WO2005066156A1 - Selective kinase inhibitors - Google Patents
Selective kinase inhibitors Download PDFInfo
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- WO2005066156A1 WO2005066156A1 PCT/AU2005/000022 AU2005000022W WO2005066156A1 WO 2005066156 A1 WO2005066156 A1 WO 2005066156A1 AU 2005000022 W AU2005000022 W AU 2005000022W WO 2005066156 A1 WO2005066156 A1 WO 2005066156A1
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- Prior art keywords
- alkyl
- hetaryl
- aryl
- alkylhetaryl
- independently
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- C07D405/12—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a chain containing hetero atoms as chain links
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D405/00—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom
- C07D405/14—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing three or more hetero rings
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D407/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen atoms as the only ring hetero atoms, not provided for by group C07D405/00
- C07D407/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen atoms as the only ring hetero atoms, not provided for by group C07D405/00 containing three or more hetero rings
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D409/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
- C07D409/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D413/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D413/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
Definitions
- the present invention relates to the field of inhibitors of protein tyrosine kinases in particular the JAK family of protein tyrosine kinases.
- Protein kinases are a family of enzymes that catalyse the phosphory ⁇ ation of specific residues in proteins. In general protein kinases fall into several groups; those which preferentially phosphoiylate serine and/ or threonine residues, those which preferentially phosphorylate tyrosine residues and those which phosphorylate both tyrosine and Ser/Thr residues. Protein kinases are therefore key elements in signal transduction pathways responsible for transducing extracellular signals, incl uding the action of cytokines on their receptors, to the nuclei, triggering various biological events. The many roles of protein kinases in normal cell physiology include cell c cle control and cell growth, differentiation, apoptosis, cell mobility and mitogenesis.
- Frotein kinases include, for example, but arc not limited to, members of the Protein Tyrosine Kinase family (PTKs), which in turn can be divided into the cy toplasmic PTKs and the receptor PTKs (RTKs).
- PTKs Protein Tyrosine Kinase family
- RTKs receptor PTKs
- the cytoplasmic PTKS include the SRC family, (mduding: BLK; FGR; FYN; HCK; T.CK; LYN; SR YES and YKK); the BRK Family (including: BRK; FRK, SAD; and SKM); the CSK f mily (including: CS and CTK); the BTK family, (including BTK; TTK; TEC; KK2 and TXK), the Janus kinase family, (including: JAKT, JAK2, JAK3 and Tyk2), the FA family (including, FAK and PYK2); the Fes family (including FES and FER), the ZAP70 family (including ZAP70 and SYK); the ACK family (including ACK1 and AC 2); and the Abl family (including ABL and ARG).
- SRC family miding: BLK; FGR; FYN; HCK; T.CK; LYN; SR YES and YKK
- the BRK Family including
- the RTK f-unily includes the EGF-Receptor family (including, EG R, HER2 / HER3 and HER4); the Insulin Receptor family (including INS-R and IGF1-R ); the PDGF-Receptor family (including PDGFRoe, FDGFR ⁇ , CSF'IR, KIT, FLK2 ); the VEGF-Receptor family (including; FLT1, FLK1 and FLT4); the FGF-Reccptor family (including FGFR1, FCFR2, FGFR3 and FGFR4 ); the CCK4 family (including CCK4); the MET family (including MET and RON); the TRK family (including TRKA, TRKB, and TRKC ); the AXL family (including AXL, MER, and SKY); the TTE/TEK family (including TIE and TTE2/TEK); the EFH family (including EFHAl, EPHA2, ET ⁇ A3, EFH ⁇ 4, EPHA5, EPHA6,
- the serinc /three-nine specific kinases comprise a number of distinct sub- families, including; the extracellular signal regulated kinases, (p42/ERK2 and p44/ERKI); c-Jun NH2-termtnal kinase (JNK); cAMP-responsive element-binding protein kinases (CREBK); c AMP-dependent kinase (CAPK); mitogen-activated protein kinase-activated protein kinase (MAPK and its relatives); stress-activated protein kinase p38/SAPK2; mitogen-and stress-activated kinase (MSK); protein kinases, PKA, PKB and PKC inter alia.
- JNK extracellular signal regulated kinases
- JNK cAMP-responsive element-binding protein kinases
- CAPK cAMP-dependent kinase
- MEK mitogen-activated protein kinase-activated protein
- the genomes of a number of pathogenic organisms possess genes encoding protein kinases.
- the malarial parasite Plasmodium falciparum and viruses such as HPV and Hepatitis viruses appear to bear kinase related genes.
- Diseases where aberrant kinase activity has been implicated include: diabetes; restenosis; atherosclerosis; f ⁇ brosis of the liver and kidney; ocular diseases; myelo- and lymphoproliferative disorders; cancer such as prostate cancer, colon cancer, breast cancer, head and neck cancer, leukemia and lymphoma; and, auto-immune diseases such as Atopic Dermatitis, Asthma, rheumatoid arthritis, Crohn's disease, psoriasis, Crouzon syndrome, achondroplasia, and thanatophoric dysplasia.
- JAK protein tyrosine kinases
- JH2 domain The next domain N-te ⁇ ninal to Jill is the kinase-related domain, designated here as the JH2 domain. Each domain is then enumerated up to the JH7 located at the N-terminus, The high degree of conservation of these J ⁇ K homology (JH) domains suggests that they are each likely to play an important role in the cellular processes in which these proteins operate.
- JAK homology domains are arbitrary, and may or may not define functional domains. Nonetheless, their delineation is a useful device to aid the consideration of the overall structural similarity of this class of proteins.
- Hie feature most characteristic of the JAK family of PTKs is the possession of two ldnase- related domains (JH1 and JH2) ( ilks et al, 1991).
