IL-lRacP receptor complex or biologically active portion thereof, either natural or recombinant in origin, is contacted with a test compound, and the ability of the test compound to modulate IL-lR/IL-lRacP receptor biological activity, e.g., modulation of PGE2 production, proliferation assays, binding of IL-IR to a binding partner (IL-lRacP) or any other measurable biological activity of the IL-I receptor is determined.
[0145] In some embodiments, determining the ability of the test compound to modulate the activity of IL-lR/IL-lRacP receptor complex can be accomplished by determining the ability of the test compound to modulate the activity of a downstream effector of an IL-lR/IL-lRacP receptor target molecule. For example, the activity of the test compound on the effector molecule can be determined. Non- limiting examples of such downstream effector, include interleukin receptor activated kinase (IRAK); TRAF, activation of NI-KB (e.g. p65), mutagenic activated protein kinases (MAPK). Other examples of effector molecules which could be assayed to define the modulatory (agonist or antagonist) activity of the compounds of the present invention are described in Sims et al. 2002; and Kashiwamura et al. 2002.
[0146] In some embodiments, it may be desirable to immobilize either IL-I, IL-IR,
IL-lRacP or an interacting peptide or peptidomimetic of the present invention to facilitate separation of complexed from uncomplexed forms of one or both of the interacting proteins, as well as to accommodate automation of the assay. Binding of a test compound to IL-IR protein or interaction of IL-IR protein with a target molecule (e.g., IL-lRacP) in the presence and absence of a candidate compound can be accomplished in any vessel suitable for containing the reactants. Examples of such vessels include microtiter plates, test tubes and micro-centrifuge tubes. In one embodiment a fusion protein can be provided which adds a domain that allows one or both of the proteins to be bound to a matrix. For example, glutathione-S-transferase/IL-lR fusion proteins or glutathione-S-transferase/IL-lRacP fusion proteins can be adsorbed onto glutathione sepharose beads (Sigma Chemical, St. Louis, MO), or glutathione derivatized microtiter plates, which are then combined with the test compound or the test compound and either the non-adsorbed target protein or IL-IR protein and the mixture incubated under conditions conducive to complex formation (e.g. at physiological conditions for salt and pH). Following incubation the beads or microtiter plate wells are washed to remove any unbound components, and complex formation determined either directly or indirectly, for example, as described above. Alternatively, the complexes can be dissociated from the matrix, and the level of IL-IR binding or activity determined using standard techniques.
[0147] It will be understood that the in vivo experimental models such as described and exemplified herein can also be used to carry out an in vitro assay.
In vitro assays
[0148] In some embodiments, candidate peptides or peptidometics are tested for their ability to activate or inhibit ability of an IL-I receptor to modulate cellular proliferation with the incorporated tritiated thymidine method. In some embodiments, candidate peptides are tested for their ability to inhibit ability of an IL-I receptor to modulate cellular proliferation, using for example, the assays described in (Baker et al. 1995; Cheviron, Grillon et al. 1996); (Elliott et al. 1999; Hu et al. 1999).
[0149] In some embodiments, candidate peptides or peptidomimetics are tested for their ability to modulate the phosphorylation state of IL-IR or portion thereof, or an upstream or downstream target protein in the IL-lR/IL-lRacP pathway, using for example an in vitro kinase assay.
[0150] In some embodiments, candidate peptides targeting IL-IR are tested for PGE2 levels, IL-6 or collagenase expression or any other molecule having a level which is modified following IL-I stimulation in IL-lR/ILlRacP expressing cells, such as chondrocytes and fibroblasts.
[0151] Additonal assays are known in the art and examples are described in
In vivo
[0152] The assays described above may be used as initial or primary screens to detect promising lead compounds for further development. Lead peptides will be further assessed in additional, different screens. Therefore, this invention also includes secondary IL-IR screens that may involve various assays utilizing mammalian cell lines expressing these receptors or other assays.
[0153] Tertiary screens may involve the study of the identified inhibitors in animal models for clinical symptoms. Accordingly, it is within the scope of this invention to further use an agent (peptide or peptidomimetic) identified as described herein in an appropriate animal model such as a rat or a mouse. For example, a peptide can be used in an animal model to determine the efficacy, toxicity, or side effects of treatment with such an agent. Alternatively, an agent identified as described herein can be used in an animal model to determine the mechanism of action of such an agent. Furthermore, this invention pertains to
uses of novel agents identified by the above-described screening assays for treatment (e.g. treatments of different types of disorders associated with a deregulation or malfunction of IL- 1 receptor), as described herein. Non-limiting animal models which can be used in such assays include: collagen-induced arthritis in rat, animal model of acute IBD, tumor growth in immunosuppressed mouse, sensitization of the airways in newborn mice and any other known animal model including transgenic animals.
[0154] Additional assays for testing and identifying IL-IR antagonists are described in U.S. Application Publication No. US 2006/0094663, entitled "Interleukin-1 Receptor Antagonists, Compositions, and Methods of Treatment," the disclosure of which is incorporated by reference.
Pharmaceutical compositions
[0155] The present invention relates to a method for modulating (e.g., inhibiting or activating) IL-I receptor activity through its interaction with the peptides, peptide derivatives and peptidomimetics of the present invention. In view of the importance of IL-I and or IL- lR/ILlRacP receptor function in numerous pathways and conditions in animals, the peptides, peptide derivatives and peptidomimetics of the present invention are useful in the treatment of IL-I related diseases, disorders or conditions.
[0156] Therefore, methods of the present invention comprise administering to a subject in need thereof or at risk of being in need thereof an effective amount of a peptide, peptide derivative or peptidomimetic, or a composition comprising a peptide, peptide derivative or peptidomimetic to a subject, to modulate (e.g., inhibit) IL-lR/RacP biological activity. In one embodiment, an effective amount of a therapeutic composition comprising a peptide or peptide derivative thereof and a suitable pharmaceutical carrier is administered to a subject to inhibit IL-lR/IL-lRacP biological activity to prevent, ameliorate symptoms or treat a disorder, disease or condition related to abnormal signaling through IL-lR/IL-lRacP (e.g., overstimulation of the IL-I /IL- lRacP receptor via an overproduction of IL-I /IL-I RacP ligand or via a constitutive Iy active receptor or any other defect). In one embodiment, the subject is an animal. In another embodiment, the subject is a mammal, and preferably a human.
[0157] The peptides, peptide derivatives and peptidomimetics of the present invention are used in the treatment, prophylaxis or amelioration of symptoms in any disease condition
or disorder where the inhibition of IL-lR/IL-lRacP biological activity might be beneficial. Diseases, conditions or disorders to which the peptides, peptide derivatives or peptidomimetics of the present invention may be beneficial include, but are not limited to the following examples: chronic and acute inflammation diseases like rheumatoid arthritis, inflammatory bowel disease, septic shock, osteoarthritis, psoriasis, encephalitis, glomerulonephritis, respiratory distress syndrome and Reiter's syndrome. Other conditions include, systemic lupus erythematosus, scleroderma, Crohn's disease, ulcerative colitis, inflammatory joint disease, cachexia in certain leukemias, Alzheimer's disease, numerous types of cancers, diabetes mellitus (type I), pulmonary hypertension, stroke, periventricular leucopenia and meningitis.
[0158] The present invention can also be used to treat other inflammatory diseases, disorders and conditions including, but not limited to, CNS demyelinating diseases, multiple sclerosis, acute disseminated encephalomyelitis (ADEM), idiopathic inflammatory demyelinating disease, transverse myelitis, Devic's disease, progressive multifocal leukoencephaly, Guillain-Barre syndrome, chronic inflammatory demyelinating polyneuropathy, anti-MAG neuropathy, inflammatory bowel disease, sepsis, septic shock, adult respiratory distress syndrome, pancreatitis, trauma-induced shock, asthma, bronchial asthma, allergic rhinitis, cystic fibrosis, stroke, acute bronchitis, chronic bronchitis, acute bronchiolitis, chronic bronchiolitis, gout, spondylarthropathris, ankylosing spondylitis, Reiter's syndrome, psoriatic arthropathy, enterapathric spondylitis, juvenile arthropathy or juvenile ankylosing spondylitis, reactive arthropathy, infectious or post-infectious arthritis, gonoccocal arthritis, tuberculous arthritis, viral arthritis, fungal arthritis, syphilitic arthritis, Lyme disease, arthritis associated with "vasculitic syndromes," polyarteritis nodosa, hypersensitivity vasculitis, Luegenec's granulomatosis, polymyalgin rheumatica, joint cell arteritis, calcium crystal deposition arthropathris, pseudo gout, non-articular rheumatism, bursitis, tenosynomitis, epicondylitis (tennis elbow), carpal tunnel syndrome, repetitive use injury (typing), miscellaneous forms of arthritis, neuropathic joint disease (charco and joint), hemarthrosis (hemarthrosic), Henoch-Schonlein purpura, hypertrophic osteoarthropathy, multicentric reticulohistiocytosis, arthritis associated with certain diseases, surcoilosis, hemochromatosis, sickle cell disease and other hemoglobinopathries, hyperlipoproteineimia, hypogammaglobulinemia, hyperparathyroidism, acromegaly, familial Mediterranean fever, Behat's Disease, systemic lupus erythrematosis, and relapsing polychondritis, inflammatory conditions resulting from harmful stimuli, such as pathogens, damaged cells, or irritants,
sarcoidosis, disseminated intravascular coagulation, atherosclerosis, Kawasaki's disease, macrophage activation syndrome (MAS), HIV, graft-versus-host disease, Sjogren's syndrome, vasculitis, autoimmune thyroiditis, dermatitis, atopic dermatitis, myasthenia gravis, inflammatory conditions of the skin, cardiovascular system, nervous system, liver, kidney and pancreas, cirrhosis, eosinophilic esophagitis, cardiovascular disorders, disorders associated with wound healing, respiratory disorders, chronic obstructive pulmonary disease, emphysema, acute inflammatory conditions, atopic inflammatory disorders, bacterial, viral, fungal or protozoan infections, pulmonary diseases, systemic inflammatory response syndrome (SIRS), hemophagocytic lymphohistiocytosis (HLH), juvenile rheumatoid arthritis, osteoarthritis, psoriatic arthritis, lupus nephritis, lupus-associated arthritis, ankylosing spondylitis, autoimmune diseases and related diseases or conditions.
[0159] Compositions within the scope of the present invention should contain the active agent (e.g. peptide, peptide derivative or peptidomimetic) in an amount effective to achieve the desired therapeutic effect while minimizing adverse side effects. Pharmaceutically acceptable preparations and salts of the active agent are within the scope of the present invention and are well known in the art. For the administration of polypeptide antagonists and the like, the amount administered should be chosen so as to minimize adverse side effects. The amount of the therapeutic or pharmaceutical composition which is effective in the treatment of a particular disease, disorder or condition will depend on the nature and severity of the disease, the target site of action, the patient's weight, special diets being followed by the patient, concurrent medications being used, the administration route and other factors that will be recognized by those skilled in the art. The dosage will be adapted by the clinician in accordance with conventional factors such as the extent of the disease and different parameters from the patient. Typically, 0.001 to 100 mg/kg/day will be administered to the subject. Effective doses may be extrapolated from dose response curves derived from in vitro or animal model test systems. For example, in order to obtain an effective mg/kg dose for humans based on data generated from rat studies, the effective mg/kg dosage in rat is divided by six.
[0160] Various delivery systems are known and can be used to administer peptides, peptide derivatives or peptidomimetics or a pharmaceutical composition of the present invention. The pharmaceutical composition of the present invention can be administered by any suitable route including, intravenous or intramuscular injection, intraventricular or
intrathecal injection (for central nervous system administration), orally, topically, subcutaneously, subconjunctival^, or via intranasal, intradermal, sublingual, vaginal, rectal or epidural routes.
[0161] Other delivery system well known in the art can be used for delivery of the pharmaceutical compositions of the present invention, for example via aqueous solutions, encapsulation in microparticles, or microcapsules.
[0162] In yet another embodiment, the pharmaceutical compositions of the present invention can be delivered in a controlled release system. In some embodiments, polymeric materials are used (see Smolen and Ball, Controlled Drug Bioavailability, Drug product design and performance, 1984, John Wiley & Sons; Ranade and Hollinger, Drug Delivery Systems, pharmacology and toxicology series, 2003, 2nd edition, CRRC Press); in other embodiments, a pump is used (Saudek et al, 1989, N. Engl. J. Med. 321 : 574).
[0163] Compounds of the present invention may also be delivered by the use of monoclonal antibodies as individual carriers to which the compound molecules are coupled. The compounds of the present invention may also be coupled to a class of biodegradable polymers useful in achieving controlled release of the drug, non-limiting examples, include: polylactic acid, polyorthoesters, cross-linked amphipathic block copolymers and hydrogels, polyhydroxy butyric acid and polydihydropyrans.
[0164] As mentioned above, pharmaceutical compositions of the present invention comprise a peptide, peptide derivative or peptidomimetic combined with a pharmaceutically acceptable carrier. The term carrier refers to diluents, adjuvants, excipients such as a filler or a binder, a disintegrating agent, a lubricant a silica flow conditioner a stabilizing agent or vehicles with which the peptide, peptide derivative or peptidomimetic is administered. Such pharmaceutical carriers include sterile liquids such as water and oils including mineral oil, vegetable oil (e.g., peanut oil, soybean oil, sesame oil, canola oil), animal oil or oil of synthetic origin. Aqueous glycerol and dextrose solutions as well as saline solutions may also be employed as liquid carriers of the pharmaceutical compositions of the present invention. Of course, the choice of the carrier depends on the nature of the peptide, peptide derivative or peptidomimetic, its solubility and other physiological properties as well as the target site of delivery and application. For example, carriers that can penetrate the blood brain barrier are used for treatment, prophylaxis or amelioration of symptoms of diseases or conditions (e.g.
inflammation) in the central nervous system. Examples of suitable pharmaceutical carriers are described in Remington: The Science and Practice of Pharmacy by Alfonso R. Gennaro, 2003, 21th edition, Mack Publishing Company.
