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WO2005028434A2 - Novel heterocyclic compounds as hsp90-inhibitors - Google Patents

Novel heterocyclic compounds as hsp90-inhibitors Download PDF

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Publication number
WO2005028434A2
WO2005028434A2 PCT/US2004/031248 US2004031248W WO2005028434A2 WO 2005028434 A2 WO2005028434 A2 WO 2005028434A2 US 2004031248 W US2004031248 W US 2004031248W WO 2005028434 A2 WO2005028434 A2 WO 2005028434A2
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Prior art keywords
compound
aryl
heteroaryl
group
tautomer
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PCT/US2004/031248
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French (fr)
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WO2005028434A3 (en
Inventor
Srinivas R. Kasibhatla
Marcus F. Boehm
Kevin D. Hong
Marco A. Biamonte
Jiandong Shi
Jean-Yves Le Brazidec
Lin Zhang
David Hurst
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Conforma Therapeutics Corporation
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Priority to JP2006527162A priority Critical patent/JP2007505933A/en
Priority to CN2004800335230A priority patent/CN1882589B/en
Priority to BRPI0414533-0A priority patent/BRPI0414533A/en
Priority to MXPA06002997A priority patent/MXPA06002997A/en
Priority to EP04788954A priority patent/EP1670802A4/en
Priority to AU2004274507A priority patent/AU2004274507B2/en
Priority to CA002539548A priority patent/CA2539548A1/en
Priority to NZ546611A priority patent/NZ546611A/en
Application filed by Conforma Therapeutics Corporation filed Critical Conforma Therapeutics Corporation
Priority to EA200600594A priority patent/EA010160B1/en
Publication of WO2005028434A2 publication Critical patent/WO2005028434A2/en
Priority to IL174375A priority patent/IL174375A0/en
Publication of WO2005028434A3 publication Critical patent/WO2005028434A3/en
Priority to NO20061396A priority patent/NO20061396L/en
Priority to AU2010202750A priority patent/AU2010202750B2/en

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    • C07DHETEROCYCLIC COMPOUNDS
    • C07D487/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
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    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems
    • CCHEMISTRY; METALLURGY
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    • C07DHETEROCYCLIC COMPOUNDS
    • C07D473/00Heterocyclic compounds containing purine ring systems
    • C07D473/02Heterocyclic compounds containing purine ring systems with oxygen, sulphur, or nitrogen atoms directly attached in positions 2 and 6
    • C07D473/18Heterocyclic compounds containing purine ring systems with oxygen, sulphur, or nitrogen atoms directly attached in positions 2 and 6 one oxygen and one nitrogen atom, e.g. guanine
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    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D473/00Heterocyclic compounds containing purine ring systems
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    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D473/00Heterocyclic compounds containing purine ring systems
    • C07D473/26Heterocyclic compounds containing purine ring systems with an oxygen, sulphur, or nitrogen atom directly attached in position 2 or 6, but not in both
    • C07D473/32Nitrogen atom

Definitions

  • the invention relates in general to heterocyclics and related compounds and their broad-spectrum utility, e.g., in inhibiting heat shock protein 90 (HSP90)to thereby treat or prevent HSP90-mediated diseases.
  • HSP90 heat shock protein 90
  • HSP90& are ubiquitous chaperone proteins that are involved in folding, activation and assembly of a wide range of proteins, including key proteins involved in signal transduction, cell cycle control and transcriptional regulation.
  • HSP90 chaperone proteins are associated with important signaling proteins, such as steroid hormone receptors and protein kinases, including, e.g., Raf-1, EGFR, v-Src family kinases, Cdk4, and ErbB-2 ( Buchner J. TIBS 1999, 24, 136-141; Stepanova, L. et al. Genes Dev. 1996, 10, 1491-502; Dai, K. et al. J. Biol Chem. 1996, 271, 22030-4).
  • HSP70 p60 Hop/Stil, Hip, Bagl
  • HSP40 Hdj2/Hsj 1 immunophilins, p23, and p50
  • HSP90 may assist HSP90 in its function (see, e.g., Caplan, A. Trends in Cell Biol. 1999, 9, 262-68).
  • Ansamycin antibiotics e.g., herbimycin A (HA), geldanamycin (GM), and 17- allylaminogeldanamycin (17-AAG) are thought to exert their anticancerous effects, by tight binding of the N-terminus pocket of HSP90, thereby destabilizing substrates that normally interact with HSP90 (Stebbins, C.
  • HSP90 substrate destabilization occurs in tumor and non-transformed cells alike and has been shown to be especially effective on a subset of signaling regulators, e.g., Raf (Schulte, T. W. et al. Biochem. Biophys. Res. Commun. 1997, 239, 655-9; Schulte, T. W., et al. J. Biol. Chem. 1995, 270, 24585-8), nuclear steroid receptors (Segnitz, B.; U. GehringJ. Biol. Chem. 1997, 272, 18694-18701; Smith, D. F. et al. Mol. Cell.
  • Raf Schote, T. W. et al. Biochem. Biophys. Res. Commun. 1997, 239, 655-9
  • nuclear steroid receptors Segnitz, B.; U. Geh
  • HSP90 inhibitors have also been implicated in a wide variety of other utilities, including use as anti-inflammation agents, anti-infectious disease agents, agents for treating autoimmunity, agents for treating stroke, ischemia, multiple sclerosis, cardiac disorders, central nervous system related disorders and agents useful in promoting nerve regeneration (See, e.g., Rosen et al. WO 02/09696 (PCT/US01/23640); Degranco etal. WO 99/51223 (PCT US99/07242); Gold, U.S. Patent 6,210,974 BI; DeFranco et al., US Patent 6,174,875.
  • fibrogenetic disorders including but not limited to scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis, and pulmonary fibrosis also may be treatable with HSP90 inhibitors.
  • Still further HSP90 modulation, modulators and uses thereof are reported in Application Nos.
  • the present invention is directed towards heterocyclic compounds, particularly heterocyclic compounds and related analogs that show broad utility, e.g., by inhibiting HSP90 and treating and preventing diseases that are HSP90-dependent.
  • the invention comprises the heterocyclic compounds and related analogs as specified below in Formulae A, I, IA-E, II, HA-D, III, IIIA-B, and TV an IVA and heterocyclic compounds that are produced by a process of the invention.
  • stereoisomeric forms including the individual enantiomers and diastereomers, racemic mixtures, and diastereomeric mixtures, as well as polymorphs, solvates, esters, tautomers, pharmaceutically acceptable salts and prodrugs of these compounds.
  • Stereoisomers of the compounds of the present invention may be isolated by standard resolution techniques such as, for example, fractional crystallization and chiral column chromatography.
  • the invention provides compounds of Formula A, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, which show utility for inhibiting HSP90 and/or treating and preventing diseases that are HSP90-dependent.
  • FIGURE 1 Various genuses and subgenuses of compounds of Formula A that are within the scope of the invention are illustrated in FIGURE 1. Particularly, the invention provides compounds of Formula 1-IV.
  • the invention provides compounds, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, which show utility for inhibiting HSP90 and/or treating and preventing diseases that are HSP90-dependent, that are prepared by the process comprising: reacting a compound of Formula Y and a compound of Formula Z, wherein: Y is represented by any of the following formulae:
  • Z is L'-R 4 -R 5 .
  • the present invention is directed to pharmaceutical compositions comprising the compounds of the invention, in particular, the compounds of Formulae A, I, II, III and IV and related analogs, and compounds formed by the process of the invention, and their polymorphs, solvates, esters, tautomers, diastereomer, enantiomers, pharmaceutically acceptable salts and prodrugs thereof, and one or more pharmaceutical excipients, for use in treatment or prevention of diseases that are HSP90- dependent.
  • the invention features a method of treating an individual having an HSP90-mediated disorder by administering to the individual a pharmaceutical composition that comprises a pharmaceutically effective amount of a compound of Formulae A, I, II, III or IV, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, enantiomers pharmaceutically acceptable salt or prodrug thereof.
  • the invention provides a method for treating an individual having a disorder selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorders, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant diseases.
  • the invention provides a method for treating an individual having a fibrogenetic disorder, such as, for example, scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
  • a fibrogenetic disorder such as, for example, scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
  • the invention provides a combination therapy comprising the administration of a pharmaceutically effective amount of a compound of Formulae A, I, II, III or IV and related analogs, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt and prodrug thereof, according to any of the preceding aspects or embodiments, and at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents.
  • the anti-neoplastic agent may be selected from the group of alkylating agents, anti- metabolites, epidophyllotoxins antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors. Any of the above described aspects and embodiments of the invention can be combined where practical. The individual compounds, methods and compositions prescribed do not preclude the utilization of other, unspecified steps and agents, and those of ordinary skill in the art will appreciate that additional steps and compounds may also be combined usefully within the spirit of various aspects and embodiments of the invention.
  • Advantages of the invention depend on the specific aspect and embodiment and may include one or more of: ease of synthesis and/or formulation, solubility, and IC 50 relative to previously existing compounds in the same or different classes of HSP90 inhibitors.
  • FIGURE 1 shows various illustrative genuses and subgenuses of Formula A.
  • a "pharmaceutically acceptable derivative or prodrug” means any pharmaceutically acceptable salt, ester, salt of an ester or other derivative of a compound of this invention, which, upon administration to a recipient, is capable of providing, either directly or indirectly, a compound of this invention or a pharmaceutically active metabolite or residue thereof.
  • Particularly favored derivatives or prodrugs are those that increase the bioavailability of the compounds of this invention when such compounds are administered to a patient (e.g., by allowing orally administered compound to be more readily absorbed into blood) or which enhance delivery of the parent compound to a biological compartment (e.g., the brain or lymphatic system).
  • a "pharmaceutically acceptable salt” may be prepared for any compound of the invention having a functionality capable of forming a salt, for example, an acid or base functionality.
  • Pharmaceutically acceptable salts may be derived from organic or inorganic acids and bases.
  • Compounds of the invention that contain one or more basic functional groups, e.g., amino or alkylamino, are capable of forming pharmaceutically acceptable salts with pharmaceutically acceptable organic and inorganic acids.
  • These salts can be prepared in situ during the final isolation and purification of the compounds of the invention, or by separately reacting a purified compound of the invention in its free base form with a suitable organic or inorganic acid, and isolating the salt thus formed.
  • Suitable acid salts include acetate, adipate, alginate, aspartate, benzoate, benzenesulfonate, bisulfate, butyrate, citrate, camphorate, camphorsulfonate, cyclopentanepropionate, digluconate, dodecylsulfate, ethanesulfonate, formate, fumarate, glucoheptanoate, glycerophosphate, glycolate, hemisulfate, heptanoate, hexanoate, hydrochloride, hydrobromide, hydroiodide, 2-hydroxyethanesulfonate, lactate, maleate, malonate, methanesulfonate, 2-napthalenesulfonate, nicotinate, nitrate, oxalate, palmoate, pectinate, persulfate, 3-phenylpropionate, phosphate, picrate, pivalate, prop
  • salts can likewise be prepared in situ during the final isolation and purification of the compounds, or by separately reacting the purified compound in its free acid form with a suitable base, such as the hydroxide, carbonate or bicarbonate of a pharmaceutically acceptable metal cation, with ammonia, or with a pharmaceutically acceptable organic primary, secondary or tertiary amine.
  • a suitable base such as the hydroxide, carbonate or bicarbonate of a pharmaceutically acceptable metal cation, with ammonia, or with a pharmaceutically acceptable organic primary, secondary or tertiary amine.
  • suitable base such as the hydroxide, carbonate or bicarbonate of a pharmaceutically acceptable metal cation, with ammonia, or with a pharmaceutically acceptable organic primary, secondary or tertiary amine.
  • alkali or alkaline earth salts include the lithium, sodium, potassium, calcium, magnesium, and aluminum salts and the like.
  • Illustrative examples of some of the bases that can be used include sodium hydroxide, potassium hydrox
  • Organic amines useful for the formation of base addition salts include ethylamine, diethylamine, ethylenediamine, ethanolamine, diethanolamine, piperazine and the like.
  • This invention also envisions the quatemization of any basic nitrogen-containing groups of the compounds disclosed herein. Water or oil-soluble or dispersible products may be obtained by such quatemization. See, for example, Berge et al., supra.
  • prodrugs of the compounds of this invention include, but are not limited to, esters, carbonates, thiocarbonates, N-acyl derivatives, N- acyloxyalkyl derivatives, quaternary derivatives of tertiary amines, N-Mannich bases, Schiff bases, aminoacid conjugates, phosphate esters, metal salts and sulfonate esters.
  • Suitable positions for derivatization of the compounds of the invention to create "prodrugs” include but are not limited, 2-amino substitution. Those of ordinary skill in the art have the knowledge and means to accomplish this without undue experimentation.
  • Various forms of prodrugs are well known in the art.
  • prodrug derivatives see, e.g., a) Design of Prodrugs, Bundgaard, A. Ed., Elseview, 1985 and Method in Enzymology, Widder, K. et al., Ed.; Academic, 1985, vol. 42, p. 309-396; b) Bundgaard, H. "Design and Application of Prodrugs” in A Textbook of Drug Design and Development, Krosgaard-Larsen and H. Bundgaard, Ed., 1991, Chapter 5, p. 113-191; and c) Bundgaard, H., Advanced Drug Delivery Review, 1992, 8, 1-38. Each of which is incorporated herein by reference.
  • the term "prodrugs” as employed herein includes, but is not limited to, the following groups and combinations of these groups:
  • Hydroxy prodrugs Acyloxyalkyl esters; Alkoxycarbonyloxyalkyl esters; Alkyl esters; Aryl esters; and Disulfide containing esters.
  • alkyl alone or in combination, refers to an optionally substituted straight-chain, or optionally substituted branched-chain saturated hydrocarbon radical having from one to about thirty carbons, more preferably one to twelve carbons.
  • alkyl radicals include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, tert-amyl, pentyl, hexyl, heptyl, octyl and the like.
  • cycloalkyl embraces cyclic alkyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkyl radicals wherein each cyclic moiety has from three to about eight carbon atoms.
  • cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl and the like.
  • a "lower alkyl” is a shorter alkyl, e.g., one containing from one to about six carbon atoms.
  • alkenyl alone or in combination, refers to an optionally substituted straight-chain, or optionally substituted branched-chain hydrocarbon radical having one or more carbon-carbon double-bonds and having from two to about thirty carbon atoms, more preferably two to about eighteen carbons.
  • alkenyl radicals include ethenyl, propenyl, butenyl, 1,3-butadienyl and the like.
  • cylcoalkenyl refers to cyclic alkenyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkenyl radicals wherein each cyclic moiety has from three to about eight carbon atoms.
  • a "lower alkenyl” refers to an alkenyl having from two to about six carbons.
  • alkynyl refers to an optionally substituted straight-chain or optionally substituted branched-chain hydrocarbon radical having one or more carbon-carbon triple-bonds and having from two to about thirty carbon atoms, more preferably from two to about tweove carbon atoms, from two to about six carbon atoms as well as those having from two to about four carbon atoms.
  • alkynyl radicals include ethynyl, 2-propynyl, 2-butynyl, 1,3-butadiynyl and the like.
  • cycloalkynyl refers to cyclic alkynyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkynyl radicals wherein each cyclic moiety has from three to about eight carbon atoms.
  • a “lower alkynyl” refers to an alkynyl having from two to about six carbons.
  • heteroalkyl, heteroalkenyl and heteroalkynyl include optionally substituted alkyl, alkenyl and alkynyl structures, as described above, and which have one or more skeletal chain atoms selected from an atom other than carbon, e.g., oxygen, nitrogen, sulfur, phosphorous or combinations thereof.
  • carbon chain embraces any alkyl, alkenyl, alkynyl, or heteroalkyl, heteroalkenyl, or heteroalkynyl group, which are linear, cyclic, or any combination thereof. If the chain is part of a linker and that linker comprises one or more rings as part of the core backbone, for purposes of calculating chain length, the “chain” only includes those carbon atoms that compose the bottom or top of a given ring and not both, and where the top and bottom of the ring(s) are not equivalent in length, the shorter distance shall be used in determining the chain length. If the chain contains heteroatoms as part of the backbone, those atoms are not calculated as part of the carbon chain length.
  • membered ring can embrace any cyclic structure, including aromatic, heteroaromatic, alicyclic, heterocyclic and polycyclic fused ring systems as described below.
  • membered is meant to denote the number of skeletal atoms that constitute the ring.
  • pyridine, pyran, and pyrimidine are six- membered rings and pyrrole, tetrahydrofuran, and thiophene are five-membered rings.
  • aryl alone or in combination, refers to an optionally substituted aromatic hydrocarbon radical of six to about twenty ring atoms, and includes mono- aromatic rings and fused aromatic ring.
  • a fused aromatic ring radical contains from two to four fused rings where the ring of attachment is an aromatic ring, and the other individual rings within the fused ring may be aromatic, heteroaromatic, alicyclic or heterocyclic.
  • aryl includes mono-aromatic ring and fused aromatic rings containing from six to about twelve carbon atoms, as well as those containing from six to about ten carbon atoms. Examples of aryl groups include, without limitation, phenyl, naphthyl, anthryl, chrysenyl, and benzopyrenyl ring systems.
  • lower aryl refers to an aryl having six to about ten skeletal ring carbons, e.g., phenyl and naphthyl ring systems.
  • heteroaryl refers to optionally substituted aromatic radicals containing from about five to about twenty skeletal ring atoms and where one or more of the ring atoms is a heteroatom such as, for example, oxygen, nitrogen, sulfur, selenium and phosphorus.
  • heteroaryl includes optionally substituted mono-heteroaryl radicals and fused heteroaryl radicals having at least one heteroatom (e.g., quinoline, benzothiazole).
  • a fused heteroaryl radical may contain from two to four fused rings and where the ring of attachment is a heteroaromatic ring, the other individual rings within the fused ring system may be aromatic, heteroaromatic, alicyclic or heterocyclic.
  • heteroaryl also includes mono-heteroaryls or fused heteroaryls having from five to about twelve skeletal ring atoms, as well as those having from five to about ten skeletal ring atoms.
  • heteroaryls include, without limitation, furanyl, benzofuranyl, chromenyl, pyridyl, pyrrolyl, indolyl, quinolinyl, pyridyl-N-oxide, pyrimidyl, pyrazinyl, imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, benzothiozole, benzimidazole, benzoxazoles, benzothiadiazole, benzoxadiazole, benzotriazole, quinolines, isoquinolines, indoles, purinyl, indolizinyl, thienyl and the like and their oxides.
  • lower heteroaryl refers to a heteroaryl having five to about ten skeletal ring atoms, e.g., pyridyl, thienyl, pyrimidyl, pyrazinyl, pyrrolyl, or furanyl.
  • alicyclic alone or in combination, refers to an optionally substituted saturated or unsaturated nonaromatic hydrocarbon ring system containing from three to about twenty ring atoms.
  • the term alicyclic includes mono-alicyclic and fused alicyclic radicals.
  • a fused alicyclic may contain from two to four fused rings where the ring of attachment is an alicyclic ring, and the other individual rings within the fused-alicyclic radical may be aromatic, heteroaromatic, alicyclic and heterocyclic.
  • the term alicyclic also includes mono-alicyclic and fused alicyclic radicals containing from three to about twelve carbon atoms, as well as those containing from three to about ten carbon atoms.
  • alicyclics include, without limitation, cyclopropyl, cyclopropenyl, cyclobutyl, cyclopentyl, cyclodecyl, cyclododecyl, cyclopentadienyl, indanyl, and cyclooctatetraenyl ring systems.
  • the term "lower alicyclic” refers to an alicyclic having three to about ten skeletal ring carbons, e.g., cyclopropyl, cyclopropenyl, cyclobutyl, cyclopentyl, decalinyl, and cyclohexyl.
  • heterocyclic refers to optionally substituted saturated or unsaturated nonaromatic ring radicals containing from five to about twenty ring atoms where one or more of the ring atoms are heteroatoms such as, for example, oxygen, nitrogen, sulfur, and phosphorus.
  • alicyclic includes mono-heterocyclic and fused heterocyclic ring radicals.
  • a fused heterocyclic radical may contain from two to four fused rings where the attaching ring is a heterocyclic, and the other individual rings within the fused heterocyclic radical may be aromatic, heteroaromatic, alicyclic or heterocyclic.
  • heterocyclic also includes mono-heterocrclic and fused alicyclic radicals having from five to about twelve skeletal ring atoms, as well as those having from five to about ten skeletal ring atoms.
  • Example of heterocyclics include without limitation, tetrahydrofuranyl, benzodiazepinyl, tetrahydroindazoleyl, dihyroquinolinyl, and the like.
  • lower heterocyclic refers to a heterocyclic ring system having five to about ten skeletal ring atoms, e.g., dihydropyranyl, pyrrolidinyl, indolyl, piperidinyl, piperazinyl, and the like.
  • alkylaryl or “araalkyl,” alone or in combination, refers to an aryl radical as defined above in which one H atom is replaced by an alkyl radical as defined above, such as, for example, tolyl, xylyl and the like.
  • arylalkyl alone or in combination, refers to an alkyl radical as defined above in which one H atom is replaced by an aryl radical as defined above, such as, for example, benzyl, 2-phenylethyl and the like.
  • heteroarylalkyl refers to an alkyl radical as defined above in which one H atom is replaced by a heteroaryl radical as defined above, each of which may be optionally substituted.
  • alkoxy refers to an alkyl ether radical, alkyl- O-, wherein the term alkyl is defined as above.
  • alkoxy radicals include methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, iso-butoxy, sec-butoxy, tert-butoxy and the like.
  • aryloxy alone or in combination, refers to an aryl ether radical wherein the term aryl is defined as above. Examples of aryloxy radicals include phenoxy, benzyloxy and the like.
  • alkylthio refers to an alkyl thio radical, alkyl-S-, wherein the term alkyl is as defined above.
  • arylthio alone or in combination, refers to an aryl thio radical, aryl-S- , wherein the term aryl is as defined above.
  • heteroarylthio refers to the group heteroaryl-S-, wherein the term heteroaryl is as defined above.
  • acyl refers to a radical -C(0)R where R includes alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocylic, arylalkyl or heteroarylalkyl wherein the alkyl, alkenyl, alkynyl, aryl, heteroryl, alicylic, heterocylic, arylalkyl or heteroaryl alkyl groups may be optionally substituted.
  • acyloxy refers to the ester group -OC(0)R, where R is H, alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl, or heteroarylalkyl wherein the alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl or heteroarylalkyl may be optionally substituted.
  • carbboxy esters refers to -C(0)OR where R is alkyl, aryl or arylalkyl, wherein the alkyl, aryl and arylalkyl groups may be optionally substituted.
  • carbboxamido refers to
  • alkyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl and heteroarylalkyl wherein the alkyl, aryl, heteroaryl, alicyclic, heterocyclic, or arylalkyl groups may be optionally substituted.
  • halogen includes F, CI, Br and I.
  • haloalkyl, haloalkenyl, haloalkynyl and haloalkoxy include alkyl, alkenyl, alkynyl and alkoxy structures, as described above, that are substituted with one or more fluorines, chlorines, bromines or iodines, or with combinations thereof.
  • perhaloalkyl, perhaloalkyloxy and perhaloacyl refer to alkyl, alkyloxy and acyl radicals as described above, that all the H atoms are substituted with fluorines, chlorines, bromines or iodines, or combinations thereof.
  • cycloalkyl, arylalkyl, aryl, heteroaryl, alicyclic, heterocyclic, alkyl, alkynyl, alkenyl, haloalkyl, and heteroalkyl include optionally substituted cycloalkyl, arylalkyl, aryl, heteroaryl, alicyclic, heterocyclic, alkyl, alkynyl, alkenyl, haloalkyl and heteroalkyl groups.
  • alkylamino refers to the group -NHR where R is independently selected from alkyl.
  • dialkylamino refers to the group -NRR' where R and R' are alkyls.
  • sulfuride refers to a sulfur atom covalently linked to two atoms; the formal oxidation state of said sulfur is (II).
  • thioether may be used interchangebly with the term “sulfide.”
  • sulfoxide refers to a sulfur atom covalently linked to three atoms, at least one of which is an oxygen atom; the formal oxidation state of said sulfur atom is
  • sulfurone refers to a sulfur atom covalently linked to four atoms, at least two of which are oxygen atoms; the formal oxidation state of said sulfur atom is (VI).
  • the terms “optional” or “optionally” mean that the subsequently described event or circumstance may but need not occur, and that the description includes instances where the event or circumstance occurs and instances in which it does not.
  • aryl optionally mono- or di-substituted with an alkyl means that the alkyl may but need not be present, or either one alkyl or two may be present, and the description includes situations where the aryl is substituted with one or two alkyls and situations where the aryl is not substituted with an alkyl.
  • Optionally substituted groups may be substituted or unsubstituted.
  • the substituents of an "optionally substituted” group may include, without limitation, one or more substituents independently selected from the following groups or designated subsets thereof: lower alkyl, lower alkenyl, lower alkynyl, lower aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl, heteroarylalkyl, lower alkoxy, lower aryloxy, amino, alkylamino, dialkylamino, diarylalkylammo, alkylthio, arylthio, heteroarylthio, oxo, oxa, carbonyl (-C(O)), carboxyesters (-C(O)OR), carboxamido (-C(0)NH 2 ), carboxy, acyloxy, -H, halo, -CN, -N0 2 , -N 3 , -SH, -OH, -C(0)CH 3 ,
  • An optionally substituted group may be unsubstituted (e.g., -CH 2 CH 3 ), fully substituted (e.g., -CF 2 CF 3 ), monosubstituted (e.g., -CH 2 CH 2 F) or substituted at a level anywhere in- between fully substituted and monosubstututed (e.g., -CH 2 CF 3 ).
  • pyridine- 1-oxy also means "pyridine-N-oxy.”
  • a "pharmacological composition” refers to a mixture of one or more of the compounds described herein, or pharmaceutically acceptable salts thereof, with other chemical components, such as pharmaceutically acceptable carriers and/or excipients. The purpose of a pharmacological composition is to facilitate administration of a compound to an organism.
  • pharmaceutically acceptable carrier means a pharmaceutically-acceptable material, composition or vehicle, such as a liquid or solid filler, diluent, excipient, solvent or encapsulating material, involved in carrying or transporting the subject agent from one organ, or portion of the body, to another organ, or portion of the body.
  • a pharmaceutically-acceptable material such as a liquid or solid filler, diluent, excipient, solvent or encapsulating material, involved in carrying or transporting the subject agent from one organ, or portion of the body, to another organ, or portion of the body.
  • Each carrier must be “acceptable” in the sense of being compatible with the other ingredients of the formulation and not injurious to the patient.
  • materials which can serve as pharmaceutically-acceptable carriers include: (1) sugars, such as lactose, glucose and sucrose; (2) starches, such as com starch and potato starch; (3) cellulose, and its derivatives, such as sodium carboxymethyl cellulose, ethyl cellulose and cellulose acetate; (4) powdered tragacanth; (5) malt;
  • gelatin e.g., ethylene glycol
  • excipients such as cocoa butter and suppository waxes
  • oils such as peanut oil, cottonseed oil, safflower oil, sesame oil, olive oil, com oil and soybean oil
  • glycols such as propylene glycol
  • polyols such as glycerin, sorbitol, mannitol and polyethylene glycol
  • esters such as ethyl oleate and ethyl laurate
  • (13) agar (14) buffering agents, such as magnesium hydroxide and aluminum hydroxide
  • a physiologically acceptable carrier should not cause significant irritation to an organism and does not abrogate the biological activity and properties of the administered compound.
  • An “excipient” refers to an inert substance added to a pharmacological composition to further facilitate administration of a compound. Examples of excipients include but are not limited to calcium carbonate, calcium phosphate, various sugars and types of starch, cellulose derivatives, gelatin, vegetable oils and polyethylene glycols.
  • a "pharmaceutically effective amount” means an amount which is capable of providing a therapeutic and/or prophylactic effect.
  • a typical daily dose (administered in single or divided doses) will contain a dosage level of from about 0.01 mg/kg to about 50- 100 mg/kg of body weight of an active compound of the invention.
  • Preferred daily doses generally will be from about 0.05 mg/kg to about 20 mg/kg and ideally from about 0.1 mg/kg to about 10 mg/kg.
  • Factors such as clearance rate, half-life and maximum tolerated dose (MTD) have yet to be determined but one of ordinary skill in the art can determine these using standard procedures.
  • the preferred therapeutic effect is the inhibition, to some extent, of the growth of cells characteristic of a proliferative disorder, e.g., breast cancer.
  • a therapeutic effect will also normally, but need not, relieve to some extent one or more of the symptoms other than cell growth or size of cell mass.
  • a therapeutic effect may include, for example, one or more of 1) a reduction in the number of cells; 2) a reduction in cell size; 3) inhibition (i.e., slowing to some extent, preferably stopping) of cell infiltration into peripheral organs, e.g., in the instance of cancer metastasis; 3) inhibition (i.e., slowing to some extent, preferably stopping) of tumor metastasis; 4) inhibition, to some extent, of cell growth; and/or 5) relieving to some extent one or more of the symptoms associated with the disorder.
  • the term IC50 refers to an amount, concentration or dosage of a particular test compound that achieves a 50% inhibition of a maximal response in an assay that measures such response.
  • the "IC 5 0" value of a compound of the invention can be greater for normal cells than for cells exhibiting a proliferative disorder, e.g., breast cancer cells.
  • the value depends on the assay used.
  • a "standard” is meant a positive or negative control.
  • a negative control in the context of HER2 expression levels is, e.g. , a sample possessing an amount of HER2 protein that correlates with a normal cell.
  • a negative control may also include a sample that contains no HER2 protein.
  • a positive control does contain HER2 protein, preferably of an amount that correlates with overexpression as found in proliferative disorders, e.g., breast cancers.
  • the controls may be from cell or tissue samples, or else contain purified ligand (or absent ligand), immobilized or otherwise.
  • one or more of the controls may be in the form of a diagnostic "dipstick.”
  • selective targeting is meant affecting one type of cell to a greater extent than another, e.g., in the case of cells with high as opposed to relatively low or normal HER2 levels.
  • X 1 and X 2 are the same or different and each is nitrogen or -CR 6 ;
  • X 3 is nitrogen or -CR 3 wherein R 3 is hydrogen, OH, a keto tautomer, -OR 8 , -CN, halogen, lower alkyl, or -C(0)R 9 ;
  • X 4 is nitrogen or a group CR 6 when X 3 is nitrogen, and X 4 is -CR 6 R 7 when X 3 is ⁇
  • R 1 is halogen, -OR 8 , -SR 8 , or lower alkyl
  • R 2 is -NR 8 R 10
  • R 5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, each of which is optionally bi-or tricyclic, and optionally substituted with H, halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, araalkyl, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N 3 , -SR 8 , -OR 8 , -CN, -C0 2 R 9 , -N0 2 , or - NR
  • Xi and X 2 are the same or different and each is nitrogen or -CR 6 ;
  • R 1 is halogen, -OR 8 , -SR 8 , or lower alkyl;
  • R 2 is -NR 8 R 10 ;
  • R3 is hydrogen, -OH or keto tautomer, -OR 8 , halogen, -CN, lower alkyl, or-C(0)R9;
  • R 5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, each of which is optionally bi- or tricyclic, and optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 ,
  • R 1 is selected from halogen, hydroxyl, lower alkoxy, lower thioalkyl and C ⁇ alkyl; and R 2 is -NH 2; R3 is hydrogen.
  • R 1 is selected from halogen, hydroxyl, lower alkoxy, lower thioalkyl or CM alkyl; optionally, R 2 is NH 2 .
  • R 4 is -CH 2 -.
  • R 1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R 2 is optionally NH 2 , R 4 is -(CH 2 )-, and R 5 is phenyl, benzyl, or pyridyl, all optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 (or cyclic ethers such as methylenedioxy), -CN, -C0 2 R 9 , -N0 2 , or -NR 8 R 10 ; R 8 is hydrogen, lower alkyl, lower aryl or -(CO)R 9 ; R is lower alkyl, lower aryl, lower heteroaryl, -NR 8 R 10 or -OR 11 ; R 11 is lower alkyl or lower aryl; and R 10 is hydrogen or lower alkyl.
  • R 1 is halogen
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H or halogen
  • R 5 is phenyl optionally substituted with H, halogen, C 1- alkyl, C 1- alkoxy, C alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N0 2 , -NH 2 or -C0 2 R n .
  • R 1 is halogen
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2-halo-3, 5-dimethoxyphenyl optionally substituted with H, halogen, C alkyl, C alkoxy, C M alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N0 2 , -NH 2 , or -C0 2 R n at the para (4-) position.
  • R 1 is chloro
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2- chloro-3, 4,5-trimethoxyphenyl.
  • R 1 is chloro
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2- bromo-3, 4,5-trimethoxyphenyl.
  • R 5 is selected from 2-iodo- 3, 4,5-trimethoxyphenyl, 2-fluoro-3,4,5-trimethoxyphenyl, or 2-bromo-3,4,5- trimethoxyphenyl. Any of the foregoing embodiments can be combined where feasible and appropriate.
  • the invention provides compounds of Formula I:
  • X 1 and X 2 are the same or different and each is nitrogen or -CR 6 ;
  • Ri is halogen, -OR 8 , -SR 8 or lower alkyl;
  • R 2 is -NRsRio;
  • R 3 is hydrogen, OH or a keto tautomer, -OR 8 , halogen, -CN, lower alkyl or -C(0)R 9 ;
  • R 6 is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -NRsRio, -N3, or -C(0)Rc.;
  • R 5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, hal
  • Rj is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R 2 is NH 2 .
  • Ri is halogen; R 2 is NH 2 ; and R 4 is ⁇ CH 2 -.
  • the invention provides compounds of Formula IA:
  • Xi and X 2 are the same or different and each is nitrogen or a group -CR ;
  • R 1 is halogen, -OR 8 , -SR 8 , or lower alkyl;
  • R 2 is -NR 8 R 10 ;
  • R 5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 , -CN, -C0 2 R 9 , -N0 2 , or -NR 8 R 10 ;
  • R 6 is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -NR 8 R 10 ,
  • Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R 2 is NH 2 .
  • Ri is halogen; R 2 is NH 2 , R 4 is -CH 2 -.
  • the invention provides compounds of Formula IB:
  • is selected from hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -CN, and -NHR 8
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NHR 8
  • R 3 is selected from the group consisting of hydrogen, halogen, -SR 8 , -OR 8 , -CN, - C(0)R 9 , -C(0)OH, -N0 2 , -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi
  • R 10 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
  • R 10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
  • R 11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl;
  • R 12 is hydrogen or lower alkyl.
  • each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
  • is hydrogen, halogen, -SH, -OH, or-CN; R 1 is halogen; and R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 .
  • R 1 is chloro or bromo
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9
  • R 3 is hydrogen, halogen, OR 8 , SR 8 , NR 8 R 10 , lower alkyl, lower alkenyl, or lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl.
  • is hydrogen, halogen or -CN;
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 ; and
  • R 4 is -CH 2 -.
  • is hydrogen, halogen, -SH, -OH or -CN;
  • R 1 is halogen;
  • R 2 is -NH 2 ,
  • R 3 is hydrogen, halogen, -OR 8 , -SR 8 , -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, perhaloalkyl, lower aryl, or lower heteroaryl, wherein R 8 is hydrogen, lower alkyl, lower aryl, or -C (O)R ;
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a phenyl having at least three substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a pyridyl having at least two substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituents.
  • is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -CN or -NHR 8 ;
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl;
  • R ,2 is -NH 2;
  • R 4 is -CHR 12 -, -C(O)-, -C(S)-, -S(O)- or -S0 2 -;
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R 5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR 8 , -OR 8 , -CN, - C(0)OH, -C(0)R 9 , -N0 2 , -NR 8 R 10 , lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhalo
  • R 9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR 10 R 10 , or -OR 11 , wherein R 10 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
  • R 10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl;
  • R 11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl;
  • R 12 is hydrogen or lower alkyl; and R° and R 10 when taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N.
  • R 1 is halogen or lower alkyl
  • R 4 is -CHR 12 -
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
  • is hydrogen or -NHR s
  • R 1 is halogen, -OR 1 * , -SR 1 * or lower alkyl
  • R 10 is hydrogen or lower alkyl.
  • is hydrogen;
  • R 1 is halogen;
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and
  • R 10 is hydrogen.
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NH
  • R 3 is selected from the group consisting of hydrogen, halogen, -SR 8 , -OR 8 -CN, - C(0)R 9 , -C(0)OH, -N0 2 , -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R 8 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O
  • R 1 is halogen
  • R 3 is hydrogen, halogen, -OR 8 , -SR 8 , -NR 8 R 8 , lower alkyl, lower alkenyl, or lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R 8 is hydrogen, lower alkyl, lower alkenyl, or lower allcynyl, lower aryl, lower heteroaryl, or - C (O)R 9 ;
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents, and
  • R 10 is hydrogen or lower alkyl.
  • R 1 is halogen;
  • R 3 is hydrogen;
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and
  • R 1 ° is hydrogen.
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NH 2
  • R 3 is selected from the group consisting of hydrogen, halogen, -SR 8 , -OR 8 ,-CN, - C(0)R 9 , -C(0)OH, -NO2, -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R 8 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O,
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate.
  • Illustrative species of the compounds of Formula IB are described in TABLE 1. Prodmgs which can be employed with the compound of the invention include, but are not limited to, those listed in the Definition section above.
  • Xi and X 2 are the same or different and each is nitrogen or -CR ;
  • Ri is halogen, -OR 8 , -SR 8 , or lower alkyl;
  • R 2 is -NRsRio;
  • R 6 is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -NR 8 R ⁇ o, -N 3 , -CN, or -
  • R 5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , OR 8 , -CN, - C0 2 R 9 , -N0 2 , or -NR 8 R ⁇ 0 ;
  • R 8 is hydrogen, lower alkyl, lower aryl, or -(CO)R 9 ;
  • R 9 is lower alkyl, lower aryl, lower heteroaryl, -NR 8 R ⁇ o or-ORn; Rio is hydrogen or lower alkyl, R 11 is lower alkyl or lower aryl.
  • R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R 2 is NH 2 .
  • Ri is halogen; R 2 is NH 2 , R 4 is -CH 2 -.
  • R 4 is -(CH 2 )-;
  • R 5 is phenyl, benzyl, or pyridyl, and is independently optionally substituted with H, halogen, lower alkyl, - SR 8 , -OR 8 (or cyclic ethers such as methylenedioxy), -CN, -C0 2 R 9 , -N0 2 , or - NR 8 R 10 ;
  • R 8 is hydrogen, lower alkyl, lower aryl or -(CO)R 9 ;
  • R 9 is lower alkyl, lower aryl, lower heteroaryl, -NR 8 R 10 or -OR 11 ;
  • R 11 is lower alkyl or lower aryl; and
  • R 10 is hydrogen or lower alkyl.
  • R 1 is halogen
  • R 2 is -NH 2
  • R 4 is - CH 2 -
  • R 6 is H or halogen
  • R 5 is phenyl optionally substituted with H, halogen, C M alkyl, C M alkoxy, C M alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N0 2 , -NH 2 or -C0 2 R ⁇ .
  • R 1 is halogen
  • R 2 is -NH 2
  • R 4 is - CH 2 -
  • R 6 is H
  • R 5 is 2-halo-3,5dimethoxyphenyl optionally substituted with H, halogen, C 1- alkyl, C alkoxy, CM alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N0 2 , -NH 2 , or -C0 2 R ⁇ at the para (4-) position.
  • R 1 is chloro
  • R 2 is -NH 2
  • R 4 is - CH 2 -
  • R 6 is H
  • R 5 is 2-chloro-3,4,5-trimethoxyphenyl.
  • R 1 is chloro
  • R 2 is -NH 2
  • R 4 is - CH 2 -
  • R 6 is H
  • R 5 is 2-bromo-3, 4,5-trimethoxyphenyl.
  • Ri is chloro
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2-iodo-3, 4,5-trimethoxyphenyl.
  • Ri is chloro
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is LT
  • R 5 is 2-fluoro-3, 4,5-trimethoxyphenyl.
  • Ri is bromo
  • R is -NH 2
  • R is -CH 2 -
  • R 6 is H
  • R 5 is 2-bromo-3, 4,5-trimethoxyphenyl.
  • Ri is bromo
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2-iodo-3,4,5-trimethoxyphenyl.
  • i is bromo
  • R 2 is -NH 2
  • R 4 is -CH2-
  • R 6 is H
  • R 5 is 2-iodo-3, 4,5-trimethoxyphenyl.
  • R 1 is bromo
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is H
  • R 5 is 2-fluoro-3, 4,5-trimethoxyphenyl.
  • R 1 is chloro
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is halo
  • R 5 is 2-chloro-3,4,5-trimethoxyphenyl.
  • R 1 is chloro
  • R 2 is NH 2
  • R 4 is -CH 2 -
  • R 6 is halo
  • R 5 is 2-bromo-3, 4,5-trimethoxyphenyl.
  • R 1 is bromo
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R 6 is halo
  • R 5 is 2-chloro-3, 4,5-trimethoxyphenyl.
  • R 1 is bromo
  • R 2 is -NH 2
  • R 4 is -CH 2 -
  • R ⁇ is halo
  • R 5 is 2-bromo-3,4,5-trimethoxyphenyl.
  • the invention provides compounds of Formula IIA:
  • Ri is halogen, -OR 8 , -SR 8 or lower alkyl
  • R 2 is -NR 8 R ⁇ o
  • Re is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -NR 8 R ⁇ o, -N 3 , -CN or C(0)R 9
  • R 5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 , -CN, -C0 2 R 9 , -N0 2 , or -NR 8 R ⁇
  • Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C M alkyl; and R 2 is NH 2 .
  • Ri is halogen; R 2 is NH 2 , R 4 is -CH 2 -.
  • the invention provides compounds of Formula IIB:
  • Ri is halogen, -OR 8 , -SR 8 or lower alkyl
  • R 2 is - NR 8 R I0
  • R 6 is hydrogen, halogen, lower alkyl, -SR 8 , -OR 8 , -NR 8 R ⁇ o, -N 3 , -CN or -C(0)R 9
  • R 5 is alkyl, aryl, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 , -CN, - C0 2 R 9 , -N0 2 , or-NRsRio
  • R is hydrogen, lower alkyl, lower aryl, or
  • R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C M alkyl; and R 2 is -NH 2 .
  • Ri is halogen; R 2 is -NH 2 ; and R 4 is
  • the invention provides compounds of Formula IIC:
  • R 1 is halogen or lower alkyl
  • R 2 is -NR 8 R 10
  • R 4 is -CHR 12 -
  • R 3 is hydrogen, halogen, or -CN
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylal
  • R 1 is halogen or lower alkyl
  • R 2 is -NR 8 R 10
  • R 3 is hydrogen, halogen, or -CN
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylal
  • R 1 is halogen or methyl; and R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 .
  • R 1 is halogen.
  • R 2 is -NH 2 and R 3 is hydrogen.
  • R 1 is halogen;
  • R 2 is -NH 2 ;
  • R 3 is hydrogen;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a phenyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a pyridyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
  • each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
  • R 1 is halogen or methyl; and R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 .
  • R 1 is halogen.
  • R 1 is halogen;
  • R 2 is -NH 2 ;
  • R 3 is hydrogen;
  • R 5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substitute with only two substituents, the two substituents must form part of an optionally substituted fused ring.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a phenyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a pyridyl having 3 to 5 substituents.
  • the invention provides compounds, or polymorphs, solvates, esters, tautomers, pharmaceutically acceptable salts or prodmgs thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is represented by any one of the following formulae:
  • L 1 is halogen, NR 8 R 10 _ triflate, tosylate, or mesylate;
  • R 4 is -CHR 12 -,
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalky
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic.
  • R 4 is -CH 2 -.
  • L 1 is -CI, -Br or NH 2 ;
  • R 5 is aryl or heteroaryl, wherein the aryl group is substituted with 4 to 5 substituents.
  • Y is a substituted purine.
  • the reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
  • the reaction is performed in a solvent that comprises DMF.
  • Compounds for use in the method of treatment are inhibitors of HSP90 of the following Formula IIC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof,
  • R 1 is halogen, -OR 11 , -SR 11 , -NHR 8 , hydrogen, or lower alkyl
  • R 2 is -NR 8 R 10
  • R is hydrogen, halogen, -N 3 , or -CN
  • R 5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N 3 , -SR 8 , -OR 8 , -CN, -C(0)R 9
  • R 3 is hydrogen, halogen or -CN;
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N 3 , -SR 8 , -OR 8 , -CN, -C(0)R 9 , -N0 2 , - NR 8 R 10 , phosphonate, or phosphonic acid.
  • R 1 is halogen or methyl and R 2 is —NHR 8 , where R 8 is hydrogen or -C(0)R 9 .
  • R is -NH 2 and R is hydrogen.
  • R 4 is -CH 2- .
  • R 1 is halogen;
  • R 2 is -NH 2 ;
  • R 3 is hydrogen;
  • R 4 is -CH 2 -;
  • R 5 is aryl and heteroaryl, the aryl and heteroaryl groups are monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with two substituents, the two substituents must form part of an optionally substituted fused ring.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a phenyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a pyridyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
  • Ri is halogen, -OR 8 , -SR 8 or lower alkyl
  • R 2 is -NRsRio
  • R 3 is hydrogen, -OH or keto tautomer, -OR 8 , halogen, -CN, lower alkyl or - C(0)R 9
  • R 5 is alkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , -ORg, - CN, -C0 2
  • Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C M alkyl; and R 2 is NH 2 .
  • Ri is halogen; R 2 is NH 2 , and R 4 is -CH 2 -.
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NHR 8
  • R 3 is selected from the group consisting of hydrogen, halogen, -SR 8 , -OR 8 , -CN, -C(0)R 9 , -C0 2 H, -N0 2 , -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic; R 8 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-2 of the group
  • R 1 is halogen or lower alkyl
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9
  • R 5 is aryl or heteroaryl, each of said aryl and heteroaryl groups is monocyclic or bicyclic.