- the putative PTK domain of JAKl (JH1) contains highly conserved motifs typical of PTK domains, including the presence of a tyrosine residue at position 1022 located 11 residues C-terminal to sub-domain VII that is considered diagnostic of membership of the tyrosine-specific class of protein kinases
- Alignment of the human JAKl PTK domain (255 amino acids), with other members of the PTK class of proteins revealed homology with other functional PTKs (for example, 28% identity with c-fes (Wilks and Kurban, 1988) and 37% homology to TRK (Kozma et al, 1988)).
- the JH1 domains of each of the JAK family members possess an interesting idiosyncrasy witt i the highly conserved sub-domain VTIT motif (residues 1015 to 1027 in JAK2) that is believed to lie close to the active site, and define substrate specificity.
- the phenylalanine and tyrosine residues flanking the conserved tiyptophan in this motif are . unique to the JAK family of PTKs.
- the JH1 domains of each of the members of the JAK family are typical PTK domains.
- JAK family members will provide a means of inhibiting the action of those cytokines that drive immune pathologies, such as asthma and as immunosuppressivc agents for, amongst others, organ transplants, lupus, multiple, sclerosis, rheumatoid arthritis, psoriasis, Type I diabetes and complications from diabetes, cancer, atopic dermatitis, autoimmune thyroid disorders, ulcerative colitis, Crohn's disease, Alzheimer's disease, and leukcmia/lymphoma.
- immune pathologies such as asthma and as immunosuppressivc agents for, amongst others, organ transplants, lupus, multiple, sclerosis, rheumatoid arthritis, psoriasis, Type I diabetes and complications from diabetes, cancer, atopic dermatitis, autoimmune thyroid disorders, ulcerative colitis, Crohn's disease, Alzheimer's disease, and leukcmia/lymphoma.
- JAKs In addition to the diseases listed in Tables 1 and 2, inhibitors of JAKs could be used as immunosuppresive agents for organ transplants and autoimmune diseases such as lupus, multiple sclerosis, rheumatoid arthritis, Type I diabetes, autoimmune thyroid disorders, Alzheimer's disease and other autoimmune diseases. Additionally, treatment of cancers such as prostate cancer by JAK inhibitors is indicated.
- JAK3 expression appears to be limited to hematopoetic cells. This is consistent with its essential role in signaling through the receptors for IL-2, 1L4, IL-7, IL-9 and IL-1 by non- covalent association of JAK3 with the gamma chain common to these multichain receptors.
- Males with X-linked severe combined immunodeficiency (XSC1D) have defects in the common cytokine receptor gamma chain (gamma c) gene that encodes a shared, essential component of the receptors of interleukin-2 (TT.-2), TL-4, TL-7, IL-9, and 1L-15.
- Prolonged immunomodulation through inhibition of JAK3 signalling should have great therapeutic potential as long as JAK3 inhibition was achieved selectively and not accompanied by inhibition of other kinase-dependent signalling processes.
- the high degree of sequence identity held in common by members of the JAK family of kinases raises the possibility that a compound which inhibits Jak3 would also inhibit other members of the family with detrimental long term consequences.
- prolonged inhibition of Jak2 is likely to lead to erythropenia and (hrorribocytopenia, since the receptors for both crythropoietin and thrombopoietin use only JAK2 for jntraceUular transmission of signals.
- a PTK catalyses the transfer of a phosphate group from a molecule of ATP to a tyrosine residue located on a protein substrate.
- the inhibitors known in the art are usually competitive with either the ATP or the protein substrate of the kinase (I-evitzki 2000). Since the concentration of ATP in a cell is normally very high (millimolar , compounds that are competitive with ATP may lack in vivo activity since it is unlikely that said compounds can reach the concentrations within the cell that are necessary to displace the ATP from its binding site.
- the high homology between members of the JAK family of kinases makes the design of compounds with acceptable selectivity highly challenging. It is believed that by exploiting the minor differences in the amino acid sequence between the members of this family may allow for the identification of selective inhibitors. Alignment of the four members of the JAK family of protein tyrosine kinases reveals that within the amino acids that comprise the ATP-binding pocket of these kinases there are very few amino acid differences that could be used to target potential inhibitors towards one family member or another.
- a group of compounds based upon a disub ⁇ tituted heterocyclic scaffold which include an alkylating group such as a Michael acceptor are irreversible and selective inhibitors of the enzyme Janus Kinase 3 and as wiU find appUcations in therapy as i munosuppressive agents for organ transplants, lupus, multiple sclerosis, rheumatoid arthritis, psoriasis, Type I diabetes and complications from diabetes, asthma, atopic dermatitis, autoimmune thyroid disorders, ulcerative colitis, Crohn's disease, and other indications where immunosuppression would be desirable.
- these compounds may find application in therapeutic treatments for proUfcrative diseases and cancers such as Leukemia and Lymphoma where JAK3 is hyperactivated and in diseases such as Alzheimer's disease.
- the present invention provides a compound of the general formula I
- Xi, X 2 , X 3 , X are each carbon where one is substituted with Z a d the rest independently with Y; or one of X,, X ⁇ , X 3 , , is N, and the others are carbon where one carbon is substituted with Z and the rest independently with Y;
- A is a ring selected from:
- D is selected from H, C al l, halogen, am o;
- Q is a bond, halogen, C H alkyl, O, S, SO, SO 2 , CO, CS;
- RI and R2 are independently H, C:-, alkyl, Ci-. alkylCF 3 , aryl, hetaryl, Ci-j alkylaryl, c M alkylhetaryl, .