[0165] Further pharmaceutically suitable materials that may be incorporated in pharmaceutical preparations of the present invention include absorption enhancers, pH regulators and buffers, osmolarity adjusters, preservatives, stabilizers, antioxidants, surfactants, thickeners, emollient, dispersing agents, flavoring agents, coloring agents and wetting agents.
[0166] Examples of suitable pharmaceutical excipients include water, glucose, sucrose, lactose, glycol, ethanol, glycerol monostearate, gelatin, rice, starch flour, chalk, sodium stearate, malt, sodium chloride and the like. The pharmaceutical compositions of the present invention can take the form of solutions, capsules, tablets, creams, gels, powders sustained release formulations and the like. The composition can be formulated as a suppository, with traditional binders and carriers such as triglycerides (see Remington: The Science and Practice of Pharmacy by Alfonso R. Gennaro, 2003, 21th edition, Mack Publishing Company). Such compositions contain a therapeutically effective amount of the therapeutic composition, together with a suitable amount of carrier so as to provide the form for proper administration to the subject. The formulations are designed so as to suit the mode of administration and the target site of action (e.g., a particular organ or cell type).
[0167] The pharmaceutical compositions of the present invention can be formulated as neutral or salt forms. Pharmaceutically acceptable salts include those that form with free amino groups and those that react with free carboxyl groups. Non-toxic alkali metal, alkaline earth metal and ammonium salts commonly used in the pharmaceutical industry include sodium, potassium, lithium, calcium, magnesium, barium, ammonium, and protamine zinc salts, which are prepared by methods well known in the art. The term also includes non-toxic acid addition salts, which are generally prepared by reacting the compounds of the present invention with suitable organic or inorganic acid. Representative salts include the hydrobromide, hydrochloride, valerate, oxalate, oleate, laureate, borate, benzoate, sulfate, bisulfate, acetate, phosphate, tysolate, citrate, maleate, fumarate, tartrate, succinate, napsylate salts and the like.
[0168] Examples of fillers or binders that may be used in accordance with the present invention include acacia, alginic acid, calcium phosphate (dibasic), carboxymethylcellulose, carboxymethylcellulose sodium, hydroxyethylcellulose, hydroxypropylcellulose, hydroxypropylmethylcellulose, dextrin, dextrates, sucrose, tylose, pregelatinized starch, calcium sulfate, amylose, glycine, bentonite, maltose, sorbitol, ethylcellulose, disodium hydrogen phosphate, disodium phosphate, disodium pyrosulfϊte, polyvinyl alcohol, gelatin, glucose, guar gum, liquid glucose, compressible sugar, magnesium aluminum silicate, maltodextrin, polyethylene oxide, polymethacrylates, povidone, sodium alginate, tragacanth micro crystalline cellulose, starch, and zein. In certain embodiments, a filler or binder is microcrystalline cellulose.
[0169] Examples of disintegrating agents that may be used include alginic acid, carboxymethylcellulose, carboxymethylcellulose sodium, hydroxypropylcellulose (low substituted), microcrystalline cellulose, powdered cellulose, colloidal silicon dioxide, sodium croscarmellose, crospovidone, methylcellulose, polacrilin potassium, povidone, sodium alginate, sodium starch glycolate, starch, disodium disulfϊte, disodium edathamil, disodium edetate, disodiumethylenediaminetetraacetate (EDTA) crosslinked polyvinylpyrollidines, pregelatinized starch, carboxymethyl starch, sodium carboxymethyl starch, microcrystalline cellulose.
[0170] Examples of lubricants include calcium stearate, canola oil, glyceryl palmitostearate, hydrogenated vegetable oil (type I), magnesium oxide, magnesium stearate, mineral oil, poloxamer, polyethylene glycol, sodium lauryl sulfate, sodium stearate fumarate, stearic acid, talc and, zinc stearate, glyceryl behapate, magnesium lauryl sulfate, boric acid, sodium benzoate, sodium acetate, sodium benzoate/sodium acetate (in combination), DL- leucine.
[0171] Examples of silica flow conditioners include colloidal silicon dioxide, magnesium aluminum silicate and guar gum. Another most preferred silica flow conditioner consists of silicon dioxide.
[0172] Examples of stabilizing agents include acacia, albumin, polyvinyl alcohol, alginic acid, bentonite, dicalcium phosphate, carboxymethylcellulose, hydroxypropylcellulose, colloidal silicon dioxide, cyclodextrins, glyceryl monostearate, hydroxypropyl methylcellulose, magnesium trisilicate, magnesium aluminum silicate,
propylene glycol, propylene glycol alginate, sodium alginate, carnauba wax, xanthan gum, starch, stearate(s), stearic acid, stearic monoglyceride and stearyl alcohol.
[0173] The present invention also provides for modifications of peptides or peptide derivatives such that they are more stable once administered to a subject (i.e., once administered it has a longer half-life or longer period of effectiveness as compared to the unmodified form). Such modifications are well known to those skilled in the art to which this invention pertain (e.g., polyethylene glycol derivatization a.k.a. PEGylation, microencapsulation, etc).
[0174] The IL-lR/IL-lRacP antagonists or agonists of the present invention may be administered alone or in combination with other active agents useful for the treatment, prophylaxis or amelioration of symptoms of a IL-I, IL-lR/IL-lRacP associated disease or condition. Thus, the compositions and methods of the present invention can be used in combination with other agents exhibiting the ability to modulate IL-I activity (e.g., synthesis, release and/or binding to IL-lR/IL-lRacP) or to reduce the symptoms of an IL-I associated disease (e.g., rheumatoid arthritis and inflammatory bowel disease). Example of such agents include but are not limited to antirheumatic drugs such as chloroquine, auranofm (Ridaura™), dexamethasone, sodium aurothiomalate, methotrexate (see Lee et ah, 1988, Proc. Int. Acad. Sci, 85:1204), probucol (see Ku et al, 1988, Am. J. Cardiol. 62:778), pentoxyfylline (e.g., Sullivan et al, 1988, Infect. Immun. 56 :1722), disulfϊram (see Marx 1988, Science, 239:257), antioxidants such as nordihydroguaiaretic acid (lee et al, 1988, Int J. Immunopharm., 10:385), IL-I Trap (see e.g., 2003, Curr. Opin. Inv. Drugs, 4(5): 593-597), Anakinra (Kineret™, PCT Application WO00236152), leflunomide, corticosteroids (Medrol™, Deltasone™, Orasone™) as well as other agents such as those described in Bender and Lee (1989) Annual Reports in Medicinal Chemistry, chapter 20: Pharmacological Modulation of IL-1 : 185-193). Other drugs may also be used in combination with the compounds of the present invention like anti-inflammatory drugs such as Non Steroidal Antiinflammatory Drugs (NSAIDS, e.g., Rofecoxib (VIOXX™), Celecoxib (Celebrex™), Valdecoxib (Bextra™), Aspirin™, advil™), anti TNF-α drugs (Infliximab, etanercept, adalimumab), collagenase inhibitors and others. Of course a combination of two or more peptides, derivatives and peptide mimetics and their combination with one or more drug can also be used, in all combinations (e.g. one or more peptide with one or more mimetic, one or more mimetic with one or more derivative, one ore more peptide with one or more drug etc.).
[0175] The present invention is illustrated in further details by the following non- limiting examples. The examples are provided for illustration only and should not be construed as limiting the scope of the invention.
EXEMPLIFICATION
[0176] As depicted in the Examples below, in certain exemplary embodiments, compounds are prepared according to the following general procedures. It will be appreciated that, although the general methods depict the synthesis of certain compounds of the present invention, the following general methods, and other methods known to one of ordinary skill in the art, can be applied to all compounds and subclasses and species of each of these compounds, as described herein.
EXAMPLE 1 Synthesis of IL-IR antagonistic peptide 101.10 D-AgI analogs
(a) (R)-Agl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (54) (SEQ ID NO:61)
[0177] (i?)-Agl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (54) (SEQ ID NO:61) was prepared as described above, using microwave assisted annulation conditions B over 8 h, to give the desired lactam peptide TFA salt 59 (57 mg, 55% crude purity as analyzed by analytical RP-HPLC (UV 214), 2-40% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was then carried out by preparatory RP-HPLC (2-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired formic acid salt 54 (16 mg, 20%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 10.98 (0-60% MeCN in H2O, 0.1% FA, 30min gradient) and MeOH tR 15.30 (0-60% MeOH in H2O, 0.1% FA, 30min gradient) and revealed >99% purity. HRMS Calcd. for C36H57OnN8 [M+H]+ 777.4141, found 777.4138.
(b) D-Arg-(R)-Agl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (55) (SEQ ID NO:62)
[0178] D-Arg-(i?)-Agl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (55) (SEQ ID NO:62) was prepared as described above, using microwave assisted annulation conditions B over 10 h, to give the desired lactam peptide TFA salt 55 (99 mg, 41% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-20% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was then carried out by preparatory RP-HPLC (0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired formic acid salt 55 (22 mg, 15%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 8.26 (0-60% MeCN in H2O, 0.1% FA, 30 min gradient) and MeOH tR 9.36 (0-60% MeOH in H2O, 0.1% FA, 30min gradient) and revealed >99% purity. HRMS Calcd. for C3SH60O10N11 [M+H]+ 770.4519, found 770.4514.
(c) D-Arg-D-Tyr-(R)-Agl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (56) (SEQ ID NO:63)
[0179] D-Arg-D-Tyr-(i?)-Agl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (56) (SEQ ID NO:63) was prepared as described above, using microwave assisted annulation conditions B over 6 h, to give the desired lactam peptide TFA salt 56 (89 mg, 58% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40% MeCN in H2O, 0.1% FA, 20 min gradient). Purification was then carried out by preparatory RP-HPLC (0-40% MeCN in H2O, 0.1% FA, 30min gradient) to give the desired formic acid salt 56 (13 mg, 7%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 9.84 (0-60% MeCN in H2O, 0.1% FA, 30min gradient) and MeOH tR 12.65 (0-60% MeOH in
H2O, 0.1% FA, 30min gradient) and revealed >99% purity. HRMS Calcd. for C38H62OI0NI I [M+H]+ 832.4676, found 832.4676.
(d) D-Arg-D-Tyr-D-Thr-(R)-Agl-D-Glu-D-Leu-D-Ala-NH2 (57) (SEQ ID NO:64)
[0180] D-Arg-D-Tyr-D-Thr-(i?)-Agl-D-Glu-D-Leu-D-Ala-NH2 (57) (SEQ ID NO:64) was prepared as described above, using microwave assisted annulation conditions B over 4 h, to give the desired lactam peptide TFA salt 57 (79 mg, 50% crude purity as analyzed by analytical RP-HPLC (UV 214), 2-40% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was then carried out by preparatory RP-HPLC (2-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired formic acid salt 57 (21 mg, 11%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 9.19 (0-60% MeCN in H2O, 0.1% FA, 30 min gradient) and MeOH tR 11.15 (0-60% MeOH in H2O, 0.1% FA, 30 min gradient) and revealed >99% purity. HRMS Calcd. for C37H60Oi iNn [M+H]+ 833.4468, found 833.4459.
(e) D-Arg-D-Tyr-D-Thr-D-Val-(R)-Agl-D-Leu-D-Ala-NH2 (58) (SEQ ID NO:65)
[0181] D-Arg-D-Tyr-D-Thr-D-Val-(i?)-Agl-D-Leu-D-Ala-NH2 (58) (SEQ ID NO:65) was prepared as described above, using microwave assisted annulation conditions B over 4 h, to give the desired lactam peptide TFA salt 58 (157 mg, 36% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was then carried out by preparatory RP-HPLC (0-40% MeCN in H2O, 0.1% FA,
30 min gradient) to give the desired formic acid salt 58 (37 mg, 21%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 9.93 (0-60% MeCN in H2O, 0.1% FA, 30 min gradient) and MeOH tR 12.57 (0-60% MeOH in H2O, 0.1% FA, 30 min gradient) and revealed >99% purity. HRMS Calcd. for C37H62O9Nn [M+H]+ 803.4727, found 803.4725.
(f) D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(R)-Agl-D-Ala-NH2 (59) (SEQ ID NO:66)
[0182] D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(i?)-Agl-D-Ala-NH2 (59) (SEQ ID NO:66) was prepared as described above, using microwave assisted annulation conditions B over 3 h, to give the desired lactam peptide TFA salt 59 (70 mg, 81% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40% MeCN in H2O, 0.1% FA, 4 min gradient). Purification was then carried out by preparatory RP-HPLC (0-40% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired formic acid salt 59 (2.6 mg, 7%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN tR 8.52 (0-60% MeCN in H2O, 0.1% FA, 30 min gradient) and MeOH tR 9.91 (0-60% MeOH in H2O, 0.1% FA, 30 min gradient) and revealed >99% purity. HRMS Calcd. for C36H58OHNI I [M+H]+ 820.4312, found 820.4307.
EXAMPLE 2 Optimized protocol for (R)-BgI lactam peptide synthesis
[0183] (S)- and (i?)-Bgl 101.10 analogs were synthesized using optimized conditions.