  • R 2 is -NH 2 ;
  • R 3 is selected from hydrogen, halogen, -SR 8 , -OR 8 , -CN, -NR 8 R 10 , lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic,
  • R 8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl, and R 8 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; and
  • R 5 is aryl or heteroaryl, each of said aryl and heteroaryl groups is monocyclic or bicyclic.
  • R 1 is halogen or lower alkyl
  • R 2 is -NH 2
  • R 4 is -(CH 2 )-
  • R 5 is aryl, heteroaryl, alicyclic or heterocyclic, each of said aryl, heteroaryl alicyclic or heterocyclic groups is monocyclic or bicyclic.
  • R 1 is halogen;
  • R 2 is -NH 2 ;
  • R 3 is hydrogen, halogen, -SR 8 , -OR 8 , lower alkyl, lower aryl, lower heteroaryl, or -NR R , R and R taken together optionally form a ⁇ ng of 3-7 ⁇ ng atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
  • R 1 is chloro or bromo
  • R 5 is a phenyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 5 is a pyridyl having 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NHR 8
  • R 4 is -CHR 12 -, -C(O), -C(S), -S(O)-, or -S0 2 -
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R 5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR 8 , -OR 8 , -CN, -C(0)OH
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 ;
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tri-cyclic; and
  • R 9 is lower alkyl, lower alkenyl, lower alkynl, lower aryl or lower heteroaryl.
  • R 1 is halogen or lower alkyl
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9
  • R 4 is -CH 2 -
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tri-cyclic.
  • Z is L'-R 4 -R 5 ; wherein: L 1 is halogen, -NR R 10 , triflate, tosylate, or mesylate; R 4 is -(CHR 12 )-, -C(O), -C(S), -S(0 , or -S0 2 -; R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R 5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower allcynyl, -SR 8 , -OR 8 , -CN, -C(0)OH, -C(0)R 9 , -N0 2 and -NR 8 R
  • R 8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R 9 ;
  • R 9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR 10 R 10 or -OR 1 * , R 10 and R 10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
  • R 10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
  • R 11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
  • R 12 is hydrogen or lower alkyl
  • R 21 is halogen, -OR 8 , -SR 8 or lower alkyl
  • R 22 is -NR 8 R 10 ;
  • R 23 is hydrogen, -OH or its keto tautomer, -OR 8 , halogen, -CN, lower alkyl, lower aryl or -C(0)R 9 ;
  • R >24 is -CHO, -NH 2 , -N0 2 or -NO;
  • R 25 is halogen or -OH;
  • R 26 is -C(0)NH 2 or C(0)OEt; and R 27 is -NH 2 , -OH or halogen.
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic.
  • L 1 is -CI, -Br or -NH 2 ;
  • R is -CH 2 -; and
  • R 5 is aryl or heteroaryl.
  • Y is a pyrazolopyrimidine.
  • said reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
  • the said reaction is performed in a solvent that comprises DMF.
  • Xi and X 2 are the same or different and each is nitrogen or CR ⁇ ;
  • Ri is halogen, -OR 8 , -SR 8 , or lower alkyl;
  • R 2 is -NR 8 R l0 ;
  • R 5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally bi-or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR 8 , -OR 8 , -CN, -C0 2 R 9 , -N0 2 , or -NR 8 R ⁇ 0 ;
  • R 8 is hydrogen, lower alkyl
  • R 1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C M alkyl; and R 2 is -NH 2 .
  • R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C M alkyl; and R 2 is -NH 2 ; R4 is -CH 2 -, -C(O), -C(S), - S0 2 -. .
  • a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof R 1 is halogen or C alkyl; and R 2 is NH 2 , R t is -CH 2 -.
  • R is -C(O) or -CH 2 -; R 1 is halogen, lower alkoxy or C M alkyl; and R is NH 2 .
  • R 1 is halogen, -OR 11 , -SR 11 or lower alkyl
  • R 2 is -NHR 8
  • R 4 is -CHR 12 -, -C(O)-, -C(S)-, -S(O)- or -S0 2 -
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR 8 , -
  • each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
  • R 1 is halogen; and R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9 .
  • R 1 is chloro or bromo
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9
  • R 4 is lower alkyl.
  • R 2 is -NHR 8 , where R 8 is hydrogen or -C(0)R 9
  • R 4 is -CH 2 -.
  • R 1 is halogen;
  • R 2 is -NH 2 ,
  • R 4 is -CH 2 -;
  • R 5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a phenyl having at least three substituent.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is a pyridyl having at least two substituent.
  • R 1 is chloro or bromo
  • R 2 is -NH 2
  • R 5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituent.
  • the invention provides compounds, or polymo ⁇ hs, solvates, esters, tautomers, pharmaceutically acceptable salts or prodmgs thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is a represented by any one of the following formulae:
  • Z is L'-R 4 -R 5 ; wherein: L 1 is halogen, -NR 8 R 10 ,triflate, tosylate, ormesylate; R 4 is -CHR 12 -, -C(O)-, -C(S)-, -S(0 or -S0 2 -; R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR 8 , -OR 8 , -CN, -C(0)OH, -C(0)R 9 , -N0 2 and -NR 8 R 10 ,
  • L 1 is -CI, -Br or -NH 2 ;
  • R 5 is aryl or heteroaryl.
  • R 4 is -CH 2 -.
  • R 5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic.
  • Li is -CI, -Br or -NH 2 ; R 4 is -CH 2 -; and R 5 is aryl or heteroaryl.
  • Y is a triazolopyrimidine.
  • Y is a triazole.
  • Y is a pyrimidine.
  • the reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
  • the reaction is performed in a solvent that comprises DMF.
  • Compounds of interest in Table 1 are: 2, 3, 17, 18, 27, 28, 62, 63, 77, 78, 92, 93, 129, 130, 238, 239, 242, 243, 245, 246, 247, 248, 249, 250, 251, 252, 253, 267, 268, 287, 288 291 , 292, 293, 294, 295, 296, 297, 298 312, 313, 332, 333, 334, 335, 336, 337, 338, 339 351, 352, 365, 366, 384, 385, 398, 3.99 400, 401, 402, 403, 404, 405, 417, 418, 431, 432 433, 434, 435, 436, 437, 438, 450, 451 464, 465, 483, 484, 497, 498, 530, 531, 549, 550 562, 563, 574, 575, 577, 578, 589, 590 592, 593, 604, 605, 607,
  • Compounds of interest in Table 4 are: compounds 2, 3, 13, 82, 83, 162, 163, 168, 169, 174, 175,180, 181,186, 187,192, 193,198,199,204,205,210,211,228,229,230,231, 232, 233, 234, 235, 236, 237, 250, 251, 262, 263, 268, 269, 274, 275, 280, 281, 286, 287, 292, 293, 298, 299, 304, 305, 310, 311, 316, 317, 328, 329, 338, 372, 373, 380 and 381 (with those selected being 162, 163, 168, 169, 174, 175, 180, 181, 186, 187, 192, 193, 198, 199, 204, 205, 228, 229, 262, 263, 268, 269, 274, 275, 280, 281, 286, 287, 292, 293, 316, 317, 328, and 329.) III.
  • Synthesis of the Compounds of the Invention may be accomplished by various methods known in the art, including those described in, for example, Montgomery, J. Med. Pharm. Chem., 1962, 5, 15-24; Sircar, U.S. Patent 4,772,606, 1988; Sircar, U.S. Patent 4,748,177, 1988; Hans, U.S. Patent 5,110,818, 1992; Gillespie, PCT publication No. WO 02/055521; Matsuda, JP 10025294 A2, 1998; Hans, U.S. Patent 5,110,818, 1992 and U.S. Publication No. US 2003/0078413.
  • the synthesis of the several embodiments of the invention is illustrated. The process is applicable to other subgenus. A.
  • the starting materials or the intermediates of Formula 1, 4, 5, and I can exist in tautomeric forms as shown in Fig. 1, and both forms are indiscriminately used in this patent.
  • Method 1.1.3 The compounds of Formula 4 can be obtained by treatment of a -haloketone of Formula 8 wherein X is a halogen with ammonia or an synthetic equivalent thereof.
  • Method 1.1.5 The compounds of Formula 4 wherein R 3 is H can be obtained by Pd-mediated intramolecular cyclization of alkynes of Formula 10, wherein Z in as electron- withdrawing group such as, e.g., tosyl-, or EtC00 2 -.
  • Method 1.1.6 The compounds of Formula 4 wherein R 3 is AcO- can be obtained by intramolecular Friedel-Crafts acylation of precursors of Formula 11 (E. D. Edstrom, J. Org. Chem. 1993, 58, 403).
  • Method 1.1.7 The compound of Formula 4, wherein R° is H, R 6 is OH, and R 7 is NH 2 , can be prepared by treating/ the compound of Formula 12 with an -haloaldehydes of the formula R 3 -CHX-CHO. See, D.M. Williams, J. Chem. Soc, Perkin Trans 1, 1997, 1171; C. J. Barnett, Org. Proc Res. Devop. 1999, 3, 184; A. Gangjee, J. Med. Chem. 2001, ⁇ , 1993.
  • Method 1.1.8 The compounds of Formula 4, wherein R 6 is OH and R 7 is NH 2 can be obtained by treating the compound of Formula 13 with an aldehyde of the formula R 3 -CHO. See,
  • Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesylate, triphenylphosphonium (generated under Mitsunobu conditions, e.g. PPh 3 /DEAD) etc. See Kasibhatla, PCT publication number WO 03/037860.
  • electrophiles can be prepared from the substituted benzene derivatives using various methods reported in the literature, see Jerry March, Advanced Organic
  • the compound NH 2 -R 4 -R 5 is obtained by treating L'-R 4 -R 5 with ammonia at temperatures of 20-160 °C in a pressure vessel.
  • the corresponding amines where L 1 is -NH 2 can be prepared by a variety of methods, for instance from compounds where L 1 is leaving group such as chloride, bromide, tosylate, mesylate etc. using ammonia, or with sodium azide followed by hydrogenation. 3. Further Elaboration of the ring systems 3.1.
  • Compounds of Formula IA, wherein R° is H can be lithiated and treated with electrophiles (e.g., I 2 , ArCHO) to provide compounds of Formula IA wherein R° is, e.g. - I or -CH(OH)Ar.
  • electrophiles e.g., I 2 , ArCHO
  • is, e.g. - I or -CH(OH)Ar.
  • Compounds of Formula ⁇ A, wherein R 1 is -NH 2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosylating agent (NaN0 2 /H + , NOBF 4 , RONO) and a halogen donor (BF 4 _ , CuX 2 , SbX 3 where X is halogen).
  • Compounds of Formula IA, wherein R 1 is alkyl can be prepared from compounds of Formula 4 where R 1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy, J. Med. Chem. 1999, 42, 2064).
  • R 1 is a halide
  • R 1 is -NH 2 , -OH, -SH, -OR 8 , -SR 8 with standard reagents, e.g., NH 3 , NaOH, thiourea, R 8 0 " , R 8 S " , with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, H) (e.g., B. G. Ugarkar, J. Med. Chem. 2000, 43, 2883-2893 and 2894-2905).
  • a catalyst e.g. Pd, Ni, Cu, Lewis acid, H
  • Compounds of Formula IA, wherein R 2 is -NH 2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosykting agent (Na VH 1" , NOBF 4 , RONO) and a halogen donor (BF4-, CuX 2 , SbX 3 ).
  • Compounds of Formula IA, wherein R 2 is a halide can be converted to compounds wherein R 2 is -NH 2 , -OH, -SH, -OR 8 , -SR 8 with standard reagents, e.g.
  • Compounds of Formula IA, wherein R 3 is Br can be metalkted with BuLi, and treated with an electrophile such as Mel to give a compound of Formula IA, wherein R 3 is methyl.
  • Compounds of Formula IA, wherein R 1 is -CI and R 3 is -Br can undergo selective metaltechnisch at R 3 (J. S. Pudlo, J. Med. Chem. 1990, 33, 1984).
  • Compounds of Formula IA, wherein R° is -OH and R 3 is H can be be monalkykted or bis-alkykted to give compounds of Formula ID, wherein R 1 is an alkyl group. The alkylation can be effected in the presence of a base such as KHMDS, LHMDS, LDA etc.
  • Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate or mesykte.
  • R 5 R 5 can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkykom/acylation, etc or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry.
  • the heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H 2 0 2 , 0 3 , MCPBA etc. in polar solvents such as CH 2 C1 2 , CHC1 3 , CF 3 COOH etc. See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 7.
  • Scheme 7 Permutations of the order of events As mentioned above, the events (1) assembly of the bicyclic system (2) appendage of the R 5 -R 4 - moiety, and (3) further elaboration of the ring systems do not necessarily have to be made in the sequence (l)-(2)-(3), and it may be beneficial to proceed in a different sequence.
  • Scheme 8 shows a synthesis in which the order of events is not (l)-(2)-(3), but is (2)-(l)-(3). First R 5 is appended via an aromatic nucleophilic substitution, then the bicyclic system is constructed, and finally it is elaborated.
  • Method 4.1.1 The compound of Formula 18, wherein R is CI and R is NH 2 , can be prepared by treating the compound of Formula 17 with R 5 -R 4 -NH 2 in butanol at reflux in presence of a base such as K 2 C0 3 , Cs 2 C0 3 or iPrNEt 2 . (A.B. Reitz J. Med. Chem. 1994, 37, 3561).
  • Method 4.1.2 The compound of Formula 19, wherein R 1 is CI and R is NH 2 , can be prepared by refluxing the compound of Formula 18 in chloroform or dichloroethane in presence of an halogenating reagent such as bromine, N-bromosuccinimide, iodine or N- iodosuccinimide and an acid such as acetic acid or p-toluenesulfonic acid. (A.P. Phillips J. Am. Chem. Soc. 1952, 74, 3922).
  • an halogenating reagent such as bromine, N-bromosuccinimide, iodine or N- iodosuccinimide
  • an acid such as acetic acid or p-toluenesulfonic acid.
  • Method 4.1.3 The compound of Formula 20, wherein R 1 is CI and R 2 is NH 2 , can be prepared by coupling the compound of Formula 19 with trimethylsilylacetylene under Sonogashira conditions followed by hydroboration using dichlorohexylborane and oxidation using hydrogen peroxide in presence of sodium hydroxide. (Sonogashira coupling: E. C. Taylor Tetrahedron , 1992, 48, 8089. Hydroboration/oxidation: G. Zweifel J. Am. Chem. Soc. 1976, 98, 3184).
  • Method 4.1.4 The compound of Formula 21, wherein R 1 is CI and R is NH 2 , can be prepared by heating the compound of Formula 20 in a polar aprotic solvent such as THF, DME or dioxane in presence of oxalyl chloride, thionyl chloride, mesyl chloride or alkyl chloroformate and a base such as iPrNEt 2 or pyridine. It can also be prepared by treating the compound of Formula 20 with coupling reagents such DCC/HOBt, DCC/DMAP or EDCI/HOBt. (R.C. Larock Comprehensive Organic Transformations Second Edition, pi 870).
  • Scheme 9 Method 4.3
  • Scheme 10 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (l)-(3)-(2)-(3).
  • the bicyclic ring is constructed, then it is elaborated, then the R 4 -R 5 moiety is appended, and finally the bicyclic ring system is further elaborated (deprotection).
  • P Ac, t-Boc, etc.
  • R is for instance a pyridine, it can be converted to a N-oxide either before or after alkylation.
  • Method 1 From purines: The compounds of Formula IIC (see, Scheme 12) can be synthesized from the commercially available starting heterocycle, for example compounds of Formula 2 where R 6 is -CI, -Br or -OH, R 7 is -NH 2 and R 8 is -H are commercially available from Aldrich, AlfaAesar, etc. Accordingly, Formula 2 can be alkykted in the presence of a base such as K 2 C0 3 , NaH, Cs 2 C0 3 , DBU etc.
  • a base such as K 2 C0 3 , NaH, Cs 2 C0 3 , DBU etc.
  • Leaving groups include but are not
  • Scheme 12 limited to, e.g., halogen, triflate, tosylate , mesykte etc See Kasibhatla, PCT publication number WO 03/037860.
  • Compounds of Formula I, wherein R 1 is -OH can be converted to halides using standard conditions POCl 3 , POBr 3 etc with/without the presence of base such as Et N, N,N-diethykniline, (i-pr) 2 NEt etc. in polar solvents such as CH 3 CN, CH 2 C1 2 etc.
  • R 1 is -OR 11 , -SR 11 , or -NHR 8 where R 11 is alkyl, R 8 is hydrogen, lower alkyl, lower aryl, or -C(0)R 9 , where R 9 is lower alkyl, lower aryl, lower heteroaryl, -NR 10 R 10 , or -OR 11 , where R 10 is independently hydrogen or lower alkyl, can be prepared from compounds of Formula IIC wherein R 1 is halogen reacting with HOR 1 * , HSR 1 ' or NH 2 R 8 in presence of a base such as K 2 C0 3 or NaH and a polar solvent such as DMF or THF.
  • a base such as K 2 C0 3 or NaH
  • a polar solvent such as DMF or THF.
  • Compounds of Formula IIC where R 8 is -C(0)R 9 can be prepared when R 1 is hydroxyl by simple acylation.
  • Compounds of Formula IIC where R 1 is alkyl can be prepared from compounds of Formula II where R 1 is halogen and trialkyl aluminum or dialkyl zinc. (See Holy, J. Med. Chem. 1999, 42, 2064).
  • R 5 especially when it is aryl or heteroaryl can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkykom/acytechnisch, etc. or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry.
  • the heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H 2 0 2 , 0 3 , MCPBA etc in polar solvents such as CH 2 C1 2 , CHC1 3 , CF 3 COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19.
  • Compounds of Formula IIC where R 3 is halogen can be prepared from Formulae 1 or 2 using halogenating agents such as Br 2 , NBS, NCS, NIS etc. in polar solvents such as DMF, water, or suitable buffer solution. See Herdewijn, J. Med. Chem. 1995, 38, 3838.
  • compounds of Formula 2 where R 8 is iodo can also be made using procedures known in the literature, e.g., Burger, J. Org. Chem. 2000, 65, 7825. These can be further modified as needed; for example, where R 3 is -N 3 , or -CN by reacting with an azide such as NaN 3 , LiN 3 etc. or cynide such as KCN or NaCN in polar solvents such as DMF, DMSO etc. See Halbfinger, J. Med. Chem. 1999, 42, 1625; Jacobson, J. Med. Chem. 1999, 42, 5325. 2.
  • compounds of Formula IIC can be further modified as necessary.
  • compounds of Formula IIC can also be synthesized from Formula 7, 2- amino-4, 6-dichloro pyrimidine (see Scheme 14). Reaction of Formula 7 withNH 2 -R 4 - R 5 in solvents such as EtOH, BuOH etc. in presence of organic bases such as Et 3 N, (ipr) 2 Net, etc. followed by reaction with diazonium salt prepared from 4-chloroaniline
  • compounds of Formula 8 where R 16 is NH 2 can be made from the commercially available 2,5-diamino-4,6-dihydroxy pyrimidine as described in Daluge, U.S. Patent 5,917,042 (1999), See Scheme 15.
  • Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesykte etc. to give compounds of Formula 10.
  • the ring closure can be achieved using many methods reported in the literature, Alhede, J. Org. Chem., 1991, 2139 and references cited therein to give guanines of Formula II, wherein R 1 is OH. These compounds can be converted to the
  • these steps can be reversed as shown in Scheme 16 via Formula 11 .
  • we can also construct these 2-aminopyrimidine rings from Formula 4, wherein R 14 is -OH or halide, R 13 is -C(0)OEt and R 15 is -H by reacting with guanidine hydrochloride as described in Chowdhury, J. Med. Chem. 1999, 42, 4300.
  • Benzyl type electrophiles (Fig. 2 supra) can be prepared as described above in Section III.A.2.2.1 using various methods reported in the literature, see Jerry March, Advanced Organic Chemistry, 4* edition; Larock, Comprehensive Organic Transformations, 1989,VCH, New York.
  • Li is -Br can be prepared by reduction followed by halogenation of the benzoic acid or aldehyde derivatives .
  • These benzyl derivatives can also be prepared by benzylic oxidation or benzylic halogenation.
  • benzyl ring can be done before or after the corresponding amines where Li is -NH 2 can be prepared from the compounds where Li is leaving group such as chloride, bromide, tosylate, mesykte etc. using ammonia.
  • Synthesis of pyridyl methyl type electrophile Pyridyl methyl type electophiles can be prepared from many methods reported in the literature including those identified in Section III.A.2.2.2. Further modification of the pyridyl ring can be done after the purine alkylation see Scheme 16.
  • the skrting materials and the intermediates of the Formula 1, 2, 3, or 4 can exist in tautomeric forms as shown in Fig 5, and both forms are indiscriminately used in this patent.
  • Scheme 18 The compounds of Formula 3 can be prepared from pyrimidines as outlined in Scheme 18. For instance:
  • Method 1.1.1 The compound of Formula 3, wherein R 6 is -CI, R 7 is -NH 2 , and R 3 is -H, is readily prepared by treating 2-amino-4,6-dichloro-pyrimidine-5-carbaldehyde (Formula 1) with hydrazine, see, F. Seek , Heterocycles 1985, 23, 2521; F. Seek, Helv. Chim. Acta 1986, 69, 1602; and R O. Dempcy, WO 03/022859.
  • Method 1.1.2 The compounds of Formula 3, wherein R 6 is CI, R 7 is NH 2 and R 3 is alkyl, aryl, or heteroaryl have not been previously reported. They can be made by converting a compound of Formula 1 to a compound of Formula 5 in two steps: i) Nucleophilic addition to the carbonyl group; and ii) Oxidation of the resulting alcohol. In a subsequent step, the compound of Formula 5 is converted to the compound of Formula 3 by reaction with hydrazine, or an equivalent thereof.
  • Method 1.1.3 The compounds of Formula 3 wherein R 3 is NH 2 can be obtained by treatment of a nitrile of Formula 6 with hydrazine (See A. M.
  • Method 1.1.4 The compounds of Formula 3 wherein R is OH can be obtained by treatment of an acid, ester, or activated ester (or equivalent thereof) of Formula 7 with hydrazine (Ciba, Patent UK 884,151 (1961)).
  • the compounds of Formula 3 can also be made from pyrazoles of Formula 2 (Scheme 19). There are a variety of methods by which the 6-membered ring can be formed (e.g. R. J. Bontems, J. Med. Chem, 1990, 33, 211 and references therein). For instance:
  • Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate , mesykte, triphenylphosphonium (generated under Mitsunobu conditions, e.g. PPh 3 /DEAD) etc. (See Kasibhatla, WO 03/037860.) / ⁇ I,
  • Compounds of Formula IIIA, wherein R 1 is alkyl can be prepared from compounds of Formula 3 where R 1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy, J. Med. Chem. 1999, 42, 2064).
  • Compounds of Formula IIIA, wherein R 1 is a halide can be converted to compounds wherein R 1 is -NH 2 , -OH, -SH, -OR, -SR with standard reagents, e.g. NH 3 , NaOH, thiourea, RO " , RS “ , with or without a catalyst (e.g.
  • R 3 Compounds of Formula IIIA, wherein R 3 is H, can be converted to compounds of Formula IIIA wherein R 3 is a halogen (e.g. NCS, NBS, NIS, Br 2 , ICl, I 2 /KOH) (See F. Seek et al, Helv. Chim. Acta 1999, 82, 105).
  • R 3 is a halogen
  • Compounds of Formula IIIA, wherein R 3 is a halogen can be functionalized by Pd-cakyzed reactions ((a) Sonogashira coupling: E. C. Taylor et al, Tetrahedron , 1992, 48, 8089. (b)carboxytechnisch: J. W.
  • R 3 is MeO
  • R 5 especially when it is aryl or heteroaryl, can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkylation/acylation, etc. or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry.
  • heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H 2 0 2 , 0 3 , MCPBA etc. in polar solvents such as CH 2 C1 2 , CHC1 3 , CF 3 COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 21.
  • Scheme 21 Permutations of the order of events As mentioned above, the events (1) assemby of the bicyclic system (2) appendage of the R 5 -R 4 - moiety, and (3) further elaboration of the ring systems do not necessarily have to be made in the sequence of (l)-(2)-(3), and it may be beneficial to proceed in a different sequence.
  • Scheme 6 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (l)-(3)-(2). First the bicyclic system is prepared, then it is elaborated, and finally R 5 is appended via an alkylation.
  • Scheme 23 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (2)-(l)-(3).
  • R 5 group is appended to a pyrimidine via an aromatic nucleophilic substitution, then the bicyclic ring system is constructed, and finally a series of functional group interconversions yields the compound of Formula IIIA.
  • P Protecting Group
  • R 5 is, for instance, a pyridine, it can be converted to a N-oxide either before or after alkylation.
  • Formula 2 where R 11 is -N0 2 may then be reduced with zinc and formic acid or sodium dithionite to give compounds of Formula 2 where R u is -NH 2 , see Dempcy, U.S. Publication No. 2003/0078413 Al.
  • Compounds of Formula IVA can then be prepared by diazotization with an alkali metal nitrite such as NaN0 2 in inorganic acids such as HC1, followed by in situ cyclization. See Beauchamp, U.S. Patent 4,714,701; Meier, U.S. Patent 5,204,353. These compounds of Formula IVA can be further modified as necessary.
  • Formula 2 where R 11 is H can be treated with diazonium salts such as 4- chloroaniline diazonium salt prepared from 4-chloroaniline and NaN0 2 inorganic acids such as HC1 to give pyrimidine 5-azo- analog, that can be reduced with zinc dust in EtOH/AcOH (1:1) solution to give compounds of Formula 2, where R n is -NH 2 , see Meier, U.S. Patent 5,204,353.
  • compounds of Formula IVA can be prepared from the commercially available substituted diamino pyrimidines compounds of Formula 1 where R 9 is -OH or halogen, R 10 is amino or protected amino or any group that can be converted to amino, such as SMe, R 11 & R 12 are -NH 2 , (see Scheme 26) following the diazotization method described earlier in Method 1 to give compounds of Formula 4.
  • Formula 4 can be alkykted in the presence of a base such as K 2 C0 3 , NaH, Cs 2 C0 3 , DBU etc. with/without the presence of halide such as Nal, KI, (Bu) 3 NI etc., and in a polar solvent such as DMF, THF, DMSO etc.
  • L'-R 4 -R 5 where L 1 is a leaving group. Leaving groups include but are not limited to, e.g. , halogen, triflate, tosylate, mesykte etc. See Kasibhatla, PCT WO 03/037860.
  • Compound of Formula I can also be prepared from compounds of Formula D using Mitsunobu alkylation conditions using L ⁇ ⁇ -R 5 where L 1 is hydroxyl. See Kozai, Chem. Pharm. Bull, 1999, 47(4), 574-575).
  • Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesykte etc. to give compounds of Formula 6.
  • the ring closure can be achieved using many methods reported in the literature, Alhede, J. Org. Chem., 1991, 2139 and references cited therein to give compounds of Formula I, wherein R 1 is -OH. These compounds can be converted to the compounds of Formula I, wherein R 1 is -Cl using POCl 3 as described earlier. Alternately, we can also construct from Formula 3, wherein R 14 is -OH or halide, R 13 is -C(0)OEt by reacting with guanidine hydrochloride as described in Chowdhury, J. Med. Chem. 1999, 42, 4300.
  • the compound R 4 -R 5 -NH 2 is obtained by treating R 4 -R 5 -L * with ammonia at temperatures of 20-160 °C in a pressure vessel, wherein L 1 is leaving group such as chloride, bromide, tosylate, mesykte etc. using ammonia, or with sodium azide followed by hydrogenation. 4. Further elaboration of the ring systems. These modifications can be done at any stage depending upon the incompatibility of the functional groups present. 4.1 Functional group interconversions of R 1 Compounds of Formula IVA, wherein R is -OH, can be converted to halides using standard conditions POCl 3 , POBr etc.
  • Compounds of Formula IVA, wherein R 1 is alkyl can be prepared from compounds of Formula 4 where R 1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy J. Med. Chem. 1999, 42, 2064).
  • Compounds of Formula IVA, wherein R 1 is a halide can be converted to compounds wherein R 1 is -NH 2 , -OH, -SH, -OR 8 , -SR 8 with standard reagents, e.g. NH 3 , NaOH, thiourea, R 8 0 " , R 8 S " , with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, ⁇ t) (e.g. B. G. Ugarkar, /.
  • a catalyst e.g. Pd, Ni, Cu, Lewis acid, ⁇ t
  • Compounds of Formula IVA, wherein R 2 is -NH 2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (Cl, Br, I) by means of a nitrosykting agent (Na VH*, NOBF 4 , RONO) and a halogen donor (BF4 " , CuX 2 , SbX 3 where Xis a halogen).
  • Compounds of Formula IVA, wherein R 2 is a halide can be converted to compounds wherein R 2 is -NH 2 , -OH, -SH, -OR 8 , -SR 8 with standard reagents, e.g. NH 3 ,
  • R 5 R 5 can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkykom/acytechnisch, etc or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry.
  • the heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H 2 0 2 , 0 3 , MCPBA etc. in polar solvents such as CH 2 C1 2 , CHC1 3 , CF 3 COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 28.
  • R 5 is for instance a pyridine, it can be converted to a N-oxide either before or after alkylation.
  • the present invention is directed to the clinical use of the heterocyclics, in particular, the pyrazolopyrimidines and their related analogs of Formulae A, I-IV, and their polymorphs, solvates, esters, tautomers, diastereomers, enantiomers, pharmaceutically acceptable salts and prodrugs thereof, for use in treatment or prevention of diseases that are HSP90-dependent.
  • a disorder such as inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorder, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease.
  • the fibrogenetic disorders include but are not limited to scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary f ⁇ brosis.
  • the present invention features pharmaceutical compositions comprising the compound of Formulae A, I-IV, or a polymo ⁇ h, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt thereof, or prodrug thereof, of any of the preceding aspect and embodiments and one or more pharmaceutical excipients.
  • Those of ordinary skill in the art are familiar with formulation and administration techniques that can be employed with the compounds and methods of the invention, e.g., as discussed in Goodman and Gilman, The Pharmacological Basis of Therapeutics, (current edition), Pergamon; and Remington's, Pharmaceutical Sciences (current edition), Mack Publishing Co., Easton, PA.
  • the compounds utilized in the methods of the instant invention may be administered either alone or in combination with pharmaceutically acceptable carriers, excipients or diluents, in a pharmaceutical composition, according to standard pharmaceutical practices.
  • the compounds can be administered orally or parenterally, including the intraventous, intramuscular, intraperitoneal, subcutaneous, rectal and topical routes of administration.
  • the therapeutic or pharmaceutical compositions of the invention can be administered locally to the area in need of treatment.
  • This may be achieved by, for example, but not limited to, local infusion during surgery, topical application, e.g., cream, ointment, injection, catheter, or implant, said implant made, e.g., out of a porous, non-porous, or gelatinous material, including membranes, such as siakstic membranes, or fibers.
  • topical application e.g., cream, ointment, injection, catheter, or implant
  • said implant made, e.g., out of a porous, non-porous, or gelatinous material, including membranes, such as siakstic membranes, or fibers.
  • the administration can also be by direct injection at the site (or former site) of a tumor or neoplastic or pre-neopkstic tissue.
  • the compounds or compositions of the invention can be delivered in a vesicle, e.g., a liposome (see, for example, Langer, Science 1990, 249, 1527-1533; Treat et al., Liposomes in the Therapy of Infectious Disease and Cancer, Lopez- Bernstein and Fidler, Ed., Liss, N.Y., pp. 353-365, 1989).
  • a vesicle e.g., a liposome
  • the compounds and pharmaceutical compositions used in the methods of the present invention can also be delivered in a controlled release system.
  • a pump may be used (see, Sefton, 1987, CRC Crit. Ref. Biomed. Eng. 14:201; Buchwald et al. Surgery, 1980, 88, 507; Saudek et al.
  • compositions used in the methods of the instant invention can also contain the active ingredient in a form suitable for oral use, for example, as tablets, troches, lozenges, aqueous or oily suspensions, dispersible powders or granules, emulsions, hard or soft capsules, or syrups or elixirs.
  • compositions intended for oral use may be prepared according to any method known to the art for the manufacture of pharmaceutical compositions, and such compositions may contain one or more agents selected from the group consisting of sweetening agents, flavoring agents, coloring agents and preserving agents in order to provide pharmaceutically elegant and palatable preparations.
  • Tablets contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for the manufacture of tablets.
  • excipients may be, for example, inert diluents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, such as microcrystalline cellulose, sodium crosscarmellose, corn starch, or alginic acid; binding agents, for example starch, gelatin, polyvinyl-pyrrolidone or acacia, and lubricating agents, for example, magnesium stearate, stearic acid or talc.
  • the tablets may be un-coated or coated by known techniques to mask the taste of the drug or delay disintegration and absorption in the gastrointestinal tract and thereby provide a sustained action over a longer period.
  • a water soluble taste masking material such as hydroxypropylmethyl-cellulose or hydroxypropylcellulose, or a time delay material such as ethyl cellulose, or cellulose acetate butyrate may be employed as appropriate.
  • Formulations for oral use may also be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water soluble carrier such as polyethyleneglycol or an oil medium, for example peanut oil, liquid paraffin, or olive oil.
  • Aqueous suspensions contain the active material in admixture with excipients suitable for the manufacture of aqueous suspensions.
  • excipients are suspending agents, for example sodium carboxymethylcellulose, methylcellulose, hydroxypropylmethyl-cellulose, sodium alginate, polyvinyl-pyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents may be a naturally-occurring phosphatide, for example lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethylene-oxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyethylene sorbitan monooleate.
  • dispersing or wetting agents may be a naturally-occurring phosphatide, for example lecithin,
  • the aqueous suspensions may also contain one or more preservatives, for example ethyl, or n-propyl p-hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose, saccharin or aspartame.
  • Oily suspensions may be formulated by suspending the active ingredient in a vegetable oil, for example arachisd oil, olive oil, sesame oil or coconut oil, or in mineral oil such as liquid paraffin.
  • the oily suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation.
  • compositions may be preserved by the addition of an anti-oxidant such as butykted hydroxyanisol or alpha-tocopherol.
  • Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified by those already mentioned above. Additional excipients, for example sweetening, flavoring and coloring agents, may also be present.
  • an anti-oxidant such as ascorbic acid.
  • the compounds and pharmaceutical compositions used in the methods of the instant invention may also be in the form of an oil-in-water emulsions.
  • the oily phase may be a vegetable oil, for example olive oil or arachis oil, or a mineral oil, for example liquid paraffin or mixtures of these.
  • Suitable emulsifying agents may be naturally- occurring phosphatides, for example soy bean lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate, and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate.
  • the emulsions may also contain sweetening agents, flavoring agents, preservatives and antioxidants.
  • Syrups and elixirs may be formulated with sweetening agents, for example glycerol, propylene glycol, sorbitol or sucrose. Such formulations may also contain a demulcent, a preservative, flavoring and coloring agents and antioxidant.
  • the pharmaceutical compositions may be in the form of a sterile injectable aqueous solution. Among the acceptable vehicles and solvents that may be employed are water, Ringer's solution and isotonic sodium chloride solution.
  • the sterile injectable preparation may also be a sterile injectable oil-in-water microemulsion where the active ingredient is dissolved in the oily phase. For example, the active ingredient may be first dissolved in a mixture of soybean oil and lecithin.
  • the oil solution then introduced into a water and glycerol mixture and processed to form a microemulsion.
  • the injectable solutions or microemulsions may be introduced into a patient's blood-stream by local bolus injection. Alternatively, it may be advantageous to administer the solution or microemulsion in such a way as to maintain a constant circulating concentration of the instant compound.
  • a continuous intravenous delivery device may be utilized. An example of such a device is the Deltec CADD-PLUSTM model 5400 intravenous pump.
  • the pharmaceutical compositions may be in the form of a sterile injectable aqueous or oleagenous suspension for intramuscular and subcutaneous administration.
  • the sterile injectable preparation may also be a sterile injectable solution or suspension in a non-toxic parenterally-acceptable diluent or solvent, for example as a solution in 1,3- butane diol.
  • sterile, fixed oils are conventionally employed as a solvent or suspending medium.
  • any bland fixed oil may be employed including synthetic mono- or diglycerides.
  • fatty acids such as oleic acid find use in the preparation of injectables.
  • the compounds of the present invention used in the methods of the present invention may also be administered in the form of suppositories for rectal administration of the drug.
  • compositions can be prepared by mixing the inhibitors with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug.
  • suitable non-irritating excipient include cocoa butter, glycerinated gelatin, hydrogenated vegetable oils, mixtures of polyethylene glycols of various molecular weights and fatty acid esters of polyethylene glycol.
  • creams, ointments, jellies, solutions or suspensions, etc. containing a compound or composition of the invention can be used.
  • topical application can include mouth washes and gargles.
  • the compounds used in the methods of the present invention can be administered in intranasal form via topical use of suitable intranasal vehicles and delivery devices, or via transdermal routes, using those forms of transdermal skin patches well known to those of ordinary skill in the art.
  • the dosage administration will, of course, be continuous rather than intermittent throughout the dosage regimen.
  • the methods, compounds and compositions of the instant invention may also be used in conjunction with other well known therapeutic agents that are selected for their particular usefulness against the condition that is being treated.
  • the instant compounds may be useful in combination with known anti-cancer and cytotoxic agents.
  • the instant methods and compounds may also be useful in combination with other inhibitors of parts of the signaling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation.
  • the methods of the present invention may also be useful with other agents that inhibit angiogenesis and thereby inhibit the growth and invasiveness of tumor cells, including, but not limited to VEGF receptor inhibitors, including ribozymes and antisense targeted to VEGF receptors, angiostatin and endostatin.
  • antineopkstic agents examples include, in general, and as appropriate, alkykting agents, anti-metabolites, epidophyllotoxins, antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents and haematopoietic growth factors.
  • alkykting agents include, in general, and as appropriate, alkykting agents, anti-metabolites, epidophyllotoxins, antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents and haematopoietic growth factors.
  • exemplary classes of antineoplastic include the anthracyclines, vinca drugs, mitomycins, bleomycins, cytotoxic nucleosides, epothilones, discodermol
  • Particularly useful members of those classes include, for example, carminomycin, daunorubicin, aminopterin, methotrexate, methopterin, dichloromethotrexate, mitomycin C, porfiromycin, 5-fluorouracil, 6-mercaptopurine, gemcitabine, cytosine arabinoside, podophyllotoxin or podo-phyllotoxin derivatives such as etoposide, etoposide phosphate or teniposide, melphakn, vinbkstine, vincristine, leurosidine, vindesine, leurosine, paclitaxel and the like.
  • antineoplastic agents include estramustine, carbopktin, cyclophosphamide, bleomycin, gemcitibine, ifosamide, melphakn, hexamethyl mekmine, thiotepa, cytarabin, idatrexate, trimetrexate, dacarbazine, L-asparaginase, camptothecin, CPT-11, topotecan, ara-C, bicalutamide, flutamide, leuprolide, pyridobenzoindole derivatives, interferons and interleukins.
  • the daily dosage will normally be determined by the prescribing physician with the dosage generally varying according to the age, weight, and response of the individual patient, as well as the severity of the patient's symptoms.
  • a suitable amount of compound is administered to a mammal undergoing treatment for cancer, for example, breast cancer.
  • Administration typically occurs in an amount of between about 0.01 mg/kg of body weight to about 100 mg/kg of body weight per day (administered in single or divided doses), more preferably at least about 0.1 mg/kg of body weight per day.
  • a particular therapeutic dosage can include, e.g., from about 0.01 mg to about 1000 mg of compound, and preferably includes, e.g., from about 1 mg to about 1000 mg.
  • the quantity of active compound in a unit dose of preparation may be varied or adjusted from about 0.1 mg to 1000 mg, preferably from about 1 mg to 300 mg, more preferably 10 mg to 200 mg, according to the particular application.
  • the amount administered will vary depending on the particular IC 5 0 value of the compound used and the judgment of the attending clinician taking into consideration factors such as health, weight, and age. In combinational applications in which the compound is not the sole active ingredient, it may be possible to administer lesser amounts of compound and still have therapeutic or prophylactic effect.
  • the pharmaceutical preparation is in unit dosage form.
  • the preparation is subdivided into unit doses containing appropriate quantities of the active component, e.g., an effective amount to achieve the desired purpose.
  • the actual dosage employed may be varied depending upon the requirements of the patient and the severity of the condition being treated. Determination of the proper dosage for a particular situation is within the skill of the art. Generally, treatment is initiated with smaller dosages which are less than the optimum dose of the compound. Thereafter, the dosage is increased by small amounts until the optimum effect under the circumstances is reached. For convenience, the total daily dosage may be divided and administered in portions during the day if desired.
  • the amount and frequency of administration of the compounds and compositions of the present invention used in the methods of the present invention, and if applicable other chemotherapeutic agents and/or radiation therapy, will be regulated according to the judgment of the attending clinician (physician) considering such factors as age, condition and size of the patient as well as severity of the disease being treated.
  • the chemotherapeutic agent and/or radiation therapy can be administered according to therapeutic protocols well known in the art. It will be apparent to those skilled in the art that the administration of the chemotherapeutic agent and/or radiation therapy can be varied depending on the disease being treated and the known effects of the chemotherapeutic agent and/or radiation therapy on that disease.
  • the therapeutic protocols can be varied in view of the observed effects of the administered therapeutic agents (i.e., antineoplastic agent or radiation) on the patient, and in view of the observed responses of the disease to the administered therapeutic agents.
  • the compounds of the invention need not be administered in the same pharmaceutical composition as a chemotherapeutic agent, and may, because of different physical and chemical characteristics, be administered by a different route.
  • the compounds/compositions may be administered orally to generate and maintain good blood levels thereof, while the chemotherapeutic agent may be administered intravenously.
  • the determination of the mode of administration and the advisability of administration, where possible, in the same pharmaceutical composition, is well within the knowledge of the skilled clinician.
  • the initial administration can be made according to established protocols known in the art, and then, based upon the observed effects, the dosage, modes of administration and times of administration can be modified by the skilled clinician.
  • the particular choice of compound (and where appropriate, chemotherapeutic agent and/or radiation) will depend upon the diagnosis of the attending physicians and their judgment of the condition of the patient and the appropriate treatment protocol.
  • the compounds/compositions of the invention may be administered concurrently (e.g., simultaneously, essentially simultaneously or within the same treatment protocol) or sequentially, depending upon the nature of the proliferative disease, the condition of the patient, and the actual choice of chemotherapeutic agent and/or radiation to be administered in conjunction (i.e., within a single treatment protocol) with the compound/composition.
  • the compound/composition and the chemotherapeutic agent and/or radiation need not be administered simultaneously or essentially simultaneously, and the initial order of administration of the compound/composition, and the chemotherapeutic agent and/or radiation, may not be important.
  • the compounds/compositions of the invention may be administered first followed by the administration of the chemotherapeutic agent and/or radiation; or the chemotherapeutic agent and/or radiation may be administered first followed by the administration of the compounds/compositions of the invention.
  • This alternate administration may be repeated during a single treatment protocol. The determination of the order of administration, and the number of repetitions of administration of each therapeutic agent during a treatment protocol, is well within the knowledge of the skilled physician after evaluation of the disease being treated and the condition of the patient.
  • the chemotherapeutic agent and/or radiation may be administered first, especially if it is a cytotoxic agent, and then the treatment continued with the administration of the compounds/compositions of the invention followed, where determined advantageous, by the administration of the chemotherapeutic agent and/or radiation, and so on until the treatment protocol is complete.
  • the practicing physician can modify each protocol for the administration of a compound/composition for treatment according to the individual patient's needs, as the treatment proceeds.
  • the attending clinician in judging whether treatment is effective at the dosage administered, will consider the general well-being of the patient as well as more definite signs such as relief of disease-related symptoms, inhibition of tumor growth, actual shrinkage of the tumor, or inhibition of metastasis.
  • Size of the tumor can be measured by standard methods such as radiological studies, e.g, CAT or MRI scan, and successive measurements can be used to judge whether or not growth of the tumor has been retarded or even reversed. Relief of disease-related symptoms such as pain, and improvement in overall condition can also be used to help judge effectiveness of treatment.
  • HSP90 competitive binding assays and functional assays can be performed as known in the art substituting in the compounds of the invention. Chiosis et al. Chemistry & Biology 2001, 8, 289-299, describe some of the known ways in which this can be done.
  • competition binding assays using, e.g., geldanamycin or 17-AAG as a competitive binding inhibitor of HSP90 can be used to determine relative HSP90 affinity of the compounds of the invention by immobilizing the compound of interest or other competitive inhibitor on a gel or solid matrix, preincubating HSP90 with the other inhibitor, passing the preincubated mix over the gel or matrix, and then measuring the amount of HSP90 that retains or does not retain on the gel or matrix.
  • Downstream effects can also be evaluated based on the known effect of HSP90 inhibition on function and stability of various steroid receptors and signaling proteins including, e.g., Rafl and HER2.
  • Compounds of the present invention induce dose- dependent degradation of these molecules, which can be measured using standard techniques.
  • HSP90 Inhibition of HSP90 also results in up-regu irritation of HSP90 and related chaperone proteins that can similarly be measured. Antiproliferative activity on various cancer cell lines can also be measured, as can morphological and functional differentiation related to HSP90 inhibition.
  • Many different types of methods are known in the art for determining protein concentrations and measuring or predicting the level of proteins within cells and in fluid samples. Indirect techniques include nucleic acid hybridization and amplification using, e.g., polymerase chain reaction (PCR).
  • HER2 expression in breast cancer cells can be determined with the use of an immunohistochemical assay, such as the Dako HercepTM test (Dako Corp., Carpinteria, CA).
  • the HercepTM test is an antibody staining assay designed to detect HER2 overexpression in tumor tissue specimens. This particular assay grades HER2 expression into four levels: 0, 1, 2, and 3, with level 3 representing the highest level of HER2 expression.
  • Accurate quantitation can be enhanced by employing an Automated Cellular Imaging System (ACIS) as described, e.g., by Press, M. et al. Modern Pathology 2000, 13, 225A.