- Y is H, halogen, CN, CF 3 , nitro, OH, C M alkyl, C H alkylNR5R6, C l alkylhetaryl, OCn alkyl, OC 2 . 4 alkylOC ⁇ alkyl, OC w alkylNR5R6, OQ, 4 alkylhetaryl, OC 1-4 alkykyclohetalkyl, SQ.* alkyl, SC 2 -j alkylOC w alkyl, S - 4 alkylNR5R6, NR5R6, NR5COR6, NR5S0 2 R6; and E5 and R6 are each independently H, C M alkyl, or may be joined to form an optionally substituted 3-6 membered ring optionally containing an atom selected from O, S, NR7 and R7 is selected from H, C M alkyl, aryl, hetaryl, Q- alkylaryl, C__ 4 alkylhetaryl
- Z is selected from. :
- R9 and RIO are independently selected from H, C M alkyl, C M alkylNR12R13, i-i alkylOR12, ⁇ - ⁇ alkylhetaryl or may be joined to form a 5-8 membered ring optionally containing an atom selected from O, S, SO, SO2, NR14; Rll is selected from OH, O _ 4 alkyl, NR12R13; n is 0-4; where R12 and R13 are independently selected from H, Gn alkyl, or may be joined to form an optionaUy substituted 3-8 membered ring optionaUy containing an atom selected from O, S, NR14; and R14 is selected from H, C alkyl.
- the present invention consists in a composition comprising a carrier and at least one compound of the first aspect of the invention.
- the present invention consists in a method of treating a tyrosine kinase- associated disease state, the method comprising administering a therapeutically effective amount oi at least one compound of the first aspect of the invention or a therapeutically effective amount of a composition of the second aspect of the invention.
- the present invention provides the use of the compounds of the first aspect or the compositions of the second aspect in the preparation of medicaments for the treatment of JAK3-associated disease states.
- the present invention provides for a method of suppressing the immune system of a subject, the method comprising administering a therapeut ⁇ ca y effective amount of at least one compound, of the first aspect of the invention or a therapeutically effective amount of a composition of the second aspect of the invention, BRIEF DESCRIPTION OF THE FIGURES
- Figure 1 shows the amino acid sequence ahgnment of selected Jak Kinases
- Figure 2 shows a model of the Jak3 kinase ATP binding pocket displaying the Cysteine residue.
- the present invention provides a compound of the general formula T
- Xi, X_, X3, X are each carbon where one is substituted with Z and the rest independently with Y; or one of Xi, X 2 , X 3 , X 4 is N, and the others arc carbon where one carbon is substituted with Z and the rest independently with Y;
- A is a ring selected from:
- D is selected from H, C M alkyl, halogen, amino
- Q is a bond, halogen, C M alkyl, O, S, SO, SO 2 , CO, CS;
- RI and R2 are independently H, C M alkyl, C M alkylCF 3 , aryl, hetaryl, 0. 4 alkylaryl, C alkylhetaryl, Q w cycloalkyl, C 2-3 alkenyL cyclohetalkyl, C w alkylcycloalkyl, C i alkyl cyclohetalkyl, or RI and R2 are joined to form an optionaUy substituted 3-8 membered ring optionally containing an atom selected from O, S, NR3; and R3 is selected from H, C alkyl, aryl, hetaryl, C M alkyl aryl, CM alkyl hetaryl, C R4 where R4 is selected from H, C alkyl, aryl, hetaryl;
- Y is H, halogen, CN, CF 3 , nitro, OH, C M alkyl, C M alkylNR5R6, C alkylhetaryl, OCM alkyl, OQM alkylOCMalkyl, OCM alkylN 5R6, OCM alkylhetaryl, Od alkylcyclohctalkyl, SCM alkyl, SC 2 - 4 alkylOC M alk l SCM alkylNR5R6, NR5R6, NR5COR6, NR5S0 2 R6; and R5 and R6 are each independently H, C alkyl, or may be joined to form an optionally substituted 3-6 membered ring optionally containing an atom selected from O, S, NR7 and R7 is selected from H, C alkyl, aryl, hetaryl, C alkylaryl, C alkylhetaryl;
- Z is selected from :
- R8 is selected from H, C alkyl
- R9 and RlO are independently selected from H, M alkyl, Ci .4 alkylNR12R13, C aikyiOR12, C M aUcylhetaryl or may be joined to form a 5-8 membered ring optionally containing an atom selected from 0, 5, SO, S0 2 , NR14
- RI 1 is selected from OH, OCM alkyl, NR12R13
- n is 0-4
- R12 and R13 are independently selected from H, C alkyl, or may be joined to form an optionaUy substituted 3-8 membered ring optionally containing an atom selected from O, S, NR14
- R14 is selected from H, C alkyl.
- the compound is selected from compounds of the general formula II.
- Xi, Xz, Xi, X are each carbon where on is substituted with Z and the rest independently with Y; or one of X L , X 2 , X 3 , X 4 is N, and the others are carbon where one carbon is substituted with Z and the rest independently with Y;
- A is a ring selected from:
- D is selected from H, CM alkyl, halogen, amino
- Q is a bond, halogen, C alkyl, O, S, SO, SO 2 , CO, CS
- W is: (i) NR1R2 where RI and R2 are independently H, C alkyl, C 1 4 alkylCF,, aryl, hetaryl, C alkylaryl, C alkylhetaryl, CM cycloalkyl, C 2 .
- fr alkenyl, cyclohetalkyl, CM alkylcycloalkyl, C alkyl cyclohetalkyl, or RI and R2 arc joined to form an optionaUy substituted 3-8 membered ring optionally containing an atom selected from , S, NR3; and R3 is selected from H, CM alkyl, aryl, hetaryl, Q A alkyl aryl, C alkyl hetaryl, COR4 where R4 is selected from H, CM alkyl, aryl, hetaryl; OR (ii) W is H, CM alkyl, aryl, hetaryl, Qwj cycloalkyl, cyclohetalkyl.