Peptide synthesis was carried out in syringe tubes as described earlier. When the residue was reached for lactam synthesis, Fmoc deprotection was performed as usual and the resin was transferred into a 5 mL glass microwave vessel. A solution of cyclic sulfamidate (i?)-17 (5 eq.) and DIEA (1 eq.) in THF (2 mL) was added, the reactor was sealed and the mixture was irradiated under microwave at 600C for 1 h. The resin was then transferred into a 6 mL syringe tube, washed with DMF (3 times), MeOH (3 times), DCM (3 times), and with three
cycles comprising washing with 2% AcOH in DMSO for 30 min and washing with MeCN for 5 minutes. The resin was transferred back to a 5 mL glass microwave vessel, a DMS0:H20:Ac0H 75:23:2 (2 mL) was added, the reactor sealed and the mixture was irradiated under microwave at 1000C for 3 h. The resin was transferred back into a syringe tube and underwent an acetyl-capping step by treatment with a solution of acetic anhydride (5 eq.) in DMF (4 mL) in the presence of DIEA (5 eq.) for 1.5 h. The peptide synthesis was then continued as previously described.
(R)-Bab 101.10 analogs
EXAMPLE 3
(R)-Bab-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D- AIa-NH2 (71) (SEQ ID NO:67)
[0184] (i?)-Bab-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (71) (SEQ ID NO:67) was isolated while purifying compound 54, prepared as described above (28% of 54 crude mixture as analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm, 2-40% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was carried out by preparatory RP-HPLC (column A, 2-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired formic acid salt 71 (10 mg, 10%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 14.11 (5-40% MeCN in H2O, 0.1% FA, 15 min gradient) and MeOH tR 12.69 (20-80% MeOH in H2O, 0.1% FA, 15 min) and revealed >99% purity. HRMS Calcd. for C43H64Oi2N8 [M+H]+ 885.4714, found 885.4716.
EXAMPLE 4 D-Arg-(R)-Bab-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (72) (SEQ ID NO:68)
[0185] D-Arg-(i?)-Bab-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (72) (SEQ ID NO:68) was isolated while purifying compound 55, prepared as described above (45% of 55 crude mixture as analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm, 0-20% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was carried out by preparatory RP-HPLC (column A, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired formic acid salt 72 (27 mg, 15%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 9.04 (0-60% MeCN in H2O, 0.1% FA, 30 min gradient) and MeOH tR 11.00 (0-60% MeOH in H2O, 0.1% FA, 30 min) and revealed >99% purity. HRMS Calcd. for C40H68OiiNii [M+H]+ 878.5092, found 878.5094.
EXAMPLE 5 D- Arg-D-Tyr-(R)-Bab-D- Val-D-Glu-D-Leu-D- AIa-NH2 (73) (SEQ ID NO:69)
[0186] D-Arg-D-Tyr-D-Thr-(i?)-Bab-D-Glu-D-Leu-D-Ala-NH2 (73) (SEQ ID NO:69) was isolated while purifying compound 56, prepared as described above (27% of 56 crude mixture as analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm, 0-40% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was carried out by preparatory RP-HPLC
(column A, 0-40% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired formic acid salt 73 (7 mg, 3%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 9.12 (0-60% MeCN in H2O, 0.1% FA, 15 min gradient) and MeOH tR 9.45 (0-60% MeOH in H2O, 0.1% FA, 15 min) and revealed >99% purity. HRMS Calcd. for C45H70O11N11 [M+H]+ 940.5240, found 940.5251.
EXAMPLE 6 D- Arg-D-Tyr-D-Thr-(R)-Bab-D-Glu-D-Leu-D- AIa-NH2 (74) (SEQ ID NO:70)
[0187] D-Arg-D-Tyr-D-Thr-(i?)-Bab-D-Glu-D-Leu-D-Ala-NH2 (74) (SEQ ID NO:70) was isolated while purifying compound 57, prepared as described above (6% of 57 crude mixture as analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm, 2-40% MeCN in H2O, 0.1% FA, 15 min gradient). Purification was carried out by preparatory RP-HPLC (column A, 2-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired formic acid salt 74 (8.5 mg, 4%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 12.27 (5-40% MeCN in H2O, 0.1% FA, 15 min gradient) and MeOH tR 17.09 (5-40% MeOH in H2O, 0.1% FA, 15 min) and revealed >99% purity. HRMS Calcd. for C44H68Oi2Nn [M+H]+ 942.5027, found 942.5043.
(R)-BgI 101.10 scan compounds
EXAMPLE 7 (R)-Bgl-D-Tyr-D-Thr-D- VaI-D-GIu-D-LeU-D-AIa-NH2 (75) (SEQ ID NO:71)
[0188] (i?)-Bgl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (75) (SEQ ID NO:71) was prepared on a 0.072 mmol, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 75 (34 mg) in 71% crude purity as determined by analytical RP- HPLC (column b, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column B, 10-30% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 75 (13 mg, 22%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 11,8 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 16.41 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C36H57OnN8 [M+H]+ 777.4141, found 777.4145.
EXAMPLE 8 D- Arg-(R)-Bgl-D-Thr-D-Val-D-Glu-D-Leu-D- AIa-NH2 (76) (SEQ ID NO:72)
[0189] D-Arg-(i?)-Bgl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (76) (SEQ ID NO:72) was prepared on a 0.078 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 360 min, to give the desired lactam peptide TFA salt 76 (35 mg) in 87% crude purity as determined by analytical RP-
HPLC (column a, UV: 1 = 214 nm, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 2-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 76 (16 mg, 24%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 7.79 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 10.28 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C33H60OioNii [M+H]+ 770.4519, found 770.4521.
EXAMPLE 9 D- Arg-D-Tyr-(R)-Bgl-D- VaI-D-GIu-D-LeU-D-AIa-NH2 (77) (SEQ ID NO:73)
[0190] D-Arg-D-Tyr-(i?)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (77) (SEQ ID NO:73) was prepared on a 0.082 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 77 (34 mg) in 86% crude purity as determined by analytical RP- HPLC (column b, UV: 1 = 214 nm, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column B, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 77 (17 mg, 23%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 9.55 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 12.99 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C38H62OI0NI I [M+H]+ 832.4676, found 832.4677.
EXAMPLE 10 D-Arg-D-Tyr-D-Thr-(R)-Bgl-D-Glu-D-Leu-D-Ala-NH2 (78) (SEQ ID NO:74)
[0191] D-Arg-D-Tyr-D-Thr-(i?)-Bgl-D-Glu-D-Leu-D-Ala-NH2 (78) (SEQ ID NO:74) was prepared on a 0.087 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 420 min, to give the desired lactam peptide TFA salt 78 (62 mg) in 79% crude purity as determined by analytical RP- HPLC (column b, UV: 1 = 214 nm, 0-30% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column B, 18% MeCN in H2O, 0.1% FA, isocratic) to give the desired FA salt product 78 (16 mg, 17%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 8.00 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 9.93 (0- 80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C37H6oOiiNii [M+H]+ 834.4468, found 834.4470.
EXAMPLE 11 D-Arg-D-Tyr-D-Thr-D-Val-(R)-Bgl-D-Leu-D-Ala-NH2 (79) (SEQ ID NO:75)
[0192] D-Arg-D-Tyr-D-Thr-D-Val-(i?)-Bgl-D-Leu-D-Ala-NH2 (79) (SEQ ID NO:75) was prepared on a 0.098 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 79 (35 mg) in 87% crude purity as determined by analytical RP-
HPLC (column a, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 0-30% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 79 (6 mg, 7%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 9.67 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 13.18 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C37H6IO9Nn [M+Na]+ 826.4546, found 826.4544.
EXAMPLE 12 D- Arg-D-Tyr-D-Thr-D-Val-D-Glu-(R)-Bgl-D- AIa-NH2 (80) (SEQ ID NO:76)
[0193] D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(i?)-Bgl-D-Ala-NH2 (80) (SEQ ID NO:76) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 80 (35 mg) in 50% crude purity as determined by analytical RP- HPLC (column b, UV: 1 = 214 nm, 0-60% MeCN in H2O, 0.1% FA, 25 min gradient). Purification was carried out by preparative RP-HPLC (column B, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 80 (13 mg, 14%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 7.27 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 9.04 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C36H58OHNI I [M+H]+ 820.4312, found 820.4313.
(S)-BgI 101.10 scan compounds
EXAMPLE 13 (S)-Bgl-D-Tyr-D-Thr-D- VaI-D-GIu-D-LeU-D-AIa-NH2 (81) (SEQ ID NO:77)
[0194] (5)-Bgl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (81) (SEQ ID NO:77) was prepared on a 0.102 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 600 min, to give the desired lactam peptide TFA salt 81 (34 mg) in 70% crude purity as determined by analytical RP- HPLC (column a, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 10-30% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 81 (11 mg, 13%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 12.00 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 19.49 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C36H57OnN8 [M+H]+ 777.4141, found 777.4138.
EXAMPLE 14 D-Arg-(S)-Bgl-D-Thr-D- Val-D-Glu-D-Leu-D-Ala-NH2 (82) (SEQ ID NO:78)
[0195] D-Arg-(5)-Bgl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (82) (SEQ ID NO:78) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 600 min, to give the desired lactam peptide TFA salt 82 (33 mg) in 82% crude purity as determined by analytical RP-
HPLC (column a, UV: 1 = 214 nm, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 82 (13 mg, 16%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 7.14 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 8.62 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C33H60OioNii [M+H]+ 770.4519, found 770.4518.
EXAMPLE 15 D-Arg-D-Tyr-(S)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (83) (SEQ ID NO:79)
[0196] D-Arg-D-Tyr-(5)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (83) (SEQ ID NO:79) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 480 min, to give the desired lactam peptide TFA salt 83 (52 mg) in 60% crude purity as determined by analytical RP- HPLC (column a, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 5-15% MeCN in H2O, 0.1% FA, 50 min gradient) to give the desired FA salt product 83 (15 mg, 17%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 9.43 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 14.71 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C38H62OI0NI I [M+H]+ 832.4676, found 832.4674.
EXAMPLE 16 D-Arg-D-Tyr-D-Thr-(S)-Bgl-D-Glu-D-Leu-D-Ala-NH2 (84) (SEQ ID NO: 80)
[0197] D-Arg-D-Tyr-D-Thr-(S)-Bgl-D-Glu-D-Leu-D-Ala-NH2 (84) (SEQ ID NO:80) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 420 min, to give the desired lactam peptide TFA salt 84 (28 mg) in 87% crude purity as determined by analytical RP- HPLC (column a, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 0-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired FA salt product 84 (12 mg, 14%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 7.56 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 8.91 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C37H60O11N11 [M+H]+ 834.4468, found 834.4469.
EXAMPLE 17 D- Arg-D-Tyr-D-Thr-D-Val-(5)-Bgl-D-Leu-D- AIa-NH2 (85) (SEQ ID NO:81)
[0198] D-Arg-D-Tyr-D-Thr-D-Val-(5)-Bgl-D-Leu-D-Ala-NH2 (85) (SEQ ID NO:81) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 85 (40 mg) in 90% crude purity as determined by analytical RP-
HPLC (column a, UV: 1 = 214 nm, 0-80% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 85 (11 mg, 13%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 9.48 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 10.47 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C37H6IO9Nn [M+H]+ 804.4726, found 804.4724.
EXAMPLE 18 D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(5)-Bgl-D-Ala-NH2 (86) (SEQ ID NO: 82)
[0199] D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(5)-Bgl-D-Ala-NH2 (86) (SEQ ID NO:82) was prepared on a 0.105 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 86 (29 mg) in 96% crude purity as determined by analytical RP- HPLC (column a, UV: 1 = 214 nm, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 0-20% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 86 (10 mg, 11%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 7.6 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 8.9 (0-80% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C36H58OHNI I [M+H]+ 820.4131, found 820.4136.
(R)-BgI insertion 101.10 compounds
EXAMPLE 19 D- Arg-(S)-Bgl-D-Tyr-D-Thr-D- VaI-D-GIu-D-LeU-D-AIa-NH2 (87) (SEQ ID NO: 83)
[0200] D-Arg-(5)-Bgl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (87) (SEQ ID
NO:83) was prepared on a 0.048 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 600 min, to give the desired lactam peptide TFA salt 87 (27 mg) in 56% crude purity as determined by analytical RP-HPLC (column a, UV: 1 = 214 nm, 0-40% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 2-20% MeCN in H2O, 0.1% FA, 25 min gradient) to give the desired FA salt product 87 (9 mg, 18%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 10.23 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 15.99 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5152.
EXAMPLE 20 D- Arg-D-Tyr-D-(5)-Bgl-Thr-D- VaI-D-GIu-D-LeU-D-AIa-NH2 (88) (SEQ ID NO: 84)
[0201] D-Arg-D-Tyr-D-(5)-Bgl-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 (88) (SEQ ID
NO:84) was prepared on a 0.052 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 600 min, to give the
desired lactam peptide TFA salt 88 (6 mg) in 55% crude purity as determined by analytical RP-HPLC (column b, UV: 1 = 214 nm, 0-60% MeCN in H2O, 0.1% FA, 25 min gradient). Purification was carried out by preparative RP-HPLC (column B, 2-15% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 88 (3 mg, 6%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 9.22 (0-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 14.01 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5137.
EXAMPLE 21 D- Arg-D-Tyr-D-Thr-(5)-Bgl-D-Val-D-Glu-D-Leu-D- AIa-NH2 (89) (SEQ ID NO: 85)
[0202] D-Arg-D-Tyr-D-Thr-(5)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 (89) (SEQ ID
NO:85) was prepared on a 0.055 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 480 min, to give the desired lactam peptide TFA salt 89 (16 mg) in 71% crude purity as determined by analytical RP-HPLC (column a, UV: 1 = 214 nm, 0-60% MeCN in H2O, 0.1% FA, 25 min gradient). Purification was carried out by preparative RP-HPLC (column A, 2-20% MeCN in H2O, 0.1% FA, 20 min gradient) to give the desired FA salt product 89 (6 mg, 10%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 10.38 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 16.25 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5152.