  • ACIS Automated Cellular Imaging System
  • Antibodies, polyclonal or monoclonal can be purchased from a variety of commercial suppliers, or may be manufactured using well-known methods, e.g., as described in Harlow et al. Antibodies: A Laboratory Manual, 2nd ed; Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y., 1988.
  • HER2 overexpression can also be determined at the nucleic acid level since there is a reported high correlation between overexpression of the HER2 protein and amplification of the gene that codes for it. One way to test this is by using RT-PCR.
  • the genomic and cDNA sequences for HER2 are known.
  • Specific DNA primers can be generated using standard, well-known techniques, and can then be used to amplify template already present in the cell. An example of this is described in Kurokawa, H. et al. Cancer Res. 2000, 60, 5887-5894.
  • PCR can be standardized such that quantitative differences are observed as between normal and abnormal cells, e.g., cancerous and noncancerous cells.
  • Well known methods employing, e.g., densitometry can be used to quantitate and/or compare nucleic acid levels amplified using PCR.
  • fluorescent in situ hybridization (FISH) assays and other assays can be used, e.g., Northern and/or Southern blotting.
  • this nucleic acid probe can be conjugated to a fluorescent molecule, e.g., fluorescein and or rhodamine, that preferably does not interfere with hybridization, and which fluorescence can later be measured following hybridization.
  • a fluorescent molecule e.g., fluorescein and or rhodamine
  • NucleicAcid-TAMRA-p-3' sequence NucleicAcid-TAMRA-p-3' sequence.
  • ACIS-based approaches as described above can be employed to make the assay more quantitative (de la Torre-Bueno, J., et al. Modern Pathology 2000, 13, 221 A).
  • Immuno and nucleic acid detection can also be directed against proteins other than HSP90 and HER2, which proteins are nevertheless affected in response to HSP90 inhibition.
  • the following examples are offered by way of illustration only and are not intended to be limiting of the full scope and spirit of the invention.
  • the samples were diluted to typically 0.1-1 mg/mL in MeOH or CH 3 CN and the injection volumes were typically 10 ⁇ L.
  • the column was not heated, and UV detection was effected at 254 run.
  • 'H-NMR spectra were recorded on a Bruker Avance 400 MHz spectrometer. The chemical names were generated using the Beilstein Autonom 2.1 software.
  • Variant 2 A solution of the aromatic compound (7 mmol) and n-halosuccinimide (NCS, NBS, or NIS, 1.06 equiv) in acetic acid (40 mL) was heated to 40-90 °C for 0.3-1 h. Evaporation, work-up (EtOAc) and flash chromatography afforded the desired halogenated benzene.
  • Step 1 2-Chloromethyl-4-methoxy-3,5-dimethylpyridine-l -oxide
  • the title compound was obtained by oxidation of 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine according to the general procedure 2.1.
  • Step 2 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine
  • the title compound was obtained by treating 2-chloromethyl-4-methoxy-3,5- dimeth.ylpyridine-1 -oxide with POCI 3 according to the general procedure 2.6.
  • HPLC Rt 6.757 min.
  • 1H-NMR (CDCI3) ⁇ 4.64 (s, 2H), 3.79 (s, 3H), 2.35 (s, 3H), 2.33 (s, 3H).
  • Example 3 4-Chloro-2-chloromethyl-3,5-dimethyl-pyridine
  • Step 1 2,3,5-Collidine-N-oxide 2,3,5-Collidine-N-oxide was obtained by oxidation of 2,3,5-collidine according to the general procedure 2.1 in 70% yield.
  • HPLC Rt 3.96 min.
  • 'H-NMR (CDCI3) ⁇ 8.03 (s, IH), 6.90 (s, IH), 2.47 (s, 3H), 2.31 (s, 3H), 2.24 (s, 3H).
  • Step 2 4-Bromo-2,3,5-collidine-N-oxide 2,3,5-collidine-N-oxide (1.3 g, 10 mmol) and K 2 C0 3 (2.9 g, 20 mmol) were suspended in 10 mL of CC1 4 . Bromine (1 mL, 20 mmol) was added dropwise, and the reaction mixture was heated to reflux for 2 h. Work-up (EtOAc) and flash chromatography (10% MeOH/EtOAc) afforded the title compound as a solid (1.05 g, 51% yield). HPLC Rt: 5.24 min.
  • Step 4 4-Bromo-3,5-dimethyl-pyridin-2-yl methanol
  • a suspension of acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester (0.26 g, 1.0 mmol) and K 2 C0 3 (excess) in MeOH (5 mL) was heated to 50 °C for 15 min.
  • Work-up (CHC1 3 ), evaporation, and filtration through a silica gel pad (eluent: 100% EtOAc) gave the title compound as a white solid (0.19 g, 88% yield).
  • Rf (50% Hexane/EtOAc): 0.5.
  • Step 1 2-chloromethyl-3,5-dimethyl-pyridin-4-ol
  • the title compound was obtained by heating 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine hydrochloride in toluene as described in the patent by Tarbit, et al WO 99/10326.
  • Step 2 4-bromo-2-chloromethyl-3,5-dimethyl pyridine
  • a mixture of 2-chloromethyl-3,5-dimethyl-pyridin-4-ol (8.2 g, 47.8 mmol) and POBr 3 (60g, 209 mmol) was stirred at 130 °C for 3 h.
  • the resulting viscous oil was cooled to r.t. and poured onto ice water.
  • Step l 4-bromo-2-chloromethyl-3,5-dimethyl pyridine
  • PBr 3 8.0 mL, 85.1 mmol, 5.8 equiv.
  • a catalytic amount of DMF (0.50 mL, 6.4 mmol, 0.44 equiv.) was added, whereupon the suspension rapidly turned into an orange solution.
  • the reaction was still incomplete as judged by HPLC. The temperature was raised to 110 °C and the reaction was prolonged for 30 min, at which point it was complete.
  • Step 2c HC1, MeOH Step 1.
  • Octanoic acid (4-chloro-5-phenylaminomethyl-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-amide
  • a solution of octanoic acid ⁇ 5-[(dibenzykmino)-methyl]-4-oxo-4,7-dihydro-3H- pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -amide (2.42 g, 3 mmol) and aniline (10 mL) was heated to 90 °C in a selaed tube overnight, concentrated, filtered, and washed with MeOH (2 mL x3) to give the title compound (1.1 g, 57% ).
  • Step 1 Octanoic acid (4-chloro-5-[(methyl-phenyl-amino)-methyl]-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-amide
  • the title compound was obtained by treating octanoic acid ⁇ 5-[(dibenzykmino)- methyl]-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -amide (2.42 g, 3 mmol) and N-methykniline (10 mL) as in step 1 of the previous example.
  • HPLC Rt 6.325 min.
  • Step 2 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5- [(methyl-phenyl-amino)-methyl]-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine
  • the title compound was obtained by alkylation of octanoic acid ⁇ 4-chloro-5- [(methyl-phenyl-amino)-methyl]-7H-pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -amide with 2- chloromethyl-4-methoxy-3,5-dimethyl-pyridine and deprotection with 4N HCl as in step 2 of the previous example.
  • HPLC Rt 4.844 min.
  • N- ⁇ 7-Acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4- chloro-7H-pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -acetamide A solution of crude N- ⁇ 7-acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4- oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -acetamide (26.4 g, 51 mmol), BnNEt 3 Cl (23.2 g, 102 mmol), PhNMe 2 (19.6 mL, 153 mmol) and POCl 3 (9.3 mL, 77 mmol) in CH 3 CN (100 mL) was heated to 80 °C for 1.5 h.
  • Step 8 N-[5-[2-(tert-Butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin- 2-y ⁇ ]-acetamide
  • a mixture ofN- ⁇ 5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7H- pyrrolo[2,3-d]pyrimidin-2-yl ⁇ -acetamide (344 mg, 0.70 mmol), 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine hydrochloride (175 mg, 0.77 mmol), K 2 C0 3 (516 mg, 3.7 mmol) and DMF (3.0 mL) was stirred at rt overnight.
  • Example A rHSP90 Competitive Binding Assay
  • Five microgram of purified rHSP90 protein (Stressgen, BC, Canada, #SPP-770) in phosphated buffered saline (PBS) was coated on 96 well plates by incubating overnight at 4°C. Unbound protein was removed and the coated wells were washed twice with 200 ⁇ L PBS.
  • DMSO controls considered as untreated samples
  • test compounds were then added at 100-30-10-3-1-0.3 ⁇ M dilutions (in PBS), the plates mixed for 30 seconds on the plate shaker, and then incubated for 60 min. at 37 °C.
  • biotin-GM biotinykted-geldanamycin
  • biotin-GM biotinykted-geldanamycin
  • biotin-GM biotinykted-geldanamycin
  • the wells were washed again twice with 200 ⁇ L PBS, before the addition of 20 ⁇ g/mL streptavidin- phycoerythrin (streptavidin-PE) (Molecular Probes, Eugene, OR) and incubation for 60 min. at 37°C.
  • streptavidin-PE streptavidin- phycoerythrin
  • Relative fluorescence units was measured using a SpectraMax Gemini XS Spectiofluorometer (Molecular Devices, Sunnyvale, CA) with an excitation at 485 nm and emission at 580 nm; data was acquired using SOFTmax ® PRO software (Molecular Devices Corporation, Sunnyvale, CA).
  • Example B Cell Lysate Binding Assay MCF7 breast carcinoma cell lysates were prepared by douncing in lysing buffer
  • Example C HER2 Degradation Assay MCF7 breast carcinoma cells (ATCC) were grown in Dulbecco's modified Eagle's medium (DMEM) containing 10% fetal bovine serum (FBS) and 10 mM HEPES, and plated in 24 well plates (50% confluent). Twenty-four hrs later (cells are 65-70% confluent), test compounds were added and incubated overnight for 16 h. For the less potent compounds, the amounts added were 100 ⁇ M, 30 ⁇ M, 10 ⁇ M and 1 uM, and for more potent compounds, the amounts added were 1 ⁇ M, 0.3 ⁇ M, 0.1 ⁇ M, 0.03 ⁇ M, 0.01 ⁇ M and 0.003 ⁇ M.
  • DMEM Dulbecco's modified Eagle's medium
  • FBS fetal bovine serum
  • HEPES fetal bovine serum
  • the wells were washed with 1 mL phosphate buffered saline (PBS), and 200 ⁇ L trypsin was added to each well. After trypsinization was complete, 50 ⁇ L of FBS was added to each well. Then 200 ⁇ L cells was transferred to 96 well plates. The cells were pipetted up and down to obtain a single cell suspension. The plates were centrifuged at 2,500 rpm for 1 min using a Sorvall Legend RTTM tabletop centrifuge (Kendro Laboratory Products, Asheville, NC). The cells were then washed once in PBS containing 0.2% BSA and 0.2% sodium azide (BA buffer).
  • PBS phosphate buffered saline
  • PE conjugated anti HER2/Neu antibody Becton Dickinson, #340552
  • PE conjugated anti-keyhole limpet hemacyanin [KLH] Becton Dickinson, #340761
  • control antibody was added at a dilution of 1 :20 and 1 :40 respectively (final concentration was 1 ⁇ g/mL) and the cells were pipeted up and down to form a single cell suspension, and incubated for 15 mins. The cells were washed twice with 200 ⁇ L BA buffer, and resuspended in 200 ⁇ L BA buffer, and transferred to FACSCAN tubes with an additional 250 ⁇ L BA buffer.
  • % HER2 degraded [(MFI untreated cells - MFI treated cells)/MFl untreated cell] x 100
  • IC 50 is defined as the concentration at which there was 50% degradation of the HER2/Neu protein.
  • Example D MTS Assay MTS assays measures the cytotoxicity of geldanamycin derivatives.
  • MTS (3- (4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H- tetrazolium is a tetrazolium dye that is converted to a formazan product by dehydrogenase enzymes of metabolically active cells (Corey, A. et al. "Use of an aqueous soluble tetrazolium/formazan assay for cell growth assays in culture," Cancer Commun. 1991, 3, 207-212).
  • % viable cells (Abs at 490 nm treated cells / Abs at 490 nm untreated cells) x 100
  • IC 50 was defined as the concentration of the compound which gave rise to 50% viable cell number.
  • the following solvents could also be used: THF, EtOH, or i-PrOH.
  • Method 2 The free base (50 mmol) was heated in i-PrOH (6 L) until it dissolved. The solution was allowed to cool to r.t. and a solution of HCl in i-PrOH (75 mmol) was added slowly dropwise. The hydrochloride crystallized out of solution within a few minutes, and was collected by filtration, washed (acetone) and dried. The sulfate and mesykte salts were also prepared in this manner.
  • the hydrochloride salts can also be made by adding CH 3 COCl to the alcoholic solution of the pyridine or free base derivative.
  • Method 3 To a suspension of free base (5 mmol) in MeOH (50 mL) was added a solution of methane sulfonic acid in MeOH (75 mmol) was added slowly dropwise. The mixture became clear within a few minutes, upon addition of i-PrOH (50-100 mL) the salt precipitated out and was collected by filtration, washed with i-PrOH, ether and dried. These methods can be applied to prepare all other salts.
  • Variant 2 A solution of the aromatic compound (7 mmol) and N- halosuccinimide (NCS, NBS, or NIS, 1.06 equiv) in acetic acid (40 mL) was heated to 40-90 °C for 0.3-1 h. Evaporation, work-up (EtOAc) and flash chromatography afforded the desired halogenated benzene.
  • General procedure 3.2 Preparation of benzylic alcohols Benzoic acid derivatives were reduced to the corresponding benzylic alcohols according to the procedure given by Bhaskar et al. J. Org. Chem. 1991, 56, 5964-5965. 4. Specific Examples
  • Example 59 N-9 and N-7 alkylation of purines.
  • a suspension of purine (28.4 mmoles), benzyl halide (28.7 mmoles) in dry DMF (80 mis) was treated with K2C03 (31.2 mmoles) at 70 °C for Mrs.
  • Extraction with EtOAc and chromatography EtOAc/Hexanes (1:1) yielded pure N9 and N-7 alkykted products. All HPLC was performed per the following parameters: HPLC Column: Zorbax 300 SB-C 18, 5 microns, 4.6 x 150 mm.
  • HPLC Instrument Agillent 1100
  • HPLC Reagent A 0.1 %TF A/Water
  • HPLC Reagent B 0.05% TFA/CH3CN
  • HPLC Method 5%B to 100%B in 7 minutes. The following compounds were prepared in this manner. 1.1 6-Chloro-9-(2,5-dimethoxy-benzyl)-9H- ⁇ urin-2-ykmine.
  • HPLC R.t. 5.194 min. 1.2 6-Chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2-ykmine.
  • 1.3 6-Chloro-9-(2,5-dichloro-benzyl)-9H-purin-2-ykmine.
  • Example 60 Halogenation of purines. To a solution of purine (6.6 mmoles) in acetate buffer/MeOH/THF or acetic acid or dichloromethane, bromine or N-chlorosuccinimide or N-Iodosuccinimide (8.7 mmoles) was added. While bromination can be done at room temperature, chlorination and iodination can be done at 60C to 90 C in 2 hours. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 2.1 8-Bromo-6-chloro-9-(2,5-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.150 min.
  • HPLC R.t. 6.676 min 2.10 9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purine.
  • HPLC R.t. 6.952 min 2.12 6,8-Dichloro-9-(2,6-dichloro-3,4,5-trimethoxy-benzyl)-9H-purin-2- ylamine.
  • Example 61 Displacement of 6-halogenated-purines.
  • 6-halogenated purines can be replaced by H, R, NHR, OR, SR using known procedures, e.g., as described inJ. Med. Chem. 1999, 42, 2064-2086. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 3.1 9-(3,4,5-Trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 4.123 min. 3.2 2 -Amino -9-(2 -bromo-3,4,5 -trimethoxy-benzyl)-9H-purine-6 -thiol. HPLC R.t. 4.931 min.
  • Example 62 Acylation of 2-amino-purines
  • 2-amino-purine can be acykted in acetic anhydride with catalytic amount of concentrated sulfuric acid or in acetic acid and catalytic amount of fuming nitric acid at room temperature. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 4.1 N-[6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]-acetamide. HPLC R.t. 5.744 min. 4.2 N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide. HPLC R.t. 5.603 min.
  • Example 63 N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]-N- methylacetamide or Methylation of compound 4.2.
  • compound 4.2 Example 62 above
  • iodomethane NaH was added.
  • Extraction with EtOAc and chromatography yield 5. HPLC R.t. 6.177 min.
  • Example 64 Synthesis of 6-methyl purines
  • the title compound was obtained by suspended purine (0.19 mmole) and tetrakis(tripl ⁇ enylphosphino)-palkdium (0.019 mmole) in dry THF (3mls) before treating with trimethykluminum (2M in toluene, 0.44 mmole) under nitrogen. The solution was refluxed for 3 hours before cooling down to room temperature. Diluted the reaction mixture with toluene (5 mis) before quenching the reaction with methanol (0.5 mis) followed by ammonium chloride (1 mmole). The mixture was refluxed for 2 hours and filtered, while hot, on Celite. See J. Med.
  • Example 65 9-(4-Bromo-3,5-dimethyl-pyridin-2-yl)-6-chloro-9H-purin-2-ylamine
  • the title compound was obtained by alkykting 2-amino-6-chloropurine with 4- bromo-2-bromomethyl-3,5-dimethyl-pyridine according to the general procedure 1.1.
  • Step 1 2,3,5-Collidine-N-oxide Oxidation of 2,3,5-collidine according to the general procedure 2.1 gave 2,3,5- collidine-N-oxide. Yield: 70%.
  • Step 2 4-Bromo-2,3,5-collidine-N-oxide 2,3,5-collidine-N-oxide (1.3 g, 10 mmol) and K 2 C0 3 (2.9 g, 20 mmol) were suspended in 10 mL of CC1 4 . Bromine (1 mL, 20 mmol) was added dropwise, and the reaction mixture was heated to reflux for 2 h. Work-up (EtOAc). and flash chromatography (10% MeOH/EtOAc) afforded the product as a solid (1.05 g, 51% yield). HPLC Rt: 5.239 min.
  • Step 4 4-Bromo-3,5-dimethyl-pyridin-2-yl methanol
  • acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester (0.26 g, 1.0 mmol) and K 2 C0 3 (excess) in MeOH (5 mL) was heated to 50 °C for 15 min.
  • Work-up (CHCI3), filtration through a silica gel pad (eluent: 100% EtOAc) and evaporation gave the title compound as a white solid (0.19 g, 88% yield).
  • Rf (50% Hexane/EtOAc): 0.5.
  • Step 1 2-chloromethyl-3,5-dimethyl-pyridin-4-ol
  • Step 2 4-bromo-2-chloromethyl-3,5-dimethyl pyridine
  • a neat mixture of 2-chloromethyl-3,5-dimethyl-pyridin-4-ol (8.2 g, 47.8 mmol) and POBr 3 (60g, 209 mmol) was stirred at 130 °C for 3 h.
  • the resulting viscous oil was cooled to r.t. and poured onto ice water.
  • the pH was adjusted to 10 with solid KOH.
  • Step 1 4-bromo-2-chloromethyl-3,5-dimethyl pyridine
  • PBr 3 8.0 ml, 85.1 mmol, 5.8 equiv.
  • a catalytic amount of DMF (0.50 ml, 6.4 mmol, 0.44 equiv.) was added, whereupon the suspension rapidly turned into an orange solution.
  • the reaction was still incomplete as judged by HPLC. The temperature was raised to 110 °C and the reaction was prolonged for 30 min, at which point it was complete.
  • Example 66 9-(4-bromo-3,5-dimethyl-pyridin-2-yl methy ⁇ )-6-chIoro-9H-purin-2- ylamine, phos hate salt
  • the title compound was obtained by treating 9-(4-bromo-3,5-dimethyl-pyridin-2- yl methyl)-6-chloro-9H-purin-2-ykmine with H 3 P0 4 according to the general procedure 2.7.
  • HPLC Rt 5.294 min.
  • Example 67 9-(4-bromo-3,5-dimethyl-pyridin-2-yl methy ⁇ )-6-chIoro-9H-purin-2- ylamine, hydrochloric acid salt
  • the title compound was obtained by treating 9-(4-bromo-3,5-dimethyl-pyridin-2- yl methyl)-6-chloro-9H-purin-2-ykmine with HCl according to the general procedure 2.7.
  • Example 68 9-(4-bromo-3,5-dimethyl-l-oxy-pyridin-2-yI methyl)-6-chloro-9H- purin-2-ylamine
  • the title compound was obtained by oxidation of 9-(4-bromo-3,5-dimethyl- pyridin-2-yl)-6-chloro-9H-purin-2-ykmine according to the general procedure 2.1.
  • Example 69 6-bromo-9-(4-bromo-3,5-dimethyl-pyridin-2-yl methyl) -9H-purin-2- ylamine
  • 6-brorno-9H-purin-2-ykmine 2.4 g, 11 mmol
  • 4-bromo-2- chloromethyl-3,5-dimethyl pyridine 3.5 g, 15 mmol
  • K 2 C0 3 2.07 g, 15 mmol
  • DMF 50 mL
  • Work-up and flash chromatography gave the title compound as a white solid (2.6 g, 56 %).
  • Example 70 6-bromo-9-(4-bromo-3,5-dimethyI-l-oxy-pyridin-2-yl methyl) -9H- purin-2-yIamine
  • the title compound was obtained by oxidation of 6-bromo-9-(4-bromo-3,5- dimethyl-pyridin-2-yl methyl) according to the general procedure 2.1 (52% yield).
  • 'H-NMR (CDCI3) ⁇ 8.47 (s, IH), 8.07 (s, IH), 5.56 (s, 2H), 5.06 (s, 2H), 2.81(s, 3H), 2.35 (s, 3H).
  • Example 71 2-(2-Amino-6-chloro-purin-9-ylmethyl)-3,5-dimethyl-pyridin-4-ol
  • the title compound was obtained by alkykting 6-chloro-9H-purin-2-ykmine with 2-chloromethyl-3,5-dimethylpyridin-4-ol according to the general procedure 1.1.
  • Example 72 6-Chloro-9- (4-ethoxy-3,5-dimethyl-pyridin-2-yImethyl)-9H-purin-2- ylamine
  • the title compound was obtained by O-alkytechnische-formation of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-p ridin-4-ol with ethyl iodide using the general procedure 2.6.
  • Example 75 6-Chloro-9-(4-isopropoxy-3,5-dimethyl-pyridin-2-yImethyI)-9H- purin-2-ylamine
  • the title compound was obtained by 0-alkytechnische-formation of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with isopropyl iodide using the general procedure 2.6.
  • HPLC Rt 4.571 min.
  • Example 76 6-Chloro-9-(4-cyclopropylmethoxy-3,5-dimethyI-pyridin-2-ylmethy ⁇ )- 9H-purin-2-ylamine
  • the title compound was obtained by 0-alkytechnische-formation of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with cyclopropylmethyl iodide using the general procedure 2.6.
  • HPLC Rt 4.709 min.
  • Example 79 Acetic acid 2-[2-(2-amino-6-chloro-purin-9-ylmethyl)-3,5-dimethyI- pyridin-4-yloxy] -ethyl ester
  • the title compound was obtained by 0-alkykom of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with 2-bromoethyl acetate using the general procedure 2.6.
  • Example 80 Acetic acid 3-[2-(2-amino-6-chloro-purm-9-ylmethyI)-3,5-dimethyl- pyridin-4-y!oxy]-propyI ester
  • the title compound was obtained by 0-alkytechnische-in- 9-ylmethyl)-3,5-dimethyl-pyridm-4-ol with 2-chloropropyl acetate the general procedure 2.6.
  • Example 81 6-Chloro-9-(3,5-dimethyl-4-propoxy-pyridin-2-ylmethyl)-9H-purin-2- ylamine
  • the title compound was obtained by O-alkytechnische-formation of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol according to the general procedure 2.6.
  • Example 82 6-Chloro-9-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine
  • Step 1 4-Chloro-2-chloromethyl-3,5-dimethyl pyridine
  • the title compound was obtained by treating 2-chloromethyl-3,5-dimethyl- pyridin-4-ol with POCl 3 according to the general procedure 2.4 (74% yield).
  • HPLC Rt 5.543 min.
  • Step 2 6-chloro-9-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-yl methyl) -9H-purin-2-ykmine
  • 6-chloro-9H-purin-2-ykmine 7 g, 41 mmol
  • 4-chloro-2- chloromethyl-3,5-dimethyl pyridine 8.2 g, 43 mmol
  • K 2 C0 3 10 g, 72 mmol
  • DMF 200 mL
  • Example 83 6-ChIoro-9-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-yl methyl) -9H- purin-2-ylamine
  • the title compound was obtained by oxidation of 6-chloro-9-(4-chloro-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the general procedure 2.1 (56% yield).
  • Examples 84 6-Chloro-9-(3,5-dimethyl-pyridin-2-yl methyl) -9H-purin-2-ylamine
  • Step 1 Acetic acid 3,5-dimethyl-pyridin-2-yl methyl ester
  • the title compound was prepared from 2,3,5-collidine-N-oxide (see example 1) according to the general procedure 2.2.
  • Step 2 3,5-Dimethyl-pyridin-2-yl methanol
  • the title compound was obtained by deacetykom of acetic acid 3,5-dimethyl- pyridin-2-yl methyl ester according to the general procedure 2.3.
  • HPLC Rt 2.909 min.
  • Step 3 2-Bromomethyl-3,5-dimethyl pyridine
  • the title compound was obtained from 3,5-dimethyl-pyridin-2-yl methanol according to the general procedure 2.5.
  • Example 85 6-Bromo-9-(4 ⁇ methoxy-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 6-bromo-9H-purin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine according to the general procedure 1.1.
  • PLC Rt 4.138.
  • Example 86 6-Bromo-9-(4-methoxy-3,5-din ethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, phosphate salt
  • the title compound was obtained by treating 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-yk ⁇ nine with H 3 P0 4 according to the general procedure 2.7.
  • HPLC Rt 4.138.
  • Example 87 6-Bromo-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, hydrochloride salt
  • the title compound was obtained by treating 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ylan ⁇ ine with HCl according to the general procedure 2.7.
  • HPLC Rt 4.138.
  • Example 88 6-Bromo-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-9H- purin-2-ylamine
  • the title' compound was obtained by oxidation of 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ylamine according to the general procedure 2.1.
  • 'H-NMR (CDC1 3 ) ⁇ 8.55 (s, IH), 8.06 (s, IH), 5.50 (s, 2H), 5.12 (s, 2H), 3.76 (s, 3H), 2.60 (s, 3H), 2.25 (s, 3H).
  • m z (%) 379.1 (M+l, 100%), 381.1 (M+3, 100%).
  • Method 1 The title compound was obtained by alkykting 6-chloro-9H-purin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine (or its HCl salt) according to the general procedure 1.1.
  • Method 2 The title compound could also be obtained by 0-methykom of 6-chloro-9-(4- hydroxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the procedure 2.6 (KOH, Mel, DMF, 80 °C, 5 min). HPLC Rt: 3.980 min.
  • Step 1 (4-Methoxy-3,5-dimethyl-pyridin-2-yl)-methykmine A solution of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine hydrochloride in 7N methanolic ammonia was placed in a pressure vessel and to 100 °C for 16 h.
  • Step 3 Synthesis of 6-chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-9H-purin-2-ylamine
  • the cyclization with trimethylorthoformate in presence of acid to prepare purines can be done. See similar reaction, example 48.
  • Example 90 6-chloro-9-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)-9H-purin-2- ylamine, phosphate salt
  • the title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ykmine with H 3 P0 4 according to the general procedure 2.7.
  • Example 91 6-ChIoro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, sulphate salt
  • the title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ylamine with H 2 S ⁇ according to the general procedure 2.7.
  • Example 92 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, hydrochloride salt
  • the title ' compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ykmine with HCl according to the general procedure 2.7.
  • Example 93 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine, mesylate salt
  • the title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ylamine with MeSOaH according to the general procedure 2.7.
  • Example 94 N-[6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethy ⁇ )-9H- purin-2-yl] -acetamide
  • a suspension of 6-chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H- purin-2-ykmine (80 mg, 0.25 mmol) in acetic acid anhydride (2.2 g) was treated with one drop of concentrated H 2 S0 4 and stirred at r.t. for 5 min. Work-up (EtOAc), drying (MgS0 ) and evaporation gave the title compound as a white solid.
  • Example 95 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyI)-9H- purin-2-ylamine
  • the title compound was obtained by oxidation of 6-chloro-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the general procedure 2.1.
  • 'H-NMR (CDC1 3 ) ⁇ 8.55 (s, IH), 8.06 (s, IH), 5.52 (s, 2H), 5.07(s, 2H), 3.76 (s, 3H), 2.61 (s, 3H), 2.25 (s, 3H).).
  • m z (%) 335.1(M+1, 100%), 337.1 (M+3, 34%).
  • Example 96 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-methoxy-pyridinium-2- methyl)-9H-purin-2-ylamine methyl sulfate salt
  • a suspension of 6-chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)- 9H-purin-2-ykmine (0.2 g, 0.56 mmol) in DCM (10 ml) was heated to reflux.
  • Dimethyl sulfate (1.12 mmol) was added dropwise (Tarbit WO 99/10326) and heating was continued for 3h. Filtration and washing (hot acetone) gave the title compound as a beige solid.
  • Example 97 6-Chloro-9-(6-chloro-4-methoxy-3 ,5-dimethyl-pyridin-2-ylmethy ⁇ )- 9H-purin-2-ylamine
  • Method 1 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-9H-purin-2- ylamine was treated with POCl 3 according to the general procedure 2.4. Flash chromatography gave the title compound as a white solid. HPLC Rt: 5.741 min.
  • Step 1 2-Chloromethyl-4-methoxy-3,5-dimethylpyridine-l-oxide
  • the title compound was obtained by oxidation of 2-chloromethyl-4-methoxy-3,5- dimethylpyridine according to the general procedure 2.1.
  • Step 2 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine
  • the title compound was obtained by treating 2-chloromethyl-4-methoxy-3,5- dimethylpyridine- 1-oxide with POCl 3 according to the general procedure 2.4.
  • HPLC Rt 6.757 min.
  • Step 3 6-Chloro-9-(6-chloro-4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 6-chloro-9H-purin-2-ykmine with 2-chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine according to the general procedure 1.1.
  • Example 98 6-ChIoro-9-(5-methoxy-4-methoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ylamine
  • Step 1 Acetic acid 3-acetoxy-5-hydroxymethyl-2-methyl-pyridin-4- ylmethyl ester
  • HPLC Rt 3.08 min.
  • 'H-NMR (CDCI3) ⁇ 8.41 (s, IH), 5.20 (s, 2H), 4.80 (s, 2H), 2.40 (s, 3H), 2.38 (s, 3H), 2.03 (s, 3H).
  • Step 2 Acetic acid 3-acetoxy-5-bromomethyl-2-methyl-pyridin-4- ylmethyl ester The title compound was obtained from Acetic acid 3-acetoxy-5-hydroxymethyl-
  • Step 3 6-Chloro-9-(5-acetoxy-4-acetoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with acetic acid 3-acetoxy-5-bromomethyl-2-methyl-pyridin-4-ylmethyl ester according to the general procedure 1.1.
  • Step 4 6-Chloro-9-(5-hydroxy-4-hydroxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine
  • a suspension of 6-chloro-9-(5-acetoxy-4-acetoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine and K 2 C0 3 (excess) in MeOH was heated to 50 °C for 15 min. Filtration, work-up (EtOAc) and purification by preparative TLC gave the title compound.
  • Example 99 Synthesis of 6-Chloro-9-(5-ethoxy-4-hydroxymethyl-6-methyl-pyridin- 3-ylmethyl)-9H-purin-2-ylamine
  • Example 101 6-Chloro-9-(3-methoxy-5-methoxymethyI-4-methyl-pyridin-2- ylmethy ⁇ )-9H-purin-2-ylamine
  • Step 1 3-Methoxy-5-methoxymethyl-2,4-dimethyl-pyridine
  • the title compound was obtained by treating a solution of 5-hydroxymethyl-2,4- dimethyl-pyridin-3-ol hydrochloride (1 g, 5.2 mmol) in DMF with Mel (2.28 g, 15 mmol) and NaH (0.6 g, 50 mmol) for 1 h at 0 °C.
  • HPLC Rt 2.835 min.
  • Example 102 6-Chloro-9-(5-chloro-6-methoxy-pyridin-3-ylmethyl)-9H-purin-2- ylamine Step 1: (5-Chloro-6-methoxy-pyridin-3-yl)-methanol (5,6-Dichloro-pyridin-3-yl)-methanol was dissolved in a saturated solution of NaOMe in MeOH and heated to reflux overnight.
  • Step 3 6-Chloro-9-(5-chloro-6-methoxy-pyridin-3-ylmethyl)-9H-purin- 2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with
  • Example 103 6-chloro-9-(3,4-dimethoxy-pyridin-2-yImethyI)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
  • Example 104 6-chloro-9-(3-methoxy-6-methyI-pyridm-2-ylmethyl)-9H-purin-2- ylamine
  • Step 1 (3-Methoxy-6-methyl-pyridin-2-yl)-methanol
  • the title compound was obtained by 0-methykom of 2-hydroxymethyl-6- methyl-pyridin-3-ol according to the general procedure 2.6.
  • H- NMR (CDC1 3 ) ⁇ 7.05-7.1 l(m, 2H), 4.72-4.71 (d, 2H), 4.47-4.49 (t, IH), 3.84 (s, 3H), 2.51 (s, 3H).
  • Step 2 2-Bromomethyl-3-methoxy-6-methyl-pyridine
  • the title compound was obtained from (3-Methoxy-6-methyl-pyridin-2-yl)- methanol according to the general procedure 2.5.
  • ⁇ -NMR (CDC1 3 ) ⁇ 7.06-7.12 (m, 2H), 4.61 (s, 2H), 3.89 (s, 3H), 2.49 (s, 3H).
  • Step 3 6-chloro-9-(3-methoxy-6-methyl-pyridin-2-ylmethyl)-9H-purin- 2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3- methoxy-6-methylpyridine according to the general procedure 1.1.
  • Example 105 6-Chloro-9-(5-methoxy-4,6-dimethyl-pyridin-3-ylmethyI)-9H-purin- 2-ylamine
  • Step 1 (5-Methoxy-4,6-dimethyl-pyridin-3-yl)-methanol
  • HPLC Rt 3.114 min. * H- NMR (CDCI 3 ) ⁇ 8.08 (s, IH), 4.67 (s, 2H), 3.74 (s, 3H), 2.49 (s, 3H), 2.33 (s, 3H).
  • Step 2 5-Bromomethyl-3-methoxy-2,4-dimethyl-pyridine
  • the title compound was obtained from (5-methoxy-4,6-dimethyl-pyridin-3-yl)- methanol according to the general procedure 2.5.
  • 'H-NMR (CDC1 3 ) ⁇ 8.22 (s, IH), 4.50 (s, 2H), 3.764(s, 3H), 2.54 (s, 3H), 2.37 (s, 3H).
  • Step 3 6-Chloro-9-(5-methoxy-4,6-dimethyl-pyridin-3-ylmethyl)-9H- purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-3- methoxy-2,4-methylpyridine according to the general procedure 1.1.
  • HPLC Rt 3.7387 min.
  • Example 106 9-(4-Methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2-yIamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine hydrochloride according to the general procedure 1.1.
  • Example 107 6-Chloro-9-(3,5-dimethoxy-4-methyl-benzyl)-9H-purin-2-ylami ⁇ e
  • Step 1 (3,5-Dimethoxy-4-methyl-phenyl)-methanol
  • the title compound was obtained by reducing 3,5-dimethoxy-4-methyl-benzoic acid as described by Bhaskar et al. J. Org. Chem. 1991, 56, 5964-5965.
  • HPLC Rt 5.352.
  • Step 2 5-Bromomethyl-l,3-dimethoxy-2-methyl-benzene
  • the title compound was obtained from (3,5-dimethoxy-4-methyl-pheny ⁇ )- methanol according to the general procedure 2.5.
  • Step 3 6-Chloro-9-(3,5-dimethoxy-4-methyl-benzyl)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-l,3-dimethoxy-4-methyl benzene according to the general procedure 1.1.
  • Example 108 9-(2-Bromo-3,5-dimethoxy-4-methyl-benzyl)-6-chloro-9H-purin-2- ylamine
  • the title compound was obtained by brominating 6-chloro-9-(3,5-dimethoxy-4- methyl-benzyl)-9H-purin-2-ykmine with bromine according to the general procedure 3.1.
  • Example 109 8-Bromo-9-(2-bromo-3,5-dimethoxy-4-methyl-benzyl)-6-chloro-9H- purin-2-ylamine
  • the title compound was obtained by brominating 6-chloro-9-(3,5-dimethoxy-4- methyl-benzyl)-9H-purin-2-ykmine with excess bromine according to the general procedure 3.1.
  • Example 110 2,6-Dichloro-9-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)-9H- purine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
  • Example 111 8-butyl-6-chloro-9-(3,4,5-trimethoxy-benzyI)-9H-purin-2-ylamine
  • Step 1 6-Chloro-N4-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,4,5- triamine
  • the title compound was obtained by refluxing 4,6-dichloro-pyrimidine-2,5- diamine (see Seek et al. Helv. Chim. Acta. 1986, 69, 1602-1613 and US Patent No.
  • Example 112 6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 3,4,5-trimethoxybenzyl according to the general procedure 1.1.
  • the title compound was also obtained by treating a solution of 6-chloro-N-4-(3 ,4,5-trimethoxy-benzyl)- pyrimidine-2,4,5-triamine in triethyl orthoformate with a catalytic amount of cone.
  • HCl at r.t. for 20 min.
  • HPLC Rt 4.906 min.
  • Example 113 Acetic acid 4-(2-amino-6-chIoro-purin-9-ylmethy ⁇ )-3-bromo-2,6- dimethoxy-phenyl ester
  • Step 1 Acetic acid 4-hydroxymethyl-2,6-dimethoxy-phenyl ester
  • a solution of acetic acid4-formyl-2,6-dimethoxy-phenyl ester (25 mmol) in MeOH (100 mL) was treated with NaBEU (1 equiv.) at 0 °C for 15 min. After quenching with acetone and evaporating the solvent, work-up (CH 2 C1 2 ) and evaporation gave the title compound as a white solid (85% yield).
  • Example 114 4-(2-amino-6-chloro-purin-9-ylmethyl)-3-bromo-2,6-dimethoxy- phenol
  • the title compound was obtained by deacetytechnische-like substance (see previous example) in NH 3 /MeOH at r.t. for 0.5 h or K 2 C0 3 in methanol according to the general procedure 2.3.
  • Example 115 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chIoro-9H-purin-2-ylamine
  • the title compound was obtained by 0-methykom of 4-(2-amino-6-chloro- purin-9-ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see previous example) according to the general procedure 2.6.
  • the title compound could also be obtained by bromination of 6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine (see example 48) in acetate buffer according to the general procedure 3.1.
  • HPLC Rt 5.742 min.
  • Example 116 9-(4-allyloxy-2-bromo-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with 3-bromo-propene in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.309 min.
  • Example 117 9-(2-bromo-4-chloromethoxy-3,5-dimethoxy-benzyl)-6-chIoro-9H- purin-2-ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with chloroiodomethane in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.109 min.
  • Example 118 9-[2-bromo-4-(2-chIoro-ethoxy)-3,5-dimethoxy-benzyI]-6-chloro-9H- purin-2-ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with l-bromo-2-chloro- ethane in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.285 min.
  • Example 119 9-(2-bromo-4-cycIopropylmethoxy-3,5-dimethoxy-benzyl)-6-chloro- 9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with bromomethyl- cyclopropane in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.512 min.
  • Example 120 9-(2-bromo-4-ethoxy-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Etl in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.112 min.
  • Example 121 9-(2-bromo-3,5-dimethoxy-4-propoxy-benzyl)-6-chIoro-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Prl in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.594 min.
  • Example 122 9-(2-bromo-4-butoxy-3,5-dimethoxy-benzyI)-6-chloro-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Bui in DMF in the presence of K 2 C0 3 at 70 °C for 0.25-1 h.
  • HPLC Rt 6.594 min.
  • Example 123 6-chloro-9-(3-methoxymethoxy-6-methyI-pyridm-2-ylmethyl)-9H- purin-2-yIamine
  • Step 1 (3-methoxymethoxy-6-methyl-pyridin-2-yl)-methanol
  • the title compound was obtained by 0-alkykom of 2-hydroxymethyl-6-methyl- pyridin-3-ol with chloromethyl methyl ether according to the general procedure 2.6.
  • 'H- NMR (CDC1 3 ) ⁇ 7.28-7.30 (d, IH), 6.98-7.00 (d, IH), 5.17 (s, 2H), 4.71 (s, 2H), 4.50 (s, 2H), 3.45 (s, 3H), 2.49 (s, 3H).
  • Step 2 2-Bromomethyl-3-methoxymethoxy-6-methyl-pyridine
  • the title compound was obtained from (3-methoxymethoxy-6-methyl-pyridin-2- yl)-methanol according to the general procedure 2.5.
  • 'H-NMR (CDC1 3 ) ⁇ 7.32-7.40 (d IH), 7.08-7.10 (d, 1H),5.30 (s, 2H), 4.67 (s, 2H), 3.55 (s, 3H), 2.54 (s, 3H).
  • Step 3 6-Chloro-9-(3-methox3 ⁇ nethoxy-6-methyl-pyridin-2-ylmethyl)- 9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3-methoxymethoxy-6-methyl-pyridine according to the general procedure 1.1.
  • HPLC Rt 3.884 min.
  • Example 124 3-(2-Amino-6-chloro-purin-9-ylmethyl)-3H-benzothiazole-2-thione
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 3-chloromethyl-3H-benzothiazole-2-thione according to the general procedure 1.1.
  • Example 125 6-Chloro-9-(2,5-dimethyl-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-chloromethyl-l,4-dimethyl-benzene according to the general procedure 1.1.
  • HPLC Rt 5.920 min.
  • Example 126 6-Chloro-9-isoquinolin-l-ylmethyl-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 1-bromomethyl-isoquinoline according to the general procedure 1.1.
  • Example 127 9-benzo [l,2,5]thiadiazol-5-ylmethyI-6-chloro-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-benzo[l,2,5]thiadiazole according to the general procedure 1.1.
  • Example 128 9-(l-methyl-lH-benzotriazol-5-ylmethyl)-6-chloro-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 6-bromomethyl-l -methyl- lH-benzotriazole according to the general procedure 1.1.
  • Example 129 6-ehIoro-9-(6-chloro-benzo[l,2,5]thiadiazol-5-ylmethyl)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-6-chloro-benzo[ 1 ,2,5]thiadiazole according to the general procedure 1.1.
  • HPLC Rt 5.400 min.
  • Example 130 9-benzo [l,2,5]thiadiazol-4-yImethyl-6-chloro-9H-purin-2-yIamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 4-bromomethyl-benzo[l,2,5]thiadiazole according to the general procedure 1.1.
  • HPLC Rt 5.027 min.
  • Example 131 6-chloro-9-(6-fluoro-4a,8a-dihydro-4H-benzo[l,3]dioxin-8-ylmethyl)- 9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with
  • Example 132 l-[3-(2-Amino-6-chloro-purin-9-yImethyl)-4-methoxy-phenyl]- ethanone
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-(3-chloromethyl-4-methoxy-phenyl)-ethanone according to the general procedure 1.1.
  • Example 133 6-chloro-9-(3-trifluoromethoxy-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-3-trifluoromethoxy-benzene according to the general procedure 1.1.
  • Example 134 6-chIoro-9-(2-fluoro-3-trifluoromethyl-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-fluoro-3-trifluoromethyl-benzene according to the general procedure 1.1.
  • Example 135 6-ChIoro-9-(2-fluoro-4,5-dimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 (2-Fluoro-4,5-dimethoxy-phenyl)-methanol
  • a solution of 2-fluoro-4,5-dimethoxy-benzaldehyde (6.0 mmol) in MeOH (10 mL) was treated with NaBH 4 (1.2 equiv.) at 0-23 °C for 0.5 h.
  • work-up CH 2 C1 2
  • drying MgS0 4
  • evaporation gave the title compound as a crude oily product (94% yield).
  • Example 136 6-chloro-9-(2,3-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: l-Bromomethyl-2,3-dimethoxy-benzene
  • Step 1 l-Bromomethyl-2,3-dimethoxy-benzene
  • the title compound was obtained from (2,3-dimethoxy-phenyl)-methanol according to the general procedure 2.5.
  • Step 2 6-Chloro-9-(2,3-dimethoxy-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,3-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 5.200.
  • Example 137 6-chloro-9-(3,4-dimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 4-Bromomethyl-l,2-dimethoxy-benzene
  • the title compound was obtained from (3,4-dimethoxy-phenyl)-methanol according to the general procedure 2.5.
  • Step 2 6-Chloro-9-(3,4-dimethoxy-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 4-bromomethyl-l,2-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 4.753.
  • Example 138 9-(2-chloro-3,4,5-trimethoxy-benzyl)-6-methyl-9H-purin-2-ylamine
  • Example 139 6-chIoro-9-(2-chIoro-4,5-dimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 (2-Chloro-4,5-dimethoxy-phenyl)-methanol
  • the title compound was obtained by chlorination of (3,4-dimethoxy-phenyl)- methanol according to the general procedure 3.1.
  • Step 2 l-Bromomethyl-2-chloro-4,5-dimethoxy-benzene
  • the title compound was obtained from (2-chloro-4,5-dimethoxy-phenyl)- methanol according to the general procedure 2.5.
  • Step 3 6-Chloro-9-(2-chloro-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-chloro-4,5-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 5.366 min.
  • Example 140 6-chloro-9-(2-io do-4,5-dimethoxy-benzyl)-9H-purin-2-yIamine
  • Step 1 4-Bromomethyl-l,2-dimethoxy-benzene
  • the title compound was obtained from (3,4-dimethoxy-phenyl)-methanol according to the general procedure 2.5.