- Y is H, halogen, CN, CF 3 , nitro, OH, C alkyl, C w alkylNK5R6, CM alkylhetaryl, OCM alkyl, OCM alkylOCMalkyl, OC M alkylNR5R6, OC alkylhetaryl, OC alkylcyclohetalkyl, SC M alkyl, SC 2 alkylOC M alkyl, SCM alkylNR5R6, NR5R6, NR5COR6, NR5S0 2 R6; and R5 and R6 are each independently H, C M alkyl, or may be joined to form an optionaUy substituted 3-6 membered ring optionaUy containing an atom selected from O, S, NR7 and R7 is selected from H
- RS is selected from H, C alkyl
- R9 and RIO are independently selected from H, CM alkyl, C alkylNR12R13, C alkylOR12, C alkylhetaryl or may be joined to form a 5-8 membered ring optionaUy containing an atom selected from O, S, SO, SOj, NR14
- Rll is selected from OH, OC alkyl, NR12R13
- n is 0-4
- RI 2 and Rl3 are independendy se1 ected from H, C alkyl, or may be joined to form an optionaUy substituted 3-8 membered ring optionally containing an atom selected from O, S, NR14
- R14 is selected from H, C alkyl.
- C alkyl means an unsubstituted or optionaUy substituted straight or branched alkyl chain.
- Aryl means unsubstituted or optionaUy substituted phenyl or naphthyl.
- Hetaryl means an unsubstituted or optionaUy substituted 5- or 6-membered heteroaromatic ring containing one or more heteroatoms selected from O, N, S.
- Cycloalkyl means a 3-8 membered saturated ring
- Cyclohetalkyl means a 3-8 membered saturated ring containing 1-3 heteroatoms selected from O, S, NR15, where R15 is H, C alkyl, aryl, hetaryl.
- Substituents are chosen from halogen, C w alkyl, CF 3 , CN, nitro, aryl, hetaryl, OCF*, OC M lkyl, OC 2 . 5 a1kylNRl6Rl7, Oaryl, Ohetaryl, CQ.R16, CONR16R17, nitro, NR16R17, NR16COR17, NR ' 16S0 2 R17; and R16, R17 are each independently H, C alkyl, C alkyl cycloalkyl, CM alkyl cyclohetalkyl, aryl, hetaryl, Chalky!
- the compounds of formula I may irreversibly inhibit JAK 3.
- the strength of binding of reversible inhibitors of an enzyme is measured by the IC 50 value which is a reflection of the equiUbrium constant of the interaction between the inhibitor and the active site of the enzyme.
- Irreversible inhibitors display an apparent iCm because once the inhibitor is bound it will not leave the active site and the measured ICsu WiU therefore improve (i.e. number will decrease) over time.
- the compound f example 20 exhibits an TC ⁇ " of ⁇ 40nM after 20 minute incubation with enzyme (prior to addition of ATP) whereas the "IC50" drops to 7nM after 90 min pre-incubation.
- the compound of formul I selectively inhibits JAK 3 with respect to JAK 1 or JAK 2.
- selectively inhibits is defined to mean that the apparent IC 5
- the compounds of this invention include all conformational isomers (eg. cis and trans isomers).
- the compounds of the present invention have asymmetric centers and therefore exist in different enantiomeric and diastereomeric forms.
- This invention relates to the use of aU optical Isomers and stereoisomers of the compounds of the present invention, and mixtures thereof, and to aU pharmaceutical compositions and methods of treatment that may employ or contain them.
- the compounds of formula I may also exist as taut ⁇ mers.
- This invention relates to the use of aU such tautomcrs and mixtures thereof.
- This invention also encompasses pharmaceutical compositions containing prodrugs of compounds of the formula I.
- This invention also encompasses methods of treating or preventing disorders that can be treated or prevented by the inhibition of protein kinases, such as JAK comprising administering prodrugs of compounds of the formula I.
- Compounds of formula I having free amino, amido, hydroxy or carboxyUe groups can be converted into prodrugs.
- Prodrugs include compounds wherein an amino acid residue, or a polypeptidc chain of two or moire (eg, two, three or four) amino acid residues which are covalently joined through peptide bonds to free amino, hydroxy and carboxyUc acid groups of compounds of formula I.
- the ⁇ urtino acid residues include the 20 naturally occurring amino acids commonly designated by three letter symbols and also include, 4- hydroxyproline, hydroxylysine, demosine, isodemosine, 3-methylhistidine, norvlin,beta- alan ⁇ ne, gamma-arninobutyric acid, citrulliiie, homocysteine, homoserine, omifhine and methioine sulfone.
- Prodrugs also include compounds wherein carbonates, carbamares, amides and alkyl esters which are covalently bonded to the above substituents of formula 1 through the carbonyl carbon prodrug sidechain.
- Prodrugs also include phosphate derivatives of compounds of formula I (such as acids, salts of acids, or esters) joined through a phosphorus-oxygen bon to a free hydroxyl of compounds of formula L
- the compound can be used as a purified isomer or as a mixture of any ratio of isomers. It is however preferred that the mixture comprises at least 70%, 80%, 90%, 95%, or 99% of the preferred isomer.
- the compound is selected from the compounds set out in the Examples. More preferably, the compound is selected from the compounds set out in Table 3.
- the present invention consists in a composition comprising a carrier and at least one compound of the first aspect of the invention.
- the present invention consists in a method of treating a tyrosine kinase- associated disease state, the method comprising administering a therapeuticaUy effective amount of at least one compound of the first aspect of the invention or a therapeutically effective amount of a composition of the second aspect of the invention.
- the disease state involves JAKl, JAK2, JAK3 or TYK2.