EXAMPLE 22 D- Arg-D-Tyr-D-Thr-D-Val-(S)-Bgl-D-Glu-D-Leu-D- AIa-NH2 (90) (SEQ ID NO: 86)
[0203] D-Arg-D-Tyr-D-Thr-D-Val-(S)-Bgl-D-Glu-D-Leu-D-Ala-NH2 (90) (SEQ ID
NO:86) was prepared on a 0.058mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 420 min, to give the desired lactam peptide TFA salt 90 (7 mg) in 68% crude purity as determined by analytical RP-HPLC (column b, UV: 1 = 214 nm, 5-30% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column B, 5-15% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 90 (3 mg, 6%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 9.90 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 15.20 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5147.
EXAMPLE 23 D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(5)-Bgl-D-Leu-D-Ala-NH2 (91) (SEQ ID NO:87)
[0204] D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(5)-Bgl-D-Leu-D-Ala-NH2 (91) (SEQ ID
NO:87) was prepared on a 0.065 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the
desired lactam peptide TFA salt 91 (20 mg) in 37% crude purity as determined by analytical RP-HPLC (column b, UV: 1 = 214 nm, 2-30% MeCN in H2O, 0.1% FA, 25 min gradient). Purification was carried out by preparative RP-HPLC (column B, 5-15% MeCN in H2O, 0.1% FA, 25 min gradient) to give the desired FA salt product 91 (2 mg, 3%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column b, UV: 1 = 214 nm) using both MeCN tR 9.96 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 15.43 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5154.
EXAMPLE 24 D-Arg-D-Tyr-D-Thr-D- Val-D-Glu-D-Leu-(S)-Bgl-D-Ala-NH2 (92) (SEQ ID NO:88)
[0205] D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-(5)-Bgl-D-Ala-NH2 (92) (SEQ ID
NO: 88) was prepared on a 0.070 mmol scale, in a syringe tube following the optimized protocol as described above, using microwave assisted annulation over 240 min, to give the desired lactam peptide TFA salt 92 (27 mg) in 97% crude purity as determined by analytical RP-HPLC (column a, UV: 1 = 214 nm, 5-30% MeCN in H2O, 0.1% FA, 30 min gradient). Purification was carried out by preparative RP-HPLC (column A, 2-30% MeCN in H2O, 0.1% FA, 30 min gradient) to give the desired FA salt product 92 (13 mg, 18%) as a white fluffy solid. The purified product was analyzed by analytical RP-HPLC (column a, UV: 1 = 214 nm) using both MeCN tR 10.04 (5-60% MeCN in H2O, 0.1% FA, 25 min gradient) and MeOH tR 15.69 (0-60% MeOH in H2O, 0.1% FA, 25 min gradient) and revealed >99% purity. HRMS Calcd. m/z for C42H69Oi2Ni2 [M+H]+ 933.5152, found 933.5150.
EXAMPLE 25 [3H] thymidine incorporation for TF-I cell proliferation measurements
[0206] Human TF-I cells (5x104 cells/well) were cultured in complete RPMI medium
(GIBCO RPMI Medium 1640, Invitrogen) supplemented with GM-CSF (Granulocyte Macrophage Colony Stimulating Factor, 2 ng/ml; BD Biosource). Cells were deprived of growth factors for 18 h before preincubation with lactam peptide (1 μM) followed by treatment with IL- lβ (10 or 25 ng/niL). After 24 h incubation at 370C, [3H]thymidine (1 μCi/mL; Amersham) was added and the cells were incubated for another 24 h. Cells were harvested, washed two times with PBS (10 mM Na2HPO4, 2 mM KH2PO4, 137 mM NaCl, 2.7 mM KCl; pH 7.4) and lysed with a 0.1 N NaOH/ 0.1% Triton X-IOO solution. Scintillation cocktail (Fisher Scientific, 8 mL/sample) was added to the lysate, and after 3 h, radioactivity was measured (Beckman Multi-Purpose Scintillation Coulter Counter LS6500). Results were analyzed by one- or two-way ANOVA factoring for concentration or treatments. Postanova comparisons among means were performed using the Tukey-Framer method. Statistical significance was set at p < 0.05. Data are presented as mean ± SEM.
Inhibition of thymocytes TF-I proliferation by 101.10 lactam analogs 54-59
[0207] The efficacy of AgI peptides 54-59 was ascertained by measuring their influence on IL-I induced human thymocyte TF-I proliferation as assessed by incorporation of [3H]thymidine as previously described.
[0208] Among the analogs tested, five maintained some inhibitory effect on TF-I proliferation (Figure 1). Peptide 56 failed to block proliferation of TF-I cells treated with IL- 1. Relative to 101.10, lactams 59, 58, 57, and 55, all exhibited similar efficacy, suggesting that the balance between side chain removal and conformational constraint at positions 2 and 4-6 does not perturb activity. Replacement of the N-terminal D-Arg residue by (i?)-Agl in compound 54 led to 2.2 fold increase in efficacy compared to 101.10, suggesting that the Arg1 side chain may not be necessary for activity.
[0209] The efficacy of AgI peptides 75-78 as allosteric negative modulators of the IL-
1 receptor I was also ascertained by measuring their influence on IL-I induced human thymocyte TF-I proliferation as assessed by incorporation of [ HJthymidine (Figure 2).
[0210] Results show that all (7?)-Bab analogs tested exhibited an improvement in efficacy compared to 101.10, from a 2.4 fold (compound 78) to a 1.7 fold (compound 76) increase. Inhibition of TF-I proliferation obtained with compound 75 confirms that the Arg1 side chain does not seem to be necessary for activity. Reasons for the increase of efficacy observed with compounds 76-78 remains unclear and requires further investigation regarding the influence of features brought by a Bab residue, which, while not wishing to be limited by theory, may include the character of the aromatic ester and the increased conformational flexibility from insertion of an amino alkyl chain into the peptide backbone.
EXAMPLE 26
Synthesis of D-Arg-D-Tyr-(5)-Agl-D-Val-D-Glu-D-Leu-D- AIa-NH2 (93) (SEQ ID NO:89): lantern-resin comparison and synthesis of multiple lactam residues on SynPhase Lanterns
(a) Rink Amide-MBHA resin Swelling and Fmoc-deprotection
[0211] A 12 mL plastic filtration tube with polyethylene frit was charged with Rink
Amide-MBHA resin (200 mg, 0.134 mmol, 0.67 mmol/g) and DCM (7 mL). The tube was sealed and shaken for 0.5 h. The resin was then filtered and taken up in freshly prepared 20% piperidine in DMF solution (7 mL), shaken for 30 min, filtered, retreated with 20% piperidine/DMF solution (7 mL) and shaken for 30 min. A positive Kaiser colour test indicated qualitatively the presence of free amine.
Washing
[0212] Washing steps after coupling or deprotection steps were performed by successive agitations for 1 min and filtration from DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL).
Amino Acid couplings
[0213] A solution of N-(Fmoc)amino acid (3 equiv.), HBTU (3 equiv.) and DIEA (6 equiv.) in DMF (7 mL) was prepared in a small sample vial, stirred for 3 min and then added to the resin. The reaction mixture was shaken for 1 h with Fmoc-D-Ala, for 3 h with Fmoc-D- VaI, Fmoc-D-Thr(tBu), Fmoc-D-Tyr(tBu) and Fmoc-D-Arg(Pbf) and for 4 h with Fmoc-D-
Leu, Fmoc-D-Glu(tBu), at room temperature. The completeness of each coupling was verified by the Kaiser test on few resin beads. (Kaiser, E.; Colescott, R. L.; Bossinger C. D.; Cook P. I. Anal. Biochem. 1970, 34, 595.)
Silylation and Alkylation
[0214] After Fmoc protecting group removal, resin was dried in vacuo for at least 3 h.
The anhydrous resin, in a 12 mL plastic filtration tube with polyethylene frit, was flushed with argon, swollen in THF (7 mL), treated with BSA (5 equiv.), shaken for 6 h, filtered under argon and treated with a solution of sulfamidate (5 equiv.) in THF (7 mL). After shaking for 18 h at room temperature, the resin was filtered and washed under argon with THF (3 x 7 mL).
Microwave Assisted Annulation
[0215] A 2 mL glass microwave vial was charged with resin and a freshly prepared
1% AcOH/DMSO solution (2 mL). The vial was sealed, heated in the microwave at 110 0C (pressure 1 bar) for 6 h. The resin was then washed from the microwave vessel into a 12 mL plastic filtration tube with polyethylene frit.
Cleavage test
[0216] Monitoring of reaction progress was performed by LC-MS analyses of material cleaved from resin. Typically, a small resin sample (3-5 mg) was treated with a mixture of TFA/H2O/TES (1 mL, 95/2.5/2.5, v/v/v) for Ih and filtered. The filtrate was evaporated, dissolved in water and acetonitrile and examined by LC-MS.
Final Cleavage
[0217] The peptide was cleaved from the resin by shaking in TFA/H2O/TES (7 mL,
95/2.5/2.5, v/v/v) for 3 h. The resin was filtered and washed with TFA. The combined filtrate and washings were concentrated in vacuo. The resulting residue was dissolved in a minimum volume of TFA (~1 mL), transferred to a centrifuge tube and precipitated by the addition of ice-cold diethyl ether (40 mL). The peptide was separated by centrifugation and the diethyl ether was carefully decanted from the tube. The precipitated peptide was washed twice with cold diethyl ether. The resulting white solid was dissolved in water and freeze-dried to give a white powder that was purified by preparative RP-HPLC, using the specified conditions.
(b) Polystyrene Rink amide lanterns
[0218] D-Sized polystyrene Rink amide lanterns with a 35-μmol loading were used for the synthesis of 93 and 94 and A-sized polystyrene Rink amide lanterns with a 75-μmol loading were used for the synthesis of 95-97. A 20-mL sample vials with a cover in which seven 0,3 mm diameter holes were drilled was used and solutions were removed simply by reversing the flask.
Swelling and Fmoc-Deprotection
[0219] Swelling and Fmoc-deprotection steps were respectively performed by immersing lanterns for 30 min in DCM and in DMF/Pip (80/20, v/v) solution. A positive Kaiser colour test on a sliver of lantern indicated qualitatively the presence of free amine.
Washing
[0220] Washing steps after coupling and deprotection steps were performed by dipping the lanterns in DMF (3 x 3 min), MeOH (1 x 3 min) and DCM (3 x 3 min), successively.
Amino acid coupling
[0221] A DMF solution containing the Fmoc-protected amino acid (3 equiv.), HBTU
(3 equiv.), and DIEA (6 equiv.) were freshly prepared in a 20-mL flask and lanterns were immersed in the coupling solution for 3 h with Fmoc-D-Ala, Fmoc-D-Leu, Fmoc-D-Val, Fmoc-D-Tyr(tBu), Fmoc-D-Pro and Fmoc-D-Arg(Pbf) and for 4 h with Fmoc-D-Glu(tBu) and Fmoc-D-Thr(tBu), at room temperature. The completeness of each coupling was verified by a Kaiser test on a sliver of lantern.
Silylation and Alkylation
[0222] After Fmoc protecting group deprotection, lanterns were then dried in vacuo for at least 3 h. The anhydrous lanterns, in 2- or 5- mL glass microwave vials, were flushed with argon, suspended in THF, treated with a solution of sulfamidate (4 equiv.) and DIEA (0- 1.1 equiv) in THF and heated in the microwave at 60-70 0C for l-2h. The lanterns were washed under argon with THF. Alternately, the alkylation with sulfamidate was preceded by a treatment with BSA (5 equiv) in THF for 1-6 h.
Microwave Assisted Annulation
[0223] A 2- or 5-mL glass microwave vial was charged with lanterns and a freshly prepared solution of DMSO/AcOH (99:1, v/v) or DMSO/H2O/AcOH (75:23:2, v/v/v). The vial was sealed, heated in the microwave at 80 0C for 5-10 h. The lanterns were then washed as previously described.
Capping
[0224] After lactam annulation, a capping of the deletion sequence from incomplete sulfamidate alkylation was performed by immersing the lantern in a DMF solution of acetic anhydride (10 equiv.) and DIEA (10 equiv) for 1 h.
Cleavage test
[0225] Monitoring of reaction progress was performed by LC-MS analyses of material cleaved from lantern. Typically, a slice of lantern was treated with a mixture of TFA/H2O/TES (1 mL, 95/2.5/2.5, v/v/v) for Ih and filtered. The filtrate was evaporated, dissolved in water and acetonitrile and examined by LC-MS.
Peptide cleavage
[0226] The peptide was cleaved by immersing the lantern in TFA/H2O/TES (3 mL,
95/2.5/2.5, v/v/v) for 3 h. The cleavage cocktail was removed directly from the tubes, peptides were precipitated with ice-cold diethyl ether, centrifuged, and decanted. Precipitation, centrifugation, and decantation operations were repeated twice. The resulting white solid was dissolved in water (10 mL) and freeze-dried to give a white powder that was analysed for purity and purified by preparative RP-HPLC, using the specified conditions.