  • Step 2 l-Bromomethyl-2-iodo-4,5-dimethoxy-benzene
  • the title compound was obtained by iodination of 4-bromomethyl-l,2- dimethoxy-benzene according to the general procedure 3.1.
  • Step 3 6-Chloro-9-(2-iodo-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-iodo-4,5-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 5.470 min.
  • Example 141 6-Bromo-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 2-Chloro-l-chloromethyl-3,4,5-trimethoxy-benzene
  • the title compound was obtained by chlorination of 5-chloromethyl-l,2,3- trimethoxy-benzene according to the general procedure 3.1.
  • Step 2 Synthesis of 6-chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H- purin-2-ykmine
  • the title compound was obtained by alkylation of 6-bromoguanine with 2-chloro- l-chloromethyl-3,4,5-trimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 5.676 min.
  • Example 142 6-chloro-9-(6-chloro-benzo[l,3]dioxol-5-ylmethyl)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-chloro-6-chloromethyl-benzo[l,3]dioxole according to the general procedure 1.1.
  • Example 143 6-chloro-9-(2,4-dimethoxy-3-methyl-benzyl)-9H-purin-2-yIamine
  • Step 1 l-Bromomethyl-2,4-dimethoxy-3-methyl-benzene
  • Step 2 6-Chloro-9-(2,4-dimethoxy-3-methyl-benzyl)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,4-dimethoxy-3-methyl-benzene according to the general procedure 1.1.
  • Example 144 6-Chloro-9-(2-chloro-3,4-dimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 l-Bromomethyl-2-chloro-3,4-dimethoxy-benzene
  • Step 2 6-Chloro-9-(2-chloro-3 ,4-dimethoxy-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-chloro-3,4-dimethoxy-benzene according to the general procedure 1.1.
  • Example 146 6-Chloro-9-(2,6-dibromo-3,5-dimethoxy-benzyl)-9H-purin-2-ylamine
  • Step 1 2-Bromo-l-chloromethyl-3,5-dimethoxy-benzene and 2,4- dibromo-3 -chloromethyl- 1 , 5-dimethoxy-benzene
  • Bromination of l-chloromethyl-3, 5-dimethoxy-benzene according to the general procedure 3.1 gave a mixture of the two title compounds, which were separated by flash chromatography.
  • Step 2 6-Chloro-9-(2,6-dibromo-3,5-dimethoxy-benzyl)-9H-purin-2- ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2,4-dibromo-3-chloromethyl-l, 5-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 6.022 min.
  • Example 147 9-(2-Bromo-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromo- l-chloromethyl-3, 5-dimethoxy-benzene (see previous example, step 1) according to the general procedure 1.1.
  • Example 148 6-chIoro-9-(3,5-dimethoxy-benzyl)-9H-purin-2-yIamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-3,5-dimethoxy-benzene according to the general procedure 1.1.
  • HPLC Rt 5.257 min.
  • Example 149 N-[6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]-acetamide
  • a solution of 6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine in acetic acid was treated with fuming HNO 3 at 0 °C for 15 min.
  • Work-up and preparative TLC (EtOAc:hexane 1:1) gave N-[6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]- acetamide.
  • Example 150 6-chloro-9-(2,5-dimethoxy-benzyl)-9H-purin-2-yIamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-2,5-dimethoxy-benzene according to the general procedure 1.1.
  • Example 151 8-bromo-6-chloro-9-(2,5-dimethoxy-benzyI)-9H-purin-2-ylamine
  • the title compound was obtained by bromination of 6-chloro-9-(2,5-dimethoxy- benzyl)-9H-purin-2-ykmine according to the general procedure 1.2.
  • Example 152 6-chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyT4,5-dimethoxy-2-nitro-benzene according to the general procedure 1.1.
  • Example 153 8-bromo-6-chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2- ylamine
  • the title compound was obtained by brominating 6-chloro-9-(4,5-dimethoxy-2- nitro-benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 1.2.
  • Example 154 6-chloro ⁇ 9-(2,5-dichloro-benzyI)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-l,4-dichloro-benzene according to the general procedure 1.1.
  • Example 155 6-chloro-9-(2,3,5-trifluoro-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,3,5-trifluoro-benzene according to the general procedure 1.1.
  • Example 156 (2-amino-6-chloro-purin-9-yl)-(3,4,5-trimethoxy-phenyl)-methanone
  • a solution of 6-chloro-9H-purin-2-ykmine in pyridine was treated with 3,4,5- trimethoxybenzoyl chloride at r.t. for 2 h.
  • Work-up and purification by preparative TLC (EtOAc:hexane 1 : 1) gave the title compound.
  • Example 157 N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide
  • a suspension of 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine (example 51) in acetic anhydride was treated with a catalytic amount of cone. H S0 at r.t. for 3 h. Work-up and purification by preparative TLC (EtOAc.hexane 9:1) gave the title compound. HPLC Rt: 5.603 min.
  • Example 158 N-[9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]-N- methyl-acetamide
  • a mixture of N-[9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide and NaH in DMF was stirred at r.t. for 15 mi ⁇ , before adding Mel. Stirring was prolonged for 2 h at 50 °C. Work-up and purification by preparative TLC (EtOAc:hexane 1:1) gave the title compound. HPLC Rt: 6.422 min.
  • Example 159 6-chloro-9-(3,5-dichloro-benzyl)-9H-purin-2-yIamine
  • Step 1 l-Bromomethyl-3,5-dichloro-benzene
  • Step 2 6-chloro-9-(3,5-dichloro-benzyl)-9H-purin-2-ykmine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-3,5-dichloro-benzene.
  • HPLC Rt 6.074 min.
  • Example 1 0 6-chIoro-9-(3,4-dichIoro-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with
  • Example 161 8-bromo-6-chloro-9-(3,4-dichloro-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by bromination of 6-chloro-9-(3,4-dichloro- benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 1.2.
  • Example 162 6-chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine Chlorination of 6-chloro-9-(3 ,4, 5-trimethoxy-benzyl)-9H-purin-2-ykmine according to the general procedure 3.1 gave a mixture of the title compound and of 6- chloro-9-(2,6-dichloro-3 ,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. The two compounds were isolated by preparative TLC. HPLC Rt: 5.626 min.
  • Example 164 2-amino-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-6-ol
  • the title compound was obtained by heating a solution of 6-chloro-9-(2-chloro- 3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine (see example 98) in IN HCl for 4 h. Solvent was evaporated and the residue was washed with EtOAc to give the title compound. HPLC Rt: 4.603 min.
  • Example 165 6-bromo-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 6-bromoguanine with 3- chloromethyl-3,4,5-trimethoxy benzene according to the general procedure 1.1. HPLC Rt: 4.947 min.
  • Example 166 6-bromo-9-(2-bromo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by bromination of 6-bromo-9-(3,4,5- trimethoxy-benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 3.1.
  • Example 167 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-ethylsulfanyl-9H-purin-2- ylamine
  • Example 168 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purin-2-ylamine A solution of 9-(2-bromo-3 ,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-ykmine
  • Example 169 9-(2-bromo-3,4,5-trimethoxy-benzy ⁇ )-9H-purine-2,6-diamine
  • a solution of 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine (see example 51) in MeOH was treated with NH 3 (7N in MeOH) in a pressure vessel at 90 °C for 16 h.
  • Work-up and purification by preparative TLC (EtOAc:hexane 3:1) gave the title compound.
  • Example 170 6-chloro-9-(2-iodo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine
  • the title compound was obtained by iodination of 6-chloro-9-(3,4,5-trimethoxy- benzyl)-9H-purin-2-ykmine (see example 48) according to the general procedure 3.1.
  • Example 171 9-(2-bromo-3,5-dimethoxy-4-methoxymethoxy-benzyl)-6-chloro-9H- purin-2-ylamine
  • the title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) chloromethyl methyl ether according to the general procedure 2.6 (NaOH, THF, r.t.) HPLC Rt: 5.817 min. 'H-
  • Example 172 9-benzothiazol-2-ylmethyI-6-chloro-9H-purin-2-ylamine
  • the title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-benzothiazole according to the general procedure 1.1.
  • HPLC Rt 5.055 min.

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Abstract

Novel heterocyclic compounds are described and demonstrated to have utility as Heat Shock Protein 90 (HSP90) inhibiting agent. Method of synthesis and use of such compounds are also described.

Description

NOVEL HETEROCYCLIC COMPOUNDS AS HSP90-INHTBITORS
FIELD OF THE INVENTION
The invention relates in general to heterocyclics and related compounds and their broad-spectrum utility, e.g., in inhibiting heat shock protein 90 (HSP90)to thereby treat or prevent HSP90-mediated diseases.
BACKGROUND
HSP90& are ubiquitous chaperone proteins that are involved in folding, activation and assembly of a wide range of proteins, including key proteins involved in signal transduction, cell cycle control and transcriptional regulation. Researchers have reported that HSP90 chaperone proteins are associated with important signaling proteins, such as steroid hormone receptors and protein kinases, including, e.g., Raf-1, EGFR, v-Src family kinases, Cdk4, and ErbB-2 ( Buchner J. TIBS 1999, 24, 136-141; Stepanova, L. et al. Genes Dev. 1996, 10, 1491-502; Dai, K. et al. J. Biol Chem. 1996, 271, 22030-4). Studies further indicate that certain co-chaperones, e.g., HSP70, p60 Hop/Stil, Hip, Bagl, HSP40 Hdj2/Hsj 1, immunophilins, p23, and p50, may assist HSP90 in its function (see, e.g., Caplan, A. Trends in Cell Biol. 1999, 9, 262-68). Ansamycin antibiotics, e.g., herbimycin A (HA), geldanamycin (GM), and 17- allylaminogeldanamycin (17-AAG) are thought to exert their anticancerous effects, by tight binding of the N-terminus pocket of HSP90, thereby destabilizing substrates that normally interact with HSP90 (Stebbins, C. et al. Cell 1997, 89, 239-250). This pocket is highly conserved and has weak homology to the ATP-binding site of DNA gyrase (Stebbms, C. et al., supra; Grenert, J.P. et al. J. Biol. Chem. 1997, 272, 23843-50). Further, ATP and ADP have both been shown to bind this pocket with low affinity and to have weak ATPase activity (Proromou, C. et al. Cell 1997, 90, 65-75; Panaretou, B. et al. EMBO J. 1998, 17, 4829-36). In vitro and in vivo studies have demonstrated that occupancy of this N-terminal pocket by ansamycins and other HSP90 inhibitors alters HSP90 function and inhibits protein folding. At high concentrations, ansamycins and other HSP90 inhibitors have been shown to prevent binding of protein substrates to HSP90 (Scheibel, T.H. et al. Proc. Natl Acad. Sci. USA 1999, 96, 1297-302; Schulte, T. W. et al. J. Biol. Chem. 1995, 270, 24585-8; Whitesell, L., et al. Proc. Natl Acad. Sci. USA 1994, 91, 8324-8328). Ansamycins have also been demonstrated to inhibit the ATP-dependent release of chaperone-associated protein substrates (Sclmeider, C.L. et al. Proc. Natl. Acad. Sc . USA 1996, 93, 14536-41; Sepp-Lorenzino et al. J. Biol. Chem. 1995, 270, 16580-16587). In either event, the substrates are degraded by a ubiquitin- dependent process in the proteasome (Schneider, C. L., supra; Sepp-Lorenzino, L., et al. J. Biol Chem. 1995, 270, 16580-16587; Whitesell, L. et al. Proc. Natl Acad. Sci. USA 1994, 91, 8324-8328). HSP90 substrate destabilization occurs in tumor and non-transformed cells alike and has been shown to be especially effective on a subset of signaling regulators, e.g., Raf (Schulte, T. W. et al. Biochem. Biophys. Res. Commun. 1997, 239, 655-9; Schulte, T. W., et al. J. Biol. Chem. 1995, 270, 24585-8), nuclear steroid receptors (Segnitz, B.; U. GehringJ. Biol. Chem. 1997, 272, 18694-18701; Smith, D. F. et al. Mol. Cell. Biol 1995, 15, 6804-12), v-Src (Whitesell, L., et al. Proc. Natl. Acad. Sci. USA 1994, 91, 8324-8328) and certain transmembrane tyrosine kinases (Sepp-Lorenzino, L. et al. J. Biol.Chem. 1995, 270, 16580-16587) such as EGF receptor (EGFR) and HER^/Neu (Hartmann, F., et al. Int. J. Cancer 1997, 70, 221-9; Miller, P. et al. Cancer Res. 1994, 54, 2724-2730; Mimnaugh, E. G., et al. J. Biol Chem. 1996, 271, 22796-801; Schnur, R. et al. J. Med. Chem. 1995, 38, 3806-3812), CDK4, and mutant p53. Erlichman et al. Proc. AACR 2001, 42, abstract 4474. The ansamycin-induced loss of these proteins leads to the selective disruption of certain regulatory pathways and results in growth arrest at specific phases of the cell cycle (Muise-Heimericks, R. C. et al. J. Biol. Chem. 1998, 273, 29864-72), and apoptosis, and/or differentiation of cells so treated
(Vasilevskaya, A. et al. Cancer Res., 1999, 59, 3935-40). Ansamycins thus hold great promise for the treatment and/or prevention of many types of cancers and proliferative disorders, and also hold promise as traditional antibiotics. However, their relative insolubility makes them difficult to formulate and administer, and they are not easily synthesized and currently must, at least in part, be generated through fermentation. Further, the dose limiting toxicity of ansamyins is hepatic. In addition to anti-cancer and antitumorgenic activity, HSP90 inhibitors have also been implicated in a wide variety of other utilities, including use as anti-inflammation agents, anti-infectious disease agents, agents for treating autoimmunity, agents for treating stroke, ischemia, multiple sclerosis, cardiac disorders, central nervous system related disorders and agents useful in promoting nerve regeneration (See, e.g., Rosen et al. WO 02/09696 (PCT/US01/23640); Degranco etal. WO 99/51223 (PCT US99/07242); Gold, U.S. Patent 6,210,974 BI; DeFranco et al., US Patent 6,174,875. Overlapping somewhat with the above, there are reports in the literature that fibrogenetic disorders including but not limited to scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis, and pulmonary fibrosis also may be treatable with HSP90 inhibitors. Strehlow, WO 02/02123 (PCT/US01/20578). Still further HSP90 modulation, modulators and uses thereof are reported in Application Nos. PCT US03/04283, PCT US02/35938, PCT/US02/16287, PCT US02/06518, PCT/US98/09805, PCT/US00/09512, PCT/US01/09512, PCT US01/23640, PCT/US01/46303, PCT/US01/46304, PCT/US02/06518, PCT/US02/29715, PCT/US02/35069, PCT/US02/35938, PCT/US02/39993, 60/293,246, 60/371,668, 60/335,391, 60/128,593, 60/337,919, 60/340,762, 60/359,484 and 60/331,893. Recently, purine derivatives showing HSP90 inhibitory activity have been reported, e.g., in PCT/US02/35069 and PCT US02/36075. Purine moieties are well accepted bioisosteres for a variety of ATP-dependent molecular targets, see, JP 10025294; US Patent 4,748, 177; US Patent 4,772,606; US Patent 6,369,092; WO 00/06573; WO 02/055521; WO 02/055082; WO 02/055083; European Patent 0178178; Eur. J. Med. Chem. 1994, 29(1), 3-9; andJ. He*. Chem. 1990, 27(5), 1409. However, compounds having the desired potency, selectivity and pharmaceutical properties required for effective HSP90 inhibition in vivo have not been reported. Therefore, a need remains for additional novel and potent HSP90 inhibitors that meet the demanding biological and pharmaceutical criteria required to proceed towards human clinical trials. SUMMARY OF THE INVENTION
The present invention is directed towards heterocyclic compounds, particularly heterocyclic compounds and related analogs that show broad utility, e.g., by inhibiting HSP90 and treating and preventing diseases that are HSP90-dependent. In one aspect, the invention comprises the heterocyclic compounds and related analogs as specified below in Formulae A, I, IA-E, II, HA-D, III, IIIA-B, and TV an IVA and heterocyclic compounds that are produced by a process of the invention. Also included in the scope of the present invention are stereoisomeric forms, including the individual enantiomers and diastereomers, racemic mixtures, and diastereomeric mixtures, as well as polymorphs, solvates, esters, tautomers, pharmaceutically acceptable salts and prodrugs of these compounds. Stereoisomers of the compounds of the present invention may be isolated by standard resolution techniques such as, for example, fractional crystallization and chiral column chromatography. In one aspect, the invention provides compounds of Formula A, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, which show utility for inhibiting HSP90 and/or treating and preventing diseases that are HSP90-dependent.
Figure imgf000006_0001
Formula A
Various genuses and subgenuses of compounds of Formula A that are within the scope of the invention are illustrated in FIGURE 1. Particularly, the invention provides compounds of Formula 1-IV.
Figure imgf000007_0001
II III rv
In another aspect, the invention provides compounds, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, which show utility for inhibiting HSP90 and/or treating and preventing diseases that are HSP90-dependent, that are prepared by the process comprising: reacting a compound of Formula Y and a compound of Formula Z, wherein: Y is represented by any of the following formulae:
Figure imgf000007_0002
Z is L'-R4-R5.
In another aspect, the present invention is directed to pharmaceutical compositions comprising the compounds of the invention, in particular, the compounds of Formulae A, I, II, III and IV and related analogs, and compounds formed by the process of the invention, and their polymorphs, solvates, esters, tautomers, diastereomer, enantiomers, pharmaceutically acceptable salts and prodrugs thereof, and one or more pharmaceutical excipients, for use in treatment or prevention of diseases that are HSP90- dependent. In another aspect, the invention features a method of treating an individual having an HSP90-mediated disorder by administering to the individual a pharmaceutical composition that comprises a pharmaceutically effective amount of a compound of Formulae A, I, II, III or IV, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, enantiomers pharmaceutically acceptable salt or prodrug thereof. In one embodiment, the invention provides a method for treating an individual having a disorder selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorders, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant diseases. In yet another embodiment, the invention provides a method for treating an individual having a fibrogenetic disorder, such as, for example, scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis. In another embodiment, the invention provides a combination therapy comprising the administration of a pharmaceutically effective amount of a compound of Formulae A, I, II, III or IV and related analogs, or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt and prodrug thereof, according to any of the preceding aspects or embodiments, and at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents. The anti-neoplastic agent may be selected from the group of alkylating agents, anti- metabolites, epidophyllotoxins antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors. Any of the above described aspects and embodiments of the invention can be combined where practical. The individual compounds, methods and compositions prescribed do not preclude the utilization of other, unspecified steps and agents, and those of ordinary skill in the art will appreciate that additional steps and compounds may also be combined usefully within the spirit of various aspects and embodiments of the invention. Advantages of the invention depend on the specific aspect and embodiment and may include one or more of: ease of synthesis and/or formulation, solubility, and IC50 relative to previously existing compounds in the same or different classes of HSP90 inhibitors. BRIEF DESCRIPTION OF THE FIGURES
FIGURE 1 shows various illustrative genuses and subgenuses of Formula A.
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
I. DEFINITIONS A "pharmaceutically acceptable derivative or prodrug" means any pharmaceutically acceptable salt, ester, salt of an ester or other derivative of a compound of this invention, which, upon administration to a recipient, is capable of providing, either directly or indirectly, a compound of this invention or a pharmaceutically active metabolite or residue thereof. Particularly favored derivatives or prodrugs are those that increase the bioavailability of the compounds of this invention when such compounds are administered to a patient (e.g., by allowing orally administered compound to be more readily absorbed into blood) or which enhance delivery of the parent compound to a biological compartment (e.g., the brain or lymphatic system). A "pharmaceutically acceptable salt" may be prepared for any compound of the invention having a functionality capable of forming a salt, for example, an acid or base functionality. Pharmaceutically acceptable salts may be derived from organic or inorganic acids and bases. Compounds of the invention that contain one or more basic functional groups, e.g., amino or alkylamino, are capable of forming pharmaceutically acceptable salts with pharmaceutically acceptable organic and inorganic acids. These salts can be prepared in situ during the final isolation and purification of the compounds of the invention, or by separately reacting a purified compound of the invention in its free base form with a suitable organic or inorganic acid, and isolating the salt thus formed. Examples of suitable acid salts include acetate, adipate, alginate, aspartate, benzoate, benzenesulfonate, bisulfate, butyrate, citrate, camphorate, camphorsulfonate, cyclopentanepropionate, digluconate, dodecylsulfate, ethanesulfonate, formate, fumarate, glucoheptanoate, glycerophosphate, glycolate, hemisulfate, heptanoate, hexanoate, hydrochloride, hydrobromide, hydroiodide, 2-hydroxyethanesulfonate, lactate, maleate, malonate, methanesulfonate, 2-napthalenesulfonate, nicotinate, nitrate, oxalate, palmoate, pectinate, persulfate, 3-phenylpropionate, phosphate, picrate, pivalate, propionate, salicylate, succinate, sulfate, tartrate, thiocyanate, tosylate and undecampate. Other acids, such as oxalic, while not in themselves pharmaceutically acceptable, may be employed in the preparation of salts useful as intermediates in obtaining the compounds of the invention and their pharmaceutically acceptable acid addition salts. See, e.g., Berge et al. "Pharmaceutical Salts", J. Pharm. Sci. 1977, 66:1-19. Compounds of the present invention that contain one or more acidic functional groups are capable of forming pharmaceutically acceptable salts with pharmaceutically acceptable bases. The term "pharmaceutically acceptable salts" in these instances refers to the relatively non-toxic, inorganic and organic base addition salts of compounds of the present invention. These salts can likewise be prepared in situ during the final isolation and purification of the compounds, or by separately reacting the purified compound in its free acid form with a suitable base, such as the hydroxide, carbonate or bicarbonate of a pharmaceutically acceptable metal cation, with ammonia, or with a pharmaceutically acceptable organic primary, secondary or tertiary amine. Representative alkali or alkaline earth salts include the lithium, sodium, potassium, calcium, magnesium, and aluminum salts and the like. Illustrative examples of some of the bases that can be used include sodium hydroxide, potassium hydroxide, choline hydroxide, sodium carbonate, N (C alkyl)4, and the like. Representative organic amines useful for the formation of base addition salts include ethylamine, diethylamine, ethylenediamine, ethanolamine, diethanolamine, piperazine and the like. This invention also envisions the quatemization of any basic nitrogen-containing groups of the compounds disclosed herein. Water or oil-soluble or dispersible products may be obtained by such quatemization. See, for example, Berge et al., supra. Pharmaceutically acceptable prodrugs of the compounds of this invention include, but are not limited to, esters, carbonates, thiocarbonates, N-acyl derivatives, N- acyloxyalkyl derivatives, quaternary derivatives of tertiary amines, N-Mannich bases, Schiff bases, aminoacid conjugates, phosphate esters, metal salts and sulfonate esters. Suitable positions for derivatization of the compounds of the invention to create "prodrugs" include but are not limited, 2-amino substitution. Those of ordinary skill in the art have the knowledge and means to accomplish this without undue experimentation. Various forms of prodrugs are well known in the art. For examples of such prodrug derivatives, see, e.g., a) Design of Prodrugs, Bundgaard, A. Ed., Elseview, 1985 and Method in Enzymology, Widder, K. et al., Ed.; Academic, 1985, vol. 42, p. 309-396; b) Bundgaard, H. "Design and Application of Prodrugs" in A Textbook of Drug Design and Development, Krosgaard-Larsen and H. Bundgaard, Ed., 1991, Chapter 5, p. 113-191; and c) Bundgaard, H., Advanced Drug Delivery Review, 1992, 8, 1-38. Each of which is incorporated herein by reference. The term "prodrugs" as employed herein includes, but is not limited to, the following groups and combinations of these groups:
Amine prodrugs:
Figure imgf000012_0001
Hydroxy prodrugs: Acyloxyalkyl esters; Alkoxycarbonyloxyalkyl esters; Alkyl esters; Aryl esters; and Disulfide containing esters. The term "alkyl," alone or in combination, refers to an optionally substituted straight-chain, or optionally substituted branched-chain saturated hydrocarbon radical having from one to about thirty carbons, more preferably one to twelve carbons. Examples of alkyl radicals include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, tert-amyl, pentyl, hexyl, heptyl, octyl and the like. The term "cycloalkyl" embraces cyclic alkyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkyl radicals wherein each cyclic moiety has from three to about eight carbon atoms. Examples of cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl and the like. A "lower alkyl" is a shorter alkyl, e.g., one containing from one to about six carbon atoms. The term "alkenyl," alone or in combination, refers to an optionally substituted straight-chain, or optionally substituted branched-chain hydrocarbon radical having one or more carbon-carbon double-bonds and having from two to about thirty carbon atoms, more preferably two to about eighteen carbons. Examples of alkenyl radicals include ethenyl, propenyl, butenyl, 1,3-butadienyl and the like. The term "cylcoalkenyl" refers to cyclic alkenyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkenyl radicals wherein each cyclic moiety has from three to about eight carbon atoms. A "lower alkenyl" refers to an alkenyl having from two to about six carbons. The term "alkynyl," alone or in combination, refers to an optionally substituted straight-chain or optionally substituted branched-chain hydrocarbon radical having one or more carbon-carbon triple-bonds and having from two to about thirty carbon atoms, more preferably from two to about tweove carbon atoms, from two to about six carbon atoms as well as those having from two to about four carbon atoms. Examples of alkynyl radicals include ethynyl, 2-propynyl, 2-butynyl, 1,3-butadiynyl and the like. The term "cycloalkynyl" refers to cyclic alkynyl radicals which include monocyclic, bicyclic, tricyclic, and higher multicyclic alkynyl radicals wherein each cyclic moiety has from three to about eight carbon atoms. A "lower alkynyl" refers to an alkynyl having from two to about six carbons. The terms "heteroalkyl, heteroalkenyl and heteroalkynyl" include optionally substituted alkyl, alkenyl and alkynyl structures, as described above, and which have one or more skeletal chain atoms selected from an atom other than carbon, e.g., oxygen, nitrogen, sulfur, phosphorous or combinations thereof. The term "carbon chain" embraces any alkyl, alkenyl, alkynyl, or heteroalkyl, heteroalkenyl, or heteroalkynyl group, which are linear, cyclic, or any combination thereof. If the chain is part of a linker and that linker comprises one or more rings as part of the core backbone, for purposes of calculating chain length, the "chain" only includes those carbon atoms that compose the bottom or top of a given ring and not both, and where the top and bottom of the ring(s) are not equivalent in length, the shorter distance shall be used in determining the chain length. If the chain contains heteroatoms as part of the backbone, those atoms are not calculated as part of the carbon chain length. The term "membered ring" can embrace any cyclic structure, including aromatic, heteroaromatic, alicyclic, heterocyclic and polycyclic fused ring systems as described below. The term "membered" is meant to denote the number of skeletal atoms that constitute the ring. Thus, for example, pyridine, pyran, and pyrimidine are six- membered rings and pyrrole, tetrahydrofuran, and thiophene are five-membered rings. The term "aryl," alone or in combination, refers to an optionally substituted aromatic hydrocarbon radical of six to about twenty ring atoms, and includes mono- aromatic rings and fused aromatic ring. A fused aromatic ring radical contains from two to four fused rings where the ring of attachment is an aromatic ring, and the other individual rings within the fused ring may be aromatic, heteroaromatic, alicyclic or heterocyclic. Further, the term aryl includes mono-aromatic ring and fused aromatic rings containing from six to about twelve carbon atoms, as well as those containing from six to about ten carbon atoms. Examples of aryl groups include, without limitation, phenyl, naphthyl, anthryl, chrysenyl, and benzopyrenyl ring systems. The term "lower aryl" refers to an aryl having six to about ten skeletal ring carbons, e.g., phenyl and naphthyl ring systems. The term "heteroaryl" refers to optionally substituted aromatic radicals containing from about five to about twenty skeletal ring atoms and where one or more of the ring atoms is a heteroatom such as, for example, oxygen, nitrogen, sulfur, selenium and phosphorus. The term heteroaryl includes optionally substituted mono-heteroaryl radicals and fused heteroaryl radicals having at least one heteroatom (e.g., quinoline, benzothiazole). A fused heteroaryl radical may contain from two to four fused rings and where the ring of attachment is a heteroaromatic ring, the other individual rings within the fused ring system may be aromatic, heteroaromatic, alicyclic or heterocyclic. The term heteroaryl also includes mono-heteroaryls or fused heteroaryls having from five to about twelve skeletal ring atoms, as well as those having from five to about ten skeletal ring atoms. Examples of heteroaryls include, without limitation, furanyl, benzofuranyl, chromenyl, pyridyl, pyrrolyl, indolyl, quinolinyl, pyridyl-N-oxide, pyrimidyl, pyrazinyl, imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, benzothiozole, benzimidazole, benzoxazoles, benzothiadiazole, benzoxadiazole, benzotriazole, quinolines, isoquinolines, indoles, purinyl, indolizinyl, thienyl and the like and their oxides. The term "lower heteroaryl" refers to a heteroaryl having five to about ten skeletal ring atoms, e.g., pyridyl, thienyl, pyrimidyl, pyrazinyl, pyrrolyl, or furanyl. The term "alicyclic" alone or in combination, refers to an optionally substituted saturated or unsaturated nonaromatic hydrocarbon ring system containing from three to about twenty ring atoms. The term alicyclic includes mono-alicyclic and fused alicyclic radicals. A fused alicyclic may contain from two to four fused rings where the ring of attachment is an alicyclic ring, and the other individual rings within the fused-alicyclic radical may be aromatic, heteroaromatic, alicyclic and heterocyclic. The term alicyclic also includes mono-alicyclic and fused alicyclic radicals containing from three to about twelve carbon atoms, as well as those containing from three to about ten carbon atoms. Examples of alicyclics include, without limitation, cyclopropyl, cyclopropenyl, cyclobutyl, cyclopentyl, cyclodecyl, cyclododecyl, cyclopentadienyl, indanyl, and cyclooctatetraenyl ring systems. The term "lower alicyclic" refers to an alicyclic having three to about ten skeletal ring carbons, e.g., cyclopropyl, cyclopropenyl, cyclobutyl, cyclopentyl, decalinyl, and cyclohexyl. The term "heterocyclic" refers to optionally substituted saturated or unsaturated nonaromatic ring radicals containing from five to about twenty ring atoms where one or more of the ring atoms are heteroatoms such as, for example, oxygen, nitrogen, sulfur, and phosphorus. The term alicyclic includes mono-heterocyclic and fused heterocyclic ring radicals. A fused heterocyclic radical may contain from two to four fused rings where the attaching ring is a heterocyclic, and the other individual rings within the fused heterocyclic radical may be aromatic, heteroaromatic, alicyclic or heterocyclic. The term heterocyclic also includes mono-heterocrclic and fused alicyclic radicals having from five to about twelve skeletal ring atoms, as well as those having from five to about ten skeletal ring atoms. Example of heterocyclics include without limitation, tetrahydrofuranyl, benzodiazepinyl, tetrahydroindazoleyl, dihyroquinolinyl, and the like. The term "lower heterocyclic" refers to a heterocyclic ring system having five to about ten skeletal ring atoms, e.g., dihydropyranyl, pyrrolidinyl, indolyl, piperidinyl, piperazinyl, and the like. The term "alkylaryl," or "araalkyl," alone or in combination, refers to an aryl radical as defined above in which one H atom is replaced by an alkyl radical as defined above, such as, for example, tolyl, xylyl and the like. The term "arylalkyl," alone or in combination, refers to an alkyl radical as defined above in which one H atom is replaced by an aryl radical as defined above, such as, for example, benzyl, 2-phenylethyl and the like. The term "heteroarylalkyl" refers to an alkyl radical as defined above in which one H atom is replaced by a heteroaryl radical as defined above, each of which may be optionally substituted. The term "alkoxy," alone or in combination, refers to an alkyl ether radical, alkyl- O-, wherein the term alkyl is defined as above. Examples of alkoxy radicals include methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, iso-butoxy, sec-butoxy, tert-butoxy and the like. The term "aryloxy," alone or in combination, refers to an aryl ether radical wherein the term aryl is defined as above. Examples of aryloxy radicals include phenoxy, benzyloxy and the like. The term "alkylthio," alone or in combination, refers to an alkyl thio radical, alkyl-S-, wherein the term alkyl is as defined above. The term "arylthio," alone or in combination, refers to an aryl thio radical, aryl-S- , wherein the term aryl is as defined above. The term "heteroarylthio" refers to the group heteroaryl-S-, wherein the term heteroaryl is as defined above. The term "acyl" refers to a radical -C(0)R where R includes alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocylic, arylalkyl or heteroarylalkyl wherein the alkyl, alkenyl, alkynyl, aryl, heteroryl, alicylic, heterocylic, arylalkyl or heteroaryl alkyl groups may be optionally substituted. The term "acyloxy" refers to the ester group -OC(0)R, where R is H, alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl, or heteroarylalkyl wherein the alkyl, alkenyl, alkynyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl or heteroarylalkyl may be optionally substituted. The term "carboxy esters" refers to -C(0)OR where R is alkyl, aryl or arylalkyl, wherein the alkyl, aryl and arylalkyl groups may be optionally substituted. The term "carboxamido" refers to
0 II R-C-N— I R' where each of R and R' are independently selected from the group consisting of
H, alkyl, aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl and heteroarylalkyl, wherein the alkyl, aryl, heteroaryl, alicyclic, heterocyclic, or arylalkyl groups may be optionally substituted. The term "oxo" refers to =0. The term "halogen" includes F, CI, Br and I. The terms "haloalkyl, haloalkenyl, haloalkynyl and haloalkoxy" include alkyl, alkenyl, alkynyl and alkoxy structures, as described above, that are substituted with one or more fluorines, chlorines, bromines or iodines, or with combinations thereof. The terms "perhaloalkyl, perhaloalkyloxy and perhaloacyl" refer to alkyl, alkyloxy and acyl radicals as described above, that all the H atoms are substituted with fluorines, chlorines, bromines or iodines, or combinations thereof. The terms "cycloalkyl, arylalkyl, aryl, heteroaryl, alicyclic, heterocyclic, alkyl, alkynyl, alkenyl, haloalkyl, and heteroalkyl" include optionally substituted cycloalkyl, arylalkyl, aryl, heteroaryl, alicyclic, heterocyclic, alkyl, alkynyl, alkenyl, haloalkyl and heteroalkyl groups. The terms "alkylamino", refers to the group -NHR where R is independently selected from alkyl. The terms "dialkylamino", refers to the group -NRR' where R and R' are alkyls. The term "sulfide" refers to a sulfur atom covalently linked to two atoms; the formal oxidation state of said sulfur is (II). The term "thioether" may be used interchangebly with the term "sulfide." The term "sulfoxide" refers to a sulfur atom covalently linked to three atoms, at least one of which is an oxygen atom; the formal oxidation state of said sulfur atom is
(IV). The term "sulfone" refers to a sulfur atom covalently linked to four atoms, at least two of which are oxygen atoms; the formal oxidation state of said sulfur atom is (VI). The terms "optional" or "optionally" mean that the subsequently described event or circumstance may but need not occur, and that the description includes instances where the event or circumstance occurs and instances in which it does not. For example, "aryl optionally mono- or di-substituted with an alkyl" means that the alkyl may but need not be present, or either one alkyl or two may be present, and the description includes situations where the aryl is substituted with one or two alkyls and situations where the aryl is not substituted with an alkyl. "Optionally substituted" groups may be substituted or unsubstituted. The substituents of an "optionally substituted" group may include, without limitation, one or more substituents independently selected from the following groups or designated subsets thereof: lower alkyl, lower alkenyl, lower alkynyl, lower aryl, heteroaryl, alicyclic, heterocyclic, arylalkyl, heteroarylalkyl, lower alkoxy, lower aryloxy, amino, alkylamino, dialkylamino, diarylalkylammo, alkylthio, arylthio, heteroarylthio, oxo, oxa, carbonyl (-C(O)), carboxyesters (-C(O)OR), carboxamido (-C(0)NH2 ), carboxy, acyloxy, -H, halo, -CN, -N02, -N3, -SH, -OH, -C(0)CH3, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, esters, amides, phosphonates, phosphonic acid, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, thioalkyls. An optionally substituted group may be unsubstituted (e.g., -CH2CH3), fully substituted (e.g., -CF2CF3), monosubstituted (e.g., -CH2CH2F) or substituted at a level anywhere in- between fully substituted and monosubstututed (e.g., -CH2CF3). The term "pyridine- 1-oxy" also means "pyridine-N-oxy." Some of the compounds of the present invention may contain one or more chiral centers and therefore may exist in enantiomeric and diastereomeric forms. The scope of the present invention is intended to cover all isomers per se, as well as mixtures of cis and trans isomers, mixtures of diastereomers and racemic mixtures of enantiomers (optical isomers) as well. Further, it is possible using well known techniques to separate the various forms, and some embodiments of the invention may feature purified or enriched species of a given enantiomer or diasteriomer. A "pharmacological composition" refers to a mixture of one or more of the compounds described herein, or pharmaceutically acceptable salts thereof, with other chemical components, such as pharmaceutically acceptable carriers and/or excipients. The purpose of a pharmacological composition is to facilitate administration of a compound to an organism. The phrase "pharmaceutically acceptable carrier" as used herein means a pharmaceutically-acceptable material, composition or vehicle, such as a liquid or solid filler, diluent, excipient, solvent or encapsulating material, involved in carrying or transporting the subject agent from one organ, or portion of the body, to another organ, or portion of the body. Each carrier must be "acceptable" in the sense of being compatible with the other ingredients of the formulation and not injurious to the patient. Some examples of materials which can serve as pharmaceutically-acceptable carriers include: (1) sugars, such as lactose, glucose and sucrose; (2) starches, such as com starch and potato starch; (3) cellulose, and its derivatives, such as sodium carboxymethyl cellulose, ethyl cellulose and cellulose acetate; (4) powdered tragacanth; (5) malt;
(6) gelatin; (7) talc; (8) excipients, such as cocoa butter and suppository waxes; (9) oils, such as peanut oil, cottonseed oil, safflower oil, sesame oil, olive oil, com oil and soybean oil; (10) glycols, such as propylene glycol; (11) polyols, such as glycerin, sorbitol, mannitol and polyethylene glycol; (12) esters, such as ethyl oleate and ethyl laurate; (13) agar; (14) buffering agents, such as magnesium hydroxide and aluminum hydroxide; (15) alginic acid; (16) pyrogen-free water; (17) isotonic saline; (18) Ringer's solution; (19) ethyl alcohol; (20) phosphate buffer solutions; and (21) other non-toxic compatible substances employed in pharmaceutical formulations. A physiologically acceptable carrier should not cause significant irritation to an organism and does not abrogate the biological activity and properties of the administered compound. An "excipient" refers to an inert substance added to a pharmacological composition to further facilitate administration of a compound. Examples of excipients include but are not limited to calcium carbonate, calcium phosphate, various sugars and types of starch, cellulose derivatives, gelatin, vegetable oils and polyethylene glycols. A "pharmaceutically effective amount" means an amount which is capable of providing a therapeutic and/or prophylactic effect. The specific dose of compound administered according to this invention to obtain therapeutic and/or prophylactic effect will, of course, be determined by the particular circumstances surrounding the case, including, for example, the specific compound administered, the route of administration, the condition being treated, and the individual being treated. A typical daily dose (administered in single or divided doses) will contain a dosage level of from about 0.01 mg/kg to about 50- 100 mg/kg of body weight of an active compound of the invention. Preferred daily doses generally will be from about 0.05 mg/kg to about 20 mg/kg and ideally from about 0.1 mg/kg to about 10 mg/kg. Factors such as clearance rate, half-life and maximum tolerated dose (MTD) have yet to be determined but one of ordinary skill in the art can determine these using standard procedures. In some method embodiments, the preferred therapeutic effect is the inhibition, to some extent, of the growth of cells characteristic of a proliferative disorder, e.g., breast cancer. A therapeutic effect will also normally, but need not, relieve to some extent one or more of the symptoms other than cell growth or size of cell mass. A therapeutic effect may include, for example, one or more of 1) a reduction in the number of cells; 2) a reduction in cell size; 3) inhibition (i.e., slowing to some extent, preferably stopping) of cell infiltration into peripheral organs, e.g., in the instance of cancer metastasis; 3) inhibition (i.e., slowing to some extent, preferably stopping) of tumor metastasis; 4) inhibition, to some extent, of cell growth; and/or 5) relieving to some extent one or more of the symptoms associated with the disorder. As used herein, the term IC50 refers to an amount, concentration or dosage of a particular test compound that achieves a 50% inhibition of a maximal response in an assay that measures such response. In some method embodiments of the invention, the "IC50" value of a compound of the invention can be greater for normal cells than for cells exhibiting a proliferative disorder, e.g., breast cancer cells. The value depends on the assay used. By a "standard" is meant a positive or negative control. A negative control in the context of HER2 expression levels is, e.g. , a sample possessing an amount of HER2 protein that correlates with a normal cell. A negative control may also include a sample that contains no HER2 protein. By contrast, a positive control does contain HER2 protein, preferably of an amount that correlates with overexpression as found in proliferative disorders, e.g., breast cancers. The controls may be from cell or tissue samples, or else contain purified ligand (or absent ligand), immobilized or otherwise. In some embodiments, one or more of the controls may be in the form of a diagnostic "dipstick." By "selectively targeting" is meant affecting one type of cell to a greater extent than another, e.g., in the case of cells with high as opposed to relatively low or normal HER2 levels.
II. COMPOUNDS OF THE INVENTION Compounds of the invention and their polymorphs, solvates, esters, tautomers, diastereomers, enantiomers, pharmaceutically acceptable salts or prodrugs show utility for inhibiting HSP90 and treating and preventing diseases that are HSP90-dependent. One embodiment of the compounds of the invention is of Formula A:
Figure imgf000021_0001
or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: X1 and X2 are the same or different and each is nitrogen or -CR6; X3 is nitrogen or -CR3 wherein R3 is hydrogen, OH, a keto tautomer, -OR8, -CN, halogen, lower alkyl, or -C(0)R9; X4 is nitrogen or a group CR6 when X3 is nitrogen, and X4 is -CR6R7 when X3 is ■
CR3 R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n- wherein n = 0-3, -C(O), -C(S), -S02-, or -S02N-; and R5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, each of which is optionally bi-or tricyclic, and optionally substituted with H, halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, araalkyl, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C02R9, -N02, or - NR8R10; with the provisos that: the compound is not one found or described in one or more of JP 10025294; US
Patent 4,748,177; US Patent 4,748,177; US Patent 6,369,092; WO 00/06573; WO 02/055521; WO 02/055082; WO 02/055083; Eur. J. Med. Chem., 1994, 29(1), 3-9; and J. He*. Chem. 1990, 27(5), 1409; -R4R5 is not a ribose or derivative thereof, or a sugar or derivative thereof; -R4R5 is not a phosphonate or phosphonic acid, or a group substituted with a phosphonate or phosphonic acid; and when R4 is (CΗ2)n where n= 0 or 1, then R4 and R5 are not connected with 'O', e.g., -CH2-O-CH2- or -CH2-CH2 -0-CH2-.
In one embodiment of the compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of Formula A, Xi and X2 are the same or different and each is nitrogen or -CR6; R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R3 is hydrogen, -OH or keto tautomer, -OR8, halogen, -CN, lower alkyl, or-C(0)R9; R4 is - (CH2)n- wherein n = 0-3, -C(O), -C(S), -S02-, or -S02N-; and R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, each of which is optionally bi- or tricyclic, and optionally substituted with H, halogen, lower alkyl, -SR8, -OR8,
-CN, -C02R9, -N02 or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl. In one embodiment, the compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of Formula A, R1 is selected from halogen, hydroxyl, lower alkoxy, lower thioalkyl and Cμ alkyl; and R2 is -NH2; R3 is hydrogen. In another embodiment, R4 is -(CH2)n-, where n = 0-3. In another embodiment, R1 is selected from halogen, hydroxyl, lower alkoxy, lower thioalkyl or CM alkyl; optionally, R2 is NH2. In another embodiment, R4 is -CH2-. In another embodiment, R4 is -(CH2)n-, wherein n = 0-3, R1 is selected from halogen, hydroxyl, lower alkoxy, lower thioalkyl, and C1-4 alkyl, and R2 is optionally NH2. In another embodiment, R1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R2 is optionally NH2, R4 is -(CH2)-, and R5 is phenyl, benzyl, or pyridyl, all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8 (or cyclic ethers such as methylenedioxy), -CN, -C02R9, -N02, or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl. In another embodiment R1 is halogen, R2 is -NH2, R4 is -CH2-, R6 is H or halogen, and R5 is phenyl optionally substituted with H, halogen, C1- alkyl, C1- alkoxy, C alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2 or -C02Rn. In another embodiment, R1 is halogen, R2 is -NH2, R4 is -CH2-, R6 is H, and R5 is 2-halo-3, 5-dimethoxyphenyl optionally substituted with H, halogen, C alkyl, C alkoxy, CM alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2, or -C02Rn at the para (4-) position. In another embodiment, R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2- chloro-3, 4,5-trimethoxyphenyl. In another embodiment, R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2- bromo-3, 4,5-trimethoxyphenyl. In other embodiments, R5 is selected from 2-iodo- 3, 4,5-trimethoxyphenyl, 2-fluoro-3,4,5-trimethoxyphenyl, or 2-bromo-3,4,5- trimethoxyphenyl. Any of the foregoing embodiments can be combined where feasible and appropriate.
In one aspect, the invention provides compounds of Formula I:
Figure imgf000024_0001
or tautomer, pharmaceutically acceptable salt, or prodmg thereof, wherein: X1 and X2 are the same or different and each is nitrogen or -CR6; Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NRsRio; R3 is hydrogen, OH or a keto tautomer, -OR8, halogen, -CN, lower alkyl or -C(0)R9; R4 is -(CH^- where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NRsRio, -N3, or -C(0)Rc.; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, -CO2R9, -N02, or -NRsRio; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R.; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or -ORπ; Rio is hydrogen or lower alkyl; and Ri 1 is lower alkyl or lower aryl.