- the disease state is selected from the grou consisting of Atopy, such as AUergic Asthma, Atopic Dermatitis (Eczema), and AUergic Rhinitis; Cell Mediated Hypersensitivity, such as Allergic Contact Dermatitis and Hypersensitivity Pneumonitis; Rheumatic Diseases, such as Systemic Lupus Er hematosus (SLE), Rheumatoid Arthritis, Juvenile Arthritis, Sjogren's Syndrome, Sc ⁇ eroderma, Polymyositis, Ankylosing Spondyliris, Psoriatic Arthritis; Other autoimmune diseases such as Type I diabetes, autoimmune thyroid disorders, and Alzheimer's disease; Viral Diseases, such as Epstein Barr Virus (EBV), Hepatitis B, Hepatitis C, HIV, HTLV 1, VariceUa-Zoster Virus (VZV), Human PapiUoma Virus (HPV
- EBV Epstein Barr Virus
- HBV Epstein
- tyrosine kinasc-associated disease state refers to those disorders which result from aberrant tyrosine kinase activity, in particular JAK activity and/or which are alleviated by inhibition of one or more of these enzymes.
- the present invention provides the use of the compounds described in the preparation of medicaments for the treatment of JAK3-associated disease states.
- the present invention provides for a method of suppressing the immune system of a subject, the method comprising administering a therapeuticaUy effective amount of at least one compound of the first aspect of the invention or a therapeuticaUy effective amount of a composition of the second aspect of the invention.
- the method of suppressing the immune system is for the treatment of disease states selected from lupus, multiple sclerosis, rheumatoid arthritis, psoriasis, Type I diabetes and complications from diabetes, cancer, asthma, atopic dermatitis, autoimmune thyroid disorders, ulcerative colitis, Crohn's disease, and Alzheimer's disease.
- disease states selected from lupus, multiple sclerosis, rheumatoid arthritis, psoriasis, Type I diabetes and complications from diabetes, cancer, asthma, atopic dermatitis, autoimmune thyroid disorders, ulcerative colitis, Crohn's disease, and Alzheimer's disease.
- the method of suppressing the immune system is to modify the immune system response to a transplant into a subject.
- tire transplant is an organ transplant or tissue transplant.
- compositions comprising at least one of the compounds of the formula 1 or II capable of treating a JAK3-associated disorder in an amount effective therefor, and a pharmaceuticaUy acceptable vehicle or dUue t.
- the compositions of the present invention may contain other therapeutic agents as described below, and may be formulated, for example, by employing conventional solid or liquid vehicles or diluents, as weU as pharmaceutical additives of a type appropriate to the mode of desired adrrtinistration (for example, excipients, binders, preservatives, stabilizers, flavors, etc.) according to techniques such as those well known in the art of pharmaceutical formulation.
- the compounds of the formula I or il may be administered by any suitable means, for example, oraUy, such as in the form of tablets, capsules, granules or powders; sublinguaUy; bucc ⁇ ly; parenteraUy, such as by subcutaneous, intravenous, intramuscular, or intracisternal injection or infusion techniques (e.g., as sterile injectable aqueous or non- aqueous solutions or suspensions); nasaUy such as by inlialation spray; topically, such as in the form of a cream or ointment; or rectally such as in the form of suppositories; in dosage unit formulations containing non-toxic, pharmaceutically acceptable vehicles or dUucnts.
- oraUy such as in the form of tablets, capsules, granules or powders; sublinguaUy; bucc ⁇ ly; parenteraUy, such as by subcutaneous, intravenous, intramuscular, or intracister
- the compounds may, for example, be administered in a form suitable for immediate release or extended release. Immediate release or extended release may be achieved by the use of suitable pharmaceutical compositions comprising the present compounds, or, particularly in the case of extended release, by the use of devices such as subcutaneous implants or osmotic pumps.
- mammals including, but not limited to, cows, sheep, goats, horses, dogs, cats, guinea pigs, rats or other bovine, ovine, equine, canine, feline, rodent or murine species can be treated.
- the method can also be practiced in other species, such as avian species (e.g., chickens).
- the disease or condition is one in which the actions of eosinophils and/or lymphocytes are to be inhibited or promoted, in order to modulate the inflarnrnat ⁇ ry respoose.
- the subjects treated in the above methods, in whom which JAK3 inhibition is desired are mammals, mduding, but not limited to, cows, sheep, goats, horses, dogs, cats, guinea pigs, rats or other bovine, ovine, equine, canine, feline, rodent or murine species, and preferably a human being, male or female.
- therapeutically effective amount means the amount of the subject composition that will elicit the biological or medical response of a tissue, system, animal or human that is being sought by the researcher, veterinarian, medical doctor or other clinician.
- composition as used herein is intended to encompass a product comprising the specified ingredients in the specified amounts, as well as any product which results, directly or indirectly, from combination of the specified ingredients in the specified amounts.
- pharmaceutically acceptable it is meant the carrier, diluent or excipient must be compatible with the other ingredients of the formulation and not deleterious to the recipient thereof.
- administration of and or “adirdissering a” compound should be understood to mean providing a compound of the invention to the individual in need of treatment.
- the pharmaceutical compositions for the administration of the compounds of this invention may conveniently be presented in dosage unit form and may be prepared by any of the methods weU known in the art of pharmacy.
- AU methods include the step of bringing the active ingredient into association with the carrier which constitutes one or more accessory ingredients.
- the pharmaceutical compositions are prepared by uniformly and intimately bringing the active ingredient into association with a Hquid carrier or a finely divided soUd carrier or both, and then, if necessary, shaping the product into the desired formulation.
- the active object compound is included in an amount sufficient to produce the desired effect upon the process or condition of diseases.
- composition is intended to encompass a product comprising the specified ingredients in the specified amounts, as weU as any product which results, directly or in irectly, from combination of the specified ingredients in the specified amounts.
- compositions containing the active ingredient may be in a form suitable for oral use, for example, as tablets, troches, lozenges, aqueous or oily suspensions, dispersible powders or granules, emulsions, hard or soft capsules, or syrups or elixirs.
- Compositions intended for oral use may be prepared according to any method known to the art for the manufacture of pharmaceutical compositions and such compositions may contain one or more agents selected from the group consisting of sweetening agents, flavoring agents, coloring agents and preserving agents in order to provide pharmaceutically elegant and palatable preparations. Tablets contain the active ingredient in admixture with non-toxic pharmaceuticaUy acceptable excipients which are suitable for the manufacture of tablets.