Discussion for Example 26
A comparative study was first made between Rink amide MBHA resin and Rink-amide SynPhase lantern as supports in the synthesis of lactam peptide 93, in which the D-Thr3 residue was replaced by (S)-AgI (Scheme 10). Assembly of the C-terminal peptide fragment (vela) was done by standard SPPS protocols. The amino terminal of the peptide was then alkylated with (45)-(Fmoc)oxathiazinane ester (S)-S, which along with its enantiomer (R)-S, were synthesized in solution from L- and D-Met as described above. Peptide alkylation was preceded by N-silylation of the peptide amine with N,O-bis(trimethylsilyl)acetamide (BSA) to minimize bis-alkylation. Lactam annulation was performed by microwave irradiation, the
Fmoc group was removed and the sequence was elongated to provide the supported, protected AgI peptide 93. Lactam peptide 93 was obtained by side-chain deprotection and cleavage from the resin and lantern upon treatment with TFA. The crude peptides were analyzed by RP-HPLC and comparable crude purity was obtained using resin and lantern (33% and 32%, respectively) indicating that AgI peptide synthesis was unaffected by the support. After cleavage from the resin, the main impurities in crude material 93 were the deletion sequence from incomplete sulfamidate alkylation (30%) and uncyclized product (17%). After cleavage from lantern, the main impurity was the acetylated (5)-Agl-vela peptide (39%) probably due to an undesired partial AgI Fmoc deprotection prior to treatment with the acetic anhydride. The residual amine capping was performed on lantern after lactam annulation to avoid complications from a deletion sequence due to incomplete sulfamidate alkylation.
Scheme 10
D-Arg-D-Tyr-(5)-Agl-D-Val-D-Glu-D-Leu-D-Ala-NH2
93 SEQ ID NO:89
[0227] The rytvela analog 93 was synthesized in parallel on color-tagged lanterns with the analog 94, in which the D-VaI4 residue was replaced by (S)- AgI. The C- and N- terminal peptide fragments were assembled by standard SPPS protocols. The alkylation with sulfamidate (S)-S was performed after treatment of the peptide lanterns with BSA for 1 h, and comparable results were obtained by overnight alkylation at room temperature and heating at 600C with microwave-irradiation for 1 h. Lactam annulation was accomplished in 1% AcOH
in DMSO with heating at 1100C under microwave irradiation for 6 h, or in an oil bath for longer times. As previously reported on resin conversion to lactam was cleaner using the microwave; however, irradiation at 1100C caused the lanterns to change morphology and degrade. Although lactam product could be recovered after cleavage from the altered lantern, it was observed that at 800C, annulation could be effected without melting lantern and good conversion was achieved after 1O h.
[0228] In light of the improved activity of the (K)-AgI1 and maintained potency of
(R)-AgI2 and (7?)- AgI4 analogs of rytvela, the combinations of (R)-Ag^-(R)- AgI2 and (R)- Agll-(R)- AgI4 in rytvela analogs 96 and 97 were explored. For comparison, the (R)- Ag^-D- Pro4 analog 95 was also synthesized. The three analogs were constructed using a split-and- pool approach on SynPhase-lanterns equipped with a Rink amide linker. The lanterns were equipped with coloured spindles as a visual tagging system. (7?)-Cyclic sulfamidate (R)-S was used to alkylate peptides bound to the lanterns suspended in THF at 600C for Ih of microwave irradiation. Monitoring the reaction progress by LC-MS analyses after TFA- mediated cleavage of a lantern slice, it was found that, in contrast to synthesis on resin, the silylation with BSA had little effect on the amount of bis-alkylation product formed on lantern and comparable percentages of alkylated peptides 100 and 101 (27-30% and 50-52%, respectively) were achieved. This prompted the investigation of peptide alkylation without a prior BSA treatment. Longer heating in the microwave (2h) at higher temperature (700C) and the addition of 1.1 equiv of DIEA to the sulfamidate solution increased the amount of 100 and 101 (>40% and >90%, respectively); however bis-alkylation of 98 was significant (50%).
[0229] Subsequently, the condition for lactam annulation on both 100 and 101 were optimized, and it was found that the addition of water to the DMSO (1% AcOH) solution gave, in both cases, quantitative lactam cyclization at 800C under microwave irradiation.
[0230] Investigating the feasibility of introducing a second lactam motif into the same peptide, alkylation and lactam annulation were performed using conditions previously effective for installing AgI residues: alkylation with (R)-S (4 equiv) in THF (0.1 M) with microwave irradiation for Ih at 700C; lactam formation in a solution of DMSO/ AcOHZH2O (75 : 2 : 23, v/v/v) with microwave irradiation for 10 h at 800C. These conditions gave respectively 50, 8 and 26% conversions to 107, 108, 109. The addition of a second (i?)-Agl residue presented a more difficult challenge than the first (i?)-Agl residue. Different conditions were pursued to improve conversion in the second alkylation step including
solvent, temperature and microwave irradiation time, without much success. The addition of 0.5 equiv of DIEA to the sulfamidate solution favoured alkylation. This amount of DIEA was chosen to avoid bis-alkylation, which was promoted with more base (1.1 equiv). Lactam formation by microwave irradiation at 800C, Fmoc-deprotection and cleavage gave the crude peptides, which were analyzed by RP-HPLC to have 55, 30 and 45% crude purity for 95, 96 and 97, respectively (Table 9 and Scheme 11).
[0231] The efficacy of AgI peptides 93 and 94 was ascertained by measuring their influence on IL-I induced human thymocyte TF-I proliferation as assessed by incorporation of [3H]thymidine as in Example 25. The percentages of proliferation of TF-I cells (150% and 132%, respectively) pre-treated with peptides 93 and 94 demonstrated that both these analogs lost inhibitory activity on TF-I proliferation exhibited by rytvela (69%).
Synthesis of (R)-Agl-D-Tyr-D-Thr-D-Val-(R)-Agl-D-Leu-D-Ala-NH2 (98) (SEQ ID NO:94)
[0232] (i?)-Agl-D-Tyr-D-Thr-D-Val-(i?)-Agl-D-Leu-D-Ala-NH2 (98) (SEQ ID
NO: 94) was prepared on an A- sized polystyrene Rink amide lantern as outlined in Example 26. The crude peptide purity (30%) was assessed by RP-HPLC-MS (UV 214), 5-90% MeOH in H2O, 0.1% FA, 20 min gradient, tR 13.76 min., MS calcd. for C35H54N8O9 [M+H]+ 731.4, found 731.2).
EXAMPLE 27 alpha-Amino-beta-hydroxy-gamma-lactams, constrained Serine and Threonine dipeptide mimics
Synthesis
(a) Synthesis ofN-(Fmoc)Oxiranylglycine reagent 106
106 107
[0233] From known compound 107, an adapted literature procedure was followed:
N-(Fmoc)Vinylglycine methyl ester
[0234] A 2,4-dichlorotoluene (30 mL) solution of JV-(Fmoc)Met(S=O)-OMe 107
(4.01g, 10.0 mmol) was heated to 191 0C for 2h under Argon. The unconcentrated crude was loaded directly onto a 6.5 cm diameter X 13 cm high pad of silica, which was eluted using a step gradient of 3→6→9→12→20→35→60% ethyl acetate: hexanes, 40OmL per step) yielding 2.81 g (84%) of N(Fmoc)Vinylglycine methyl ester.
N-(Fmoc)Oxiranylglycine methyl ester (106)
[0235] N-(Fmoc)Vinylglycine methyl ester (1.69g, 5.00 mmol) and m-CPBA
(commercial <77%, 5.6g, 25 mmol) were heated in 1 ,2-dichloroethane at 40 0C for 17h. The crude was filtered over a frit, concentrated and purified by flash chromatography (7.5 cm wide X 8.5 cm high silica pad, eluded by step gradient of 3→6→9→15→20→25% ethyl acetate: toluene, 400 mL per step) yielding 833 mg (47%) of JV-(Fmoc)oxiranylglycine methyl ester.
Representative procedure for the synthesis of β-hydroxy-a-amino-y-lactams
[0236] D-Phe-OMeΗCl (77.6 mg, 360 mmol) in dilute Na2CO3 was extrated with
CHCl3 (3 X 1 mL), dried over MgSO4, concentrated, and dried under high vacuum for a few hours to yield 40.8 mg (78%) of D-Phe-OMe. The free base (26.1 mg, 0.180 mmol) was immediately used in a reaction with JV-(Fmoc)oxiranylglycine methyl ester 106 (18.4 mg,
0.052 mmol) at 76 0C in 2,2,2-trifluoroethanol (0.3 niL) for 15h. The crude was concentrated in vacuo, and purified by flash chromatography (2.2 cm wide X 2 cm high silica pad, step gradient of 28→31→34→37→50→70% ethyl acetate: hexanes, 20 mL per step) yielding 21.9 mg (91%) product (Rfproduct = 0.2 with 60% ethyl acetate: hexanes eluent, Rfoxuanyigiycme = 0.55).
Spectroscopic Data
(a) (2S)- [(9H-Fluoren-9-ylmethoxycarbonylamino)] -oxiranyl-acetic acid methyl ester (106)
[0237] 1H NMR (400 MHz, CDCl3) δ 7.77 (d, J= 7.4 Hz, 2H), 7.60 (t, J= 6.7 Hz,
2H), 7.41 (t, J= 7.4 Hz, 2H), 7.32 (td, J= 7.2, 2.5 Hz, 2H), 5.35 (d, J= 9.0 Hz, IH), 4.74 (d, J= 8.9 Hz, IH), 4.43 (d, J= 7.1 Hz, 2H), 4.22 (t, J= 6.8 Hz, IH), 3.83 (s, 3H), 3.51-3.47 (m, IH), 2.79 (t, J= 4.3 Hz, IH), 2.63 (dd, J= 4.6, 2.6 Hz, IH). 13C NMR (75 MHz, CDCl3) 170.3, 156.3, 143.9, 143.7, 141.5i, 141.47, 127.9, 127.27, 127.26, 125.2, 120.2, 76.8, 67.4, 53.2, 51.3, 47.3, 44.0. HRMS(ESI+) for MH+ = C20H20NO5 +; calculated: 354.1336, found: 354.1331 (diff. m/z = 1.3 ppm).
(b) 2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- yl] -propionic acid benzyl ester (108)
[0238] 1H NMR (300 MHz, CDCl3) δ 7.78 (d, J= 7.3 Hz, 2H), 7.59 (d, J= 7.3 Hz,
2H), 7.46-7.29 (m, 9H), 5.70 (br s, IH), 5.16 (dd, J= 15.3, 12.2, 2H), 5.00-4.82 (m, 2H), 4.58-4.32 (m, 3H), 4.23 (t, J= 7.0 Hz, IH), 4.13 (pseudo t, J= 7.2 Hz, 1 H), 3.69 (t, J= 3.69 Hz, IH), 3.24 (t, J= 8.7 Hz, IH), 1.47 (d, J= 7.2 Hz, 3H). 13C NMR (75 MHz, CDCl3): δ (ppm) 170.6, 169.3, 158.2, 143.7, 141.5, 135.3, 128.9, 128.8, 128.4, 128.1, 127.3, 125.2, 120.3, 73.7, 67.9, 67.5, 60.7, 49.7, 47.6, 47.1, 15.1. HRMS (ESI+) for MH+ = C29H29N2O6 +; calculated: 501.2020, found: 501.2032 (error m/z = 2.4 ppm).
2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l-yl]-4-methyl- pentanoic acid methyl ester (109)
[0239] 1U NMR (400 MHz, CDCl3): δ (ppm) 7.77 (d, J= 7.5 Hz, 2H), 7.59 (d, J= 7.5
Hz, 2H), 7.41 (t, J= 7.5 Hz, 2H), 7.32 (t, J= 7.4 Hz), 5.77 (br s, IH), 4.88 (pseudo t, J= 8.2 Hz, IH), 4.44 (d, J= 7.1 Hz, 2H), 4.29 (q, J= 8.2 Hz, IH), 4.22 (t, J= 7.0 Hz, IH), 4.13 (d, J = 8.0 Hz, IH), 3.72 (s, IH), 3.56 (t, J= 8.8 Hz, IH), 3.38 (t. J= 9.0 Hz, IH), 1.83-1.35 (m, 3H), 1.01-0.87 (m, 6H). ESI+ for MH+ = C26H3IN2O6 + calculated and found: 467.2; for MNa+ = C26H30N2O6Na+ calculated and found: 489.2.
id) [3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- yl] -acetic acid benzyl ester (110)
[0240] 1H NMR (300 MHz, CDCl3): δ (ppm) 7.78 (d, J= 7.5 Hz, 2H), 7.59 (d, J= 7.4
Hz, 2H), 7.45-7.30 (m, 9H), 5.73 (s, IH), 5.18 (s, 2H), 4.97 (very br), 4.48-4.36 (m, 3H), 4.28-4.07 (m, 4H), 3.63 (dd, J= 9.4, 8.3 Hz, IH), 3.44 (dd, J= 9.3, 8.1 Hz, IH). ESI+ for MH+= C28H27N2O6 + calculated and found: 487.2. For MNa+ = C28H26N2O6Na+ calculated and found: 509.2.
(e) 2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- ylj -3 -phenyl-propionic acid methyl ester (111)
[0241] 1H NMR (300 MHz, CDCl3): δ (ppm) 7.74 (d, J= 7.5 Hz, 2H), 7.55 (d, J= 7.2
Hz, 2H),7.39 (t, J= 7.3 Hz, 2H), 7.33-7.13 (m, 7H), 5.68 (s, IH), 5.06 (dd, J= 11.4, 4.9 Hz, IH), 4.57-4.41 (m, IH), 4.37 (d, J= 7.1 Hz, 2H), 4.30 (q, J= 8.1 Hz, IH), 4.18 (t, J= 6.9 Hz, IH), 3.82 (dd, J= 8.0, 1.8 Hz, IH), 3.75 (s, 3H), 3.69 (dd, J= 9.0, 8.0 Hz, IH), 3.39 (dd, J=
14.7, 5.0 Hz, IH), 3.14 (t, J= 3.4 Hz, IH), 2.96 (dd, J= 14.7, 11.5, IH). 13C NMR (75 MHz, CDCl3): δ (ppm) 170.3, 169.6, 158.2, 143.64, 143.56, 141.5, 141.4, 135.9, 129.0, 128.6, 128.0, 127.4, 127.2s, 127.26, 125.I4, 125.I2, 120.2, 73.5, 67.8, 60.3, 55.1, 52.8, 48.0, 47.1, 35.4. ESI+ for C29H29N2O6 + calculated and found: 501.2. For C29H28N2O6Na+ calculated and found 523.2. HRMS (ESI+) for MH+ = C29H29N2O6 + calculated: 501.2020, found: 501.2027 (diff. m/z = 1.4 ppm).