In one embodiment of the compounds of Formula I, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Rj is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2. In another embodiment of the compounds of Formula I, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, R4 is-(CH2)n-, wherein n = 0-3. In another embodiment of the compounds of Formula I, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2; R4 is-(CH2)n-, wherein n = 0-3. In another embodiment of the compounds of Formula I, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen; R2 is NH2; and R4 is ■ CH2-.
In another aspect, the invention provides compounds of Formula IA:
Figure imgf000025_0001
or tautomer, pharmaceutically acceptable salt, or prodmg thereof, wherein: Xi and X2 are the same or different and each is nitrogen or a group -CR ; R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R4 is -(CH2)„- where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, -C02R9, -N02, or -NR8R10; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8R10, -N3, -CN, -C(0)R9, or taken together with R is carbonyl (C=0); R7 is independently selected from hydrogen, lower alkyl or taken together with Rδ is -C(O); R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R10 is hydrogen or lower alkyl, and R11 is lower alkyl or lower aryl. In one embodiment of the compounds of Formula IA, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R2 is NH2. In another embodiment of the compounds of Formula IA, or a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof, R4 is-(CH2)n-5 where n = 0- 3. In another embodiment of the compounds of Formula IA, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2; R4 is-(CH2)n-, and wherein n = 0-3. In another embodiment of the compounds of Formula IA, or a tautomer, pharmaceutically acceptable salt thereof, Ri is halogen; R2 is NH2, R4 is -CH2-.
In one embodiment, the invention provides compounds of Formula IB:
Figure imgf000026_0001
IB
or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R° is selected from hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN, and -NHR8, R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8 ; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R° or R3 is -OH or -SH, the compound may exist as the corresponding (thio)keto tautomer or a mixture of keto-enol tautomers; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, - C(0)R9, -N02> -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R and R taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, - NR10R10. or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl. In one embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R° is hydrogen, halogen, -SH, -OH, or-CN; R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R3 is hydrogen, halogen, OR8, SR8, NR8R10, lower alkyl, lower alkenyl, or lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R° is hydrogen, halogen or -CN; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R° is hydrogen, halogen, -SH, -OH or -CN; R1 is halogen; R2 is -NH2, R3 is hydrogen, halogen, -OR8, -SR8, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, perhaloalkyl, lower aryl, or lower heteroaryl, wherein R8 is hydrogen, lower alkyl, lower aryl, or -C (O)R ; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having at least three substituents. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2 and R5 is a pyridyl having at least two substituents. In another embodiment of the compounds of Formula IB, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituents.
Another embodiment of the invention is compounds of Formula IC:
Figure imgf000029_0001
or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R° is hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN or -NHR8; R1 is halogen, -OR11, -SR11 or lower alkyl; R ,2 is -NH2; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-;
R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein when R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ;
R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl; R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R° and R10 when taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N. In one embodiment of the compounds of Formula IC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or lower alkyl; R4 is -CHR12-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents. In another embodiment of the compounds of Formula IC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R° is hydrogen or -NHR s, R1 is halogen, -OR1 * , -SR1 * or lower alkyl; R10 is hydrogen or lower alkyl. In another embodiment of the compounds of Formula IC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R° is hydrogen; R1 is halogen; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R10 is hydrogen.. In another embodiment of the compounds of Formula IC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein R1 is chloro or bromo, R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl) each of R5has at least two substituents. Another embodiment of the invention is compounds represented by Formula ID:
Figure imgf000031_0001
ID
or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereofwherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH ; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8 -CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of. halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein when R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R3 and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN. In one embodiment of the compounds of Formula ID, or a polymorph, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R3 is hydrogen, halogen, -OR8, -SR8, -NR8R8, lower alkyl, lower alkenyl, or lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R8 is hydrogen, lower alkyl, lower alkenyl, or lower allcynyl, lower aryl, lower heteroaryl, or - C (O)R9; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents, and R10 is hydrogen or lower alkyl. In another embodiment of the compounds of Formula ID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R4 is
-CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R10 is hydrogen. In another embodiment of the compounds of Formula ID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R3 is hydrogen; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R1 ° is hydrogen. In another embodiment of the compounds of Formula ID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents. Another embodiment of the invention is a compounds represented by Formula IE:
Figure imgf000034_0001
or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8,-CN, - C(0)R9, -C(0)OH, -NO2, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylammo, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR1QRI0_ or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R3 and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN. In one embodiment of the compounds of Formula IE, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prod g thereof, R1 is halogen; R4 is
-CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents. In another embodiment of the compounds of Formula IE, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. Illustrative species of the compounds of Formula IB are described in TABLE 1. Prodmgs which can be employed with the compound of the invention include, but are not limited to, those listed in the Definition section above. B. Compounds of Formula II In one aspect, the invention provides compounds of Formula II:
Figure imgf000037_0001
or a polymorph, solvate, ester, tautomer, diastereomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: Xi and X2 are the same or different and each is nitrogen or -CR ; Ri is halogen, -OR8, -SR8, or lower alkyl; R2 is -NRsRio; R4 is -(CH2)n- wherein = 0-3, -C(O), -C(S), -S02-, or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8Rιo, -N3, -CN, or -
C(0)R9; R5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, OR8, -CN, - C02R9, -N02, or -NR80; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or-ORn; Rio is hydrogen or lower alkyl, R11 is lower alkyl or lower aryl.
In one embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R2 is NH2. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R4 is-(CH2)n-, where n = 0-3. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or C alkyl; and R2 is NH2; R4 is-(CH2)n-, wherein n = 0-3. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt thereof, Ri is halogen; R2 is NH2, R4 is -CH2-. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R4 is -(CH2)-; R5 is phenyl, benzyl, or pyridyl, and is independently optionally substituted with H, halogen, lower alkyl, - SR8, -OR8 (or cyclic ethers such as methylenedioxy), -CN, -C02R9, -N02, or - NR8R10; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is halogen, R2 is -NH2, R4 is - CH2-, R6 is H or halogen, R5 is phenyl optionally substituted with H, halogen, CM alkyl, CM alkoxy, CM alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2or -C02Rπ.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is halogen, R2 is -NH2, R4 is - CH2-, R6 is H, wherein R5 is 2-halo-3,5dimethoxyphenyl optionally substituted with H, halogen, C1- alkyl, C alkoxy, CM alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2, or -C02Rπ at the para (4-) position.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prod g thereof, R1 is chloro, R2 is -NH2, R4 is - CH2-, R6 is H and R5 is 2-chloro-3,4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is chloro, R2 is -NH2, R4 is - CH2-, R6 is H and R5 is 2-bromo-3, 4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is chloro, R2 is -NH2, R4 is -CH2- , R6 is H and R5 is 2-iodo-3, 4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is chloro, R2 is -NH2, R4 is -CH2- , R6 is LT and R5 is 2-fluoro-3, 4,5-trimethoxyphenyl. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is bromo, R is -NH2, R is -CH2- , R6 is H, and R5 is 2-bromo-3, 4,5-trimethoxyphenyl. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is bromo, R2 is -NH2, R4 is -CH2-, R6 is H, and R5 is 2-iodo-3,4,5-trimethoxyphenyl. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, i is bromo, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-iodo-3, 4,5-trimethoxyphenyl. In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is bromo, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-fluoro-3, 4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is halo and R5 is 2-chloro-3,4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is chloro, R2 is NH2, R4 is -CH2-, R6 is halo, and R5 is 2-bromo-3, 4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is bromo, R2 is -NH2, R4 is -CH2-, R6 is halo and R5 is 2-chloro-3, 4,5-trimethoxyphenyl.
In another embodiment of the compounds of Formula II, or tautomer, pharmaceutically acceptable salt, or prodmg thereof, R1 is bromo, R2 is -NH2, R4 is -CH2-, Rό is halo and R5 is 2-bromo-3,4,5-trimethoxyphenyl.
In one embodiment, the invention provides compounds of Formula IIA:
Figure imgf000040_0001
or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein*. Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NR8Rιo; R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02- or -S02N-; Re is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8Rιo, -N3, -CN or C(0)R9; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, -C02R9, -N02, or -NR8Rιo; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or ORπ; Rio is hydrogen or lower alkyl; and Rπ is lower alkyl or lower aryl.
In one embodiment of the compounds of Formula IIA, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2. In another embodiment of the compounds of Formula IIA, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, R4 is-(CH2)n-, where n = 0-3.
In another embodiment of the compounds of Formula IIA, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower tliioalkyl, or C alkyl; and R2 is NH2; R4 is-(CH2)n-, wherein n = 0-3. In another embodiment of the compounds of Formula IIA, or a tautomer, pharmaceutically acceptable salt thereof, Ri is halogen; R2 is NH2, R4 is -CH2-. In one embodiment, the invention provides compounds of Formula IIB:
Figure imgf000041_0001
vπ ΠB wherein: Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is - NR8RI0; t is -(CH2)n-, where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8Rιo, -N3, -CN or -C(0)R9; R5 is alkyl, aryl, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, -N02, or-NRsRio; R is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or -ORπ; Rio is hydrogen or lower alkyl, Rii is lower alkyl or lower aryl. In one embodiment of the compounds of Formula IIB, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is -NH2. In another embodiment of the compounds of Formula IIB, or tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof, R4 is-(CH2)n-, where n = 0- 3. In another embodiment of the compounds of Formula IIB, or a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof, R1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2; R4 is-(CH2)n-, wherein n = 0-
3. In another embodiment of the compounds of Formula IIB, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen; R2 is -NH2; and R4 is
-CH2-. In one embodiment, the invention provides compounds of Formula IIC:
Figure imgf000042_0001
or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen or lower alkyl; R2 is -NR8R10; R4 is -CHR12-; R3 is hydrogen, halogen, or -CN; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, axyloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate and phosphonic acid; Rs is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10 or -OR1 '; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; provided that when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3,5 di-halo; when R5 is alicyclic, the ring system does not contain any tetra-substituted sp ring carbons; when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine. In another embodiment, the invention provides compounds of Formula IID, which are compounds of Formula IIC where 4 is -CH2-,
Figure imgf000043_0001
or a polymorph, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is halogen or lower alkyl; R2 is -NR8R10; R3 is hydrogen, halogen, or -CN; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -NO2, -NR8R10, phosphonate and phosphonic acid; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11; R is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; provided that when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3,5 di-halo; when R is alicyclic, the ring system does not contain any tetra-substituted sp ring carbons; when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine. In one embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or methyl; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9. In another enϊbodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen. In another emhodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R2 is -NH2 and R3 is hydrogen. In another emhodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R2 is -NH2; R3 is hydrogen; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a pyridyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or methyl; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is halogen. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R2 is -NH2 and R3 is hydrogen. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R2 is -NH2; R3 is hydrogen; R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substitute with only two substituents, the two substituents must form part of an optionally substituted fused ring. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a pyridyl having 3 to 5 substituents. In another embodin ent of the compounds of Formula IID, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R is chloro or bromo, R2 is -NH2, and R is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. In another embodiment, the invention provides compounds, or polymorphs, solvates, esters, tautomers, pharmaceutically acceptable salts or prodmgs thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is represented by any one of the following formulae:
Figure imgf000046_0001
and Z is L*-R4-R5; wherein: L1 is halogen, NR8R10_ triflate, tosylate, or mesylate; R4 is -CHR12-, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -NO2, -NR8R10, phosphonate and phosphonic acid; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R12 is independently hydrogen or lower alkyl; R21 is halogen, lower alkyl or -OH; R22 is -NR8R10; R23 is hydrogen, halogen, or -CN; R24 is -NH2, -N02 or -NO; R25 is halogen or -OH; R26 is -C(0)NH2 or C(0)OEt; and R27 is -NH2, -OH or halogen; provided that: when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3, 5 di-halo; when R is alicyclic, the ring system does not contain any tetra-substituted sp ring carbons; or when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp ring carbons or the ring system is not a tetra-substituted pyrrolidine. In one embodiment of the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic. In another embodiment of* the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R4 is -CH2-. In another embodiment of the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, L1 is -CI, -Br or NH2; R5 is aryl or heteroaryl, wherein the aryl group is substituted with 4 to 5 substituents. In another embodiment of the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Y is a substituted purine. In another embodiment of the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, the reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO. In another embodiment of the compounds prepared by the process of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, the reaction is performed in a solvent that comprises DMF. Compounds for use in the method of treatment are inhibitors of HSP90 of the following Formula IIC, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof,
Figure imgf000048_0001
wherein: R1 is halogen, -OR11, -SR11, -NHR8, hydrogen, or lower alkyl; R2 is -NR8R10; R is hydrogen, halogen, -N3, or -CN; R4 is -(CHR12) n- where n = 0, 1 or 2, -C(O)-, -C(S)-, or -S(0)-; R5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R 1 is hydrogen or lower alkyl; provided that: -R R5 is not a ribose or derivative thereof, or a sugar or derivative thereof; -R4R5 is not a phosphonate or phosphonic acid, or substituted with phosphonate or phosphonic acid; and when R4 is -(CH2)n- where n=l or 2, then R4 and R5 are not connected through an ether linkage. In one embodiment of the compounds of Formula IIC for the method of the invention, R3 is hydrogen, halogen or -CN; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, - NR8R10, phosphonate, or phosphonic acid. In another embodiment of the compounds of Formula IIC for the method of the invention, or a polymorph, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or methyl and R2 is —NHR8, where R8 is hydrogen or -C(0)R9. In another embodiment of the compounds of Formula IIC for the method of the invention, R is -NH2 and R is hydrogen. In another embodiment of the compounds of Formula IIC for the method of the invention, R4 is -CH2-. In another embodiment of the compounds of Formula IIC for the method of the invention, wherein R1 is halogen; R2 is -NH2; R3 is hydrogen; R4 is -CH2-; R5 is aryl and heteroaryl, the aryl and heteroaryl groups are monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with two substituents, the two substituents must form part of an optionally substituted fused ring. In another embodiment of the compounds of Formula IIC for the method of the invention, R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIC for the method of the invention, R1 is chloro or bromo, R2 is -NH2, and R5 is a pyridyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIC for the method of the invention, R1 is chloro or bromo, R2 is -NH2, and R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. Compounds of the invention that are based on the following Formula IIC have illustrative species as described in TABLE II. Suitable prodmgs which can be employed by the compounds include, but are not limited to, those listed in the Definition section.
C. COMPOUNDS OF FORMULA III In another aspect, the invention provides compounds of Formula III:
Figure imgf000050_0001
or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein Xi and X2 are the same or different and each is nitrogen or CR6; Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NRsRio; R3 is hydrogen, -OH or keto tautomer, -OR8, halogen, -CN, lower alkyl or - C(0)R9; 4 is -(CH2)n- where n *= 0-3, -C(0), -C(S), -S02- or -S02N-; R5 is alkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -ORg, - CN, -C02R9, -N02 or -NR80; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or ORπ; Ri i is lower alkyl or lower aryl; and Rio is hydrogen or lower alkyl. In one embodiment of the compounds of Formula III, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2.
In another embodiment of the compounds of Formula III, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, R4 is-(CH2)n-, where n = 0-3.
In another embodiment of the compounds of Formula III, or a tautomer, pharmaceutically acceptable salt, or prodmg thereof, Ri is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2; and R4 is-(CH2)n-, wherein n = 0-3.
In another embodiment of the compounds of Formula III, or a tautomer, pharmaceutically acceptable salt thereof, Ri is halogen; R2 is NH2, and R4 is -CH2-.
One embodiment of the compounds based on Formula III are compounds of Formula IIIA:
Figure imgf000051_0001
or a polymoφh, solvate, ester, tautomer, diasteremer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, -C(0)R9, -C02H, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic; R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-2 of the ring atoms are heteroatoms selected from the group of 0, S and N, and the optional substituents on R are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)R9, -C(0)OH, -N02 and -NR8R10, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, arbamates, ureas, thioureas, and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from trie group of O, S and N; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10_ lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11 , R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; and R12 is hydrogen or lower alkyl.
In one embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R5 is aryl or heteroaryl, each of said aryl and heteroaryl groups is monocyclic or bicyclic. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R2 is -NH2; R3 is selected from hydrogen, halogen, -SR8, -OR8, -CN, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl, and R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; and R5 is aryl or heteroaryl, each of said aryl and heteroaryl groups is monocyclic or bicyclic. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or lower alkyl; R2 is -NH2; R4 is -(CH2)-; R5 is aryl, heteroaryl, alicyclic or heterocyclic, each of said aryl, heteroaryl alicyclic or heterocyclic groups is monocyclic or bicyclic. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R2 is -NH2; R3 is hydrogen, halogen, -SR8, -OR8, lower alkyl, lower aryl, lower heteroaryl, or -NR R , R and R taken together optionally form a πng of 3-7 πng atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, and R5 is a phenyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, and R5 is a pyridyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, and R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate.
Other embodiments of compounds based on Formula III are compounds of Formula IIIB:
Figure imgf000054_0001
or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, and hioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R1 " is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; and R12 is hydrogen or lower alkyl; and R15 is hydrogen, lower alkyl, lower alkenyl or lower alknyl.
In one embodiment of the compounds of Formula IIIB, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tri-cyclic; and R9 is lower alkyl, lower alkenyl, lower alkynl, lower aryl or lower heteroaryl. In another embodiment of the compounds of Formula IIIB, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R4 is -CH2-, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tri-cyclic. In another embodiment of the compounds of Formula IIIB, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R is chloro or bromo, R is -NH2, R is a phenyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIIB, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, R5 is a pyridyl having 3 to 5 substituents. In another embodiment of the compounds of Formula IIIB, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. Other embodiments of the compounds of the invention based on Formula HI are the compounds, or polymoφhs, solvates, esters, tautomers, pharmaceutically acceptable salts or prodmgs thereof, prepared by the process comprising: reacting a compound of Formula Y and a compound of Formula Z, wherein: Y is represented by any one of the following formulae:
Figure imgf000056_0001
Z is L'-R4-R5; wherein: L1 is halogen, -NR R10, triflate, tosylate, or mesylate; R4 is -(CHR12)-, -C(O), -C(S), -S(0 , or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower allcynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and ;
R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9 ;
R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR1 *, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
R12 is hydrogen or lower alkyl; R21 is halogen, -OR8, -SR8 or lower alkyl;
R22 is -NR8R10;
R23 is hydrogen, -OH or its keto tautomer, -OR8, halogen, -CN, lower alkyl, lower aryl or -C(0)R9;
R >24 is -CHO, -NH2, -N02 or -NO; R25 is halogen or -OH;
R26 is -C(0)NH2 or C(0)OEt; and R27 is -NH2, -OH or halogen. In one embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic. In another embodiment of the compounds of the invention which are prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, L1 is -CI, -Br or -NH2; R is -CH2-; and R5 is aryl or heteroaryl. In another embodiment of the compounds of the invention which are prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Y is a pyrazolopyrimidine. In another embodiment of the compounds of the invention which are prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, said reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO. In another embodiment of the compounds of the invention which are prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, the said reaction is performed in a solvent that comprises DMF. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. Illustrative species of the compounds of the invention that are based on Formula IIIA, where R2 = -NH2 are described in TABLE III. Prodmgs which can be employed by those compounds include, but are not limited to, those listed in the Definition section. D. Compounds of Formula IV In another aspect, the invention provides compounds of Formula IV:
Figure imgf000058_0001
or a polymoφh, solvate, ester, tautomer, diasteremer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: Xi and X2 are the same or different and each is nitrogen or CRβ; Ri is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8Rl0; R4 is -CH2n,- where n = 0-3, -C(O), -C(S), -S02-, or -S02N-; R5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally bi-or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, -C02R9, -N02, or -NR80; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8Rιo or -ORn; Rπ is lower alkyl or lower aryl; and Rio is hydrogen or lower alkyl. In one embodiment of the compounds of Formula IV, a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof, R1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is -NH2.
In one embodiment of the compounds of Formula IV, a tautomer, pharmaceutically acceptable salt thereof; or prodmg thereof, R is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is -NH2; R4 is -CH2-, -C(O), -C(S), - S02-. .
In one embodiment of the compounds of Formula IV, a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof, R1 is halogen or C alkyl; and R2 is NH2, Rt is -CH2-. In one embodiment of the compounds of Formula IV, a tautomer, pharmaceutically acceptable salt thereof, or prodmg thereof, R1 is halogen, hydroxyl, lower alkoxy, lower thioalkyl, or CM alkyl; and R2 is NH2, R4 is -(CH2)n-, -where n = 0- 3. In one embodiment of the compounds of Formula IV, a tautomer, pharmaceutically acceptable salt, or prodmg thereof, R is -C(O) or -CH2-; R1 is halogen, lower alkoxy or CM alkyl; and R is NH2.
In another embodiment of compounds based on Formula IV are compounds of Formula IVA:
Figure imgf000060_0001
or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, - C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; and R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -SO2-; and R12 is hydrogen or lower alkyl; provided that when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons. In one embodiment of the compounds of Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof, each of the aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic. In another embodiment of the compounds of Formula IVA, or a polymorph, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9. In another embodiment of the compounds of Formula IVA, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is lower alkyl. In another embodiment of the compounds of Formula IVA, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-. In another embodiment of the compounds of Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is halogen; R2 is -NH2, R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents. In another embodiment of the compounds of Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having at least three substituent. In another embodiment of the compounds of Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2 and R5 is a pyridyl having at least two substituent. In another embodiment of the compounds of Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R1 is chloro or bromo, R2 is -NH2, and R5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituent. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. In another embodiment, the invention provides compounds, or polymoφhs, solvates, esters, tautomers, pharmaceutically acceptable salts or prodmgs thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is a represented by any one of the following formulae:
Figure imgf000062_0001
Z is L'-R4-R5; wherein: L1 is halogen, -NR8R10,triflate, tosylate, ormesylate; R4 is -CHR12-, -C(O)-, -C(S)-, -S(0 or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1- 3 of the ring atoms are heteroatoms selected from the group of O, S and ; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 ; or -OR11, wherein R10and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; R2' is halogen, -OR8, -SR8 or lower alkyl; R22 is -NR8R10; R24 is -NH2, -N02 or -NO; R2S is halogen or -OH; R26 is -C(0)NH2 or C(0)OEt; and R27 is -NH2, -OH or halogen; provided that when R5 is alicyclic, the ring system does not contain any tetra-substituted sp ring carbons. In one embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, L1 is -CI, -Br or -NH2; R5 is aryl or heteroaryl. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, R4 is -CH2-. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Li is -CI, -Br or -NH2; R4 is -CH2-; and R5 is aryl or heteroaryl. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Y is a triazolopyrimidine. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Y is a triazole. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, Y is a pyrimidine. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, the reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO. In another embodiment of the compounds prepared by the process of the invention, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, the reaction is performed in a solvent that comprises DMF. It should be understood that any of the foregoing embodiments can be combined where feasible and appropriate. Illustrative species of the compounds of the invention that are based on Formula IVA are described in TABLE 4. Prodmgs which can be employed by these compounds include, but are not limited to, those listed in the Definition section.
TABLE I: Exemplary Compounds based on Formula IA
Figure imgf000066_0001
Figure imgf000066_0002
Figure imgf000067_0001
Figure imgf000068_0001
Figure imgf000069_0001
Figure imgf000070_0001
Figure imgf000071_0001
Figure imgf000072_0001
Figure imgf000073_0001
Figure imgf000074_0001
Figure imgf000075_0001
Figure imgf000076_0001
Figure imgf000077_0001
Figure imgf000078_0001
Figure imgf000079_0001
Figure imgf000080_0001
Figure imgf000081_0001
Figure imgf000082_0001
Figure imgf000083_0001
Figure imgf000084_0001
Figure imgf000085_0001
Figure imgf000086_0001
Figure imgf000087_0001
Figure imgf000088_0001
Figure imgf000089_0001
Figure imgf000090_0001
Figure imgf000091_0001
Figure imgf000092_0001
Figure imgf000093_0001
Figure imgf000094_0001
Figure imgf000095_0001
Figure imgf000096_0001
Figure imgf000097_0001
Figure imgf000098_0001
Figure imgf000099_0001
Figure imgf000100_0001
Figure imgf000101_0001
Figure imgf000102_0001
Figure imgf000103_0001
Figure imgf000104_0001
Compounds of interest in Table 1 are: 2, 3, 17, 18, 27, 28, 62, 63, 77, 78, 92, 93, 129, 130, 238, 239, 242, 243, 245, 246, 247, 248, 249, 250, 251, 252, 253, 267, 268, 287, 288 291 , 292, 293, 294, 295, 296, 297, 298 312, 313, 332, 333, 334, 335, 336, 337, 338, 339 351, 352, 365, 366, 384, 385, 398, 3.99 400, 401, 402, 403, 404, 405, 417, 418, 431, 432 433, 434, 435, 436, 437, 438, 450, 451 464, 465, 483, 484, 497, 498, 530, 531, 549, 550 562, 563, 574, 575, 577, 578, 589, 590 592, 593, 604, 605, 607, 608, 619, 620, 755, 756 759, 760, 761, 762, 763, 764, 765, 766 780, 781, 800, 801, 804, 805, 806, 807, 808, 809 810, 811, 825, 826, 845, 846, 863, 864 865, 866, 875, and 876 (with those selected being 17, 18, 27, 28, 62, 63, 77, 78, 242, 243, 245, 246, 247, 248, 249, 250, 251, 252, 253, 267, 268, 287, 288, 291, 292, 293, 294, 295, 296, 312, 313, 431, 432, 755, 756, 759, 760, 761, 762, 763, 764, 800, and 801.) TABLE 2. EXEMPLARY COMPOUNDS OF THE INVENTION OF FORMULA IIC
Figure imgf000105_0001
Figure imgf000105_0002
Figure imgf000106_0001
Figure imgf000107_0001
Figure imgf000108_0001
Figure imgf000109_0001
Figure imgf000110_0001
Figure imgf000111_0001
Figure imgf000112_0001
Figure imgf000113_0001
Figure imgf000114_0001
Figure imgf000115_0001
Figure imgf000116_0001
Figure imgf000117_0001
Figure imgf000118_0001
Figure imgf000119_0001
Figure imgf000120_0001
Figure imgf000121_0001
Figure imgf000122_0001
Figure imgf000123_0001
Figure imgf000124_0001
Figure imgf000125_0001
Figure imgf000126_0001
Figure imgf000127_0001
Figure imgf000128_0001
Figure imgf000129_0001
Figure imgf000130_0001
Figure imgf000131_0001
Figure imgf000132_0001
Figure imgf000133_0001
Figure imgf000134_0001
Compounds of interest in Table 2 are: 2, 3, 11, 44, 82, 83, 242, 243, 245, 248, 249, 254, 255, 260, 266, 272, 273, 278, 279, 284, 286, 287, 308, 309, 343, 348, 349, 354, 366, 367, 372, 373, 671 and 697 (with those selected being 2, 242, 243, 248, 254, 260, 266, 272, 278, 284, 286, 287, 308, 343, 348, 349, 354, 372, 373, 671 and 697.) TABLE 3 : 2 .„ EXEMPLARY COMPOUNDS OF FORMULA IIIA, R is = NH2
Figure imgf000135_0001
Figure imgf000135_0002
Figure imgf000136_0001
Figure imgf000137_0001
Figure imgf000138_0001
Figure imgf000139_0001
Figure imgf000140_0001
Figure imgf000141_0001
Figure imgf000142_0001
Figure imgf000143_0001
Figure imgf000144_0001
Figure imgf000145_0001
Figure imgf000146_0001
Figure imgf000147_0001
Figure imgf000148_0001
Figure imgf000150_0001
Figure imgf000151_0001
Figure imgf000152_0001
Figure imgf000153_0001
Figure imgf000154_0001
Figure imgf000155_0001
Figure imgf000156_0001
Figure imgf000157_0001
Figure imgf000158_0001
Figure imgf000159_0001
Figure imgf000160_0001
Figure imgf000161_0001
Figure imgf000162_0001
Figure imgf000163_0001
Figure imgf000164_0001
Figure imgf000165_0001
Figure imgf000166_0001
Figure imgf000167_0001
Figure imgf000168_0001
Figure imgf000169_0001
Figure imgf000170_0001
Figure imgf000171_0001
Figure imgf000172_0001
Compounds of interest in Table 3 are: 1, 2, 3 16, 17, 18, 27, 28, 47, 48, 62, 63, 77, 78, 92, 93, 97, 98, 129, 130, 242, 243, 245, 246, 247, 248, 249, 250, 251, 252, 253, 267, 268, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 312, 313, 332, 333, 334, 335, 336, 337, 338, 339, 351, 352, 365, 366, 367, 368, 369, 370, 384, 385, 398, 399, 400, 401, 417, 418, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 450, 451, 464, 465, 466, 466, 467, 468, 469, 470, 471, 483, 484, 497, 498, 530, 531, 550, 551, 563, 564, 575, 576, 578, 579, 590, 591, 593, 594, 605, 606, 608, 609, 620, 621, 721, 722, 725, 726, 727, 728, 729, 730, 746, 747, 766, 767, 791, 792, 81 1, 812, 823, 824, 825, 826, 839, 840, 853, 854, 867, and 868, and the more preferred compounds are 242, 243, 245, 246, 247, 248, 267, 268, 287, 288, 312, 313, 332, 333, 334, 335, 336, 337, 338, 339, 365, 369, 398, 417, 431, 432, 433, 434, 435, 436, 437, 438, 450, 451, 464, 465, 483, and 484.
TABLE 4: EXEMPLARY COMPOUNDS OF FORMULA IV
Figure imgf000173_0001
Figure imgf000173_0002
Figure imgf000174_0001
Figure imgf000175_0001
Figure imgf000176_0001
Figure imgf000177_0001
Figure imgf000178_0001
Figure imgf000179_0001
Figure imgf000180_0001
Figure imgf000181_0001
Figure imgf000182_0001
Figure imgf000183_0001
Figure imgf000184_0001
Figure imgf000185_0001
Figure imgf000186_0001
Figure imgf000187_0001
Figure imgf000188_0001
Figure imgf000189_0001
Compounds of interest in Table 4 are: compounds 2, 3, 13, 82, 83, 162, 163, 168, 169, 174, 175,180, 181,186, 187,192, 193,198,199,204,205,210,211,228,229,230,231, 232, 233, 234, 235, 236, 237, 250, 251, 262, 263, 268, 269, 274, 275, 280, 281, 286, 287, 292, 293, 298, 299, 304, 305, 310, 311, 316, 317, 328, 329, 338, 372, 373, 380 and 381 (with those selected being 162, 163, 168, 169, 174, 175, 180, 181, 186, 187, 192, 193, 198, 199, 204, 205, 228, 229, 262, 263, 268, 269, 274, 275, 280, 281, 286, 287, 292, 293, 316, 317, 328, and 329.) III. Synthesis of the Compounds of the Invention Synthesis of compounds of the present invention may be accomplished by various methods known in the art, including those described in, for example, Montgomery, J. Med. Pharm. Chem., 1962, 5, 15-24; Sircar, U.S. Patent 4,772,606, 1988; Sircar, U.S. Patent 4,748,177, 1988; Hans, U.S. Patent 5,110,818, 1992; Gillespie, PCT publication No. WO 02/055521; Matsuda, JP 10025294 A2, 1998; Hans, U.S. Patent 5,110,818, 1992 and U.S. Publication No. US 2003/0078413. The synthesis of the several embodiments of the invention is illustrated. The process is applicable to other subgenus. A. Synthesis of Compounds of Formula I and Related Analogs The compounds of Formula I and related analogs of the present invention may be synthesized by various methods known in the art. Illustratively, the strategy for the sysnthesis of pyrrolopyrimidines is outlined in Scheme 1 and consists of three parts: (1) constructing the bicyclic system, starting from either a pyridine, a pyrimidine, a pyrrole, or an acyclic precursor
(2) appending the R5-R4- group, and (3) further elaborating the ring systems. Importantly, one skilled in the art will recognize that the sequence of events is not necessarily (l)-(2)-(3), and that these events may be interchanged, provided there be no incompatibility between the reagents and the functional groups specific to the point in case.
Figure imgf000191_0001
Figure imgf000191_0002
Scheme 1
Also, the starting materials or the intermediates of Formula 1, 4, 5, and I can exist in tautomeric forms as shown in Fig. 1, and both forms are indiscriminately used in this patent.
Figure imgf000192_0001
Figure 1
1. Assembly of the pyrolof2,3-d1pyrimidine 1.1. Assembly of the pyrolo[2,3-d]pyrimidine starting from a pyrimidine The compounds of Formula 4 can be prepared from pyrimidines as outlined in Scheme 2. For instance:
STARTING FROM A PYRIMIDINE METHODS TO PREPARE THE 5-MEMBERED RING OF COMPOUND (4)
Figure imgf000193_0001
BY FORMATION BY FORMATION OF THE C-N BOND OF THE C-C BOND
Figure imgf000193_0002
10 Scheme 2 Method 1.1.1 The compounds of Formula 4 can be made by intramolecular cyclization of an aldehyde or ketone, possibly protected, as in Formula 6. (See, J. Davoll, J. Chem. Soc. I960, 131; J. A. Montgomery, J. Chem. Soc. 1967, 665; G. Cristalli, J. Med. Chem. 1988, 31, 390; T. Miwa, J. Org. Chem. 1993, 58, 1696; D.M. Williams, J. Chem. Soc, Perkin Trans 1, 1991, 1171).
Method 1.1.2 The compounds of Formula 4, wherein R3 is H, R6 is CI, and R7 is NH2 can be prepared by treating compounds of Formula 7 wherein R is a halogen or a leaving group with ammonia. Similarly, compounds of Formula I wherein R3 is H, R1 is CI, R2 is NH2 can be prepared by treating the compound of Formula 7 wherein R is a halogen or leaving group with R5-R4-NH2 in butanol at reflux in presence of a base such as K2C03, Cs2C03 i-PrNEt2. (A.B. Reitz J. Med. Chem. 1994, 37, 3561). Compounds of Formula 7 can in turn be prepared as taught by G.W. Craig J. Prakt. Chem. 2000, 342, 504 and M. Semonsky Coll. Czech. Chem. Commun. 1980, 45, 3583).
Method 1.1.3 The compounds of Formula 4 can be obtained by treatment of a -haloketone of Formula 8 wherein X is a halogen with ammonia or an synthetic equivalent thereof.
Method 1.1.4 The compounds of Formula 4 wherein R° is methyl can be obtained by a tandem
Pd-mediated intramolecular cyclization/double-bond migration of alkenes of Formula 9 (S. E. Watson, Synth. Commun. 1998, 28, 3885).
Method 1.1.5 The compounds of Formula 4 wherein R3 is H can be obtained by Pd-mediated intramolecular cyclization of alkynes of Formula 10, wherein Z in as electron- withdrawing group such as, e.g., tosyl-, or EtC002-. Method 1.1.6 The compounds of Formula 4 wherein R3 is AcO- can be obtained by intramolecular Friedel-Crafts acylation of precursors of Formula 11 (E. D. Edstrom, J. Org. Chem. 1993, 58, 403). Method 1.1.7 The compound of Formula 4, wherein R° is H, R6 is OH, and R7 is NH2, can be prepared by treating/ the compound of Formula 12 with an -haloaldehydes of the formula R3-CHX-CHO. See, D.M. Williams, J. Chem. Soc, Perkin Trans 1, 1997, 1171; C. J. Barnett, Org. Proc Res. Devop. 1999, 3, 184; A. Gangjee, J. Med. Chem. 2001, ^, 1993.
Method 1.1.8 The compounds of Formula 4, wherein R6 is OH and R7 is NH2 can be obtained by treating the compound of Formula 13 with an aldehyde of the formula R3-CHO. See,
A. Gangjee, J. Med. Chem. 2003, 46, 591; E. C. Taylor, Heterocycles 1996, 43, 323. 1.2: Assembly of the pyrolo[2,3-d]pyrimidine starting from a pyrrole The compounds of Formula 4 can also be made from pyrroles of Formula 2. There is a variety of methods by which the 6-membered ring can be formed (e.g. R. J. Bontems, J. Med. Chem, 1990, 33, 2174 and references therein). For instance:
Figure imgf000195_0001
Scheme 3
Compounds of Formula 2 wherein R13 is -CN and R14 is R-NH-CR7=N- can be cyclized and rearranged to give compounds of Formula 4 where R is R-NH-. See, E. C Taylor, J. Am. Chem. Soc. 1965, 87, 1995. Compounds of Formula 2 wherein R13 is -CN and R is -NH2 can be treated with thiourea, guanidine, or chloroformamidine to give compounds of Formula 4 in which R is -NH2 and R7 is -NH2. See, H. Kosaku, Heterocycles, 2001, 55, 2279; A. Gangjee, US Patent 5,939,420 (1999). Compounds of Formula 2 wherein R13 is -CN and R1 is -NH2 can be treated formamidine acetate to give compounds of Formula 4 wherein R6 is -NH2 and R7 is H (J. A. Montgomery, J. Chem. Soc. 1967, 665). The same transformation can be accomplished by treatment with DMF-DMA or an orthoester such as (EtO)3CH, followed by treatment with ammonia. See, E. C. Taylor, J. Am. Chem. Soc, 1965, 87, 1995. Compounds of Formula 2 wherein R13 is -CN and R14 is -NH2 can be treated with formic acid to give compounds of Formula 4 wherein R6 is -OH and R7 is H (K. A. M. El-Bayouki, J. Chem. Res. Miniprint, 1995, 1901). Compounds of Formula 2 wherein R13 is - C02NH2 and R14 is -NH2 can be treated under Vilsmeyer-Haack conditions (DMF/POCl3) to give compounds of Formula 4 wherein R6 is OH or CI and R7 is H. See, K. A. M. El-Bayouki, J. Chem. Res. Miniprint, 1995, 1901. Compounds of Formula 2 wherein R13 is -CONH2 and R14 is -NH2 can be treated with CS2 or EtOCS2K to give compounds of Formula 4 in which R6 is -OH and R7 is - SH. See, S. M. Bennett, J. Med. Chem. 1990, 33, 2162. 1.3. Assembly of the pyrolo[2,3-d]pyrimidine starting from an acyclic precursor The compounds of Formula 14 can be prepared from an acyclic precursor a outlined in Scheme 4 (T. Miwa, J. Med. Chem. 1991, 34, 555).
Figure imgf000196_0001
Scheme 4 2. Incorporation of the -R4-R5 fragment 2.1. Alkylation of compounds of Formula 4 Compounds of Formula 4 can be alkylated in the presence of a base such as K2C03, NaH, Cs2C03, DBU etc. with/without the presence of a catalyst such as Nal, KI, (Bu)3NI etc, and in a polar solvent such as DMF, THF, DMSO etc. using electrophiles such as L*-R4-R5 where L1 is a leaving group. See Scheme 5. Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesylate, triphenylphosphonium (generated under Mitsunobu conditions, e.g. PPh3/DEAD) etc. See Kasibhatla, PCT publication number WO 03/037860.
Figure imgf000197_0001
several steps Scheme 5
2.2. Preparation of electrophiles L*-R4-R5 wherein L1 is a leaving group 2.2.1. Synthesis of benzyl type electrophile
Figure imgf000197_0002
The electrophiles can be prepared from the substituted benzene derivatives using various methods reported in the literature, see Jerry March, Advanced Organic
Chemistry, 4' edition; Larock, Comprehensive Organic Transformations, 1989,VCH, New York. For example the compounds wherein L1 is Br can be prepared by reduction of the corresponding benzoic acid or benzaldehyde, followed by halogenation. These benzyl derivatives can also be prepared by benzylic oxidation or benzylic halogenation. Further modification of the benzyl ring can be done before or after the pyrolo[2,3- d]pyrimidine alkylation step. 2.2.2. Synthesis of pyridyl methyl type electrophile
Figure imgf000198_0001
Fig 3
These compounds can be prepared from many methods reported in the literature. Morisawa , J. Med. Chem. 1974, 17, 1083; Klaus, W. , J. Med. Chem. 1992, 35,
438; Abramovitch, R.A.; Smith, E. M. "Pyridine- 1 -oxide in Pyridine and its Derivatives," in The Chemistry of Heterocyclic Compounds; Weissberger, A., Taylor, E.
C, Eds.; John Wiley, New York, 1974, Pt. 2, pp 1-261; Jeromin, G. E., Chem. Ber. 1987,
120, 649. Blanz, E. J., J. Med. Chem. 1970, 13, 1124; Smith, Kline and French, EP
Application EP 0184322, 1986; Abblard, J., Bull. Soc. Chim. Fr. 1972, 2466; Fisher, B.
E., The Structure of Isomaltol. J. Org. Chem. 1964, 29, 776. De Cat, A., Bull. Soc. Chim. Belg. 1965, 74, 270; Looker, J. H., J. Org. Chem. 1979, 44, 3407. Ackerman, J. F. Ph.D.
Dissertation, University of Notre Dame, June, 1949. These methods can be applied to the synthesis of quinoline, and isoquinolines type compounds. 2.3. Incorporation of the -R4-R5 fragment by nucleophilic substitution. In some cases, the -R4-R5 group can be appended before the bicyclic pyrrolo[2,3- dlpyrimidine bicyclic ring is constructed, and this is further detailed below (paragraph 4, schemes 8 and 9). In these cases the -R4-R5 group can be appended by an aromatic nuclophilic substitution using NH2-R4-R5. The compound NH2-R4-R5 is obtained by treating L'-R4-R5 with ammonia at temperatures of 20-160 °C in a pressure vessel. The corresponding amines where L1 is -NH2 can be prepared by a variety of methods, for instance from compounds where L1 is leaving group such as chloride, bromide, tosylate, mesylate etc. using ammonia, or with sodium azide followed by hydrogenation. 3. Further Elaboration of the ring systems 3.1. Functional group interconversions of R Compounds of Formula IA, wherein R° is H can be oxidized to compounds of Formula I wherein R° is -OH with pyridinium tribromide or polymer supported pyridinium tribromide in tert-butanol/acetic acid mixture followed by zinc reduction. See, C. Liang, US Patent 6,610,688 (2000); L. Sun, Bioorg. Med. Chem Lett, 2002, 12, 2153. Compounds of Formula I, wherein R° is H can be treated under Mannich conditions (HCHO + HNRR') to give compounds Formula IA wherein R° is -CH-NRR'. See F. Seek, Synthesis, 1997, 1067. Compounds of Formula IA, wherein R° is H can be lithiated and treated with electrophiles (e.g., I2, ArCHO) to provide compounds of Formula IA wherein R° is, e.g. - I or -CH(OH)Ar. See, E. Bisagni, Tetrahedron, 1983, 39, 1111; T, Sakamoto, Tetrahedron Lett. 1994, 35, 2919; T. Sakamoto, J. Chem. Soc, Perkin Trans 1, 1996, 459. 3.2. Functional group interconversions of R1 Compounds of Formula IA, wherein R1 is OH, can be converted to halides using standard conditions POCl3, POBr3 etc. with/without a base such as Et3N, N,N- dimethylaniline, (i-Pr)2NEt etc. and with/without a catalyst such as BhEfølS Cl ~, in polar solvents such as CH3CN, CH2C12 etc. Related methods include, but are not limited to, SOCl2/DMF (M. J. Robins, Can. J. Chem. 1973, 12, 3161), PPha/CC (L. De Napoli , J. Chem. Soc. Perkin Trans 1, 1994, 923), HMPT/CC14 or HMPT/NBS (E. A. Veliz, Tetrahedron Lett, 2000, 41, 1695) or PPh3/I2 (X. Lin, Org. Letters, 2000, 2, 3497). Compounds of Formula ΪA, wherein R1 is -NH2, can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosylating agent (NaN02/H+, NOBF4, RONO) and a halogen donor (BF4 _, CuX2, SbX3 where X is halogen). Compounds of Formula IA, wherein R1 is alkyl can be prepared from compounds of Formula 4 where R1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy, J. Med. Chem. 1999, 42, 2064). Compounds of Formula IA, wherein R1 is a halide can be converted to compounds wherein R1 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g., NH3, NaOH, thiourea, R80", R8S", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, H) (e.g., B. G. Ugarkar, J. Med. Chem. 2000, 43, 2883-2893 and 2894-2905). Compounds of Formula IA, wherein R1 is halogen or another leaving group can be treated with ammonia to provide compounds of Formula IA wherein R1 is -NH2 (F. Seek, Liebigs. Ann.Chem. 1985, 315). 3.3. Functional group interconversions of R2 Compounds of Formula IA, wherein R2 is -NH2 can be temporarily protected, e.g. as an amide (Ac20, PivCl), a carbamate (tBoc)20) or amidine (DMF-DMA). Compounds of Formula IA, wherein R2 is -NH2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosykting agent (Na VH1", NOBF4, RONO) and a halogen donor (BF4-, CuX2, SbX3). Compounds of Formula IA, wherein R2 is a halide can be converted to compounds wherein R2 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g. NH3, NaOH, thiourea, R80", R8S", with or without a caklyst (e.g. Pd, Ni, Cu, Lewis acid, H1). Compounds of Formula IA, wherein R2 is -SH can be converted to halides (Br2). They can also be oxidized (e.g., H202) and treated with ammonia to give a -NH2 group (S. M. Bennett, J. Med. Chem. 1990, 33, 2162). Compounds of Formula IA, wherein R2 is a sulfide, e.g., MeS-, can be converted to a sulfone, e.g. MeS02 ~, and displaced with a nucleophile, e.g. NH3 or NH2-NH2, N3-, CN-. 3.4. Functional group interconversions of R3 Compounds of Formula IA, wherein R3 is H, can be halogenated (j. F. Gerster, J. Chem. Soc. 1969, 207) and further functionalized by Pd-catalyzed reactions ((a) Sonogashira coupling: E. C. Taylor et al, Tetrahedron, 1992, 48, 8089; (b) carboxyktion: j. W. Pawlik, J. Heterocycl Chem. 1992, 29, 1357; (c) Suzuki coupling: T. Y. I Wu, Org. Lett., 2003, 5, 3587) or by addition of nucleophiles (e.g. hydrazine, B. M. Lynch, Can. J. Chem. 1988, 66, 420). Compounds of Formula IA wherein R3 is -CHO can be sujected to a Bayer- Villiger oxidation to provide compounds of Formula IA wherein R3 is -O-CHO. The latter can be hydrolyzed to R3 is -OH. (A.S. Bourlot, E. Desarbre, J.Y. Merour Synthesis 1994, 411) Compounds of Formula IA, wherein R3 is H can be treated under Mannich condition (HCHO + HNRR') to give compounds Formula IA wherein R3 is -CH-NRR' (F. Seek, Synthesis, 1997, 1067) Compounds of Formula IA, wherein R3 is -CH2-NBn2 can be obtained by Mannich reaction and further treated with an aniline of Formula NH2-Ar to give compounds of Formula IA wherein R3 is -CH2-NH-Ar (D. C. Miller, J. Med. Chem. 2002, 45, 90). Compounds of Formula IA, wherein R3 is Br can be metalkted with BuLi, and treated with an electrophile such as Mel to give a compound of Formula IA, wherein R3 is methyl. Compounds of Formula IA, wherein R1 is -CI and R3 is -Br can undergo selective metalktion at R3 (J. S. Pudlo, J. Med. Chem. 1990, 33, 1984). Compounds of Formula IA, wherein R° is -OH and R3 is H can be be monalkykted or bis-alkykted to give compounds of Formula ID, wherein R1 is an alkyl group. The alkylation can be effected in the presence of a base such as KHMDS, LHMDS, LDA etc. with/without the presence of a catalyst such as Nal, KI, (Bu)3NI etc., and in a polar solvent such as THF, DMSO etc using electrophiles such as L'-R3 where L1 is a leaving group. Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate or mesykte.