- excipients may be for example, inert dUuents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, for example, corn starch, or alginic acid; binding agents, for example starch, gelatin or acacia, and lubricating agents, for example magnesium stearate, stearic acid or talc.
- the tablets may be uncoated or they may be coated by known techniques to delay disintegration and absorption in the gastrointestinal tract and thereby provide a sustained action over a longer period.
- a time delay material such as glyceryl monostearate or glycetyl distearate may be employed.
- Formulations for oral use may also be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium, for example peanut oil, liquid paraffin, or olive Oil.
- Aqueous suspensions contain the active materials in admixture with excipients suitable for the manufacture of aqueous suspensions.
- excipients are suspending agents, for example sodium carboxymethy ellulose, methylccUulose, hydroxy- propylmethytceUulose, sodium alginate, polyvinyl-pyrroKdone, gu tragacanth and gum acacia; dispersing or wetting agents may be a naturally-occurring phosphatide, for example ledthin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyethylene sorbitan monooleate.
- dispersing or wetting agents may be a naturally
- the aqueous suspensions may also contain one or more preservatives, for example ethyl, or n-propyl, p-hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose or saccharin.
- preservatives for example ethyl, or n-propyl, p-hydroxybenzoate
- coloring agents for example ethyl, or n-propyl, p-hydroxybenzoate
- coloring agents for example ethyl, or n-propyl, p-hydroxybenzoate
- flavoring agents for example ethyl, or n-propyl, p-hydroxybenzoate
- sweetening agents such as sucrose or saccharin.
- OUy suspensions may be formulated by suspending the active ingredient in a vegetable oU, for example arachis oil, olive oil, sesame oil or coconut oU, or in a mineral oU such as Hquid paraffin.
- the ofly suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol.
- Sweetening agents such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation.
- These compositions may be preserved by the addition of an anti-oxidant such as ascorbic acid.
- Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives.
- a dispersing or wetting agent e.g., glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, g., g., g., g., g., g., g., sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol,
- compositions of the invention may also be in the form of oil-in- ater emulsions.
- the ofly phase may be a vegetable oU, for example otivc oil or arachis oU, or a mineral oU, for example liquid paraffin or mixtures of these.
- Suitable emulsifying agents may be naruraUy- occurring gums, for example gum acacia or gum tragacanth, naturaUy- occurring phosphatides, for example soybean, ledthin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate, and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate.
- the emulsions may also contain sweetening and flavoring agents.
- Syrups and elixirs may be formulated with sweetening agents, for example glycerol, propylene glycol, sorbitol or sucrose.
- Such formulations may also contain a demulcent, a preservative and flavoring and coloring agents.
- the pharmaceutical compositions may be in the form of a sterile injectable aqueous or oleagenous suspension. This suspension may be formulated according to the known art using those suitable dispersing or wetting agents and suspending agents which have been mentioned above.
- the sterile injectable preparation may also be a sterile injectable solution or suspension in a non-toxic parenteraUy-acceptable diluent or solvent, for example as a solution in 1,3-butane diol.
- a non-toxic parenteraUy-acceptable diluent or solvent for example as a solution in 1,3-butane diol.
- acceptable vehicles and solvents that may be employed are water, Ringer's solution and isotonic sodium chloride solution.
- sterile, fixed oils are conventionally employed as a solvent or suspending medium.
- any bland fixed oil may be employed including synthetic mono- or diglycerides.
- fatty acids such as oleic add find use in the preparation of injectablcs.
- the compounds of the present invention may also be administered in the f rm of suppositories for rectal adrninistration of the drug.
- These compositions can be prepared by mixing the drug with a suitable ncm-irritating excipient which is sotid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug.
- a suitable ncm-irritating excipient which is sotid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug.
- Such materials are cocoa butter and polyethylene glycols.
- topical use creams, ointments, jellies, solutions or suspensions, etc., containing the compounds of the present invention are employed.
- topical appUcation shaU include mouthwashes and gargles.
- the compounds of the present invention can also be actirunistercd in the form of liposomes.
- liposomes are generally derived from phosphoUpids or other lipid substances. Liposomes are formed by mono- or multUameUar hydrated liquid crystals that are dispersed in an aqueous medium. Any non-toxic, physiologicaUy acceptable and etabolisable lipid capable of forming Hposomes can be used.
- the present compositions in uposome form can contain, in addition to a compound of the present invention, stabilisers, preservatives, excipients and the like.
- the preferred lipids are the phosphoUpids and phosphatidyl cholines, both natural and synthetic. Methods to form liposomes are known in the art.
- the pharmaceutical composition and method of the present invention may further comprise other therapeuticaUy active compounds as noted herein which are usuaUy applied in the treatment of the above mentioned pathological conditions. Selection of the appropriate agents for use in combination therapy may be made by one of ordinary skill in the art, according to conventional pharmaceutical principles.
- the combination of therapeutic agents may act ynergistically to effect the treatment or prevention of the various disorders described above. Using this approach, one may be able to achieve therapeutic efficacy with lower dosages of each agent, thus reducing the potential for adverse side effects.
- cyclosporins e.g., cyclosporin A
- CTLA4-Ig antibodies such as ICAM-3, anti-lL-2 receptor (Anti-Tac), anti-CD45RB, anti-CD2, anti-CD3 (OKT-3), anti-CD4, anti-CD80, anti-CD86
- agents blocking the interaction between CD40 and gp39 such as antibodies spedfic for CD40 and/or gp39 (i.e., CD154), fusion proteins constructed from CD40 and gp39 (CD4fJlg and CD8gp39), inhibitors, such aa nuclear translocation inhibitors, of NF-kappa B function, such as deoxysperguaUn (DSG), cholesterol biosynthesis inhibitors such as HMG CoA reductase inhibitors (lovastatin and simvastatin), non-steroidal antiinflammatory drugs (NSAIDs) such as ibuprofcn, aspirin, acetaminophen, leflunom
- NSAIDs non-
- an appropriate dosage level will generally be about 0.01 to 500 mg per kg patient body weight per day which can be administered in single or multiple doses.