(f) 2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- y I] -3 -methyl-butyric acid methyl ester (112)
[0242] 1H NMR (700 MHz, CDCl3): δ (ppm) 7.77 (d, J= 7.7 Hz, 2H), 7.59 (dd, J =
7.5, 4.0 Hz, 2H), 7.41 (t, J= 7.5 Hz, 2H), 7.33 (tt, J= 7.5, 1.1 Hz, 2H), 5.78 (s, IH), 5.02 (br s, IH), 4.52 (d, J= 9.5 Hz, IH), 4.44 (dd, J= 10.7, 7.1, IH), 4.42 (dd, J= 10.7, 7.1, IH), 4.36 (q, J= 8.0 Hz, IH), 4.23 (t, J= 7.1 Hz, IH), 4.14 (ddd, J= 8.1, 1.9, 1.0 Hz, IH), 4.03 (dd, J = 9.5, 8.0 Hz, IH), 3.73 (s, 3H), 3.25 (dd, J= 9.6, 8.2 Hz, IH), 2.23 (doublet of septuplets, J= 9.5, 6.7 Hz, IH), 0.99 (d, J= 6.7 Hz, 3H), 0.96 (d, J= 6.7 Hz, 3H). 13C NMR (100 MHz, CDCl3): δ (ppm) 170.6, 169.8, 158.2, 143.7, 143.6, 141.5, 128.0, 127.3, 125.1, 120.2, 73.6, 67.9, 60.5, 59.9, 52.3, 48.0, 47.1, 28.1, 19.4, 19.3 (diasteriotopic Me). HRMS (ESI+) for MH+ = C25H29N2O6 +; calculated 453.2020, found: 453.2028 (diff. m/z = 1.8 ppm).
(g) 2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- ylj -3 -(4-hydroxy-phenyl) -propionic acid methyl ester (113)
[0243] 1H NMR (300 MHz, CDCl3): δ (ppm) 7.77 (d, J= 7.6 Hz, 2H), 7.57 (d, J= 7.6
Hz, 2H), 7.41 (t, J= 7.6, 2H), 7.36 (br, IH), 7.32 (t, J= 6.8, 2H), 7.02 (d, J= 8.3 Hz, 2H), 6.70 (d, J= 8.4 Hz, 2H), 6.20 (very br s, IH), 5.63 (br s, IH), 5.09 (dd, J= 11.7, 4.8 Hz, IH), 4.45-2.48 (m, 3H), 4.20 (t, J= 6.9 Hz, IH), 3.92 (d, J= 8.3 Hz, IH), 3.77 (s, 3H), 3.83-3.68 (m, IH), 3.31 (dd, J= 11.5, 4.7 Hz, IH), 3.15 (t, J= 8.6 Hz, IH), 2.88 (t, J= 11.8 Hz, IH).
ESI+ for MH+= C29H29N2O7 + calculated and found: 517.2. For MNa+ = C29H28N2O7Na+ calculated: 539.2, found: 539.3.
(h) 2-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- yl] -3-(lH-indol-3-yl)-propionic acid methyl ester (114)
[0244] 1H NMR (300 MHz, CDCl3): δ (ppm) 8.17 (br s, IH), 7.77 (d, J= 7.7 Hz, 2H),
7.62-7.53 (m, 3H), 7.45-7.10 (m, 7H), 7.00 Hz (br s, IH), 5.65 (br s, IH), 5.18 (dd, J= 11.2, 4.7 Hz, IH), 4.82 (very br s, IH), 4.38-4.26 (m, 3H), 4.18 (t, J= 6.9 Hz, IH), 3.94 (dd, J = 8.2, 2.4 Hz, IH), 3.79 (s, 3H), 3.72 (t, J= 8.6 Hz, IH), 3.49 (dd, J= 15.5, 4.7 Hz, IH), 3.27- 3.14 (m, 2H). 13C NMR (75.5 MHz, CDC13): δ (ppm) 170.7, 169.7, 158.1, 143.7, 143.6, 141.46, 141.44, 136.3, 128.0, 127.3, 127.1, 125.1, 122.6, 122.0, 120.2, 119.9, 118.4, 111.5, 110.5, 73.5, 67.8, 60.4, 54.4, 52.8, 47.8, 47.1, 25.5. HRMS (ESI+) for MH+ = C3IH30N3O6 +; calculated: 540.2129, found: 540.2141 (diff. m/z = 2.2 ppm).
(i) 3-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- yl] -propionic acid benzyl ester (115)
[0245] 1H NMR (300 MHz, CDCl3): δ (ppm) 7.78 (d, J= 7.5 Hz, 2H), 7.59 (d, J= 7.3
Hz, 2H), 7.45-7.29 (m, 9H), 5.68 (br s, IH), 5.13 (s, 2H), 4.87 (br s, IH), 4.44 (d, J= 6.8 Hz, IH), 4.31-4.19 (m, 2H), 4.00 (d, J= 8.0 Hz, IH), 3.79-3.67 (m, IH), 3.62-3.46 (m, 2H), 3.28 (t, J= 8.8 Hz, IH), 2.63 (t, J= 6.6 Hz, 2H). 13C NMR (300 MHz, CDCl3): δ (ppm) 171.1, 168.9, 158.2, 143.7, 143.6, 141.48, 141.47, 135.6, 128.8, 128.6, 128.0, 127.27, 127.26, 125.I4, 125.I1, 120.24, 120.22, 73.5, 67.8, 67.0, 60.8, 50.9, 47.1, 39.0, 32.5. HRMS (ESI+) for MH+ = C29H29N2O6 +; calculated: 501.2020, found: 501.2032 (diff. m/z = 2.3).
(j) 3-[3-(9H-Fluoren-9-ylmethoxycarbonylamino)-4-hydroxy-2-oxo-pyrrolidin-l- ylj -benzoic acid methyl ester (116)
[0246] 1U NMR (300 MHz, CDCl3): δ (ppm) 8.15 (pseudo t, J= 1.9 Hz, IH), 7.94
(ddd, J= 8.1, 2.4, 1.0 Hz, IH), 7.89 (dt, J= 7.9, 1.3 Hz, IH), 7.78 (d, J= 7.6 Hz, 2H), 7.61 (d, J= 7.5 Hz, 2H), 7.48 (t, J= 8.0 Hz, IH), 7,43 (t, J= 7.3 Hz, 2H), 7.34 (td, J= 7.5, 1.2 Hz, 2H), 5.84 (br s, IH), 5.09 (br s, IH), 4.54-4.42 (m, 3H), 4.31-4.21 (m, 2H), 4.08 (dd, J= 9.8, 8.1 Hz, IH), 3.94 (s, 3H), 3.79 (dd, J= 9.6, 8.3 Hz, IH). ESI+ for MH+= C27H25N2O6 +; calculated and found: 473.2. For MNa+ = C27H24N2O6Na+; calculated and found: 495.2.
Discussion
[0247] Enantiomerically pure (25',3i?)-Λ/-(Cbz)-oxiranylglycine was prepared from L-
Met according to literature procedures and examined in reactions with AIa-OBn. In acetonitrile at 900C, the desired sequential alkylation / lactam formation occurred producing target β-hydroxy-α-amino-γ-lactam, albeit in 30% yield. The utility of Fmoc protection in peptide synthesis compelled further examination using JV-(Fmoc)oxiranylglycine 106, which was prepared in an analogous manner from L-Met. Epoxide 106 reacted with AIa-OBn to produce lactam 108 in 10% yield. Little improvement was obtained in attempts to yield lactam 108 using Lewis and Brønsted acid catalysts. In the reaction between N- (Fmoc)Oxiranylglycine 106 and different amino acid analogs, 2,2,2-trifluoroethanol (TFE) as solvent proved optimum.
[0248] For example, substrates with sterically demanding side chains such as the methyl esters of Phe, VaI and Trp, reacted well with 106. In the case of GIy-OBn, lower reaction temperatures mitigated losses from Fmoc deprotection. The nucleophilic phenol of unprotected Tyr-OMe was tolerated, however the ester-protected glutamate side competed for lactamization producing N-alkyl pyroglutamate. In addition to proteinogenic examples, the methyl ester of aminobenzoic acid as well as the benzyl ester of beta-Ala gave respectively 58 and 67% yield.
[0249] The stereogenic carbons in these dipeptide mimics are derived from the chiral pool with diasteroselective induction to set the 3 -hydroxy center by way of selective epoxidation of vinylglycine. The oxiranylglycine diasteriomers 106 were separable, allowing all possible sterioisomers to be obtained by choice of chirality in the starting material.
Preparation of β-hydroxy-α-amino-γ-lactam peptides on polystyrene Rink amide lantern
Synthesis ofrytvela β-hydroxy-a-amino-y-lactam analogue
D- Arg-D-Tyr-Agl(4-OH)-D- Val-D-Glu-D-Leu-D-Ala-NH2 (99) (SEQ ID NO:95)
[0250] D-Arg-D-Tyr-Agl(4-OH)-D-Val-D-Glu-D-Leu-D-Ala-NH2 (99) (SEQ ID
NO:95) was prepared on an A-sized polystyrene Rink amide lantern as outlined in Example 25 except the sulfamidate alkylation step was substituted by the following:
[0251] After Fmoc protecting group deprotection, the lanterns were treated with an oxiranylglycine 106 (3 equiv.) in 2,2,2-trifluoroethanol (0.06 M) and heated to 80 0C under microwave irradiation for 12h. Lantern washing and subsequent elongation was done as described, providing the desired lactam peptide as the TFA salt 99 (50% crude purity by analytical RP-HPLC-MS (UV 214), 5-80% MeOH in H2O, 0.1% FA, 20 min gradient, tR 8.45 min., MS calcd. for C38H62OHNI I [M+H]+ 848.4, found 848.6.).
[0252] Alternatively, the hydroxylactam dipeptidyl esters may be hydrolyzed and used as dipeptide building blocks in standard peptide synthesis.
[0253] These scaffolds may find application in medicinal chemistry, especially because the hydroxy and protected amino groups are ideally suited for orthogonally elaborating these structures further. In the context of solid supported peptide synthesis, elaboration of the hydroxy group would allow for mimicry of other constrained amino acid residues, by the attachment of carbohydrates, phosphonate, sulfate and other ester and ether types.
EXAMPLE 28 Solid-Phase Synthesis of Indolizidinone Analogs of API- 101.10
Rink Amide Resin swelling and deprotection
[0254] A 12 niL plastic filtration tube with polyethylene frit was charged with Rink resin (300 mg, 0.09 mmol, 0.3 mmol/g) and DMF (7 rnL). The tube was sealed and shaken for 0.5 h. The resin was then filtered and taken up in freshly prepared 20% piperidine in DMF solution (7 mL), shaken for 30 min, filtered, retreated with 20% piperidine/DMF solution (7 mL) and shaken for 30 min. The resin was washed by successive agitations for 1 min and filtered from DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL). A positive Kaiser colour test indicated qualitatively the presence of free amine.
Amino Acid couplings
Fmoc-I2aa-OH
[0255] The resin was first swollen in DMF (7 mL) for 15 min. Meanwhile, a solution of N-(Fmoc)amino acid (Fmoc-Xaa-OH, 3 equiv.), HBTU (3 equiv.) and DIEA (6 equiv.) in DMF (7 mL) was prepared in a small sample vial, stirred for 10 min and then added to the resin. The reaction mixture was shaken for 8 h with Fmoc-D-Leu-OH, 12 h with Fmoc-D- GIu(1Bu)-OH and Fmoc-D-Gln(Trt)-OH, 18 h with Fmoc-I2aa-OH, 10 h with Fmoc-D- Tyr(lBu)-OH, 11 h with Fmoc-D-Orn(Boc)-OH, HOOC(CH2)5NH(Boc) and HOOC(CH2)4NH(Fmoc), at room temperature. The resin was then filtered and respectively washed by shaking for 1 min with DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL). A negative Kaiser test response indicated completion of the reaction. The resin was then dried in vacuo.
Silylation and Alkylation (for peptides WCl 44 and WCl 45)
6-membered cyclic D-sulfamidate (TV-(Fmoc)oxathiazinane)
[0256] After swelling the resin, the Fmoc protecting group was removed as described above. The resin was then dried in vacuo for at least 3 h. The anhydrous resin, in a 12 mL plastic filtration tube with polyethylene frit, was then flushed with argon, swollen in THF (7 mL), treated with BSA (5 equiv.), shaken for 16 h, filtered under argon and treated with a solution of sulfamidate (5 equiv.) in THF (7 mL). After shaking for 24 h, the resin was filtered and washed under argon with THF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL) and dried in vacuo.
Microwave Assisted Annulation (for peptides WC 144 and WC 145)
[0257] A 2 mL glass microwave vial was charged with resin and either DMF (2 mL) or a freshly prepared 1% acetic acid/DMSO solution (2 mL). The vial was sealed, heated in the microwave at 100 0C (pressure 1 bar) for 3 h and then cooled using a jet of air. The resin was then washed from the microwave vessel into a 12 mL plastic filtration tube with polyethylene frit and washed by shaking for 1 min with DMF (3 χ 7 mL), MeOH (3 χ 7 mL) and DCM (3 χ 7 mL) and then dried in vacuo.