Figure imgf000201_0001
Scheme 6 Compounds of Formula IA, wherein R° is H and R3 is H can be oxidized to compounds of Formula 16/IE, with an oxidizing reagent such as ruthenium tetroxide in a binary solvent such as acetonitrile/water. (G.W. Gribble Org. Prep. Proced. Int. 2001, 33(6), 615). Compounds of Formula LA, wherein R° is -OH and R3 is H can be oxidized to compounds of Formula IC, wherein R is an oxo group with an oxidizing reagent such as selenium dioxide or oxygen in presence of a cobalt (III) catalyst. (Se02 oxidation: Romeo Helv. Chim. Acta. 1955, 38, 463, 465. Oxygen oxidation: A. Inada Heterocycles 1982, 19, 2139). 3.5. Further elaboration of R5 R5, especially when it is aryl or heteroaryl, can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkyktion/acylation, etc or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry. The heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H202, 03, MCPBA etc. in polar solvents such as CH2C12, CHC13, CF3COOH etc. See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 7.
Figure imgf000203_0001
X = OR, SR, halogen R" = alkyl, alkenyl, alkynyl
Figure imgf000203_0002
Scheme 7 4. Permutations of the order of events As mentioned above, the events (1) assembly of the bicyclic system (2) appendage of the R5-R4- moiety, and (3) further elaboration of the ring systems do not necessarily have to be made in the sequence (l)-(2)-(3), and it may be beneficial to proceed in a different sequence. Method 4.1. Scheme 8 shows a synthesis in which the order of events is not (l)-(2)-(3), but is (2)-(l)-(3). First R5 is appended via an aromatic nucleophilic substitution, then the bicyclic system is constructed, and finally it is elaborated.
NA I1, Metho .1.1 Method .1.3 RΛNλχ " 17
Figure imgf000204_0001
18
Figure imgf000204_0002
Scheme 8
Method 4.1.1 The compound of Formula 18, wherein R is CI and R is NH2, can be prepared by treating the compound of Formula 17 with R5-R4-NH2 in butanol at reflux in presence of a base such as K2C03, Cs2C03 or iPrNEt2. (A.B. Reitz J. Med. Chem. 1994, 37, 3561).
Method 4.1.2 The compound of Formula 19, wherein R 1 is CI and R is NH2, can be prepared by refluxing the compound of Formula 18 in chloroform or dichloroethane in presence of an halogenating reagent such as bromine, N-bromosuccinimide, iodine or N- iodosuccinimide and an acid such as acetic acid or p-toluenesulfonic acid. (A.P. Phillips J. Am. Chem. Soc. 1952, 74, 3922).
Method 4.1.3 The compound of Formula 20, wherein R1 is CI and R2 is NH2, can be prepared by coupling the compound of Formula 19 with trimethylsilylacetylene under Sonogashira conditions followed by hydroboration using dichlorohexylborane and oxidation using hydrogen peroxide in presence of sodium hydroxide. (Sonogashira coupling: E. C. Taylor Tetrahedron , 1992, 48, 8089. Hydroboration/oxidation: G. Zweifel J. Am. Chem. Soc. 1976, 98, 3184). Method 4.1.4 The compound of Formula 21, wherein R1 is CI and R is NH2, can be prepared by heating the compound of Formula 20 in a polar aprotic solvent such as THF, DME or dioxane in presence of oxalyl chloride, thionyl chloride, mesyl chloride or alkyl chloroformate and a base such as iPrNEt2 or pyridine. It can also be prepared by treating the compound of Formula 20 with coupling reagents such DCC/HOBt, DCC/DMAP or EDCI/HOBt. (R.C. Larock Comprehensive Organic Transformations Second Edition, pi 870).
Method 4.2 Again, as mentioned above, the events (1) assembly of the bicyclic system (2) appendage of the R5-R4- moiety, and (3) further elaboration of the ring systems do not necessarily have to be made in the sequence (l)-(2)-(3), and it may be beneficial to proceed in a different sequence. For illustrative purposes, Scheme 9 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (2)-(l)-(3). First R5 is appended via an aromatic nucleophilic substitution, then the bicyclic system is constructed, and finally it is elaborated.
Figure imgf000205_0001
Scheme 9 Method 4.3 For illustrative purposes, Scheme 10 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (l)-(3)-(2)-(3). First the bicyclic ring is constructed, then it is elaborated, then the R4-R5 moiety is appended, and finally the bicyclic ring system is further elaborated (deprotection).
Figure imgf000206_0001
P = Ac, t-Boc, etc.
Figure imgf000206_0002
Scheme 10
Also, if R is for instance a pyridine, it can be converted to a N-oxide either before or after alkylation.
B. Synthesis of Compounds of Formula II (Imidazolopyridines and Aminopurines and Related Analogs The compounds of Formula II may be synthesized by various methods known in the art. A general strategy for the synthesis of aminopurines (Formulae IIC & IID) is outlined in Scheme 11. Other members of compounds of Formula II may also be synthesized following this route. It should be understood that other methods can also be used.
Method 3
Figure imgf000206_0004
Method 2
Figure imgf000206_0005
3 Scheme 11 The starting materials or the intermediates of the Formula 2, or/and 4 can exist in tautomeric forms as shown in Fig 4. Both forms are indiscriminately described in the specifications.
Figure imgf000207_0001
Figure imgf000207_0002
Fig 4
1. Method 1: From purines: The compounds of Formula IIC (see, Scheme 12) can be synthesized from the commercially available starting heterocycle, for example compounds of Formula 2 where R6 is -CI, -Br or -OH, R7 is -NH2 and R8 is -H are commercially available from Aldrich, AlfaAesar, etc. Accordingly, Formula 2 can be alkykted in the presence of a base such as K2C03, NaH, Cs2C03, DBU etc. with/without the presence of halide such as Nal, KI, (Bu)3NI etc, and in a polar solvent such as DMF, THF, DMSO etc using electrophiles such as L'-R4-R5 where -L1 is a leaving group. Leaving groups include but are not
Figure imgf000208_0001
Scheme 12 limited to, e.g., halogen, triflate, tosylate , mesykte etc See Kasibhatla, PCT publication number WO 03/037860. Compounds of Formula I, wherein R1 is -OH can be converted to halides using standard conditions POCl3, POBr3 etc with/without the presence of base such as Et N, N,N-diethykniline, (i-pr)2NEt etc. in polar solvents such as CH3CN, CH2C12 etc. The compounds of Formula IIC, wherein R1 is -OR11, -SR11, or -NHR8 where R11 is alkyl, R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9, where R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, where R10 is independently hydrogen or lower alkyl, can be prepared from compounds of Formula IIC wherein R1 is halogen reacting with HOR1 *, HSR1 ' or NH2R8 in presence of a base such as K2C03 or NaH and a polar solvent such as DMF or THF. Compounds of Formula IIC where R8 is -C(0)R9 can be prepared when R1 is hydroxyl by simple acylation. Compounds of Formula IIC where R1 is alkyl can be prepared from compounds of Formula II where R1 is halogen and trialkyl aluminum or dialkyl zinc. (See Holy, J. Med. Chem. 1999, 42, 2064). R5 especially when it is aryl or heteroaryl, can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkyktion/acyktion, etc. or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry. The heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H202, 03, MCPBA etc in polar solvents such as CH2C12, CHC13, CF3COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Compounds of Formula IIC where R3 is halogen, can be prepared from Formulae 1 or 2 using halogenating agents such as Br2, NBS, NCS, NIS etc. in polar solvents such as DMF, water, or suitable buffer solution. See Herdewijn, J. Med. Chem. 1995, 38, 3838. Alternatively, compounds of Formula 2 where R8 is iodo can also be made using procedures known in the literature, e.g., Burger, J. Org. Chem. 2000, 65, 7825. These can be further modified as needed; for example, where R3 is -N3, or -CN by reacting with an azide such as NaN3, LiN3 etc. or cynide such as KCN or NaCN in polar solvents such as DMF, DMSO etc. See Halbfinger, J. Med. Chem. 1999, 42, 1625; Jacobson, J. Med. Chem. 1999, 42, 5325. 2. Method 2: From Pyrimidines Compounds of Formula IIC can also be prepared from the substituted pyrimidines of Formula 5 (see, Scheme 13). Accordingly, reaction of commercially available compounds of Formula 5, where R16 is hydrogen or -N02, (see J. Chem. Soc 1962, 4186, for the preparation of R16 = -N02 compound) with NH2-R4-R5 in solvents such as EtOH, BuOH etc in presence
Figure imgf000209_0001
Scheme 13
of organic bases such as Et3N, (i-pr)2NEt etc. followed by nitrosation
Figure imgf000209_0002
-H) using nitrous acid, then reduction with sodium dithionite or Zn/HCOOH etc. of Formula 6 (R16 = -NO or -N02) to yield compounds of Formula 6 where R16 is -NH2. Condensation of Formula 6, where R is -NH2 using standard conditions such as triethylorthoformate, formic acid, cyanogenbromide etc as described in J. Chem. Soc. 1963, 4186; Sircar, U.S. Patent 4,748,177, 1988; and Dang, WO 98/39344, followed by reaction with POCl3 to give compounds of Formula II, Scheme 13. These compounds of Formula IIC can be further modified as necessary. Similarly, compounds of Formula IIC can also be synthesized from Formula 7, 2- amino-4, 6-dichloro pyrimidine (see Scheme 14). Reaction of Formula 7 withNH2-R4- R5 in solvents such as EtOH, BuOH etc. in presence of organic bases such as Et3N, (ipr)2Net, etc. followed by reaction with diazonium salt prepared from 4-chloroaniline
Figure imgf000210_0001
Scheme 14
and NaN02 in aq. HC1 to give compound Formula 8, where R16 is azo-(4- chlorobenzene). Reduction of the azo compound with zinc in acetic acid to give compounds of Formula 8, where R16 is -NH2. (See, Meier, U.S. Patent 5,204,353 (1993)). Condensation of these compounds using standard conditions such as triethylorthoformate, formic acid, cyanogenbromide etc. as described in J. Chem. Soc. 1963, 4186; Sircar, U.S. Patent 4,748,177, 1988, and Dang, WO 98/39344, followed by reaction with POCl3 to give compounds of Formula IIC, Scheme 14. These compounds of Formula IIC can be further modified as necessary. Likewise, compounds of Formula 8 where R16 is NH2 can be made from the commercially available 2,5-diamino-4,6-dihydroxy pyrimidine as described in Daluge, U.S. Patent 5,917,042 (1999), See Scheme 15.
Figure imgf000210_0002
Scheme 15 3. Method 3: From imidazoles Compounds of Formula IIC can also be prepared from the substituted imidazoles as shown in Scheme 6. Accordingly, compounds of Formula 4, wherein R14 is NH2, R13 is C(0)NH2 and R15 is H, can be alkylated in the presence of a base such as KOH, NaOH, K2C03, NaH, Cs2C03, DBU etc with/without the presence of halide such as Nal, KI, (Bu)3NI etc., and in a polar solvent such as DMF, THF, DMSO etc. using electrophiles such as L!-R4-R5 where L1 is a leaving group. Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesykte etc. to give compounds of Formula 10. The ring closure can be achieved using many methods reported in the literature, Alhede, J. Org. Chem., 1991, 2139 and references cited therein to give guanines of Formula II, wherein R1 is OH. These compounds can be converted to the
Figure imgf000211_0001
11 Scheme 16
compounds of Formula II, wherein R1 is CI using POCl3 as described earlier.
Advantageously, these steps can be reversed as shown in Scheme 16 via Formula 11 . Alternately, we can also construct these 2-aminopyrimidine rings from Formula 4, wherein R14 is -OH or halide, R13 is -C(0)OEt and R15 is -H by reacting with guanidine hydrochloride as described in Chowdhury, J. Med. Chem. 1999, 42, 4300. Preparation of electrophiles L -R4-R5 wherein L1 is a leaving group and nucleophiles
NH R4-R5.
Synthesis of benzyl type electrophile: Benzyl type electophiles (Fig. 2 supra) can be prepared as described above in Section III.A.2.2.1 using various methods reported in the literature, see Jerry March, Advanced Organic Chemistry, 4* edition; Larock, Comprehensive Organic Transformations, 1989,VCH, New York. For example the Li is -Br can be prepared by reduction followed by halogenation of the benzoic acid or aldehyde derivatives . These benzyl derivatives can also be prepared by benzylic oxidation or benzylic halogenation. Further modification of the benzyl ring can be done before or after the corresponding amines where Li is -NH2 can be prepared from the compounds where Li is leaving group such as chloride, bromide, tosylate, mesykte etc. using ammonia. Synthesis of pyridyl methyl type electrophile: Pyridyl methyl type electophiles can be prepared from many methods reported in the literature including those identified in Section III.A.2.2.2. Further modification of the pyridyl ring can be done after the purine alkylation see Scheme 16.
Figure imgf000212_0001
D. Synthesis of Compounds of Formula in fPyrazolopyrimidines and Related Analogs) The compounds the present invention may be synthesized by various methods known in the art, including those described in, for example, Gillespie, PCT publication No. WO 02/055082; Dempcy, US publication No. US 2003/0078413 Al . For the synthesis of compounds of Formulae III, IIIA and IIIB, a general strategy is outlined in Scheme 17 and consists of three parts: (1) constructing the bicyclic system, starting from either a pyridine or a pyrazole, (2) appending the -R -R group, and (3) further elaborating the ring systems. Importantly, one skilled in the art will recognize that the sequence of events is not necessarily (l)-(2)-(3), and that these events may be interchanged, provided there be no incompatibility between the reagents and the functional groups specific to the point in case. Scheme 17
Also, the skrting materials and the intermediates of the Formula 1, 2, 3, or 4 can exist in tautomeric forms as shown in Fig 5, and both forms are indiscriminately used in this patent.
Figure imgf000213_0001
Fig 5 ssembly of the pyrazolo[3,4-dl pyrimidine 1.1 Assembly of the pyrazolo[3,4-d]pyrimidine starting from a pyrimidine
Figure imgf000214_0001
Scheme 18 The compounds of Formula 3 can be prepared from pyrimidines as outlined in Scheme 18. For instance:
Method 1.1.1 The compound of Formula 3, wherein R6 is -CI, R7 is -NH2, and R3 is -H, is readily prepared by treating 2-amino-4,6-dichloro-pyrimidine-5-carbaldehyde (Formula 1) with hydrazine, see, F. Seek , Heterocycles 1985, 23, 2521; F. Seek, Helv. Chim. Acta 1986, 69, 1602; and R O. Dempcy, WO 03/022859.
Method 1.1.2 The compounds of Formula 3, wherein R6 is CI, R7 is NH2 and R3 is alkyl, aryl, or heteroaryl have not been previously reported. They can be made by converting a compound of Formula 1 to a compound of Formula 5 in two steps: i) Nucleophilic addition to the carbonyl group; and ii) Oxidation of the resulting alcohol. In a subsequent step, the compound of Formula 5 is converted to the compound of Formula 3 by reaction with hydrazine, or an equivalent thereof. Method 1.1.3 The compounds of Formula 3 wherein R3 is NH2 can be obtained by treatment of a nitrile of Formula 6 with hydrazine (See A. M. El-Reedy, Phosph, Sulf, Silic, 1989, 42, 231). The compounds of Formula 3 wherein R3 is OH can be obtained by treatment of a nitrile of Formula 6 with hydrazine followed by hydrolysis (See Ciba, Patent UK 884,151 (1961)).
Method 1.1.4 The compounds of Formula 3 wherein R is OH can be obtained by treatment of an acid, ester, or activated ester (or equivalent thereof) of Formula 7 with hydrazine (Ciba, Patent UK 884,151 (1961)). 1.2. Assembly of the pyrazoIo[3,4-dl pyrimidine starting from a pyrazole The compounds of Formula 3 can also be made from pyrazoles of Formula 2 (Scheme 19). There are a variety of methods by which the 6-membered ring can be formed (e.g. R. J. Bontems, J. Med. Chem, 1990, 33, 211 and references therein). For instance:
Figure imgf000216_0001
Scheme 19
Compounds of Formula 2 wherein R13 is -CONH2 and R14 is NH2 can be treated with Ph-CO-NCS to give compounds of Formula 3 in which R6 is OH and R7 is NH2 (F. Babin, J. Heterocycl Chem. 1983, 20, 1169.) Compounds of Formula 2 wherein R13 is -CN and R14 is NH2 can be treated with thiourea or guanidine to give compounds of Formula 3 in which R6 is NH2 and R7 is NH2 (H. Kosaku, Heterocycles, 2001, 55, 2279). Compounds of Formula 2 wherein R13 is -CONH2 and R14 is NH2 can be treated with CS2 or EtOCS2K to give compounds of Formula 3 in which R6 is OH and R7 is SH (S. M. Bennett, J. Med. Chem. 1990, 33, 2162).
2. Incorporation of the -R4-R4 fragment 2.1. Alkylation of compounds of Formula 3 Compounds of Formula 3 can be alkykted in the presence of a base such as
K2C03, NaH, Cs2C03, DBU etc. with/without the presence of a catalyst such as Nal, KI, (Bu)3NI etc., and in a polar solvent such as DMF, THF, DMSO etc. using electrophiles such as L'-R4-R5 where L1 is a leaving group (See Scheme 20). Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate , mesykte, triphenylphosphonium (generated under Mitsunobu conditions, e.g. PPh3/DEAD) etc. (See Kasibhatla, WO 03/037860.) / \ I,
Scheme 20
2.2. Preparation of electrophiles Lι-R4-R5 wherein Li is a leaving group and of nucleophiles NH2-R4-R5. 2.2.1. Synthesis of benzyl type electrophile: Benzyl type electrophile, (Fig. 2, supra). The corresponding amines where L1 is NH2 can be prepared "by a variety of methods, for instance from compounds where L1 is leaving group such as chloride, bromide, tosylate, mesykte, etc. using ammonia, or with sodium azide followed by hydrogenation. 2.2.2. Synthesis of pyridyl methyl type electrophile: Pyridyl methyl type electrophiles (Fig. 3 supra) can be prepared from many methods reported in the literature, including those identified in Section 1TLA.2.2.2.
3. Further Elaboration of the ring systems 3.1. Functional group interconversions of R1 Compounds of Formula IIIA, wherein R1 is -OH, can be converted to halides using standard conditions POCl3, POBr3 etc. with/without the presence of base such as Et3N, N,N-dimethylaniline, (i-Pr)2NEt etc. and with/without a catalyst such as BnEt3N+Cl ~ in polar solvents such as CH3CN, CH2C12 etc. Related methods include, but are not limited to, SOCl2/DMF (M. J. Robins , Can. J. Chem. 1973, 12, 3161), PPh3/CCl4 (L. De Napoli , J. Chem. Soc. Perkin Trans 1, 1994, 923), HMPT/CC14 or HMPT/NBS (E. A. Veliz, Tetrahedron Lett, 2000, 41, 1695) or PPh3/I2 (X. Lin , Org. Letters, 2000, 2, 3497). Compounds of Formula IIIA, wherein R1 is -NH2, can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosykting agent (e.g. NaN02/H+, NOBF4, RONO) and a halogen donor (e.g. BF4 ", CuX2, SbX3) where X is a halogen. Compounds of Formula IIIA, wherein R1 is alkyl can be prepared from compounds of Formula 3 where R1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy, J. Med. Chem. 1999, 42, 2064). Compounds of Formula IIIA, wherein R1 is a halide can be converted to compounds wherein R1 is -NH2, -OH, -SH, -OR, -SR with standard reagents, e.g. NH3, NaOH, thiourea, RO", RS", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, H ), wherein R is lower alkyl. 3.2. Functional group interconversions of R2 Compounds of Formula IIIA, wherein R2 is -NH2 can be temporarily protected, e.g. as an amide (Ac20, PivCl, (tBoc)20) or a formamidine (DMF-DMA). Compounds of Formula IIIA, wherein R2 is -NH2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (CI, Br, I) by means of a nitrosykting agent (e.g. NaN02/H NOBF4, RONO) and a halogen donor (e.g. BF4 ", CuX2, SbX3) where X is a halogen. Compounds of Formula IIIA, wherein R2 is a halide can be converted to compounds wherein R2 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g. NH3,
NaOH, thiourea, R80", R8S", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, H"). Compounds of Formula I, wherein R2 is -SH can be converted to halides (Br2).
They can also be oxidized (e.g. H202) and treated with ammonia to give a -NH2 group
(S. M. Bennett, J. Med. Chem. 1990, 33, 2162). Compounds of Formula IIIA, wherein R2 is a sulfide, e.g. MeS-, can be converted to a sulfone, eg. MeS02 ~, and displaced with a nucleophile, e.g. NH3 or NH2-NH2, N3-,
CN-. 3.3. Functional group interconversions of R3: Compounds of Formula IIIA, wherein R3 is H, can be converted to compounds of Formula IIIA wherein R3 is a halogen (e.g. NCS, NBS, NIS, Br2, ICl, I2/KOH) (See F. Seek et al, Helv. Chim. Acta 1999, 82, 105). Compounds of Formula IIIA, wherein R3 is a halogen, can be functionalized by Pd-cakyzed reactions ((a) Sonogashira coupling: E. C. Taylor et al, Tetrahedron , 1992, 48, 8089. (b)carboxyktion: J. W. Pawlik, J. Heterocycl Chem. 1992, 29, 1357 (c) Suzuki coupling: T. Y. I Wu, Org. Lett., 2003, 5, 3587) or by addition of nucleophiles (e.g. hydrazine, B. M. Lynch, Can. J. Chem. 1988, 66, 420) Compounds of Formula I, wherein R3 is a halide, can be converted to compounds wherein R3 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g. NH3, NaOH, thiourea, R80", R8S", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, it) Compounds of Formula IIIA, wherein R3 is MeO can be demethykted to provide compounds of Formula IIIA, wherein R3 is OH (j. D. Anderson, J. Heterocycl. Chem., 199027, 439). 3.4. Further elaboration of R5: R5 especially when it is aryl or heteroaryl, can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkylation/acylation, etc. or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry. The heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H202, 03, MCPBA etc. in polar solvents such as CH2C12, CHC13, CF3COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 21.
Figure imgf000219_0001
Scheme 21 4. Permutations of the order of events As mentioned above, the events (1) assemby of the bicyclic system (2) appendage of the R5-R4- moiety, and (3) further elaboration of the ring systems do not necessarily have to be made in the sequence of (l)-(2)-(3), and it may be beneficial to proceed in a different sequence. For illustrative purposes, Scheme 6 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (l)-(3)-(2). First the bicyclic system is prepared, then it is elaborated, and finally R5 is appended via an alkylation.
Figure imgf000220_0001
Scheme 22
For illustrative purposes, Scheme 23 shows a putative synthesis in which the order of events is not (l)-(2)-(3), but is (2)-(l)-(3). First the R5 group is appended to a pyrimidine via an aromatic nucleophilic substitution, then the bicyclic ring system is constructed, and finally a series of functional group interconversions yields the compound of Formula IIIA.
Figure imgf000221_0001
P = Protecting Group
Scheme 23 Also, if R5 is, for instance, a pyridine, it can be converted to a N-oxide either before or after alkylation.
E. Synthesis of Compounds of Formula IV (Triazolopyrimidines and Related Analogs) The compounds of Formula IV and IVA (see Scheme 24) of the present invention may be synthesized by various methods known in the art, including those described in, for example, Parkanyi, J. Heterocyc Chem., 1990, 27(5), 1409-13; Beauchamp, U.S.
Patent 4,714,701, 1987; Meier, U.S. Patent 5,204,353, 1993. Gillespie, WO 02/055083;
Peterson, J. Med. Chem., 1990, 33(4), 1214-19. The general synthetic strategy is outlined in Scheme 1 and consists of three parts: (1) constructing the bicyclic system, starting from either a pyrimidine or a 1,2,3-triazole, (2) appending the R5-R4- group, and (3) further elaborating the ring systems. Importantly, one skilled in the art will recognize that the sequence of events is not necessarily (l)-(2)-(3), and that these events may be interchanged, provided there be no incompatibility between the reagents and the functional groups specific to the point in case. Method 3
Figure imgf000222_0001
Figure imgf000222_0002
Method 1
Figure imgf000222_0003
Figure imgf000222_0004
Method 2
Figure imgf000222_0005
Figure imgf000222_0006
Scheme 24 The starting material and or the intermediates of, e.g., Formulae 1, 2 or/and 4 can exist in tautomeric forms, and both forms are indiscriminately described in the specifications.
1. Synthesis of Compounds of Formula IV From Pyrimidines
1.1 Method 1 Compounds of Formula IVA can be prepared from the commercially available substituted pyrimidines compounds of Formula 1 where R9 is -OH or halogen, R10 is amino or protected amino or any group that can be converted to amino, such as SMe, R11 is H or -N02, R12 is -Cl, (see Scheme 25) by treating with an excess halogenating agent such as POCl3, oxalyl chloride, or PCI5, and a formulating agent such as DMF to give compounds of Formula IVA where R9 is halogen, and R12 is halogen, followed by halogen displacement with an nucleophile, such as NH2-R4-R5, in solvents such as EtOH, tBuOH etc. in presence of organic bases such as Et3N, (i-pr)2NEt etc. to yield a compound of Formula 2. Formula 2, where R11 is -N02 may then be reduced with zinc and formic acid or sodium dithionite to give compounds of Formula 2 where Ru is -NH2, see Dempcy, U.S. Publication No. 2003/0078413 Al. Compounds of Formula IVA can then be prepared by diazotization with an alkali metal nitrite such as NaN02 in inorganic acids such as HC1, followed by in situ cyclization. See Beauchamp, U.S. Patent 4,714,701; Meier, U.S. Patent 5,204,353. These compounds of Formula IVA can be further modified as necessary.
Figure imgf000223_0001
Scheme 25
Formula 2, where R11 is H, can be treated with diazonium salts such as 4- chloroaniline diazonium salt prepared from 4-chloroaniline and NaN02 inorganic acids such as HC1 to give pyrimidine 5-azo- analog, that can be reduced with zinc dust in EtOH/AcOH (1:1) solution to give compounds of Formula 2, where Rn is -NH2, see Meier, U.S. Patent 5,204,353.
1.2 Method 2
Figure imgf000223_0002
Scheme 26 Also compounds of Formula IVA can be prepared from the commercially available substituted diamino pyrimidines compounds of Formula 1 where R9 is -OH or halogen, R10 is amino or protected amino or any group that can be converted to amino, such as SMe, R11 & R12 are -NH2, (see Scheme 26) following the diazotization method described earlier in Method 1 to give compounds of Formula 4. Formula 4 can be alkykted in the presence of a base such as K2C03, NaH, Cs2C03, DBU etc. with/without the presence of halide such as Nal, KI, (Bu)3NI etc., and in a polar solvent such as DMF, THF, DMSO etc. using electrophiles such as L'-R4-R5 where L1 is a leaving group. Leaving groups include but are not limited to, e.g. , halogen, triflate, tosylate, mesykte etc. See Kasibhatla, PCT WO 03/037860. Compound of Formula I can also be prepared from compounds of Formula D using Mitsunobu alkylation conditions using L^ ^-R5 where L1 is hydroxyl. See Kozai, Chem. Pharm. Bull, 1999, 47(4), 574-575).
2. Synthesis of Compounds of Formula IV From Triazole Compounds of Formula IVA can also be prepared from the substituted triazole as shown in Scheme 27. Accordingly, compounds of Formula 3, wherein R 4 is -NH2, R is -C(0)NH2 and R15 is H (commercially available), can be alkykted in the presence of a base such as KOH, NaOH, K2C03, NaH, Cs2C03, DBU etc. with/without the presence of halide such as Nal, KI, (Bu) NI etc., and in a polar solvent such as DMF, THF, DMSO etc using electrophiles such as L*-R4-R5 where L1 is a leaving group. Leaving groups include but are not limited to, e.g., halogen, triflate, tosylate, mesykte etc. to give compounds of Formula 6. The ring closure can be achieved using many methods reported in the literature, Alhede, J. Org. Chem., 1991, 2139 and references cited therein to give compounds of Formula I, wherein R1 is -OH. These compounds can be converted to the compounds of Formula I, wherein R1 is -Cl using POCl3 as described earlier. Alternately, we can also construct from Formula 3, wherein R14 is -OH or halide, R13 is -C(0)OEt by reacting with guanidine hydrochloride as described in Chowdhury, J. Med. Chem. 1999, 42, 4300.
Figure imgf000225_0001
Figure imgf000225_0002
Scheme 27
3. Preparation of electrophiles L"-R4-R5 wherein L1 is a leaving group and nucleophiles NH?-R4-R5 Benzyl type electophiles (Fig. 2 supra) can be prepared as described above in Section III.A.2.2.1 Synthesis of pyridyl methyl type electrophile: Pyridine methyl type electrophile (Fig. 3 supra) can be prepared from many methods reported in the literature including those identified in Section III. A.2.2.2. The compound R4-R5-NH2 is obtained by treating R4-R5-L* with ammonia at temperatures of 20-160 °C in a pressure vessel, wherein L1 is leaving group such as chloride, bromide, tosylate, mesykte etc. using ammonia, or with sodium azide followed by hydrogenation. 4. Further elaboration of the ring systems. These modifications can be done at any stage depending upon the incompatibility of the functional groups present. 4.1 Functional group interconversions of R1 Compounds of Formula IVA, wherein R is -OH, can be converted to halides using standard conditions POCl3, POBr etc. with/without a base such as Et3N, N,N- dimethykniline, (i-Pr)2NEt etc. and with without a catalyst such as BnEt3N+Cl ~ , in polar solvents such as CH3CN, CH2C12 etc Related methods include, but are not limited to, SOCl2/DMF (M. J. Robins, Can. J. Chem. 1973, 12, 3161), PPh3/CCl4 (L. De Napoli , J. Chem. Soc. Perkin Trans 1, 1994, 923), HMPT/CC14 or HMPT/NBS (E. A. Veliz, Tetrahedron Lett, 2000, 41, 1695) or PPh3/I2 (X. Lin, Org. Letters, 2000, , 3497). Compounds of Formula IVA, wherein R1 is -NH2, can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (Cl, Br, I) by means of a nitrosykting agent (NaNO^H"1", NOBF4, RONO) and a halogen donor (BF4\ CuX2, SbX3). Compounds of Formula IVA, wherein R1 is alkyl can be prepared from compounds of Formula 4 where R1 is halogen and trialkyl aluminum or dialkyl zinc (A. Holy J. Med. Chem. 1999, 42, 2064). Compounds of Formula IVA, wherein R1 is a halide can be converted to compounds wherein R1 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g. NH3, NaOH, thiourea, R80", R8S", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, ϊt) (e.g. B. G. Ugarkar, /. Med. Chem. 2000, 43, 2883-2893 and 2894-2905). Compounds of Formula IVA, wherein R1 is halogen or another leaving group can be treated with ammonia to provide compounds of Formula IVA wherein R1 is NH2 (F. Seela, Liebigs. Ann.Chem. 1985, 315) 4.2. Functional group interconversions of R2 Compounds of Formula IVA, wherein R2 is -NH2 can be temporarily protected, e.g. as an amide (Ac20, PivCl), a carbamate (tBoc)20) or amidine (DMF-DMA). Compounds of Formula IVA, wherein R2 is -NH2 can be converted to halides by a Balz-Schiemann (F) or Sandmeyer reaction (Cl, Br, I) by means of a nitrosykting agent (Na VH*, NOBF4, RONO) and a halogen donor (BF4", CuX2, SbX3 where Xis a halogen). Compounds of Formula IVA, wherein R2 is a halide can be converted to compounds wherein R2 is -NH2, -OH, -SH, -OR8, -SR8 with standard reagents, e.g. NH3,
NaOH, thiourea, R80", R S", with or without a catalyst (e.g. Pd, Ni, Cu, Lewis acid, TU). Compounds of Formula IVA, wherein R2 is -SH can be converted to halides
(Br2). They can also be oxidized (e.g. H202) and treated with ammonia to give a NH2 group (S. M. Bennett, J. Med. Chem. 1990, 33, 2162). Compounds of Formula IVA, wherein R2 is a sulfide, e.g. MeS-, can be converted to a sulfone, e.g., MeS02 ~, and displaced with a nucleophile, e.g. NH3 or NH2-
NH2, N3- CN". 4.3 Further elaboration of R5 R5, especially when it is aryl or heteroaryl, can be further modified as needed, for example by halogenation, nitration, palladium coupling of halogen, Friedel-Crafts alkyktion/acyktion, etc or these modifications can also be done before alkylation, see Jerry March, Advanced Organic Chemistry. The heteroaromatic rings can also be oxidized to their corresponding N-oxides using various oxidizing agents such as H202, 03, MCPBA etc. in polar solvents such as CH2C12, CHC13, CF3COOH etc See Jerry March, Advanced Organic Chemistry, 4th edition, Chapter 19. Examples of modifications are suggested in Scheme 28. Also, if R5 is for instance a pyridine, it can be converted to a N-oxide either before or after alkylation.
Figure imgf000227_0001
Scheme 28
IV. PHARMACEUTICAL COMPOSITIONS, DQSAGING, AND MODES OF ADMINISTRATION The present invention is directed to the clinical use of the heterocyclics, in particular, the pyrazolopyrimidines and their related analogs of Formulae A, I-IV, and their polymorphs, solvates, esters, tautomers, diastereomers, enantiomers, pharmaceutically acceptable salts and prodrugs thereof, for use in treatment or prevention of diseases that are HSP90-dependent. For example, a disorder such as inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorder, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease. The fibrogenetic disorders include but are not limited to scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fϊbrosis. The present invention features pharmaceutical compositions comprising the compound of Formulae A, I-IV, or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt thereof, or prodrug thereof, of any of the preceding aspect and embodiments and one or more pharmaceutical excipients. Those of ordinary skill in the art are familiar with formulation and administration techniques that can be employed with the compounds and methods of the invention, e.g., as discussed in Goodman and Gilman, The Pharmacological Basis of Therapeutics, (current edition), Pergamon; and Remington's, Pharmaceutical Sciences (current edition), Mack Publishing Co., Easton, PA. The compounds utilized in the methods of the instant invention may be administered either alone or in combination with pharmaceutically acceptable carriers, excipients or diluents, in a pharmaceutical composition, according to standard pharmaceutical practices. The compounds can be administered orally or parenterally, including the intraventous, intramuscular, intraperitoneal, subcutaneous, rectal and topical routes of administration. For example, the therapeutic or pharmaceutical compositions of the invention can be administered locally to the area in need of treatment. This may be achieved by, for example, but not limited to, local infusion during surgery, topical application, e.g., cream, ointment, injection, catheter, or implant, said implant made, e.g., out of a porous, non-porous, or gelatinous material, including membranes, such as siakstic membranes, or fibers. The administration can also be by direct injection at the site (or former site) of a tumor or neoplastic or pre-neopkstic tissue. Still further, the compounds or compositions of the invention can be delivered in a vesicle, e.g., a liposome (see, for example, Langer, Science 1990, 249, 1527-1533; Treat et al., Liposomes in the Therapy of Infectious Disease and Cancer, Lopez- Bernstein and Fidler, Ed., Liss, N.Y., pp. 353-365, 1989). The compounds and pharmaceutical compositions used in the methods of the present invention can also be delivered in a controlled release system. In one embodiment, a pump may be used (see, Sefton, 1987, CRC Crit. Ref. Biomed. Eng. 14:201; Buchwald et al. Surgery, 1980, 88, 507; Saudek et al. N. Engl J. Med. 1989, 321, (574). Additionally, a controlled release system can be placed in proximity of the therapeutic target. (See, Goodson, Medical Applications of Controlled Release, 1984, 2, 115-138). The pharmaceutical compositions used in the methods of the instant invention can also contain the active ingredient in a form suitable for oral use, for example, as tablets, troches, lozenges, aqueous or oily suspensions, dispersible powders or granules, emulsions, hard or soft capsules, or syrups or elixirs. Compositions intended for oral use may be prepared according to any method known to the art for the manufacture of pharmaceutical compositions, and such compositions may contain one or more agents selected from the group consisting of sweetening agents, flavoring agents, coloring agents and preserving agents in order to provide pharmaceutically elegant and palatable preparations. Tablets contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for the manufacture of tablets. These excipients may be, for example, inert diluents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, such as microcrystalline cellulose, sodium crosscarmellose, corn starch, or alginic acid; binding agents, for example starch, gelatin, polyvinyl-pyrrolidone or acacia, and lubricating agents, for example, magnesium stearate, stearic acid or talc. The tablets may be un-coated or coated by known techniques to mask the taste of the drug or delay disintegration and absorption in the gastrointestinal tract and thereby provide a sustained action over a longer period. For example, a water soluble taste masking material such as hydroxypropylmethyl-cellulose or hydroxypropylcellulose, or a time delay material such as ethyl cellulose, or cellulose acetate butyrate may be employed as appropriate. Formulations for oral use may also be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water soluble carrier such as polyethyleneglycol or an oil medium, for example peanut oil, liquid paraffin, or olive oil. Aqueous suspensions contain the active material in admixture with excipients suitable for the manufacture of aqueous suspensions. Such excipients are suspending agents, for example sodium carboxymethylcellulose, methylcellulose, hydroxypropylmethyl-cellulose, sodium alginate, polyvinyl-pyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents may be a naturally-occurring phosphatide, for example lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethylene-oxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyethylene sorbitan monooleate. The aqueous suspensions may also contain one or more preservatives, for example ethyl, or n-propyl p-hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose, saccharin or aspartame. Oily suspensions may be formulated by suspending the active ingredient in a vegetable oil, for example arachisd oil, olive oil, sesame oil or coconut oil, or in mineral oil such as liquid paraffin. The oily suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation. These compositions may be preserved by the addition of an anti-oxidant such as butykted hydroxyanisol or alpha-tocopherol. Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified by those already mentioned above. Additional excipients, for example sweetening, flavoring and coloring agents, may also be present. These compositions may be preserved by the addition of an anti-oxidant such as ascorbic acid. The compounds and pharmaceutical compositions used in the methods of the instant invention may also be in the form of an oil-in-water emulsions. The oily phase may be a vegetable oil, for example olive oil or arachis oil, or a mineral oil, for example liquid paraffin or mixtures of these. Suitable emulsifying agents may be naturally- occurring phosphatides, for example soy bean lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate, and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate. The emulsions may also contain sweetening agents, flavoring agents, preservatives and antioxidants. Syrups and elixirs may be formulated with sweetening agents, for example glycerol, propylene glycol, sorbitol or sucrose. Such formulations may also contain a demulcent, a preservative, flavoring and coloring agents and antioxidant. The pharmaceutical compositions may be in the form of a sterile injectable aqueous solution. Among the acceptable vehicles and solvents that may be employed are water, Ringer's solution and isotonic sodium chloride solution. The sterile injectable preparation may also be a sterile injectable oil-in-water microemulsion where the active ingredient is dissolved in the oily phase. For example, the active ingredient may be first dissolved in a mixture of soybean oil and lecithin. The oil solution then introduced into a water and glycerol mixture and processed to form a microemulsion. The injectable solutions or microemulsions may be introduced into a patient's blood-stream by local bolus injection. Alternatively, it may be advantageous to administer the solution or microemulsion in such a way as to maintain a constant circulating concentration of the instant compound. In order to maintain such a constant concentration, a continuous intravenous delivery device may be utilized. An example of such a device is the Deltec CADD-PLUS™ model 5400 intravenous pump. The pharmaceutical compositions may be in the form of a sterile injectable aqueous or oleagenous suspension for intramuscular and subcutaneous administration. This suspension may be formulated according to the known art using those suitable dispersing or wetting agents and suspending agents which have been mentioned above. The sterile injectable preparation may also be a sterile injectable solution or suspension in a non-toxic parenterally-acceptable diluent or solvent, for example as a solution in 1,3- butane diol. In addition, sterile, fixed oils are conventionally employed as a solvent or suspending medium. For this purpose any bland fixed oil may be employed including synthetic mono- or diglycerides. In addition, fatty acids such as oleic acid find use in the preparation of injectables. The compounds of the present invention used in the methods of the present invention may also be administered in the form of suppositories for rectal administration of the drug. These compositions can be prepared by mixing the inhibitors with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug. Such materials include cocoa butter, glycerinated gelatin, hydrogenated vegetable oils, mixtures of polyethylene glycols of various molecular weights and fatty acid esters of polyethylene glycol. For topical use, creams, ointments, jellies, solutions or suspensions, etc., containing a compound or composition of the invention can be used. As used herein, topical application can include mouth washes and gargles. The compounds used in the methods of the present invention can be administered in intranasal form via topical use of suitable intranasal vehicles and delivery devices, or via transdermal routes, using those forms of transdermal skin patches well known to those of ordinary skill in the art. To be administered in the form of a transdermal delivery system, the dosage administration will, of course, be continuous rather than intermittent throughout the dosage regimen. The methods, compounds and compositions of the instant invention may also be used in conjunction with other well known therapeutic agents that are selected for their particular usefulness against the condition that is being treated. For example, the instant compounds may be useful in combination with known anti-cancer and cytotoxic agents. Further, the instant methods and compounds may also be useful in combination with other inhibitors of parts of the signaling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation. The methods of the present invention may also be useful with other agents that inhibit angiogenesis and thereby inhibit the growth and invasiveness of tumor cells, including, but not limited to VEGF receptor inhibitors, including ribozymes and antisense targeted to VEGF receptors, angiostatin and endostatin. Examples of antineopkstic agents that can be used in combination with the compounds and methods of the present invention include, in general, and as appropriate, alkykting agents, anti-metabolites, epidophyllotoxins, antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents and haematopoietic growth factors. Exemplary classes of antineoplastic include the anthracyclines, vinca drugs, mitomycins, bleomycins, cytotoxic nucleosides, epothilones, discodermolides, pteridines, diynenes and podophyllotoxins. Particularly useful members of those classes include, for example, carminomycin, daunorubicin, aminopterin, methotrexate, methopterin, dichloromethotrexate, mitomycin C, porfiromycin, 5-fluorouracil, 6-mercaptopurine, gemcitabine, cytosine arabinoside, podophyllotoxin or podo-phyllotoxin derivatives such as etoposide, etoposide phosphate or teniposide, melphakn, vinbkstine, vincristine, leurosidine, vindesine, leurosine, paclitaxel and the like. Other useful antineoplastic agents include estramustine, carbopktin, cyclophosphamide, bleomycin, gemcitibine, ifosamide, melphakn, hexamethyl mekmine, thiotepa, cytarabin, idatrexate, trimetrexate, dacarbazine, L-asparaginase, camptothecin, CPT-11, topotecan, ara-C, bicalutamide, flutamide, leuprolide, pyridobenzoindole derivatives, interferons and interleukins. When a compound or composition of the invention is administered into a human subject, the daily dosage will normally be determined by the prescribing physician with the dosage generally varying according to the age, weight, and response of the individual patient, as well as the severity of the patient's symptoms. In one exemplary application, a suitable amount of compound is administered to a mammal undergoing treatment for cancer, for example, breast cancer. Administration typically occurs in an amount of between about 0.01 mg/kg of body weight to about 100 mg/kg of body weight per day (administered in single or divided doses), more preferably at least about 0.1 mg/kg of body weight per day. A particular therapeutic dosage can include, e.g., from about 0.01 mg to about 1000 mg of compound, and preferably includes, e.g., from about 1 mg to about 1000 mg. The quantity of active compound in a unit dose of preparation may be varied or adjusted from about 0.1 mg to 1000 mg, preferably from about 1 mg to 300 mg, more preferably 10 mg to 200 mg, according to the particular application. The amount administered will vary depending on the particular IC50 value of the compound used and the judgment of the attending clinician taking into consideration factors such as health, weight, and age. In combinational applications in which the compound is not the sole active ingredient, it may be possible to administer lesser amounts of compound and still have therapeutic or prophylactic effect. Preferably, the pharmaceutical preparation is in unit dosage form. In such form, the preparation is subdivided into unit doses containing appropriate quantities of the active component, e.g., an effective amount to achieve the desired purpose. The actual dosage employed may be varied depending upon the requirements of the patient and the severity of the condition being treated. Determination of the proper dosage for a particular situation is within the skill of the art. Generally, treatment is initiated with smaller dosages which are less than the optimum dose of the compound. Thereafter, the dosage is increased by small amounts until the optimum effect under the circumstances is reached. For convenience, the total daily dosage may be divided and administered in portions during the day if desired. The amount and frequency of administration of the compounds and compositions of the present invention used in the methods of the present invention, and if applicable other chemotherapeutic agents and/or radiation therapy, will be regulated according to the judgment of the attending clinician (physician) considering such factors as age, condition and size of the patient as well as severity of the disease being treated. The chemotherapeutic agent and/or radiation therapy can be administered according to therapeutic protocols well known in the art. It will be apparent to those skilled in the art that the administration of the chemotherapeutic agent and/or radiation therapy can be varied depending on the disease being treated and the known effects of the chemotherapeutic agent and/or radiation therapy on that disease. Also, in accordance with the knowledge of the skilled clinician, the therapeutic protocols (e.g., dosage amounts and times of administration) can be varied in view of the observed effects of the administered therapeutic agents (i.e., antineoplastic agent or radiation) on the patient, and in view of the observed responses of the disease to the administered therapeutic agents. Also, in general, the compounds of the invention need not be administered in the same pharmaceutical composition as a chemotherapeutic agent, and may, because of different physical and chemical characteristics, be administered by a different route. For example, the compounds/compositions may be administered orally to generate and maintain good blood levels thereof, while the chemotherapeutic agent may be administered intravenously. The determination of the mode of administration and the advisability of administration, where possible, in the same pharmaceutical composition, is well within the knowledge of the skilled clinician. The initial administration can be made according to established protocols known in the art, and then, based upon the observed effects, the dosage, modes of administration and times of administration can be modified by the skilled clinician. The particular choice of compound (and where appropriate, chemotherapeutic agent and/or radiation) will depend upon the diagnosis of the attending physicians and their judgment of the condition of the patient and the appropriate treatment protocol. The compounds/compositions of the invention (and where appropriate chemotherapeutic agent and/or radiation) may be administered concurrently (e.g., simultaneously, essentially simultaneously or within the same treatment protocol) or sequentially, depending upon the nature of the proliferative disease, the condition of the patient, and the actual choice of chemotherapeutic agent and/or radiation to be administered in conjunction (i.e., within a single treatment protocol) with the compound/composition. In combinational applications and uses, the compound/composition and the chemotherapeutic agent and/or radiation need not be administered simultaneously or essentially simultaneously, and the initial order of administration of the compound/composition, and the chemotherapeutic agent and/or radiation, may not be important. Thus, the compounds/compositions of the invention may be administered first followed by the administration of the chemotherapeutic agent and/or radiation; or the chemotherapeutic agent and/or radiation may be administered first followed by the administration of the compounds/compositions of the invention. This alternate administration may be repeated during a single treatment protocol. The determination of the order of administration, and the number of repetitions of administration of each therapeutic agent during a treatment protocol, is well within the knowledge of the skilled physician after evaluation of the disease being treated and the condition of the patient. For example, the chemotherapeutic agent and/or radiation may be administered first, especially if it is a cytotoxic agent, and then the treatment continued with the administration of the compounds/compositions of the invention followed, where determined advantageous, by the administration of the chemotherapeutic agent and/or radiation, and so on until the treatment protocol is complete. Thus, in accordance with experience and knowledge, the practicing physician can modify each protocol for the administration of a compound/composition for treatment according to the individual patient's needs, as the treatment proceeds. The attending clinician, in judging whether treatment is effective at the dosage administered, will consider the general well-being of the patient as well as more definite signs such as relief of disease-related symptoms, inhibition of tumor growth, actual shrinkage of the tumor, or inhibition of metastasis. Size of the tumor can be measured by standard methods such as radiological studies, e.g, CAT or MRI scan, and successive measurements can be used to judge whether or not growth of the tumor has been retarded or even reversed. Relief of disease-related symptoms such as pain, and improvement in overall condition can also be used to help judge effectiveness of treatment.