- the dosage level wiU be about 0.1 to about 250 g/kg per day; more preferably about 0.5 to about 100 mg/kg per day.
- a suitable dosage level may be about 0.01 to 250 mg/kg per day, about 0.05 to 100 mg/kg per day, or about 0.1 to 50 mg/kg per day.
- the dosage may be 0.05 to 0.5, 0..5 to 5 or 5 to 50 mg/kg per day.
- the compositions are preferably provided in the form of tablets containing 1.0 to 1000 UUgrams of the active ingredient, particularly 1.0, 5.0, 10.0, 15.0. 20.0, 25.0, 50.0, 5-0, 100.0, 150.0, 200.0, 250.0, 300.0, 400.0, 500.0, 600.0, 750,0, 800-0, 00.0, and 1000.0 miUigrams of the active ingredient for the symptomatic adjustment of the dosage to the patient to be treated.
- the compounds ma be administered on a regimen of 1 to 4 times per day, preferably once or twice per day.
- the specific dose level and frequency of dosage for any particular patient may be varied and wiU depend upon a variety of factors including the activity of the specific compound employed, the metabohc stabiUty and length of action of that compound, the age, body weight, general health, sex, diet, mode and time of administration, rate of excretion, drug combination, the severity of the particular condition, and the host undergoing therapy.
- the synthesis may begin with a nucleophiUc aromatic substitution to generate a monoarr no-monohalo intermediate.
- the nucleophiUc aromatic substitution is typicaUy carried out by addition of an arr he to the di-halogenated heter ⁇ cycle in a solvent such as ethanol, isopropanol, tert-butanol, dioxane, THF, DMF, toluene or xylenc.
- the reaction is typicaUy performed at elevated temperature in the presence of excess amine or a non-nudeophilic base such as triethylamine or diisopropylethylamine, or an inorganic base such as potassium carbonate or sodium carbonate.
- a non-nudeophilic base such as triethylamine or diisopropylethylamine
- an inorganic base such as potassium carbonate or sodium carbonate.
- the amino substituent may be introduced through a transition metal catalysed amination reaction.
- Typical catalysts for such transformations include Pd(OAc) 2 /P(t-Bu) 3 , Fd 2 (dba) 3 /B1NAP and Pd(OAc) 2 /BlNAP.
- the synthesis typicaUy begins with a cross-coupling reaction between dihaloheterocycle and a suitably l ⁇ ctionalised coupling partner.
- Typical coupling partners are boronic adds or esters (Suzuki coupling; see for example Miyaura and Suzuki 1995), sra ⁇ nanes (StiUe coupling: sec for example StiUe 1986), Grignard reagents (Kumada coupling: Kumada, Tamao and Sumitani 1988) or orga ⁇ ozinc species (Negishi coupling: Negishi 2002).
- the Suzuki coupling is the preferred coupling method and is typicaUy performed in a solvent such as DME, THF, DMF, ethanol, propanol, toluene, or 1,4-dioxane in the presence of a base such as potassium carbonate, lithium hydroxide, caesium carbonate, sodium hydroxide, potassium fluoride or potassium phosphate.
- a base such as potassium carbonate, lithium hydroxide, caesium carbonate, sodium hydroxide, potassium fluoride or potassium phosphate.
- the reaction may be carried out at elevated temperatures and the palladium catalyst employed may be selected from Pd(PPh 3 ) 4 , Pd(OAc) 2 , [PdCl 2 (dppf)l, Pd 2 (dba) 3 /P(t-Bu) 3 .
- Amide derivatives of the acid may be readily formed by coupling an amine with the acid using coupling reagents such as dicyclc ⁇ exylcarbocuxmide, l-(3- dimelhylam opro ⁇ yl)-3-ethylcarbodiimide, diisopropylcarb ⁇ >diimidc or carbonyldiimidazole in solvents such as dichloromethane, tetrahydrofuran or 1,4-dioxane.
- coupling reagents such as dicyclc ⁇ exylcarbocuxmide, l-(3- dimelhylam opro ⁇ yl)-3-ethylcarbodiimide, diisopropylcarb ⁇ >diimidc or carbonyldiimidazole in solvents such as dichloromethane, tetrahydrofuran or 1,4-dioxane.
- the acid can be converted to the respective acid chloride using thionyl chloride, oxalyl chloride, A ⁇ tric-hlorometiTylJcarboriate or eya ⁇ uric chloride, or to the mixed anhydride species using, for example, /-butyl chloroformate, using procedures well known to those skilled in the art.
- the acid chloride or mixed anhydride derivatives can then be reacted with the desired amine preferably in the presence of abase such as triethylamine, diisopropylethylamine or solid phase equivalent in a solvent such as dichloromethane, tetrahydrofuran, dioxane or ethyl acetate at ambient or elevated temperatures, to generate the amide.
- abase such as triethylamine, diisopropylethylamine or solid phase equivalent in a solvent such as dichloromethane, tetrahydrofuran, dioxane or ethyl acetate at ambient or elevated temperatures
- the acid chloride may also react with the required at ine under aqueous conditions preferably in the presence of an inorganic base such as sodium hydroxide, potassium hydroxide or sodium carbonate to generate the desired amide.
- Thioamides may be prepared from the amides formed above by methods weU-known to those skUled in the art and include reaction of the amide with Lawesson's reagent in a solvent such as toluene at elevated temperature.
- the second step of the synthesis involves a nucleophiUc aromatic substitution reaction of the monohalo intermediate -with a benzimidazole or azabenzimidazole.