Alkylation (for peptides WC 146 and WC 147)
5-membered cyclic L-sulfamidate (/V-(Fmoc)oxathiazolidine)
[0258] The resin was swollen in DMF (4 rnL) for 20 min and filtered. A 20% piperidine solution in DMF (4 mL) was added and the suspension was shaken for 20 min and filtered. This operation was repeated and the resin was washed with DMF (3 x 3 mL), MeOH (3 x 3 mL) and DCM (3 x 3 mL). At this point the Kaiser test gave a positive response.
[0259] The peptidyl resin was then transferred into a dry 2 mL microwave vessel. A solution of freshly prepared sulfamidate in THF (1.5 mL) was added under argon, followed by DIEA. The mixture was then heated under microwave irradiation at 60 0C for 2.5 hours. The resin was washed with DCM (3 x 6 mL), MeOH (3 x 6 mL) and DCM (3 x mL).
Microwave Assisted Annulation (for peptides WCl 46 and WC147)
[0260] A 2 mL glass microwave vial was charged with resin and a mixture of
DMSO/H2O/AcOH (75:23:2, 2 mL). The vial was sealed, heated in the microwave at 100 0C (pressure 1 bar) for 4h and then cooled using a jet of air. The resin was then washed from the microwave vessel into a 12 mL plastic filtration tube with polyethylene frit and washed by shaking for 1 min with DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL) and then dried in vacuo.
Resin Capping
[0261] The resin was swollen in a solution of άi-tert-hvXyl dicarbonate (5 equiv.) in
DMF (7 mL), treated with DIEA (10 equiv.), shaken for 1 h, filtered and washed by shaking for 1 min with DMF (3 x 7 mL), MeOH (3 x 7 mL) and DCM (3 x 7 mL) and then dried in vacuo.
Peptide Cleavage
[0262] The resin was first swollen in a plastic filtration tube with polyethylene frit, as described for Fmoc removal above, treated with a freshly prepared 20% piperidine / DMF solution (7 mL), shaken for 15 min, filtered, treated with a second portion of 20%
piperidine/DMF solution (7 niL) and shaken for 15 min. The resin was then filtered and washed by shaking for 1 min with DMF (3 x 7 rnL), MeOH (3 x 7 rnL) and DCM (3 x 7 rnL). A positive Kaiser colour test indicated qualitatively the presence of free amine. The peptide was then cleaved from the resin by shaking in TFA/H2O/TES (7 mL, 95/2.5/2.5, v/v/v) for 2 h. The resin was filtered, washed with TFA (7 mL) and the combined filtrate and washings were concentrated in vacuo. The resulting residue was dissolved in a minimum volume of TFA (~1 mL), transferred to a centrifuge tube and precipitated by the addition of ice-cold diethyl ether (40 mL). The peptide was then centrifuged and the diethyl ether was carefully decanted from the tube. The treatment of the precipitated peptide with cold diethyl ether wash was repeated twice. The resulting white solid was dissolved in water (10 mL) and freeze-dried to give a white foam that was purified by preparatory RP-HPLC, using the specified conditions.
D-Orn-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC115) (SEQ ID NO:96)
[0263] D-Orn-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC115) (SEQ ID NO:96) was prepared as described above to give the desired peptide TFA salt (38 mg, 71% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC115 (11.5 mg, 21%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 13.57 (2-40 MeCN, 20 min gradient) and MeOH TR 14.99 (10-60 MeOH, 20 min gradient) and revealed >99% purity. HRMS Calcd. for C34H52O9N8 [M+H]+ 717.3930, found 717.3936.
H2N(CH2)4CO-D-Tyr-faa-D-Glu-D-Leu-NH2 (WC116) (SEQ ID NO 97)
[0264] H2N(CH2)4CO-D-Tyr-raa-D-Glu-D-Leu-NH2 (WC 116) (SEQ ID NO:97) was prepared as described above to give the desired peptide TFA salt (15 mg, 47% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 25 min gradient) to give the desired formic acid salt WC116 (5.3 mg, 10%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.43 (2-40 MeCN, 20 min gradient) and MeOH TR 19.39 (10-60 MeOH, 20 min gradient) and revealed >99% purity. HRMS Calcd. for C34H52O9N7 [M+H]+ 702.3821, found 702.3827.
H2N(CH2)SCO -D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC117) (SEQ ID NO 98)
[0265] H2N(CH2)5CO-D-Tyr-raa-D-Glu-D-Leu-NH2 (WC 117) (SEQ ID NO:98) was prepared as described above to give the desired peptide TFA salt (23.4 mg, 44% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-30 MeCN, 20 min gradient) to give the desired formic acid salt WC117 (9.8 mg, 18%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.80 (2-40 MeCN, 20 min gradient) and MeOH TR 17.95 (10-60 MeOH, 20 min gradient) and revealed >99% purity. HRMS Calcd. for C35H54O9N7 [M+H]+ 716.3978, found 716.3980.
H2N(CH2)4CO-D-Tyr-faa-D-Gln-D-Leu-NH2 (WC125) (SEQ ID NO 99)
[0266] H2N(CH2)4CO-D-Tyr-raa-D-Gln-D-Leu-NH2 (WC 125) (SEQ ID NO:99) was prepared as described above to give the desired peptide TFA salt (33.0 mg, 62% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 20 min gradient) to give the desired formic acid salt WC125 (10.7 mg, 20%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.21 (0-40 MeCN, 25min gradient) and MeOH TR 17.95 (0-80 MeOH, 25 min gradient) and revealed >97% purity. HRMS Calcd. for C34H53O8N8 [M+H]+ 701.3981, found 701.3979.
H2N(CH2)SCO -D-Tyr-I2aa-D-Gln-D-Leu-NH2 (WC 126) (SEQ ID NO 100)
[0267] H2N(CH2)5CO-D-Tyr-I2 aa-D-Gln-D-Leu-NH2 (WC 126) (SEQ ID NO : 100) was prepared as described above to give the desired peptide TFA salt (38.0 mg, 71% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC126 (11.0 mg, 20%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 15.37 (0-40 MeCN, 25min gradient) and MeOH TR 18.38 (0-60 MeOH, 25 min gradient) and revealed >99% purity. HRMS Calcd. for C35H55O8N8 [M+H]+ 715.4137, found 715.4156.
D-Orn-D-Tyr-I2aa-D-Gln-D-Leu-NH2 (WC 127) (SEQ ID NO: 101)
[0268] D-Orn-D-Tyr-I2aa-D-Gln-D-Leu-NH2 (WC 127) (SEQ ID NO: 101) was prepared as described above to give the desired peptide TFA salt (45.0 mg, 84% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (5-40 MeCN, 15 min gradient) to give the desired formic acid salt WC 127 (8.7 mg, 17%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 14.71 (0-60 MeCN, 20 min gradient) and MeOH TR 11.12 (0-60 MeOH, 25 min gradient) and revealed >99% purity. HRMS Calcd. for C34H54O8N9 [M+H]+ 716.4090, found 716.4089.
D-Agl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 144) (SEQ ID NO: 102)
[0269] D-Agl-D-Tyr-raa-D-Glu-D-Leu-NH2 (WC 144) (SEQ ID NO: 102) was prepared as described above to give the desired peptide TFA salt (34.0 mg, 44% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC144 (4.4 mg, 6%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.47 (2-40 MeCN, 25 min gradient) and MeOH TR 19.14 (0-60 MeOH, 25 min gradient) and revealed >96% purity. HRMS Calcd. for C33H48O9N7 [M+H]+ 686.3508, found 686.3512.
Agl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 145) (SEQ ID NO: 103)
[0270] Agl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 145) (SEQ ID NO: 103) was prepared as described above to give the desired peptide TFA salt (30.0 mg, 39% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC 145 (5.0 mg, 6%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.18 (2-40 MeCN, 25 min gradient) and MeOH TR 18.73 (0-60 MeOH, 25 min gradient) and revealed >99% purity. HRMS Calcd. for C33H48O9N7 [M+H]+ 686.3508, found 686.3514.
D-Bgl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 146) (SEQ ID NO: 104)
[0271] D-Bgl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC146) (SEQ ID NO: 104) was prepared as described above to give the desired peptide TFA salt (37.0 mg, 48% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC146 (10.5 mg, 13%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 15.85 (2-40 MeCN, 25 min gradient) and MeOH TR 18.80 (0-60 MeOH, 25 min gradient) and revealed >98% purity. HRMS Calcd. for C33H48O9N7 [M+H]+ 686.3508, found 686.3514.
Bgl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 147) (SEQ ID NO: 105)
[0272] Bgl-D-Tyr-I2aa-D-Glu-D-Leu-NH2 (WC 147) (SEQ ID NO: 105) was prepared as described above to give the desired peptide TFA salt (37.0 mg, 48% crude purity as analyzed by analytical RP-HPLC (UV 214), 0-40 MeCN, 8 min gradient). Purification was then carried out by preparatory RP-HPLC (2-40 MeCN, 25 min gradient) to give the desired formic acid salt WC147 (9.8 mg, 13%) as a white foam. The purified product was analyzed by analytical RP-HPLC (UV 214) using both MeCN TR 16.04 (2-40 MeCN, 25 min gradient) and MeOH TR 18.83 (0-60 MeOH, 25 min gradient) and revealed >99% purity. HRMS Calcd. for C33H48O9N7 [M+H]+ 686.3508, found 686.3508.
[0273] While we have described a number of embodiments of this invention, it is apparent that our basic examples may be altered to provide other embodiments that utilize the compounds and methods of this invention. Therefore, it will be appreciated that the scope of this invention is to be defined by the appended claims rather than by the specific embodiments that have been represented by way of example. The present application also refers to a number of publications or other documents, the contents of all of which are incorporated by reference herein in their entireties.
[0274] We claim:
Claims
1. A peptidomimetic comprising one or more lactams and/or Bab residues and at least four out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least four amino acids maintain their relative positions as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP).
2. A peptidomimetic comprising one or more lactams and/or Bab residues and at least four out of seven contiguous amino acids that appear in an extracellular region of the IL-I receptor (SEQ ID NO:1) or IL-I receptor accessory protein (IL-lRacP) (SEQ ID NO:2), wherein the at least four amino acids maintain their relative positions, but in the inverse configuration, as they appear in the extracellular region of the IL-I receptor or IL-I receptor accessory protein (IL-lRacP).
3. The peptidomimetic of claim 1 or 2, wherein the one or more lactams and/or Bab residues replace one or more amino acids of the seven contiguous amino acids.
4. The peptidomimetic of claim 1 or 2, wherein the one or more lactams and/or Bab residues are inserted at the N-terminus, C-terminus or internally.
5. A peptidomimetic comprising one or more lactams and/or Bab residues and at least four amino acids from any peptide selected from Table 1 (SEQ ID NOs: 3 -40), wherein the at least four amino acids maintain their relevant positions as they appear in said peptide.
6. A peptidomimetic comprising one or more lactams and/or Bab residues and at least four amino acids from RYTVELA (SEQ ID NO: 12), wherein the at least four amino acids maintain their relevant positions as they appear in RYTVELA (SEQ ID NO: 12).
7. The peptidomimetic of claim 6, comprising one or more lactams.
8. The peptidomimetic of claim 7, wherein the one or more lactams replace one or more amino acids of RYTVELA (SEQ ID NO: 12).
9. The peptidomimetic of claim 7, wherein the one or more lactams are inserted at the N- terminus, C-terminus or internally.
10. The peptidomimetic of any one of the preceding claims, wherein at least one of the one or more lactams is of formula (I):
(I)
wherein:
each Rx is independently -R, halogen, -OR, -SR, -N(R)2, -CN, -NO2, -C(O)R, -CO2R, - C(O)N(R)2, -C(O)C(O)R, -C(O)CH2C(O)R, -S(O)R, -SO2R, -SO2N(R)2, -NRC(O)R, - NRC(O)N(R)2, -NRSO2R, -NRSO2N(R)2, -N(R)N(R)2, -C=NN(R)2, -C=NOR, -OC(O)R, or -OC(O)N(R)2;
each R is independently hydrogen or an optionally substituted group selected from Ci_6 aliphatic; phenyl; a 3- to 7-membered saturated or partially unsaturated carbocyclic ring; a 5- to 6-membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or a 4- to 7-membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or
two R groups attached to the same nitrogen atom may be taken together with their intervening atoms to form a 4- to 7- membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independent selected from nitrogen, oxygen, and sulfur;
m is O, 1, or 2; and
n is O, 1, 2, or 3.
11. The peptidomimetic of claim 10, wherein m is O.
12. The peptidomimetic of claim 10, wherein n is 1.
13. The peptidomimetic of claim 10, wherein the at least one of the one or more lactams is alpha-amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), and/or beta-hydroxy- alpha-amino-gamma-lactam (Agl(4-OH)).
14. The peptidomimetic of any one of the preceding claims, wherein at least one of the one or more lactams is of formula (II):
(H)
wherein:
each Ry is independently -R, halogen, -OR, -SR, -N(R)2, -CN, -NO2, -C(O)R, -CO2R, - C(O)N(R)2, -C(O)C(O)R, -C(O)CH2C(O)R, -S(O)R, -SO2R, -SO2N(R)2, -NRC(O)R, - NRC(O)N(R)2, -NRSO2R, -NRSO2N(R)2, -N(R)N(R)2, -C=NN(R)2, -C=NOR, -OC(O)R, or -OC(O)N(R)2;
each R is independently hydrogen or an optionally substituted group selected from Ci_6 aliphatic; phenyl; a 3- to 7-membered saturated or partially unsaturated carbocyclic ring; a 5- to 6-membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or a 4- to 7-membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur; or
two R groups attached to the same nitrogen atom may be taken together with their intervening atoms to form a 4- to 7- membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independent selected from nitrogen, oxygen, and sulfur;
p is O, 1, or 2; and
each q is independently O, 1, 2, or 3.