V. ASSAYS FOR DETERMINING HSP90 BINDING AND DOWNSTREAM EFFECT A variety of in vitro and in vivo assays are available to test the effect of the compounds of the invention on HSP90. HSP90 competitive binding assays and functional assays can be performed as known in the art substituting in the compounds of the invention. Chiosis et al. Chemistry & Biology 2001, 8, 289-299, describe some of the known ways in which this can be done. For example, competition binding assays using, e.g., geldanamycin or 17-AAG as a competitive binding inhibitor of HSP90 can be used to determine relative HSP90 affinity of the compounds of the invention by immobilizing the compound of interest or other competitive inhibitor on a gel or solid matrix, preincubating HSP90 with the other inhibitor, passing the preincubated mix over the gel or matrix, and then measuring the amount of HSP90 that retains or does not retain on the gel or matrix. Downstream effects can also be evaluated based on the known effect of HSP90 inhibition on function and stability of various steroid receptors and signaling proteins including, e.g., Rafl and HER2. Compounds of the present invention induce dose- dependent degradation of these molecules, which can be measured using standard techniques. Inhibition of HSP90 also results in up-reguktion of HSP90 and related chaperone proteins that can similarly be measured. Antiproliferative activity on various cancer cell lines can also be measured, as can morphological and functional differentiation related to HSP90 inhibition. Many different types of methods are known in the art for determining protein concentrations and measuring or predicting the level of proteins within cells and in fluid samples. Indirect techniques include nucleic acid hybridization and amplification using, e.g., polymerase chain reaction (PCR). These techniques are known to the person of skill and are discussed, e.g., in Sambrook, Fritsch & Maniatis Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y., 1989; Ausubel, et al. Current Protocols in Molecular Biology, John Wiley & Sons, NY, 1994, and, as specifically applied to the quantification, detection, and relative activity of HER2/Neu in patient samples, e.g., in U.S. Patents 4,699,877, 4,918,162, 4,968,603, and 5,846,749. A brief discussion of two generic techniques that can be used follows. The determination of whether cells overexpress or contain elevated levels of HER2 can be determined using well known antibody techniques such as immunoblotting, radioimmunoassays, western blotting, immunoprecipitation, enzyme- linked immunosorbant assays (ELISA), and derivative techniques that make use of antibodies directed against HER2. As an example, HER2 expression in breast cancer cells can be determined with the use of an immunohistochemical assay, such as the Dako Hercep™ test (Dako Corp., Carpinteria, CA). The Hercep™ test is an antibody staining assay designed to detect HER2 overexpression in tumor tissue specimens. This particular assay grades HER2 expression into four levels: 0, 1, 2, and 3, with level 3 representing the highest level of HER2 expression. Accurate quantitation can be enhanced by employing an Automated Cellular Imaging System (ACIS) as described, e.g., by Press, M. et al. Modern Pathology 2000, 13, 225A. Antibodies, polyclonal or monoclonal, can be purchased from a variety of commercial suppliers, or may be manufactured using well-known methods, e.g., as described in Harlow et al. Antibodies: A Laboratory Manual, 2nd ed; Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y., 1988. HER2 overexpression can also be determined at the nucleic acid level since there is a reported high correlation between overexpression of the HER2 protein and amplification of the gene that codes for it. One way to test this is by using RT-PCR. The genomic and cDNA sequences for HER2 are known. Specific DNA primers can be generated using standard, well-known techniques, and can then be used to amplify template already present in the cell. An example of this is described in Kurokawa, H. et al. Cancer Res. 2000, 60, 5887-5894. PCR can be standardized such that quantitative differences are observed as between normal and abnormal cells, e.g., cancerous and noncancerous cells. Well known methods employing, e.g., densitometry, can be used to quantitate and/or compare nucleic acid levels amplified using PCR. Similarly, fluorescent in situ hybridization (FISH) assays and other assays can be used, e.g., Northern and/or Southern blotting. These rely on nucleic acid hybridization between the HER2 gene or mRNA and a corresponding nucleic acid probe that can be designed in the same or a similar way as for PCR primers, above. See, e.g., Mitchell
MS, and Press M.F. Oncol, Suppl 1999, 12, 108-116. For FISH, this nucleic acid probe can be conjugated to a fluorescent molecule, e.g., fluorescein and or rhodamine, that preferably does not interfere with hybridization, and which fluorescence can later be measured following hybridization. See, e.g., Kurokawa, H et al, Cancer Res. 2000, 60, 5887-5894 (describing a specific nucleic acid probe having sequence 5'-FAM-
NucleicAcid-TAMRA-p-3' sequence). ACIS-based approaches as described above can be employed to make the assay more quantitative (de la Torre-Bueno, J., et al. Modern Pathology 2000, 13, 221 A). Immuno and nucleic acid detection can also be directed against proteins other than HSP90 and HER2, which proteins are nevertheless affected in response to HSP90 inhibition. The following examples are offered by way of illustration only and are not intended to be limiting of the full scope and spirit of the invention.
EXAMPLES
I. PREPARATION OF PYRROLQPYRIMΓDΓNES AND RELATED ANALOGS (COMPOUNDS OF FORMULA I)
A. Materials and Methods The chemical reagents used to create the novel products of the invention below are all available commercially, e.g., from Aldrich Chemical Co., Milwaukee, WI, USA. Otherwise their preparation is facile and known to one of ordinary skill in the art, or it is referenced or described herein. The final compounds were usually purified by preparative TLC (silica gel 60 A,
Whatman Partisil PK6F) or flash chromatography (silica gel 60 A, EMD Chemicals) using EtOAc/hexane or MeOH/CH2Cl2 as eluents. Rf s were measured using silica gel TLC plates (silica gel 60 A, EMD Chemicals). Analytical HPLC chromatograms were obtained using a C18 column (Agilent Zorbax 300SB-C18; 5 microns; 4.6 mm x 150 mm). A gradient was applied between solvent A (0.1% TFA in H20) and solvent B (0.5% TFA in CH3CN) increasing the proportion of A linearly from 5% (t=0) to 100% (t=7.00 min), with a constant flow rate of 1 mL/min. The samples were diluted to typically 0.1-1 mg/mL in MeOH or CH3CN and the injection volumes were typically 10 μL. The column was not heated, and UV detection was effected at 254 run. 'H-NMR spectra were recorded on a Bruker Avance 400 MHz spectrometer. The chemical names were generated using the Beilstein Autonom 2.1 software.
B. General Procedures
1. General procedures to prepare and manipulate the pyrroIo[2,3-dl pyrimidine ring General procedure 1.1: Preparation of pyrrolo[2,3-d]pyrimidines (R° ≠ OH)
Figure imgf000240_0001
A suspension of 4-diamino-6-hydroxypyrimidine (6 mmol), AcONa (12 mmol) and α-haloaldehyde (6 mmol ) in CH3CN (20 mL) and H20 (20 mL) was stirred at 22-40
°C overnight whereupon the starting materials gradually dissolved and the desired pyrrolo[2,3-d]pyrimidine precipitated. The precipitate was collected by filtration and washed (water, acetontrile, ether) and air-dried ((a) C. J. Barnett, Org. Proc. Res.
Develop. 1999, 3, 184. (b) F. Seek, Liebigs Ann. Chem. 1987, 15). General Procedure 1.2: Preparation of pyrrolo[2,3-d]pyrimidines (R° = OH)
Figure imgf000240_0002
A suspension of (2-amino-4,6-dichloro-pyrimidin-5-yl)-acetic acid ethyl ester, R ) 53- τR>44-NH2 and EtN(i-Pr)2 in BuOH was heated at reflux for 24h whereupon the solvent was removed under reduce pressure. The residue was then dissolved in CH2C1 and washed with sat. NaHC03 solution and dried with Na2S04. The crude material was purified by preparative TLC or flash chromatography (EtOAc/hexane or MeOH/CH2Cl2) to give the pure pyrrolo[3,4-d]pyrimidin-6-one. General procedure 1.3: Alkylation of pyrrolo[2,3-d]pyrimidines at N-7
Figure imgf000241_0001
A suspension of the 4-chloro-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine (1 mmol), benzyl halide (1 mmol) and K2C03 or Cs2C03 (1-5 mmol) in dry DMF (5 mL) was heated to 40 °C for 3 to 10 h. Work-up (EtOAc) and purification by preparative TLC or flash chromatography (EtOAc/hexane or MeOH/CH2Cl2) yielded the pure N-7 alkykted product. General procedure 1.4: Aminomethyktion of pyrrolo[2,3- d]pyrimidines at C-5 NR9R9
Figure imgf000241_0002
A solution of 2-amino-7H-pyrrolo[2,3-d]pyrimidin-4-ol, formaldehyde (2-5 equiv.) and HNR9R9 (2-5 equiv.) in 80% aq. acetic acid was heated in a sealed tube to 60
°C overnight, concentrated, extracted in MeOH:CH2Cl2 (1:10), washed with sat. NaHC03 and concentrated. See H. Akimoto, J. Chem. Soc. Perkin Trans 1. 1998, 1637. General procedure 1.5: Alkylation of pyrrolo[2,3-d]pyrimidin-6- one at C-5
Figure imgf000241_0003
To a solution of pyrrolo[2,3-d]pyrimidin-6-one in THF at -78°C was added a base such as LDA, LHMDS or KHMDS and after 30 min, the alkyl halide was further added to give monoalkykted and bisalkylated pyrrolo[2,3-d]pyrimidin-6-ones which were purified by preparative TLC or flash chromatography (EtOAc/hexane or MeOH/CH2Cl2). General procedure 1.6: Oxidation of pyrrolo[2,3-d]pyrimidines at C-5
Figure imgf000242_0001
A solution of 2-amino-4-chloro-pyrrolo[3,4-d]pyrimidin-6-one and Se02 in dioxane was heated at reflux until completion (1 h) whereupon the solvent was removed under reduce pressure. The crude was purified by preparative TLC or flash chromatography (EtOAc/hexane or Me0H/CH2Cl2) to give the pure 4-chloro-5-hydroxy- 2-imino-2,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one.
2. General procedures to manipulate the pyridine ring General procedure 2.1: Preparation of pyridine N-oxides A solution of the pyridine derivative (1 mmol) in dichloromethane or chloroform
(5 mL) was cooled by means of an ice-bath, treated with m-CPBA (1.1 to 3 mmol) in three portions, and allowed to warm to r.t. The mixture was extracted with dichloromethane and washed with aqueous NaOH, followed by water. Drying (Na2S04) and concentration afforded the pyridine N-oxide. General procedure 2.2: Preparation of 2-(acetoxymethyl)- pyridines A solution of the 2-methylpyridine N-oxide (1.0 mmol) in acetic anhydride (5 mL) was heated to reflux for 0.5 h. Work-up (EtOAc), drying (MgS04), evaporation and purification by preparative TLC or flash chromatography afforded the 2-(acetoxymethyl) pyridine. General procedure 2.3: Preparation of 2-(hydroxymethyl)- pyridines A suspension of 2-acetoxymethyl-pyridine derivative and solid K2C03 in methanol was heated to 50 °C for 5-30 min. Evaporation, work-up (EtOAc), and drying (MgS04) afforded the 2-(hydroxymethyl)-pyridine. General procedure 2.4: Preparation of 2-(bromomethyl)-pyridines A solution of 2-(hydroxymethyl)-pyridine (1.0 mmol) and triphenyl phosphine (1.2 mmol) in dichloromethane or chloroform (5 mL) was cooled to 0 °C. A solution of CBr4 (1.5 mmol) in dichloromethane or chloroform was added dopwise, and the resulting mixture was stirred at 0 °C for 0.5-1 h. Work-up followed and purification by flash chromatography afforded the 2-(bromomethyl)-pyridine. General procedure 2.5: Preparation of 2-(aminomethyl)-pyridines The 2-(chloromethyl)-pyridine derivative in a solution of ammonia in MeOH was heated at 100°C overnight whereupon it was concentrated under reduce pressure and purified by flash chromatography (MeOH/CH2Cl2) to afford the 2-(aminomethyl)- pyridine derivative. General procedure 2.6: Preparation of 2-chloropyridines A suspension of 2-(hydroxymethyl)-pyridine (10 g) in POCl3 (30 mL) was stirred at 110 °C for 1.5 h. The resulting viscous oil was cooled to r.t. and poured onto ice water (500 g). The pH was adjusted to 10 with solid KOH. Work-up (CHC13), drying (MgS0 ) and evaporation gave the 2-chloropyridine, which was used without purification. General procedure 2.7: Preparation of pyridinium salts. A solution of the pyridine was heated in MeOH until it dissolved. A methanolic solution of acid (1.0 equiv of e.g. HC1, MsOH) was added, and the solvent was evaporated to give the pyridinium salt.
3. General procedure to manipulate benzene rings General procedure 3.1: Halogenation of benzene rings. Variant 1 : A solution of the aromatic compound in MeOH/THF/acetate buffer (IN in each AcOH and AcONa) was treated with Br2 (1.3-equiv) at r.t. for 5 min. The excess bromine and solvent were removed on a rotary evaporator. Work-up (CHC13) and flash chromatography afforded the desired bromobenzene. Variant 2: A solution of the aromatic compound (7 mmol) and n-halosuccinimide (NCS, NBS, or NIS, 1.06 equiv) in acetic acid (40 mL) was heated to 40-90 °C for 0.3-1 h. Evaporation, work-up (EtOAc) and flash chromatography afforded the desired halogenated benzene.
C. Preparation of Intermediates
Example 1. 2-Chloro-l-chloromethyl-3,4,5-trimethoxy-benzene
Figure imgf000244_0001
The title compound was obtained by chlorination of 5-chloromethyl-l,2,3- trimethoxy-benzene with NCS according to the general procedure 3.1. 'H-NMR (CDC13): δ 6.82 (s, 1H), 4.70 (s, 1H), 3.93 (s, 3H), 3.90 (s, 3H) 3.87 (s, 3H).
Example 2. 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethyl-pyridine
Figure imgf000244_0002
Step 1: 2-Chloromethyl-4-methoxy-3,5-dimethylpyridine-l -oxide The title compound was obtained by oxidation of 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine according to the general procedure 2.1. HPLC Rt: 4.46 min. 'H-NMR (CDC13): δ 8.05 (s, 1H), 4.93 (s, 2H), 3.77 (s, 3H), 2.37 (s, 3H), 2.24 (s, 3H). Step 2: 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine The title compound was obtained by treating 2-chloromethyl-4-methoxy-3,5- dimeth.ylpyridine-1 -oxide with POCI3 according to the general procedure 2.6. HPLC Rt: 6.757 min. 1H-NMR (CDCI3): δ 4.64 (s, 2H), 3.79 (s, 3H), 2.35 (s, 3H), 2.33 (s, 3H). Example 3. 4-Chloro-2-chloromethyl-3,5-dimethyl-pyridine
Figure imgf000245_0001
The title compound was obtained by treating 2-chloromethyl-3,5-dimethyl- pyridin-4-ol (Tarbit, et al. WO 99/10326) with P0C13 in the same manner as in the general procedure 2.6 (74% yield). HPLC Rt: 5.54 min. 'H-NMR (CDCI3): 8.24 (s, IH), 4.71 (s, 2H), 2.48 (s, 3H), 2.36 (s, 3H).
Example 4. 4-Bromo-2-bromomethyI-3,5-dimethyl-pyridine 4-Bromo-2-bromomethyl-3,5-dimethyl-pyridine was prepared by any of the following three methods: Method 1
Figure imgf000245_0002
Step 1: 2,3,5-Collidine-N-oxide 2,3,5-Collidine-N-oxide was obtained by oxidation of 2,3,5-collidine according to the general procedure 2.1 in 70% yield. HPLC Rt: 3.96 min. 'H-NMR (CDCI3): δ 8.03 (s, IH), 6.90 (s, IH), 2.47 (s, 3H), 2.31 (s, 3H), 2.24 (s, 3H). m/z (%) 138.2 (M+l, 100%). Rf (20% MeOH/EtOAc): 0.35. Step 2: 4-Bromo-2,3,5-collidine-N-oxide 2,3,5-collidine-N-oxide (1.3 g, 10 mmol) and K2C03 (2.9 g, 20 mmol) were suspended in 10 mL of CC14. Bromine (1 mL, 20 mmol) was added dropwise, and the reaction mixture was heated to reflux for 2 h. Work-up (EtOAc) and flash chromatography (10% MeOH/EtOAc) afforded the title compound as a solid (1.05 g, 51% yield). HPLC Rt: 5.24 min. 'H-NMR (CDC13): δ 8.06 (s, ]H), 2.56 (s, 3H), 2.43 (s, 3H), 2.31 (s, 3H). m/z (%) 216.2 (M+l, 100%), 218.2 (M+3, 100%). Rf (20% MeOH/EtOAc): 0.45. Step 3: Acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester 4-Bronτo-2,3,5-collidine-N-oxide (0.25g, 11 mmol) was dissolved in acetic anhydride (5 mL) and the solution was heated to reflux for 30 min. Work-up and flash . chromatography (50% Hexane/EtOAc) afforded the title compound (0.27 g, 96% yield). Rf (50% Hexane/EtOAc): 0.70. HPLC Rt: 4.76 min. 'H-NMR (CDC13): δ 8.26 (s, IH), 5.27 (s, 2H), 2.46 (s, 3H), 2.41 (s, 3H), 2.14 (s, 3H). Step 4: 4-Bromo-3,5-dimethyl-pyridin-2-yl methanol A suspension of acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester (0.26 g, 1.0 mmol) and K2C03 (excess) in MeOH (5 mL) was heated to 50 °C for 15 min. Work-up (CHC13), evaporation, and filtration through a silica gel pad (eluent: 100% EtOAc) gave the title compound as a white solid (0.19 g, 88% yield). Rf (50% Hexane/EtOAc): 0.5. HPLC Rt: 3.80 min. 'H-NMR (CDC13): δ 8.23 (s, IH), 4.70 (s, 2H), 2.46 (s, 3H), 2.30 (s, 3H). Step 5: 4-Bromo-2-bromomethyl-3,5-dimethyl-pyridine The title compound was obtained from 4-bromo-3,5-dimethyl-pyridin-2-yl methanol according to the general procedure 2.4. HPLC Rt: 6.32 min. 'H-NMR (CDC13): δ 8.22 (s, IH), 4.63 (s, 2H), 2.52 (s, 3H), 2.40 (s, 3H). Method 2:
Figure imgf000246_0001
Step 1: 2-chloromethyl-3,5-dimethyl-pyridin-4-ol The title compound was obtained by heating 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine hydrochloride in toluene as described in the patent by Tarbit, et al WO 99/10326. Step 2: 4-bromo-2-chloromethyl-3,5-dimethyl pyridine A mixture of 2-chloromethyl-3,5-dimethyl-pyridin-4-ol (8.2 g, 47.8 mmol) and POBr3 (60g, 209 mmol) was stirred at 130 °C for 3 h. The resulting viscous oil was cooled to r.t. and poured onto ice water. The pH was adjusted to 10 with solid KOH. Work-up (CHC13), drying (MgS04) and evaporation afforded the title compound as a purple solid (8.7 g, 78% yield) which was used without purification. HPLC Rt: 6.03 min. 'H-NMR (CDC13): 8.20 (s, IH), 4.62 (s, 2H), 2.50 (s, 3H), 2.38 (s, 3H).
Method 3:
Figure imgf000247_0001
Step l: 4-bromo-2-chloromethyl-3,5-dimethyl pyridine A suspension of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine (3.24 g, 14.6 mmol) in PBr3 (8.0 mL, 85.1 mmol, 5.8 equiv.) was heated to 80 °C under nitrogen. A catalytic amount of DMF (0.50 mL, 6.4 mmol, 0.44 equiv.) was added, whereupon the suspension rapidly turned into an orange solution. After 40 min., the reaction was still incomplete as judged by HPLC. The temperature was raised to 110 °C and the reaction was prolonged for 30 min, at which point it was complete. The mixture was poured over ice, made basic with cone. aq. NEUOH and extracted into EtOAc. Washing with water, drying (brine, MgS0 ) and concentration gave the title compound as a pink solid (1.51 g, 44%) containing 10% of an impurity by 'H-NMR. The crude was used without further purification. 'H-NMR (CDC13) δ 8.19 (s, IH), 4.59 (s, 2H), 2.48 (s, 3H), 2.37 (s, 3H).
D. Preparation of Final Compounds
Example 5. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-yImethyl)-7H- pyrrolo [2,3-d] pyrimidin-2-ylamine
Figure imgf000248_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ylamine (F. Seek, Liebigs Ann. Chem. 1987, 75) with 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine hydrochloride according to the general procedure 1.3. HPLC Rt: 4.709 min. 1H-NMR (CDC13): δ 8.23 (s, IH), 6.90 (m, IH), 6.38 (m IH), 5.35 (s, 2H), 4.99 (s, 2H), 3.75 (s, 3H), 2.26 (s, 3H), 2.21 (s, 3H).
Example 6. 7-(2-Bromo-3,4,5-trimethoxy-benzyl)-4-chIoro-7H-pyrroIo[2,3- d] pyrimidin-2-ylamine
Figure imgf000248_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ylamine with 2-bromo-l-chloromethyl-3,4,5-trimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.937 min. 'H-NMR (DMSO-d6): δ 7.11 (m IH), 6.73(s, 2H), 6.42 (s, IH), 6.37 (m IH), 5.23 (s, 2H), 3.79 (s, 3H), 3.75 (s, 3H), 3.61 (s, 3BQ. Example 7. 4-Chloro-7-(2-iodo-3,4,5-trimethoxy-benzyl)-7H-pyrrolo [2,3- d] pyrimidin-2-ylamine
Figure imgf000249_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ylamine with l-chloromethyl-2-iodo-3,4,5-trimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 7.069 min. 'H-NMR (DMSO-d6): δ 7.08 (m IH), 6.74 (s, 2H), 6.38 (m IH), 6.36 (s, IH), 5.19 (s, 2H), 3.80 (s, 3H), 3.77 (s, 3H), 3.60 (s, 3H).
Example 8. 4-Chloro-7-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-7H- pyrr olo [2,3-d] pyrimidin-2-ylamine
Figure imgf000249_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine 1 -oxide according to the general procedure 1.3. HPLC Rt: 5.079 min. 'H-NMR (DMSO-d6): δ 8.18 (s, IH), 7.29 (m, IH), 6.68(s, 2H), 6.24 (m, IH), 5.38 (s, 2H), 3.70 (s, 3H), 2.42 (s, 3H), 2.17 (s, 3H). ESI-MS 334.2 (M+l). Example 9. 4-Chloro-7-(3,4,5-trimethoxy-benzyϊ)-7H-pyrrolo [2,3-d]pyrimidin-2- ylamine
Figure imgf000250_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 5-chloromethyl-l,2,3-trimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.036 min. 'H-NMR (CDC13): δ 6.82 (m, IH), 6.41(s, 2H), 6.40 (m, IH), 5.36 (s, 2H), 5.16 (s, 2H), 3.81 (s, 3H), 3.78 (s, 6H).
Example 10. 4-Chloro-7-(6-chloro-4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)- 7H-pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000250_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 2-chloro-6-chloromethyl-4-methoxy-3 ,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.880 min. 'H-NMR (DMSO-d6): δ 7.06 (m, IH), 6.63(s, 2H), 6.32 (m, IH), 5.29 (s, 2H), 3.74 (s, 3H), 2.25 (s, 3H), 2.21 (s, 3H).
Example 11. 4-Chloro-7-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000250_0003
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 5.878 min. 'H-NMR (CDC13): δ 8.27 (s, IH), 6.89 (m, IH), 6.40 (m, IH), 5.40 (s, 2H), 4.94 (s, 2H), 2.39 (s, 3H), 2.37 (s, 3H).
Example 12. 4-Chloro-7-(2-chloro-4,5-dimethoxy-benzyl)-7H-pyrrolo[2,3- d] pyrimidin-2-ylamine
Figure imgf000251_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-bromomethyl-2-chloro-4,5-dimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.635 min. 'H-NMR (CDCI3): δ 6.91 (m, IH), 6.90 (s, IH), 6.71 (s, IH), 6.42 (m, IH), 5.30 (s, 2H), 4.97 (s, 2H), 3.88 (s, 3H), 3.75 (s, 3H).
Example 13. 7-(4-Bromo-3,5-dimethyl-pyridin-2-ylmethyl)-4-chloro-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000251_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.072 min. 'H-NMR (DMSO-d6): δ 8.15 (s, IH), 7.10 (m, IH), 6.60(s, IH), 6.30 (m, IH), 5.40(s, 2H), 2.46 (s, 3H), 2.30 (s, 3H). Example 14. 4-Chloro-7-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-7H- pyr rolo [2,3-d] pyrimidin-2-ylamine
Figure imgf000252_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 5.610 min. 'H-NMR (DMSO-d6): δ 8.36 (s, IH), 7.26 (m, IH), 6.69(s, IH), 6.21 (m, IH), 5.43(s, 2H), 2.60 (s, 3H), 2.27 (s, 3H).
Example 15. 7-(4-Bromo-3,5-dimethyl-l-oxy-pyridin-2-ylmethyI)-4-chloro-7H- pyrrolo [2,3-d] pyrimidin-2-ylamine
Figure imgf000252_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 5.734 min. -NMR (DMSO-d6): δ 8.33 (s, IH), 7.24 (m, IH), 6.69 (s, IH), 6.25 (m, IH), 5.47(s, 2H), 2.65 (s, 3H), 2.29 (s, 3H). Example 16. 4-Chloro-7-(3,5-dimethoxy-2-nitro-benzyl)-7H-pyrrolo [2,3- d] pyrimidin-2-ylamine
Figure imgf000253_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-bromomethyl-4,5-dimethoxy-2-nitro-benzene according to the general procedure 1.3. HPLC Rt: 6.345 min. 'H-NMR (DMSO-d6): δ 7.73 (s, IH), 7.16 (m, IH), 6.72 (s, 2H), 6.41 (s, IH), 6.40 (m, IH), 5.58(s, 2H), 3.92 (s, 3H), 3.62 (s, 3H).
Example 17. 4-Chloro-7-(3,4-dichloro-benzyι)-7H-pyrrolo [2,3-d]pyrimidin-2- ylamine
Figure imgf000253_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-bromomethyl- 1 ,2-dichloro-benzene according to the general procedure 1.3. HPLC Rt: 7.148 min. 1H-NMR (DMSO-d6): δ 7.60 (m, IH), 7.59 (m, IH), 7.25(q, IH), 7.12(m, IH), 6.71 (s, 2H), 6.37 (q, IH), 5.26(s, 2H).
Example 18. 4-Chloro-7-(3,5-dimethoxy-benzyl)-7H-pyrrolo[2,3-d]pyrimidin-2- ylamine
Figure imgf000253_0003
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-chloromethyl-3,5-dimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.423 min. 'H-NMR (DMSO-d6): δ 7.21(m, IH), 6.69 (s, 2H), 6.40 (m, 3H), 6.34 (m, IH), 5.34 (s, 2H), 3.68 (s, 6H).
Example 19. 4-Chloro-7-(2,5-dimethoxy-benzyl)-7H-pyrrolo[2,3-d]pyrimidin-2- ylamine
Figure imgf000254_0001
The title compound was obtained by alkylation of 4-chloro-7H-pyπolo[2,3- d]pyrimidin-2-ykmine with 2-chloromethyl-l,4-dimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.537 min. 'H-NMR (DMSO-d6): δ 7.13 (m, IH), 6.85 (d, IH), 6.82 (m, IH), 6.68 (s, 2H), 6.35 (m, IH), 6.22 (d, IH), 3.78 (s, 3H), 3.60 (s, 3H).
Example 20. 4-Bromo-7-(4-methoxy-3,5-dimethyI-l-oxy-pyridin-2-yImethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000254_0002
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine (obtained as described in F. Seek, Liebigs Ann. Chem. 1987, 15 for 4-chloro-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine, but substituting POCl3 with POBr3) with 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 5.158 min. Η-NMR (DMSO-d6): δ 8.18 (s, IH), 7.29 (m, IH), 6.69 (s, 2H), 6.15 (m, IH), 5.37(s, 2H), 3.70 (s, 3H), 2.42 (s, 3H), 2.17 (s, 3H). Example 21. 4-Bromo-7-(4-chIoro-3,5-dimethyl-pyridin-2-ylmethyl)-7H- pyrrolo [2,3-d] pyrimidin-2-ylamine
Figure imgf000255_0001
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 5.803 min. 'H-NMR (DMSO-d6): δ 8.20 (s, IH), 7.04 (m, IH), 6.61 (s, 2H), 6.21 (m, IH), 5.38(s, 2H), 2.42 (s, 3H), 2.28 (s, 3H).
Example 22. 4-Bromo-7-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000255_0002
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 5.688 min. 'H-NMR (DMSO-d6): δ 8.35 (s, IH), 7.25 (m, IH), 6.70 (s, 2H), 6.15 (m, IH), 5.43 (s, 2H), 2.60 (s, 3H), 2.27 (s, 3H).
Example 23. 4-Bromo-7-(4-bromo-3,5-dimethyl-pyridin-2-yImethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000255_0003
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 5.996 min. Η-NMR (DMSO-d6): δ 8.15 (s, IH), 7.05 (m, IH), 6.61 (s, 2H), 6.21 (m, IH), 5.43 (s, 2H), 2.46 (s, 3H), 2.30 (s, 3H).
Example 24. 4-Bromo-7-(4-bromo-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000256_0001
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 5.798 min. 'H-NMR (DMSO-d6): δ 8.33 (s, IH), 7.24 (m, IH), 6.71 (s, 2H), 6.15 (m, IH), 5.46 (s, 2H), 2.64 (s, 3H), 2.29 (s, 3H).
Example 25. 4-Bromo-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ylanιine
Figure imgf000256_0002
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 4.847 min. ! H-NMR (DMSO-d6): δ 8.07 (s, IH), 7.03 (m, IH), 6.60 (s, 2H), 6.20 (in, IH), 5.29 (s, 2H), 3.72 (s, 3H), 2.24 (s, 3H), 2.17 (s, 3H). Example 26. 4-Bromo-7-(3,5-dimethoxy-benzyl)-7H-pyrrolo [2,3-d]pyrimidin-2- ylamine
Figure imgf000257_0001
The title compound was obtained by alkylation of 4-bromo-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-cloromethyl-3,5-dimethoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.490 min. Η-NMR (CDC13): δ 7.20 (m, IH), 6.70 (s, 2H), 6.40 (s, IH), 6.34 (s, 2H), 6.23 (m, IH), 5.16 (s, 2H), 3.69 (s, 6H).
Example 27. 4-Chloro-7-(3-methoxy-benzyl)-7H-pyrrolo[2,3-d]pyrimidin-2- ylamine
Figure imgf000257_0002
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-chloromethyl-3-methoxy-benzene according to the general procedure 1.3. HPLC Rt: 7.177 min. 1H-NMR (DMSO-d6): δ 7.26-7.18 (m, 2H), 6.82- 6.80 (m, IH), 6.67 (s, IH), 6.70-6.67 (m, 3H), 6.32-6.30 (m, IH), 5.20 (s, 2H), 3.68 (s, 3H).
Example 28. 4-Chloro-7-(4-methoxy-benzyl)-7H-pyrrolo[2,3-d]pyrimidin-2- ylamine
Figure imgf000257_0003
The title compound was obtained by alkylation of 4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine with l-chloromethyl-4-methoxy-benzene according to the general procedure 1.3. HPLC Rt: 6.889 min. 'H-NMR (DMSO-d6): δ 7.19-7.16 (m, 3H), 6.90- 6.88 (m, 2H), 6.69 (s, 2H), 6.32-6.30 (m, IH), 5.18 (s, 2H), 3.71 (s, 3H).
Example 29. N-[4-Chloro-5-iodo-7-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2- ylmethyl)-7H-pyrrolo [2,3-d] pyrimidin-2-yl] -2,2-dimethyl-propionamide
Figure imgf000258_0001
The title compound was obtained by alkylation of N-(4-chloro-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 6.812min. 'H-NMR (DMSO-d6): δ 10.20 (s, IH), 8.13(s, IH), 7.97 (s, IH), 5.50 (s, 2H), 3.72 (s, 3H), 2.50 (s, 3H), 2.16 (s, 3H), 1.22 (s, 9H).
Example 30. N-[7-(4-Bromo-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-4-chIoro-5- iodo-7H-pyrrolo[2,3-d]pyrimidin-2-yI]-2,2-dimethyl-propionamide
Figure imgf000258_0002
The title compound was obtained by alkylation of N-(4-chloro-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-bromo-2- chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 7.630 min. 'H-NMR (DMSO-d6): δ 10.21 (s, IH), 8.30(s, IH), 7.91 (s, IH), 5.59 (s, 2H), 2.72 (s, 3H), 2.28 (s, 3H), 1.22 (s, 9H). Example 31. N-[4-ChIoro-5-iodo-7-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)- 7H-pyrr olo [2,3-d] pyrimidin-2-yl] -2,2-dimethyl-pr opionamide
Figure imgf000259_0001
The title compound was obtained by alkylation of N-(4-chloro-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-2,2-dimethyl-propionamide (A. Gangjee, J. Med. Chem. 2003, 46, 591) with 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.627 min. 'H-NMR (DMSO-d6): δ 10.15 (s, IH), 8.05(s, IH), 7.73 (s, IH), 5.46 (s, 2H), 3.74 (s, 3H), 2.33 (s, 3H), 2.16 (s, 3H), 1.21 (s, 9H).
Example 32. N-[7-(4-Bromo-3,5-dimethyl-l-oxy-pyridin-2-yImethyl)-4-chIoro-7H- pyrroIo[2,3-d]pyrimidin-2-yl]-2,2-dimethyl-propionamide
Figure imgf000259_0002
The title compound was obtained by alkylation of N-(4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-bromo-2-chloromethyl-3,5- dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 6.806 min. 'H-NMR (DMSO-d6): δ 10.13 (s, IH), 8.30(s, IH), 7.74 (m, IH), 6.52 (m, 1 H), 5.62 (s, 2H), 2.73 (s, 3H), 2.28 (s, 3H), 1.23 (s, 9H).
Example 33. N-[4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyI)-7H- pyrrolo[2,3-d]pyrimidin-2-yl]-2,2-dimethyI-propionamide
Figure imgf000260_0001
The title compound was obtained by alkylation of N-(4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.087 min. "H- NMR (CDC13): δ 8.18 (s, IH), 8.13(s, IH), 7.18 (m, IH), 6.49 (m, 1 H), 5.50 (s, 2H), 3.72 (s, 3H), 2.26 (s, 3H), 2.22 (s, 3H), 1.34 (s, 9H).
Example 34. N-[4-Chloro-7-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-yImethyl)- 7H-pyrrolo [2,3-d] pyrimidin-2-yI] -2,2-dimethyl-propionamide
Figure imgf000260_0002
The title compound was obtained by alkylation of N-(4-chloτo-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 6.115 min. 'H-NMR (CDC13): δ 8.12 (s, IH), 8.02(s, IH), 7.93 (m, IH), 6.49 (ni, 1 H), 5.71 (s, 2H), 3.76 (s, 3H), 2.70 (s, 3H), 2.22 (s, 3H), 1.36 (s, 9H).
Example 35. N-[4-Chloro-7-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyl)-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl]-2,2-dimethyl-propionamide
Figure imgf000260_0003
The title compound was obtained by alkylation of N-(4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-chloro-2-chloromethyl-3 ,5- dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.761 min. "H- NMR (CDC13): δ 8.23 (s, IH), 8.1 l(s, IH), 7.15 (m, IH), 6.50 (m, 1 H), 5.71 (s, 2H), 2.43 (s, 3H), 2.33 (s, 3H), 1.35 (s, 9H).
Example 36. N-[4-Chloro-7-(4-chloro-3,5-dimethyl-pyridin-2-yImethyl)-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl]-2,2-dimethyl-propionamide
Figure imgf000261_0001
The title compound was obtained by alkylation of N-(4-chloro-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-chloro-2-chloromethyl- 3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 7.508 min. *H- NMR (CDC13): δ 8.17 (s, IH), 8.11 (s, IH), 8.07 (s, IH), 5.77 (s, 2H), 2.81 (s, 3H), 2.33 (s, 3H), 1.37 (s, 9H).
Example 37. N-[4-Chloro-7-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-7H- pyrrolo [2,3-d] pyrimidin-2-yl] -2,2-dimethyl-propionamide
Figure imgf000261_0002
The title compound was obtained by alkylation of N-(4-chloro-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-chloro-2-chloromethyl-3 ,5- dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 6.688 min. 'H-NMR (CDC13): δ 8.15 (s, IH), 8.09 (s, IH), 7.87 (m, IH), 6.47 (m, IH), 5.77 (s, 2H), 2.84 (s, 3H), 2.31 (s, 3H), 1.37 (s, 9H). Example 38. N-[4-Chloro-7-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-5- iodo-7H-pyrrolo[2,3-d]pyrimidin-2-yl]-2,2-dimethyI-propionamide
Figure imgf000262_0001
The title compound was obtained by alkylation of N-(4-chloro-5-iodo-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-2,2-dimethyl-propionamide with 4-chloro-2-clιloromethyl- 3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 7.619 min. -NMR (CDC13): δ 8.25 (s, IH), 8.13 (s, IH), 7.33 (s, IH), 5.55 (s, 2H), 2.47 (s, 3H), 2.36 (s, 3H), 1.36 (s, 9H).
Example 39. 4-Chloro-5-[(dibenzyIamino)-methyl]-7-(4-methoxy-3,5-dimethyI- pyridin-2-ylmethyl)-7H-pyrrolo [2,3-d] pyrimidin-2-ylamine
Figure imgf000262_0002
Step2
Figure imgf000262_0003
Step 1. Octanoic acid {4-chloro-5-[(dibenzykmino)-methyl]-7H- pyrrolo [2,3 -d]pyrimidin-2-yl } -amide A solution of octanoic acid {5-[(dibenzykmino)-methyl]-4-oxo-4,7-dihydro-3H- pyrrolo[2,3-d]pyrimidin-2-yl} -amide (1.0 g, 2 mmol; J. Chem. Soc. Perkin Trans. 1 1998, 1637), BnNEt3Cl (1.4 g, 4 mmol), PhNMe2 (0.5 mL) and POCl3 (1.73 mL, 12 mmol) in CH3CN (9.2 mL) was heated to 100 °C for 40 min and concentrated. The residue was poured into ice water and neutralized with 2N NaOH, extracted with EtOAc (50 mL x3), and evaporated, to give the title compound (0.80 g, 76%). HPLC Rt: 6.868 min. 'H-NMR (DMSO-d6): δ 12.19 (s, IH), 10.49 (s, IH), 1.45-7.21 (m, 11H), 3.80 (s, 2H), 3.59 (s, 4H), 2.41 (t, 2H), 1,56 (m, 2H), 1.27 (br s 8H), 0.85 (t, 3H). Step 2. 4-Chloro-5-[(dibenzykmino)-methyl]-7-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-2-ylamine A suspension of octanoic acid {4-chloro-5-[(dibenzykmino)-methyl]-7H- pyrrolo[2,3-d]pyrimidin-2-yl}-amide (150 mg, 0.30 mmol), 2-chloromethyl-4-methoxy- 3,5-dimethyl-pyridine (56 mg, 0.30 mmol) and K2C03 (84 mg, 0.60 mmol) in dry DMF (1 mL) was heated to 45 °C for overnight. After work-up (EtOAc) and evaporation, the residue was taken up in methanolic 4N HC1 (1 mL), stirred at room temperature for 1 h, and neutralized to pH 7 with 2N NaOH. Extraction with EtOAc ( 10 mL x3), evaporation and purification by preparative TLC (MeOH/CH2Cl2 10: 1) gave the title compound ( 70.5 mg, 45%). HPLC Rt: 5.362 min. 'H-NMR (DMSO-d6): δ 8.05 (s, IH), 7.30-7.22 (m, 10H), 6.99(s, IH), 6.5Js, 2H), 5.27 (s 2H), 3.70 (s, 2H), 3.65 (s, 3H), 3.54 (s, 4H), 2.17 (s, 3H), 2.15 (s, 3H).