- the reaction is typically performed using a salt of the benzimidazole or azabenzimidazole in solvents such as T ⁇ F, DMF, DMA, NMP, toluene, or xylene from room temperature to reflux.
- the benzimidazole or azabenzimidazole salt is prepared by reaction with a metal hydride such as sodium or potassium hydride or by reaction With caesium carbonate.
- a metal-catalysed coupling reaction can be used to introduce the benzimidazole or azabenzimidazole ring-
- Typical metal catalysts include Pd(OAc) 2 /dppf, PdCl 2 /dppe, Pd z (OAc) 2 /P(t-Bu) 3 , (CuOTt P H.
- the reaction is typicaUy performed using a base such as caesium carbonate, rubidium carbonate, potassium carbonate, sodium tcrt-butoxide or potassium phosphate in a solvent such as xylene, toluene, or DMF from room temperature to reflux.
- a base such as caesium carbonate, rubidium carbonate, potassium carbonate, sodium tcrt-butoxide or potassium phosphate
- a solvent such as xylene, toluene, or DMF from room temperature to reflux.
- phase transfer agents e.g. cetrimonium bromide
- copper complexing agents e.g. phenanthrolinc
- reaction sequence outlined above may be reversed beginning with coupling of the benzimidazole or azabenzimidazole to the dihaloheterocycle using the methods outlined above, foUowed by introduction of the second substituent onto the heterocyclic nucleus using the procedures outlined above.
- An alternative route to compounds of the general formula I involves a copper mediated reaction between a benzimidazole or azabenzimidazole and an organometaUic reagent (see for example Finer, 2002).
- organometaUic reagents are boronic adds.
- the thiol reactive moiety (depicted as part of the substituents Z) present in compounds of the general formula I of the invention may be already present in the functionaUti.es employed in the synthetic processes described above or ma be introduced at the final stage of the synthetic procedure.
- the thiol reactive moiety may be introduced in compounds bearing a free hydroxyl or amino substituent by coupling with a suitable acid.
- Example 26 The mixture of regioisomers derived from Example 26 (270 mg, 1 mmol) was hydrogenated following the procedure outlined in Example 1 .
- the crude product was chTOmatographed eluting with CH 2 ClrMe H (98:2 ⁇ > 95:5) to separate the 6-isomer (84 mg) * from the less polar fractions and the 5-isomcr from the polar fractions. (122 mg).
- the kinase domain of humanJAK2 was amplified from U937mRNA using the polymerase chain reaction with the following primers:
- JAK3 The kinase domain of humanJAK3 was amplified from U937mRNA using the polymerase chain reaction with the following primers: XHOI-J3 5'-CCG CTC GAG TAT GCC TGC CAA GAC CCC ACG-3' J3-KPNI 5' ⁇ CGG GGT ACC CTA TGA AA A GGA CAC GGA GTG-3' JAK3 PCR products were cloned into the pFastBac HTb expression vector (Gibco) via the Xho I and Kpn 1 sites.
- the JAK3 plasmid was then transformed into competent DHlOBac cells (Gibco), and the recombinant baculovirus produced prepared for transfecti ⁇ n into Sf9 insect cells.
- TY 2 The kinase domain of humanTYK2 was amplified from A549 mRNA using the polymerase chain reaction with the following primers: HT2FK 5'-GGA GCA CTC GAG ATG GTA GCA CAC A ⁇ C CAG GTG-3' IT ⁇ 2.2R 5'-GGA GCA GGA ATT CCC GCG CTG CCG GTC ⁇ A
- a TCT GG-3' TYK2 PCR products were cloned into ⁇ BlueBacHis2A (Invitrogen) via the EcoRT site.
- the recombinant TYK2 baculovirus produced was prepared for transfected into Sf9 insect cells.
- Kinase assays were performed either in a 96 well capture-based ELISA assay or in 384 well Optiplates (Packard) using an Alphascreen Protein Tyrosine Kinase kit. In either casse using approximately 1.5 ⁇ g of affinity purified PTK domain in the presence of 50mM HEPES, pH 7.5, lOrnM MgClj, lSOrnM NaCl and lO ⁇ M-lmM ATP.
- the biotinylated substrate biol n-EGPWLEEEEEAYGWMDF-NHi was used as substrate.
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Abstract
Description
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Priority Applications (14)
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AU2005203919A AU2005203919B2 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
ES05700054T ES2389203T3 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
GB0612225A GB2424882B (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
NZ546058A NZ546058A (en) | 2004-01-12 | 2005-01-12 | Benzimidazole and other fused ring derivatives as selective janus kinase inhibitors |
CA2545427A CA2545427C (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
DK05700054.9T DK1704145T3 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
JP2006548036A JP5283336B2 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitor |
KR1020067011057A KR101164541B1 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
BRPI0506817-7A BRPI0506817A (en) | 2004-01-12 | 2005-01-12 | selective kinase inhibitors |
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EP05700054A EP1704145B1 (en) | 2004-01-12 | 2005-01-12 | Selective kinase inhibitors |
IL175572A IL175572A (en) | 2004-01-12 | 2006-05-11 | Condensed heterocycles, jak selective kinase inhibitors and pharmaceutical compositions comprising them |
US12/895,548 US8329737B2 (en) | 2004-01-12 | 2010-09-30 | Benzimidazoles as selective kinase inhibitors |
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AU2004900103A AU2004900103A0 (en) | 2004-01-12 | Selective Kinase Inhibitors | |
AU2004900103 | 2004-01-12 |
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US12/895,548 Continuation US8329737B2 (en) | 2004-01-12 | 2010-09-30 | Benzimidazoles as selective kinase inhibitors |
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CA2545427A1 (en) | 2005-07-21 |
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US8329737B2 (en) | 2012-12-11 |
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CN1906190A (en) | 2007-01-31 |
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EP1704145A4 (en) | 2009-08-05 |
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