15. The peptidomimetic of claim 14, wherein p is 0.
16. The peptidomimetic of claim 14, wherein each q is 1 or 2.
17. The peptidomimetic of claim 14, wherein the at least one of the one or more lactams is indolizidin-2-one amino acid (I2aa), indolizidin-9-one amino acid (I9aa), and/or quinolizidinone amino acid(Qaa).
18. The peptidomimetic of claim 14, wherein the at least one of the one or more lactams is indolizidin-2-one amino acid (I2aa).
19. The peptidomimetic of claim 6, comprising one or more Bab residues.
20. The peptidomimetic of claim 19, wherein the one or more Bab residues replace one or more amino acids of RYTVELA (SEQ ID NO: 12).
21. The peptidomimetic of any one of the preceding claims, comprising at least one D- amino acid.
22. The peptidomimetic of claim 21, wherein all amino acids in the peptidomimetic are D-amino acids.
23. A peptidomimetic modified from any one of SEQ ID NO:3-40, wherein the peptidomimetic comprises at least four amino acids from the corresponding peptide sequence and a lactam replacement or insertion.
24. The peptidomimetic of claim 23, wherein the at least four amino acids maintain their relative positions as they appear in the corresponding sequence.
25. The peptidomimetic of claim 23 or 24, wherein the lactam is selected from the group consisting of alpha-amino-gamma-lactam (AgI), beta-amino-gamma-lactam (BgI), beta- hydroxy-alpha-amino-gamma-lactam (Agl(4-OH)), indolizidin-2-one amino acid (I2aa), and combination thereof.
26. A peptidomimetic modified from any one of SEQ ID NO:3-40, wherein the peptidomimetic comprises at least four amino acids from the corresponding peptide sequence and a Bab replacement or insertion.
27. The peptidomimetic of claim 26, wherein the at least four amino acids maintain their relative positions as they appear in the corresponding sequence.
28. A peptidomimetic comprising any one of SEQ ID NO:61-105.
29. The peptidomimetic of any one of the preceding claims, wherein the peptidomimetic further comprises one or more modifications to increase protease resistance, serum stability and/or bioavailability.
30. The peptidomimetic of claim 29, wherein the one or more modifications are selected from N- and/or C-terminal acetylation, glycosylation, biotinylation, amidation, substitution with D-amino acid, or un-natural amino acid, and/or cyclization of the peptide.
31. A method of inhibiting the activity of an IL- 1 receptor in a cell, the method comprising contacting the cell with a peptidomimetic of any one of the preceding claims.
32. A method of treating an IL-I related disease, disorder or condition, the method comprising administering to a subject in need of treatment a peptidomimetic of any one of claims 1 through 30.
33. The method of claim 32, wherein the IL-I related disease, disorder or condition is an inflammatory disease, disorder or condition.
34. The method of claim 33, wherein the inflammatory disease, disorder or condition is selected from rheumatoid arthritis, inflammatory bowel disease, septic shock, osteoarthritis, psoriasis, encephalitis, glomerulonephritis, respiratory distress syndrome, Reiter's syndrome, systemic lupus erythematosus, scleroderma, Crohn's disease, ulcerative colitis, inflammatory joint disease, cachexia in certain leukemias, Alzheimer's disease, numerous types of cancers, diabetes mellitus (type I), pulmonary hypertension, stroke, periventricular leucopenia, meningitis, CNS demyelinating diseases, multiple sclerosis, acute disseminated encephalomyelitis (ADEM), idiopathic inflammatory demyelinating disease, transverse myelitis, Devic's disease, progressive multifocal leukoencephaly, Guillain-Barre syndrome, chronic inflammatory demyelinating polyneuropathy, anti-MAG neuropathy, inflammatory bowel disease, sepsis, septic shock, adult respiratory distress syndrome, pancreatitis, trauma- induced shock, asthma, bronchial asthma, allergic rhinitis, cystic fibrosis, stroke, acute bronchitis, chronic bronchitis, acute bronchiolitis, chronic bronchiolitis, gout, spondylarthropathris, ankylosing spondylitis, Reiter's syndrome, psoriatic arthropathy, enterapathric spondylitis, juvenile arthropathy or juvenile ankylosing spondylitis, reactive arthropathy, infectious or post-infectious arthritis, gonoccocal arthritis, tuberculous arthritis, viral arthritis, fungal arthritis, syphilitic arthritis, Lyme disease, arthritis associated with vasculitic syndromes, polyarteritis nodosa, hypersensitivity vasculitis, Luegenec's granulomatosis, polymyalgin rheumatica, joint cell arteritis, calcium crystal deposition arthropathris, pseudo gout, non-articular rheumatism, bursitis, tenosynomitis, epicondylitis (tennis elbow), carpal tunnel syndrome, repetitive use injury, miscellaneous forms of arthritis, neuropathic joint disease, hemarthrosis, Henoch-Schonlein purpura, hypertrophic osteoarthropathy, multicentric reticulohistiocytosis, arthritis associated with certain diseases, surcoilosis, hemochromatosis, sickle cell disease and other hemoglobinopath es, hyperlipoproteineimia, hypogammaglobulinemia, hyperparathyroidism, acromegaly, familial Mediterranean fever, Behat's Disease, systemic lupus erythrematosis, and relapsing polychondritis, inflammatory conditions resulting from harmful stimuli, such as pathogens, damaged cells, or irritants, sarcoidosis, disseminated intravascular coagulation, atherosclerosis, Kawasaki's disease, macrophage activation syndrome (MAS), HIV, graft- versus-host disease, Sjogren's syndrome, vasculitis, autoimmune thyroiditis, dermatitis, atopic dermatitis, myasthenia gravis, inflammatory conditions of the skin, cardiovascular system, nervous system, liver, kidney and pancreas, cirrhosis, eosinophilic esophagitis, cardiovascular disorders, disorders associated with wound healing, respiratory disorders, chronic obstructive pulmonary disease, emphysema, acute inflammatory conditions, atopic inflammatory disorders, bacterial, viral, fungal or protozoan infections, pulmonary diseases, systemic inflammatory response syndrome (SIRS), hemophagocytic lymphohistiocytosis (HLH), juvenile rheumatoid arthritis, osteoarthritis, psoriatic arthritis, lupus nephritis, lupus- associated arthritis, ankylosing spondylitis, and/or autoimmune diseases.
35. A pharmaceutical composition comprising a peptidomimetic of any one of claims 1 through 30 and a pharmaceutically acceptable carrier.
36. A method of modifying an IL-IR modulatory peptide, the method comprising steps of:
(a) providing a peptide that modulates the IL-IR activity; (b) modifying the peptide by introducing one or more lactams and/or Bab residues into the peptide; and
(c) testing the IL-IR modulatory activity of the modified peptide.
37. The method of claim 36, wherein the peptide modulates the IL-IR activity non- competitively.
38. The method of claim 37, wherein the peptide is a Negative Allosteric Modulator (NAM) of the IL-IR activity.
39. The method of claim 37, wherein the peptide is a Positive Allosteric Modulator (PAM) of the IL-IR activity.
40. The method of claim 37, wherein the peptide is both a NAM and a PAM of the IL-IR activity.
41. The method of any one of claims 36-40 further comprising a step of identifying a modified peptide having improved ability to modulate the IL-IR activity as compared to a control.
42. The method of claim 41, wherein the control is the corresponding unmodified parent peptide.
43. A modified IL-IR modulator peptide according to the method of any one of claims 36 through 42.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CA2793683A CA2793683A1 (en) | 2009-03-20 | 2010-03-19 | Peptidomimetics for modulating interleukin-1 receptor |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US16207009P | 2009-03-20 | 2009-03-20 | |
US61/162,070 | 2009-03-20 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2010106441A2 true WO2010106441A2 (en) | 2010-09-23 |
WO2010106441A3 WO2010106441A3 (en) | 2010-11-18 |
Family
ID=42740062
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/IB2010/000914 WO2010106441A2 (en) | 2009-03-20 | 2010-03-19 | Peptidomimetics for modulating interleukin-1 receptor |
Country Status (2)
Country | Link |
---|---|
CA (1) | CA2793683A1 (en) |
WO (1) | WO2010106441A2 (en) |
Cited By (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2023244554A1 (en) * | 2022-06-15 | 2023-12-21 | Merck Sharp & Dohme Llc | Cyclic peptides for trapping interleukin-1 beta |
EP4204444A4 (en) * | 2020-08-28 | 2024-10-09 | Valorisation-HSJ, Limited Partnership | INTERLEUKIN-1 RECEPTOR MODULATORS AND USES THEREOF |
WO2025106386A1 (en) * | 2023-11-14 | 2025-05-22 | Merck Sharp & Dohme Llc | A cyclic peptide for trapping interleukin-1 beta |
WO2025128805A1 (en) * | 2023-12-15 | 2025-06-19 | Merck Sharp & Dohme Llc | A cyclic peptide il-1beta trap for the treatment of atherosclerosis and inflammatory disorders |
Family Cites Families (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6706916B1 (en) * | 1999-02-23 | 2004-03-16 | Toray Fine Chemicals Co., Ltd. | Optically active amino acid derivatives and processes for the preparation of the same |
AU2005217642B2 (en) * | 2004-02-23 | 2012-04-12 | Trustees Of Tufts College | Lactams as conformationally constrained peptidomimetic inhibitors |
ES2395087T3 (en) * | 2004-05-05 | 2013-02-08 | Valorisation-Recherche, Société en Commandite | Interleukin-1 receptor antagonists, compositions and treatment methods |
CA2650656A1 (en) * | 2005-05-05 | 2007-01-11 | Valorisation Hsj, Societe En Commandite | Cytokine receptor modulators and uses thereof |
-
2010
- 2010-03-19 WO PCT/IB2010/000914 patent/WO2010106441A2/en active Application Filing
- 2010-03-19 CA CA2793683A patent/CA2793683A1/en not_active Abandoned
Cited By (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP4204444A4 (en) * | 2020-08-28 | 2024-10-09 | Valorisation-HSJ, Limited Partnership | INTERLEUKIN-1 RECEPTOR MODULATORS AND USES THEREOF |
WO2023244554A1 (en) * | 2022-06-15 | 2023-12-21 | Merck Sharp & Dohme Llc | Cyclic peptides for trapping interleukin-1 beta |
JP7645434B2 (en) | 2022-06-15 | 2025-03-13 | メルク・シャープ・アンド・ドーム・エルエルシー | Cyclic peptides for capturing interleukin-1 beta - Patent Application 20070223333 |
WO2025106386A1 (en) * | 2023-11-14 | 2025-05-22 | Merck Sharp & Dohme Llc | A cyclic peptide for trapping interleukin-1 beta |
WO2025128805A1 (en) * | 2023-12-15 | 2025-06-19 | Merck Sharp & Dohme Llc | A cyclic peptide il-1beta trap for the treatment of atherosclerosis and inflammatory disorders |
Also Published As
Publication number | Publication date |
---|---|
WO2010106441A3 (en) | 2010-11-18 |
CA2793683A1 (en) | 2010-09-23 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
AU2010321240B2 (en) | Template-fixed peptidomimetics with CCR10 antagonistic activty | |
US8618054B2 (en) | Interleukin-1 receptor antagonists, compositions, and methods of treatment | |
CN111447941B (en) | Polypeptide conjugates for intracellular delivery of binding peptides | |
CN115698032A (en) | Efficient peptide condensation of difficult sequences | |
Tang et al. | Synthesis of cyclopentapeptides and cycloheptapeptides by DEPBT and the influence of some factors on cyclization | |
JP2024543204A (en) | Peptide inhibitors of the interleukin-23 receptor | |
WO2010106441A2 (en) | Peptidomimetics for modulating interleukin-1 receptor | |
CA2607113C (en) | Interleukin-1 receptor antagonists, compositions, and methods of treatment | |
US20230303647A1 (en) | Cyclic chemerin-9 derivatives | |
Láng et al. | Off-pathway 3D-structure provides protection against spontaneous Asn/Asp isomerization: shielding proteins Achilles heel | |
US8993515B2 (en) | Peptidomimetics comprising N-amino cyclic urea residues and uses thereof | |
Wong et al. | A comparison of pseudoproline substitution effects on cyclisation yield in the total syntheses of segetalins B and G | |
JPWO2014061772A1 (en) | Novel NK3 receptor agonist | |
EP4063380A1 (en) | Inhibitors of the wnt signaling pathway and uses thereof | |
WO2002102833A1 (en) | Novel endomorphine derivatives | |
Zimmeter | Stabilization of alpha helical peptides by guanidine stapling | |
Frączak et al. | The Biological Consequences of Replacing d‐Ala in Biphalin with Amphiphilic α‐Alkylserines | |
TW202515593A (en) | Peptide inhibitors of interleukin-23 receptor | |
EP3906935A1 (en) | Peptides for preventing or treating viral infections | |
HK40080071A (en) | Efficient peptide condensation method for difficult sequences | |
Murray | cHYD1 solution phase synthesis optimization and the development of a novel human growth hormone antagonist and agonist | |
TW202519253A (en) | Peptide inhibitors of interleukin-23 receptor | |
Aillard | Small molecule mimics of trans-proline: synthesis and applications | |
Beauregard | Degree M. Sc.--Université de Montréal, 2012. | |
Varese | Approaches to the synthesis of cyclic peptides with inhibitory activity |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
121 | Ep: the epo has been informed by wipo that ep was designated in this application |
Ref document number: 10753186 Country of ref document: EP Kind code of ref document: A2 |
|
NENP | Non-entry into the national phase |
Ref country code: DE |
|
122 | Ep: pct application non-entry in european phase |
Ref document number: 10753186 Country of ref document: EP Kind code of ref document: A2 |
|
ENP | Entry into the national phase |
Ref document number: 2793683 Country of ref document: CA |