Example 40. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5- phenylaminomethyl-7H-pyrrolo [2,3-d] pyrimidin-2-ylamine
Stepl 90C, neat
Figure imgf000263_0001
Figure imgf000263_0002
Figure imgf000263_0003
Figure imgf000263_0004
Step 2c HC1, MeOH Step 1. Octanoic acid (4-chloro-5-phenylaminomethyl-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-amide A solution of octanoic acid {5-[(dibenzykmino)-methyl]-4-oxo-4,7-dihydro-3H- pyrrolo[2,3-d]pyrimidin-2-yl}-amide (2.42 g, 3 mmol) and aniline (10 mL) was heated to 90 °C in a selaed tube overnight, concentrated, filtered, and washed with MeOH (2 mL x3) to give the title compound (1.1 g, 57% ). HPLC Rt: 6.327 min. 'H-NMR (DMSO-d6): δ 11.77 (s, IH), 11.47 (s, IH), 11.37 (s, IH), 7.05 (m, 2H), 6.85 (s, IH), 6.62 (m, 2H), 6.52 (m, IH), 5.58 (t, IH), 4.31 (d, 2H), 2.43 (t, 2H), 1.58 (m, 2H), 1.27 (m, 8H), 0.86 (t, 3H). Step 2. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5- phenykminomethyl-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine A solution of octanoic acid (4-chloro-5-phenykminomethyl-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-amide (270 mg, 0.68 mmol), BnNEt3Cl (0.48 g, 1.36 mmol), PhNMe2 ( 0.17 mL) and POCl3 (0.59 mL, 4.08 mmol) in CH3CN (3 mL) was heated to 100 °C for 40 min and concentrated. The residue was poured into ice water and neutralized with 2N NaOH, extracted with EtOAc (20 mL x3), evaporated, to give 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine as a crude oil (282 mg) which was used without purification. A suspension of this crude (282 mg, 0.68 mmol), 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine (140 mg, 0.68 mmol) and Cs2C0 (266 mg, 0.68 mmol) in dry DMF (1 mL) was heated to 45 °C overnight, After work-up (EtOAc) and evaporation, the residue was taken up in methanolic 4N HC1 (1 mL), stirred at room temperature for 1 h, and neutralized to pH 7 with 2N NaOH. Extraction with EtOAc (10 mL x3), evaporation and purification by preparative TLC (MeOH/CH2Cl210:1) gave the title compound ( 4.8 mg, 1.6%). HPLC Rt: 4.785 min. 'H-NMR (CDC13): δ 8.12 (s, IH), 7.18(m, 2H), 6.75(m, 2H), 6.60 (s, IH), 5.26(s, 2H), 4.93 (s, 2H), 4.74 (s, 2H), 3.70 (s, 3H), 3.00 (s, 3H), 2.23 (s, 3H), 2.16 (s, 3H). Example 41. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-yImethyl)-5-[(methyl- phenyl-amino)-methyl]-7H-pyrrolo[2,3-d]pyrimidin-2-ylamine Stepl AS SOC, neat
Figure imgf000265_0001
Figure imgf000265_0002
Figure imgf000265_0003
Step 2o HCl, MeOH
Step 1: Octanoic acid (4-chloro-5-[(methyl-phenyl-amino)-methyl]-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-amide The title compound was obtained by treating octanoic acid {5-[(dibenzykmino)- methyl]-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-2-yl}-amide (2.42 g, 3 mmol) and N-methykniline (10 mL) as in step 1 of the previous example. HPLC Rt: 6.325 min. 'H-NMR (DMSO-d6): δ 11.73 (s, IH), 11.47 (s, IH), 11.35 (s, IH), 7.13 (m, 2H), 6.78 (s, 2H), 6.60 (m, 2H), 4.64(s, 2H), 2.98 (s, 3H), 2.43 (t, 2H), 1.58 (m, 2H), 1.27 (m, 8H), 0.86 (t, 3H). Step 2: 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5- [(methyl-phenyl-amino)-methyl]-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine The title compound was obtained by alkylation of octanoic acid {4-chloro-5- [(methyl-phenyl-amino)-methyl]-7H-pyrrolo[2,3-d]pyrimidin-2-yl}-amide with 2- chloromethyl-4-methoxy-3,5-dimethyl-pyridine and deprotection with 4N HCl as in step 2 of the previous example. HPLC Rt: 4.844 min. *H-NMR (CDC13): δ 8.20 (s, IH), 7.16 ( m, 2H), 6.87 (s, IH), 6.70-6.64 (m, 2H), 5.28 (s, 2H), 5.13 (s, 2H), 4.46 (s, 2H), 4.15 ( br s, IH), 3.73 (s, 3H), 2.25 (s, 3H), 2.18 (s, 3H). Example 42. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-6- pyrroIidin-l-ylmethyl-7H-pyrrolo[2,3-d]pyrimidin-2-yIamine
Figure imgf000266_0001
DMF, K2C03 then 6N HCl, MeOH
Step 1. Octanoic acid (4-chloro-6-pyrrolidin-l-ylmethyl-7H-pyrrolo[2,3- d]pyrimidin-2-yl)-amide A solution of octanoic acid (4-oxo-6-pyπolidin-l-ylmethyl-4,7-dihydro-3H- pyrrolo[2,3-d]pyrimidin-2-yl)-amide (0.36 g 1 mmol; J. Chem. Soc. Perkin Trans. 1 1998, 1637), BnNEt3Cl (0.70 g, 2 mmol), PhNMe2 (0.25 mL) and POCl3 (0.86 mL, 6 mmol) in CH3CN (5 mL) was heated to 100 °C for 40 min and concentrated. The residue was poured into ice water and neutralized with 2N NaOH, extracted with EtOAc (50 mL x3), and evaporated to give octanoic acid (4-chloro-6-pyrrolidin-l-ylmethyl-7H- pyrrolo[2,3-d]pyrimidin-2-yl)-amide as a crude (0.33 g) which was used without purification. HPLC Rt: 6.737 min. 'H-NMR (CDC13): δ 11.60 (br s, IH), 10.20 (br s, IH), 6.38 (s, IH), 3.86 (s, 2H), 2.90 (m, 2H), 2.70 9s, 4H), 1.86 (s, 4H), 1.78 (t, 2H), 1.32-1.29 (m, 8H), 0.90 (t, 3H). Step 2. 4-Chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-6- pyrrolidin-l-ylmethyl-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine A suspension of the crude octanoic acid (4-chloro-6-pyrrolidin-l-ylmethyl-7H- pyπolo[2,3-d]pyrimidin-2-yl)-amide (330 mg, 0.87 mmol), 2-chloromethyl-4-methoxy- 3,5-dimethyl-pyridine (162 mg, 0.87 mmol) and K2C03 (121 mg, 0.87 mmol) in dry
DMF (1 mL) was heated to 45 °C for overnight. After work-up (EtOAc) and evaporation, the residue was taken up in 6N methanolic HCl (1 mL), stirred at room temperature for 1 h, and neutralized to pH 7 with 2N NaOH. Extraction with EtOAc (10 mL x3), evaporation and purification by preparative TLC (MeOH/CH2Cl210:1) yielded 4-chloro- 7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-6-pyrrolidin-l-ylmethyl-7H- pyrrolo[2,3-d]pyrimidin-2-ykmine (4.1 mg , yield 1.0 %). HPLC Rt: 6.092 min. H- NMR (CDCI3): δ 8.09 (s, IH), 6.3 l(s, IH), 5.55(s, 2H), 4.85(s, 2H), 3.77 (s, 3H), 3.52(brs, 2H), 2.43 (m, 4H), 1.76-1.71(m, 4H).
Example 43. 4-Chloro-5-isopropyl-7-(4-methoxy-3,5-dimethyl-pyridin-2-yImethyl)- 7H-pyrrolo [2,3-d] pyrimidin-2-ylamine
Ste l Step 2
Figure imgf000267_0001
Step3 Ac20; POC13 ; HC1
Figure imgf000267_0002
Stepl. 3-Bromo-4-methyl-pentanal A mixture of 4-methyl-pentanal (8.60 g, 0.10 mol) , 5,5-dibromobarbituric acid (DBBA, 17.15 g, 0.06 mol), 40% HBr (2 mL) and HOAc (1 mL) in CH2C12 (180 mL) was stirred at 25 °C for 5 h. after filtration, the filtrate was washed with IN Na S03, Na2C03, and brine, dried with Na2S04, and evaporated to give 3-bromo-4-methyl- pentanal (8.76 g, 53%). 'H-NMR (CDCI3): δ 9.40 (s, IH), 4.40 (t, IH), 2.10 (m, IH), 1.06 (s, 3H), 1.05 (s, 3H). Step2. 2-Amino-5-isopropyl-3,7-dihydro-pyrrolo[2,3-d]pyrimidin-4-one A suspension of 4-diamino-6-hydroxypyrimidine (6.68 g, 50 mmol), AcONa (8.3 g 100 mmol) and 3-bromo-4-methyl-pentanal (8.76 g, 50 mmol) in CH3CN (100 mL) and H20 (100 mL) was stirred at 25 °C overnight whereupon the starting materials gradually dissolved and the desired pyrrolo[2,3-d]pyrimidine precipitated. The precipitate was collected by filtration and washed with MeOH to give 2-amino-5- isopropyl-3,7-dihydro-pyrrolo[2,3-d]pyrimidin-4-one (3.80 g, 40%). HPLC Rt: 4.408 min. 'H-NMR (DMSO-d6): δ 10.58 (s, IH), 10.10 (s, IH), 6.30 (s, IH), 5.97 (s, 2H), 3.03 (7, IH), 1.20 (s, 3H), 1.19 (s, 3H). Step 3. 4-Chloro-5-isopropyl-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine A mixture of 2-amino-5-isopropyl-3,7-dihydro-pyrrolo[2,3-d]pyrimidin-4-one and acetic anhydride (20 mL) was heated to reflux for 3 h and evaporated. The residue was treated with BnNEt3Cl (8.99 g, 40 mmol), PhNMe2 ( 4.9 mL) and POCl3 (17 mL, 120 mmol) in CH3CN (100 mL) at 100 °C for 40 min and concentrated. The residue was poured into ice water and neutralized with 2N NaOH, extracted with EtOAc (80 mL x 3), and evaporated to give an oil which was digested with methanolic 4N HCl (50 L) at 50 °C for 2 h. After cooling, and neutralization to pH 7 with 2N NaOH, the solid was collected by filtration and dried to give 4-chloro-5-isopropyl-7H-pyrrolo[2,3- d]pyrimidin-2-ykmine (1.88 g, 45%). HPLC Rt: 5.796 min. 'H-NMR (DMSO-d6): δ 11.170 (s, IH), 6.82 (s, IH), 6.42 (s, 2H), 3.24 (7, IH), 1.25 (s, 3H), 1.23 (s, 3H). Step 4. 4-Chloro-5-isopropyl-7-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine A suspension of 4-chloro-5-isopropyl-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine (105 mg, 0.5 mmol), 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine (93 mg, 0.5 mmol) and K2C03 (85 mg, 0.6 mmol) in dry DMF (1 mL) was heated to 45 °C overnight, Work-up (EtOAc), evaporation, and purification by preparative TLC ( MeOH CH2Cl2 10: 1) gave 4-chloro-5-isopropyl-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H- pyrrolo[2,3-d]pyrimidin-2-ykmine (36 mg). HPLC Rt: 5.867 min. 'H-NMR (DMSO- d6): δ 8.07 (s, IH), 6.74(s, IH), 6.51(s, 2H), 5.22 (s, 2H), 3.70 0s, 3H), 3.23 (7, IH), 2.21 (s, 3H), 2.15 (s, 3H). Example 44. 4-chloro-7-(4-chloro-3-methyI-pyridin-2-ylmethyl)-5-isopropyl-7H- pyrr olo [2,3-d] pyrimidin-2-ylamine
Figure imgf000269_0001
The title compound was obtained by alkylation of 4-chloro-5-isopropyl-7H- pyrrolo[2,3-d]pyrimidin-2-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 6.997 min. 'H-NMR (CDC13): δ 8.27 (s, IH), 6.61 (s, IH), 5.33 (s, 2H), 5.09 (s, 2H), 3.35 (7, IH), 2.35 (s, 6H), 1.25 (s, 3H), 1.23 (s, 3H).
Example 45. 4-Chloro-7-(4-chloro-3-methyl-l-oxy-pyridin-2-ylmethyl)-5-isopropyl- 7H-pyrrolo[2,3-d]pyrimidin-2-ylamine
Figure imgf000269_0002
The title compound was obtained by alkylation of 4-chloro-5-isopropyl-7H- pyrrolo[2,3-d]pyrimidin-2-ykmine with 2-chloromethyl-3,5-dimethyl-pyridine 1-oxide according to the general procedure 1.3. HPLC Rt: 6.753 min. 'H-NMR (DMSO-d6): δ 8.37 (s, IH), 7.03 (s, IH), 6.63 (s, 2H), 5.40 (s, 2H), 3.20 (7, IH), 2.59 (s, 3H), 2.27 (s, 3H), 1.20 (s, 3H), 1.19 (s, 3H). Example 46. 4-Chloro-5-(2-isobutylamino-ethyl)-7-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-7H-pyrrolo [2,3-d] pyrimidin-2-ylamine uP 2
tBuPh2
Figure imgf000270_0001
ιSte 7 7. 4-(tert-Butyl-diphenyl-siknyloxy)-butan-l-ol A mixture of ffiuPh2SiCl (25 mL, 98 mmol), 1,4-butanediol (25 mL, 281 mmol), iPrNEt2 (50 mL, 303 mmol) and CH2C12 (50 mL) was stirred atrt for 14 h, concentrated, diluted with diethyl ether, washed with water (3 x) and brine. Drying (Na2S04) and concentration afforded the title compound as a clear oil (29.8 g, 93%) which was used without further purification. Rf (EtOAc:hexane 1 :4) 0.3. Η-NMR (CDCI3): δ 7.71 (dd, 4H), 7.43 (m, 6H), 3.74 (t, 2H), 3.70 (q, 2H), 2.10 (br. t, IH), 1.69 (m, 4H), 1.08 (s, 9H). Step 2. 4-(tert-Butyl-diphenyl-siknyloxy)-butyraldehyde A solution of 4-(tert-butyl-diphenyl-silanyloxy)-butan-l-ol (29.8 g, 91 mmol) in CH2C12 (70 mL) was added to a slurry of PCC (21.5 g, 100 mmol), celite (50 g) and CH2C12 (300 mL). The mixture was stirred for 2 h at rt, and the celite was removed by filtration and washed with CH2C12 (300 mL). Concentration and chromatography (EtOAc/hexane 1:4) afforded the title compound as a clear oil (22.2 g, 75%). Rf (EtOAc:hexane 1:4) 0.7. 'H-NMR (CDC13): δ 9.82 (t, IH), 7.68 (dd, 4H), 7.41 (m, 6H), 3.71 (t, 2H), 2.57 (t, 2H), 1.91 (q, 2H), 1.07 (s, 9H). Step 3. 2-Bromo-4-(tert-butyl-diphenyl-siknyloxy)-butyraldehyde A mixture of 4-(tert-butyl-diphenyl-siknyloxy)-butyraldehyde (22.2 g, 68 mmol), 5,5-dibromobarbituric acid (12.1 g, 43 mmol) and CH2C12 (80 mL) was treated with 70% aq HBr (1 mL, 14 mmol) and stirred at rt for 1 h. The by-product (barbituric acid) was removed by filtration and washed with CH2C12 (100 mL). The combined organic layers were washed (lNNa2S203, 5% NaHC03, half-sat. brine) and dried (Na2S04). Concentration gave the title compound as a clear oil (25.3 g, 92%) which was used without further purification. Rf (EtOAc:hexane 1 :4) 0.7. 'H-NMR (CDC13): δ 9.55 (d, IH), 7.68 (dd, 4H), 7.41 (m, 6H), 4.60 (ddd, IH), 3.84 (m, 2H), 2.35 (m, IH), 2.10 (m, IH), 1.07 (s, 9H). Step 4. 2-Amino-5-[2-(tert-butyl-diphenyl-silanyloxy)-ethyl]-3,7- dihydro-pyrrolo[2,3-d]pyrimidin-4-one The title compound was obtained by treating 2-bromo-4-(tert-butyl-diphenyl- siknyloxy)-butyraldehyde (25. 3 g, 62 mmol) with 2,4-diamino-6-hydroxypyrimidine (10.2 g, 124 mmol) according to the general procedure 1.1 (23.4 g, 87%). HPLC Rt: 6.981 min. 'H-NMR (CDC13): δ 10.67 (s, IH), 10.14 (s, IH), 7.55 (m, 4H), 7.38 (m, 6H), 6.37 (s, IH), 5.98 (s, 2H), 3.86 (t, 2H), 2.86 (t, 2H), 0.95 (s, 9H). Step 5. N-{7-Acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4-oxo- 4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide A solution of 2-amino-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-3,7-dihydro- pyrrolo[2,3-d]pyrimidin-4-one (22.7 g, 52 mmol) in Ac20 (200 mL) was heated to 110 °C for 2.5 h, concentratedjdiluted with toluene (300 mL) and concentrated again to afford the title compound to afford the title compound as a crude brown oil (27 g) which was used without further purification. An aliquot was purified by chromatography for characterization. HPLC Rt: 8.349 min. 'H-NMR (CDCI3): δ 11.77 (s, IH), 8.81 (s, IH), 7.61 (dd, 4H), 7.30 (m, 7H), 6.37 (s, IH), 4.00 (t, 2H), 3.02 (t, 2H), 2.70 (s, 3H), 2.23 (s, 3H), 1.04 (s, 9H). Step 6. N- {7-Acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4- chloro-7H-pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide A solution of crude N-{7-acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4- oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide (26.4 g, 51 mmol), BnNEt3Cl (23.2 g, 102 mmol), PhNMe2 (19.6 mL, 153 mmol) and POCl3 (9.3 mL, 77 mmol) in CH3CN (100 mL) was heated to 80 °C for 1.5 h. The mixture was diluted with EtOAc (800 mL), washed (sat. NaHC03, brine) and concentrated to afford the title compound as an oil (46 g) which was used without further purification. An aliquot was purified by chromatography for characterization. HPLC Rt: 8.562 min. 'H-NMR (CDC13): δ 8.05 (s, IH), 7.68 (s, IH), 7.57 (dd, 4H), 7.40 (m, 6H), 3.99 (t, 2H), 3.06 (t, 2H), 2.98 (s, 3H), 2.52 (s, 3H), 1.04 (s, 9H). Step 7. N- {5-[2-(tert-Butyl-diρhenyl-siknyloxy)-ethyl]-4-chloro-7H- pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide A solution of crude N-{7-acetyl-5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4- chloro-7H-pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide (46 g) in MeOH (150 mL) was treated with K2C03 (8.0 g, 58 mmol) at rt for 15 min. Filtration, concentration, and chromatography (EtOAc/hexane 1:1) afforded the title compound as an oil contaminated with residual PhNMe2 from step 6. The oil was diluted with EtOAc (40 mL) and treated with hexane (40 mL) to obtained the desired product as a pale yellow precipitate (4.2 g, 16% over 3 steps). HPLC Rt: 8.558 min. !H-NMR (CDC13): δ 11.75 (br. s, IH), 11.35 (br. s, IH), 7.60 (dd, 4H), 7.37 (m, 6H), 3.97 (t, 2H), 3.10 (t, 2H), 2.57 (s, 3H), 1.06 (s, 9H). Step 8. N-[5-[2-(tert-Butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin- 2-yι]-acetamide A mixture ofN-{5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7H- pyrrolo[2,3-d]pyrimidin-2-yl}-acetamide (344 mg, 0.70 mmol), 2-chloromethyl-4- methoxy-3,5-dimethyl-pyridine hydrochloride (175 mg, 0.77 mmol), K2C03 (516 mg, 3.7 mmol) and DMF (3.0 mL) was stirred at rt overnight. Work-up (EtO Ac/water; brine) afforded the title compound as an off-white solid which was used without further purification (516 mg, "115%"). HPLC Rt: 8.419 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 7.95 (s, IH), 7.55 (dd, 4H), 7.32 (m, 6H), 7.04 (s, IH), 5.37 (s, 2H), 3.91 (t, 2H), 3.73 (s, 3H), 3.06 (t, 2H), 2.57 (s, 3H), 2.26 (s, 3H), 2.25 (s, 3H), 0.97 (s, 9H). Step 9. 5-[2-(tert-Butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin- 2-ykmine A solution of N-[5-[2-(tert-Butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-2-yl]-acetamide (511 mg) in THF (3 mL) and MeOH (3 mL) was treated with NaOH 2M (3 mL) at 45 °C for 1.5 h. Work-up and chromatography (EtOAc/hexane 1:1) afforded the title compound as a white powder (290 mg, 69% over 2 steps). HPLC Rt: 8.198 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 7.57 (dd, 4H), 7.40 (m, 2H), 7.32 (m, 4H), 6.69 (s, IH), 5.26 (s, 2H), 4.90 (s, 2H), 3.98 (t, 2H), 3.66 (s, 3H), 3.00 (t, 2H), 2.24 (s, 3H), 2.18 (s, 3H), 0.96 (s, 9H). Step 10. 2-[2-Amino-4-chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-ethanol A solution of 5-[2-(tert-butyl-diphenyl-siknyloxy)-ethyl]-4-chloro-7-(4-methoxy-
3,5-dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-2-ylamine (246 mg, 0.41 mmol) in THF (5 mL) was treated with TBAF (IN in THF, 0.5 mL, 0.50 mmol) at rt for 1 h. Work-up (EtO Ac/water, brine) gave the crude product as an oil, which was diluted with diethyl ether (15 mL) whereupon the desired product precipitated out of solution as a white powder (110 mg, 74%). HPLC Rt: 4.474 min. 'H-NMR (CDC13): δ 8.21 (s, IH), 6.78 (s, IH), 5.30 (s, 2H), 4.93 (s, 2H), 3.87 (t, 2H), 3.76 (s, 3H), 3.03 (t, 2H), 2.26 (s, 3H), 2.23 (s, 3H). Step 11. Methanesulfonic acid 2-[2-amino-4-chloro-7-(4-methoxy-3,5- ,dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-ethyl ester A solution of 2-[2-amino-4-chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-ethanol (11.6 mg, 0.031 mmol) and Et3N (30 ul, 0.22 mmol) in THF (2 mL) was treated with MsCl (11 uL, 0.14 mmol) at rt for 15 min to give a solution of the title compound which was used without further purification. In a separate experiment, the material was purified by preparative TLC (EtOAc 100%). HPLC Rt: 4.765 min. Η-NMR (CDC13): δ 8.22 (s, IH), 6.80 (s, IH), 5.31 (s, 2H), 4.93 (s, 2H), 4.42 (t, 2H), 3.77 (s, 3H), 2.98 (t, 2H), 2.85 (s, 3H), 2.23 (s, 3H), 2.07 (s, 3H). Step 12. 4-Chloro-5-(2-isobutykmino-ethyl)-7-(4-methoxy-3 ,5-dimethyl- pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-2-ykmine The solution of methanesulfonic acid 2-[2-amino-4-chloro-7-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]-ethyl ester in THF obtained from step 11 was diluted with i-BuNH2 (4 mL) and heated to 50 °C for 15 h. Concentration, work-up(EtOAc/NaHC03 sat.; brine) and preparative TLC (MeOH:Et3N:CH2Cl27:3:100) gave the title compound as a colorless oil (6 mg, 50 %). HPLC Rt: 4.263 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 6.79 (s, IH), 5.29 (s, 2H), 4.97 (s, 2H), 3.76 (s, 3H), 3.04 (t, 2H), 2.96 (t, 2H), 2.53 (d, 2H), 2.26 (s, 3H), 2.22 (s, 3H), 1.85 (oct., lH), 0.90 (d, 6H).
Example 47. 2-Amino-4-chloro-7-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)-5,7- dihy dro-pyrrolo [2,3-d] pyrimidin-6-one
Figure imgf000274_0001
The title compound was obtained by condensation between (2-amino-4,6- dichloro-pyrimidin-5-yl)-acetic acid ethyl ester and C-(4-methoxy-3,5-dimethyl-pyridin- 2-yl)-methykmine according to the general procedure 1.2. HPLC Rt: 4.893 min.'H- NMR (CDC13): δ 8.07 (s, IH), 5.03 (s, 2H), 4.92 (s, 2H), 3.77 (s, 3H), 3.57 (s, 2H), 2.31 (s, 3H), 2.20 (s, 3H). Example 48. 2-Ammo-4-chloro-7-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyl)-5,7- dihydro-pyrrolo [2,3-d] pyrimidin-6-one
Figure imgf000275_0001
The title compound was obtained by alkylation of 4-chloro-pyrrolo[2,3- d]pyrimidin-6-one with 2-chloromethyl-4-chloro-3,5-dimethyl-pyridine according to the general procedure 1.3. HPLC Rt: 5.367 min.'H-NMR (CDC13): δ 8.09 (s, IH), 5.02 (s, 2H), 4.96 (s, 2H), 3.57 (s, 2H), 2.45 (s, 3H), 2.29 (s, 3H).
Example 49. 2-Amino-4-chloro-7-(3,5-dimethyl-4-methoxy-l-oxy-pyridin-2- ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000275_0002
The title compound was obtained by oxidation of 2-amino-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with m-CPBA according to the general procedure 2.1. HPLC Rt: 4.763 min.'H-NMR (DMSO-d6): δ 8.01 (s, IH), 7.01 (s, 2H), 4.93 (s, 2H), 3.73 (s, 3H), 3.46 (s, 2H), 2.40 (s, 3H), 2.19 (s, 3H).
Example 50. 2-Amino-4-chloro-7-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2- ylmethyI)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000275_0003
The title compound was obtained by oxidation of 2-amino-4-chloro-7-(4-chloro- 3,5-dimethyl-pyridin-2-ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one withm- CPBA according to the general procedure 2.1. HPLC Rt: 4.90 min.'H-NMR (CDC13/CD30D): δ 7.96 (s, IH), 5.12 (s, 2H), 3.38 (s, 2H), 2.47 (s, 3H), 2.27 (s, 3H).
Example 51. 2-Amino-4-chloro-7-(3,4,5-trimethoxy-benzyϊ)-5,7-dihydro- pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000276_0001
The title compound was obtained by condensation between (2-Amino-4,6- dichloro-pyrimidin-5-yι)-acetic acid ethyl ester and 3,4,5-Trimethoxy-benzykmine according to the general procedure 1.2. HPLC Rt: 6.391 min.'H-NMR (CDC13): δ 6.70 (s, 2H), 5.14 (s, 2H), 4.77 (s, 2H), 3.84 (s, 6H), 3.81 (s, 3H), 3.47 (s, 2H).
Example 52. 2-Amino-4-chloro-7-(2-bromo-3,4,5-trimethoxy-benzyl)-5,7-dihydro- pyrroIo[2,3-d]pyrimidin-6-one
Figure imgf000276_0002
The title compound was obtained by treating 2-amino-4-chloro-7-(3,4,5- trimethoxy-benzyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with bromine in acetic acid according to the general procedure 3.1. HPLC Rt: 7.150 min.'H-NMR (CDC13): δ 6.49 (s, IH), 5.14 (s, 2H), 4.94 (s, 2H), 3.90 (s, 3H), 3.86 (s, 3H), 3.75 (s, 3H), 3.55 (s, 2H). Example 53. 2-Amino-4-chloro-7-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5- methyl-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000277_0001
The title compound was obtained by alkylation of 2-amino-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with iodomethane according to the general procedure 1.5. HPLC Rt: 4.091 min.'H-NMR (CDC13): δ 8.01 (s, IH), 5.15 (s, 2H), 4.93 (d, IH), 4.87 (d, IH), 3.76 (s, 3H), 3.51 (s, IH), 2.29 (s, 3H), 2.20 (s, 3H), 1.78 (s, 3H).
Example 54. 2-Amino-4-chloro-7-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyI)-5,5- dimethyl-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000277_0002
The title compound was obtained by alkylation of 2-amino-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with iodomethane according to the general procedure 1.5. HPLC Rt: 5.002 min.'H-NMR (CDC13): δ 8.02 (s, IH), 5.02 (s, 2H), 4.90 (s, 2H), 3.75 (s, 3H), 2.29 (s, 3H), 2.18 (s, 3H), 1.53 (s, 6H).
Example 55. 2-Amino-4-chIoro-7-(2-bromo-3,4,5-trimethoxy-benzyl)-5,5-dimethyl- 5,7-dihydro-pyrrolo [2,3-d] pyrimidin-6-one
Figure imgf000278_0001
The title compound was obtained by alkylation of 2-amino-4-chloro-7-(3,4,5- trimethoxy-benzyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with iodomethane according to the general procedure 1.5. HPLC Rt: 6.944 min.'H-NMR (CDC13): δ 6.34 (s, IH), 5.09 (s, 2H), 4.93 (s, 2H), 3.90 (s, 3H), 3.86 (s, 3H), 3.71 (s, 3H), 1.52 (s, 6H).
Example 56. 4-Chloro-5-hydroxy-2-imino-7-(4-methoxy-3,5-dimethyl-pyridin-2- yImethyl)-2,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one
Figure imgf000278_0002
The title compound was obtained by oxidation of 2-amino-4-chloro-7-(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with selenium dioxide according to the general procedure 1.6. HPLC Rt: 4.294 min.'H- NMR (CDC13): δ 8.04 (s, IH), 5.93 (s, IH), 5.76 (s, IH), 4.97 (s, 2H), 3.765 (s, 3H), 2.29 (s, 3H), 2.20 (s, 3H).
Example 57. 4-Chloro-5-hydroxy-2-imino-7-(3,4,5-trimethoxy-benzyl)-2,7-dihydro- pyr rolo [2,3-d] pyrimidin-6-one
Figure imgf000279_0001
The title compound was obtained by oxidation of 2-amino-4-chloro-7-(3,4,5- trimethoxy-benzyl)-5,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one with selenium dioxide according to the general procedure 1.6. HPLC Rt: 6.156 min.'H-NMR (CDC13): δ 6.68 (s, 2H), 6.12 (s, IH), 5.93 (s, IH), 4.84 (s, 2H), 3.86 (s, 6H), 3.83 (s, 3H).
Example 58. 4-Chloro-5-hydroxy-2-imino-7-(2-bromo-3,4,5-trimethoxy-benzyl)- 2,7-dihydro-pyrrolo [2,3-d] pyrimidin-6-one
Figure imgf000279_0002
The title compound was obtained by oxidation of 4-chloro-5-hydroxy-2-imino-7- (2-bromo-3,4,5-trimethoxy-benzyl)-2,7-dihydro-pyrrolo[2,3-d]pyrimidin-6-one according to the general procedure 1.6. HPLC Rt: 6.230 min.'H-NMR (CDC13): δ 6.57 (s, IH), 6.14 (s, IH), 5.91 (s, IH), 5.01 (s, 2H), 3.90 (s, 3H), 3.87 (s, 3H), 3.78.(s, 3H).
BIOLOGY EXAMPLES
Example A. rHSP90 Competitive Binding Assay Five microgram of purified rHSP90 protein (Stressgen, BC, Canada, #SPP-770) in phosphated buffered saline (PBS) was coated on 96 well plates by incubating overnight at 4°C. Unbound protein was removed and the coated wells were washed twice with 200 μL PBS. DMSO controls (considered as untreated samples) or test compounds were then added at 100-30-10-3-1-0.3 μM dilutions (in PBS), the plates mixed for 30 seconds on the plate shaker, and then incubated for 60 min. at 37 °C. The wells were washed twice with 200 μL PBS, and 10 μM biotinykted-geldanamycin (biotin-GM) was added and incubated for 60 min. at 37 °C. The wells were washed again twice with 200 μL PBS, before the addition of 20 μg/mL streptavidin- phycoerythrin (streptavidin-PE) (Molecular Probes, Eugene, OR) and incubation for 60 min. at 37°C. The wells were washed again twice with 200 μL PBS. Relative fluorescence units (RFU) was measured using a SpectraMax Gemini XS Spectiofluorometer (Molecular Devices, Sunnyvale, CA) with an excitation at 485 nm and emission at 580 nm; data was acquired using SOFTmax®PRO software (Molecular Devices Corporation, Sunnyvale, CA). The background was defined as the RFU generated from wells that were not coated with HSP90 but were treated with the biotin- GM and streptavidin-PE. The background measurements were substrated from each sample treated with biotin-GM and streptavidin-PE measurements before other computation. Percent inhibition of binding for each sample was calculated from the background subtracted values as follows: % binding inhibition = [RFU untreated - RFU treated]/RFU untreated] x 100.
Example B. Cell Lysate Binding Assay MCF7 breast carcinoma cell lysates were prepared by douncing in lysing buffer
(20 mM HEPES, pH 7.3, 1 mM EDTA, 5 mM MgCl2, 100 mM KCl), and then incubated with or without test compound for 30 mins at 4 °C, followed by incubation with biotin- GM linked to BioMag™ streptavidin magnetic beads (Qiagen) for 1 hr at 4 °C. The tubes were placed on a magnetic rack, and the unbound supernatant removed. The magnetic beads were washed three times in lysis buffer and boiled for 5 mins at 95 °C in SDS-PAGE sample buffer. Samples were analyzed on SDS protein gels, and Western blots done for rHSP90. Bands in the Western Blots were quantitated using the Bio-rad Fluor-S Multilmager, and the % inhibition of binding of rHSP90 to the biotin-GM was calculated. The lysate binding ability of selected compounds of the invention based on the above assay is summarized in Table 5. The IC50 reported is the concentration of test compound needed to achieve 50% inhibition of the biotin-GM binding to rHSP90 in the MCF7 cell lysates.
Example C. HER2 Degradation Assay MCF7 breast carcinoma cells (ATCC) were grown in Dulbecco's modified Eagle's medium (DMEM) containing 10% fetal bovine serum (FBS) and 10 mM HEPES, and plated in 24 well plates (50% confluent). Twenty-four hrs later (cells are 65-70% confluent), test compounds were added and incubated overnight for 16 h. For the less potent compounds, the amounts added were 100 μM, 30 μM, 10 μM and 1 uM, and for more potent compounds, the amounts added were 1 μM, 0.3 μM, 0.1 μM, 0.03 μM, 0.01 μM and 0.003 μM. The wells were washed with 1 mL phosphate buffered saline (PBS), and 200 μL trypsin was added to each well. After trypsinization was complete, 50 μL of FBS was added to each well. Then 200 μL cells was transferred to 96 well plates. The cells were pipetted up and down to obtain a single cell suspension. The plates were centrifuged at 2,500 rpm for 1 min using a Sorvall Legend RT™ tabletop centrifuge (Kendro Laboratory Products, Asheville, NC). The cells were then washed once in PBS containing 0.2% BSA and 0.2% sodium azide (BA buffer). Phycoerythrin (PE) conjugated anti HER2/Neu antibody (Becton Dickinson, #340552), or PE conjugated anti-keyhole limpet hemacyanin [KLH] (Becton Dickinson, #340761) control antibody was added at a dilution of 1 :20 and 1 :40 respectively (final concentration was 1 μg/mL) and the cells were pipeted up and down to form a single cell suspension, and incubated for 15 mins. The cells were washed twice with 200 μL BA buffer, and resuspended in 200 μL BA buffer, and transferred to FACSCAN tubes with an additional 250 μL BA buffer. Samples were analyzed using a FACSCalibur™ flow cytometer (Becton Dickinson, San Jose, CA) equipped with Argon-ion laser that emits 15 mW of 488 nm light for excitation of the PE fluorochrome. 10,000 events were collected per sample. A fluorescence histogram was generated and the mean fluorescence intensity (MFI) of each sample was determined using Cellquest software. The background was defined as the MFI generated from cells incubated with control IgG-PE, and was subtracted from each sample stained with the HER2/Neu antibody. Cells incubated with DMSO was always done as untreated controls since the compounds were resuspended in DMSO. Percent degradation of HER2 was calculated as follows: % HER2 degraded = [(MFI untreated cells - MFI treated cells)/MFl untreated cell] x 100 The HER2 degradation ability of selected compounds of the invention based on this assay is summarized in Table 5. IC50 is defined as the concentration at which there was 50% degradation of the HER2/Neu protein.
Example D: MTS Assay MTS assays measures the cytotoxicity of geldanamycin derivatives. MTS (3- (4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H- tetrazolium is a tetrazolium dye that is converted to a formazan product by dehydrogenase enzymes of metabolically active cells (Corey, A. et al. "Use of an aqueous soluble tetrazolium/formazan assay for cell growth assays in culture," Cancer Commun. 1991, 3, 207-212). Cells were seeded in 96 well plates at 2000 cells/well and allowed to adhere overnight in Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum. The final culture volume was 100 μl. Viable cell number was determined by using the Celltiter 96 AQue0us Non-radioactive Cell Proliferation Assay (Promega, Madison WI). The MTS /PMS (phenazine methosulfate) solution was mixed at a ratio of 20:1, and 20 μL was added per well to 100 μl of culture medium. After 2-4 hours, the formation of the formazan product was measured at 490 nm absorbance using a multiwell plate spectrophotometer. Background was determined by measuring the Abs 490 nm of cell culture medium and MTS-PMS in the absence of cells and was subtracted from all values. Percent viable cells was calculated as follows: % viable cells = (Abs at 490 nm treated cells / Abs at 490 nm untreated cells) x 100 The effect of selected compounds of the invention on MCF7 breast carcinoma cells according to the MTS assay is summarized in Table 5. IC50 was defined as the concentration of the compound which gave rise to 50% viable cell number. TABLE 5. Biological Activities of Pyrrolopyrimidines (Formula I)
Figure imgf000283_0001
Figure imgf000284_0001
Figure imgf000285_0001
Figure imgf000286_0001
ND, not determined.
II. PREPARATION OF AMINQPURINES AND RELATED ANALOGS (COMPOUNDS OF FORMULA II)
A. Materials and Methods The chemical reagents used to create the novel products of the invention below are all available commercially, e.g., from Aldrich Chemical Co., Milwaukee, WI, USA. Otherwise their preparation is facile and known to one of ordinary skill in the art, or it is referenced or described herein. The final compounds were usually purified by preparative TLC (silica gel 60 A, Whatman Partisil PK6F) or flash chromatography (silica gel 60 A, EMD Chemicals) using EtOAc/hexane or MeOH/CH2Cl2 as eluents. Rfs were measured using silica gel TLC plates (silica gel 60 A, EMD Chemicals). Analytical HPLC chromatograms were obtained using a C18 column (Agilent Zorbax 300SB-C18; 5 microns; 4.6 mm x 150 mm). A gradient was applied between solvent A (0.1 % TFA in H20) and solvent B (0.5% TFA in CH3CN) increasing the proportion of A linearly from 5% (t=0) to 100% (t=7.00 min), with a constant flow rate of 1 mL/min. The samples were diluted to typically 0.1-1 mg/mL in MeOH or CH3CN and the injection volumes were typically 10 μL. The column was not heated, and UV detection was effected at 254 nm. 'H-NMR spectra were recorded on a Bruker Avance 400 MHz spectrometer. The chemical names were generated using the Beilstein Autonom 2.1 software. B. General Procedure
1. General procedures to manipulate the purine ring General procedure 1.1: Alkylation of purines at N-9 A suspension of the purine (3 mmol), (hetero)aryl-CH2-halide (3 mmol, if needed it can be added in batches) and K2C03 (3.3 mmol) in dry DMF (15 mL) was heated to 40-60 °C for 3 to 10 h. Work-up (EtOAc) and purification by prepartive TLC or flash chromatography (EtOAc/hexane or MeOH/CH2Cl2) yielded the pure N-9 alkykted product. General procedure 1.2: Halogenation of purines at C-8 A solution of purine in MeOH/THF/acetate buffer (IN in each AcOH and AcONa) was treated with Br2 (1.3-equiv. IM in CHC13) at room termperture (r.t.) for 16 h. Evaporation, work-up (EtOAc), drying (MgS04) and flash chromatography afforded the desired 8-bromopurine. General procedure 1.3: Nucleophilic substitution of purines at C-6 For details, see J. Med. Chem. 1999, 42, 2064-2086. A) Sulfanyl derivatives: A suspension of 6-chloropurine and sodium or potassium thiokte in THF was heated to reflux for 6-24 hours. Work-up (EtOAc) and flash chromatography afforded the desired 6-sulfanylpurine. B) Alkoxy derivatives: A suspension of 6-chloropurine and alkoxide in the appropriate alcohol was heated to reflux for 1-16 hours before quenching with water. Evaporation, work-up (EtOAc), and flash chromatography afforded the desired 6- alkoxypurine. C) Amino derivatives: A solution of 6-chloropurine and alkylamine in MeOH was heated in a sealed tube to 100 °C for 16 hours. Evaporation, work-up (EtOAc), and flash chromatography afforded the desired 6-alkoxypurine. General procedure 1.4: Methyktion of purines at C-6 A suspension of 6-chloropurine (0.2 mmol) and tetrakis(triphenylphosphino)- palladium (0.02 mmol) in dry THF (3 mL) was treated with trimethykluminum (2M in toluene, 0.45 mmol) under nitrogen. The resulting solution was heated to reflux for 3 h, cooled to r.t., diluted with toluene (5 mL), and quenched with methanol (0.5 mL) followed by ammonium chloride (1 mmol). The mixture was heated to reflux for 2 h and filtered while hot through a Celite plug. Evaporation and purification by prep TLC afforded the 6-methylpurine. See J. Med. Chem. 1999, 42, 2064-2086. General procedure 1.5: Reductive dehalogenation of 6-halopurine The 6-halo purine derivative was dissolved in acetic acid and a catalytic amount of 5 % Pd/C was added, and the mixture stirred under H2 atmosphere (1 psi) at r.t. for Hi., evaporation, and purification afforded the dehalogenated derivatives. General procedure 1.6: Acetyktion of 2-amino-purines The 2-amino purine derivative was dissolved in acetic anhydride, treated with a catalytic amount of concentrated sulfuric acid at r.t. for 1 hour. Work-up (EtOAc), evaporation, and purification afforded the 2-acetamido-pyridine. 2. General procedures to manipulate the pyridine ring General procedure 2.1 : Preparation of pyridine N-oxides A solution of the pyridine derivative (1.0 mmol) in dichloromethane or chloroform (5 mL) was cooled by means of an ice-bath, treated with m-CPBA (1.1 to 3 mmol) in three portions, and allowed to warm to r.t. The mixture was extracted with dichloromethane and washed with aqueous NaOH, followed by water. Drying (Na2S04) and concentration afforded the pyridine N-oxide. General procedure 2.2: Preparation of 2-(acetoxymethyl)pyridines A solution of the 2-methyl pyridine N-oxide (1.0 mmol) in acetic anhydride (5 mmol) was heated to reflux for 0.5 h. Work-up (EtOAc), drying (MgS0 ), evaporation and purification by preparative TLC or flash chromatography afforded the 2-
(acetoxymethyl) pyridine. General procedure 2.3: Preparation of 2- (hydroxymethyl)pyridines A suspension of 2-acetoxymethyl-pyridine derivative and solid K2C03 in methanol was heated to 50 °C for 5-30 min. Evaporation, work-up (EtOAc), and drying (MgS0 ) afforded the 2-(hydroxymethyl)pyridine. General procedure 2.4: Preparation of 2-(chloromethyl)pyridines A suspension of 2-hydroxymethyl-pyridine (10 g) in POCl (30 mL) was stirred at 110 °C for 1.5 h. The resulting viscous oil was cooled to r.t. and poured onto ice water (500 g). The pH was adjusted to 10 with solid KOH. Work-up (CHC13), drying
(MgS04) and evaporation gave the 2-(chloromethyl)pyridine, usually as a purple oil or solid, which was used without purification. General procedure 2.5: Preparation of 2-(bromomethyl)pyridines A solution of 2-(hydroxymethyl)pyridine (1.0 mmol) and triphenyl phosphine (1.2 mmol) in dichloromethane or chloroform (5 mL) was cooled to 0 °C. A solution of CBr4 (1.5 mmol) in dichloromethane or chloroform was added dopwise, and the resulting mixture was stirred at 0 °C for 0.5-1 h. Work up followed and purification by flash chromatography afforded the 2-(bromomethyl)pyridine. General procedure 2.6: 0-alkyktion of 3- or 4-hydroxypyridines A mixture of hydroxypyridine, alkyl halide (1.1 equiv.), base (K2C03, KOH or
NaH 1.2-2 equiv.) and solvent (THF or DMF) was stirred at 23-80 °C for 5-30 min. Work-up (EtOAc), drying (Na2S04) and evaporation gave the crude 4-(alkoxy)pyridine, which was purified by preparative TLC or flash chromatography. General procedure 2.7: Preparation of salts. Method 1: The free base (40 mmol) was heated in MeOH (1 :6, 300 mL) until it dissolved. A solution of H3P04 in MeOH (40 mmol) was added dropwise at r.t. The mixture was stirred for 10 min., and the solvent was evaporated to give the pyridinium phosphate as a glassy white solid. The following solvents could also be used: THF, EtOH, or i-PrOH. Method 2: The free base (50 mmol) was heated in i-PrOH (6 L) until it dissolved. The solution was allowed to cool to r.t. and a solution of HCl in i-PrOH (75 mmol) was added slowly dropwise. The hydrochloride crystallized out of solution within a few minutes, and was collected by filtration, washed (acetone) and dried. The sulfate and mesykte salts were also prepared in this manner. The hydrochloride salts can also be made by adding CH3COCl to the alcoholic solution of the pyridine or free base derivative. Method 3: To a suspension of free base (5 mmol) in MeOH (50 mL) was added a solution of methane sulfonic acid in MeOH (75 mmol) was added slowly dropwise. The mixture became clear within a few minutes, upon addition of i-PrOH (50-100 mL) the salt precipitated out and was collected by filtration, washed with i-PrOH, ether and dried. These methods can be applied to prepare all other salts.
3. General procedure to manipulate benzene rings General procedure 3.1: Halogenation of benzene rings. Variant 1 : A solution of the aromatic compound in MeOH/THF/acetate buffer (IN in each AcOH and AcONa) was treated with Br2 (1.3 equiv) at r.t. for 5 min. The excess bromine and solvent were removed on a rotary evaporator. Work-up (CHC13) and flash chromatography afforded the desired bromobenzene. Variant 2: A solution of the aromatic compound (7 mmol) and N- halosuccinimide (NCS, NBS, or NIS, 1.06 equiv) in acetic acid (40 mL) was heated to 40-90 °C for 0.3-1 h. Evaporation, work-up (EtOAc) and flash chromatography afforded the desired halogenated benzene. General procedure 3.2: Preparation of benzylic alcohols Benzoic acid derivatives were reduced to the corresponding benzylic alcohols according to the procedure given by Bhaskar et al. J. Org. Chem. 1991, 56, 5964-5965. 4. Specific Examples
Example 59. N-9 and N-7 alkylation of purines. A suspension of purine (28.4 mmoles), benzyl halide (28.7 mmoles) in dry DMF (80 mis) was treated with K2C03 (31.2 mmoles) at 70 °C for Mrs. Extraction with EtOAc and chromatography EtOAc/Hexanes (1:1) yielded pure N9 and N-7 alkykted products. All HPLC was performed per the following parameters: HPLC Column: Zorbax 300 SB-C 18, 5 microns, 4.6 x 150 mm. HPLC Instrument: Agillent 1100 HPLC Reagent A: 0.1 %TF A/Water HPLC Reagent B: 0.05% TFA/CH3CN HPLC Method: 5%B to 100%B in 7 minutes. The following compounds were prepared in this manner. 1.1 6-Chloro-9-(2,5-dimethoxy-benzyl)-9H-ρurin-2-ykmine. HPLC R.t. 5.194 min. 1.2 6-Chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.194 min. 1.3 6-Chloro-9-(2,5-dichloro-benzyl)-9H-purin-2-ykmine. HPLC Rt. 5.846 min. 1.4 6-Chloro-9-(2,5-dichloro-benzyl)-9H-purin-2-ylamine. HPLC R.t. 5.982 min. 1.5 6-Bromo-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine. HPLC R.t. 4.947 min.
1.6 6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purine. HPLC R.t. 5.327 min
1.7 6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 4.878 min.
1.8 6-Chloro-9-(2,3,5-trifluoro-benzyl)-9H-ρurin-2-ykmine. HPLC R.t. 5.414 min.
1.9 6-Chloro-9-(3,5-dichloro-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.074 min. 1.10 6-Chloro-9-(3,5-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.257 min.
1.11 9-(2-Bromo-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ykmine. HPLC R.t. 6.026 min.
1.12 6-Chloro-9-(2,6-dibromo-3 ,5-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.022 min.
1.13 6-Chloro-9-(3-methoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.136 min.
1.14 6-Chloro-9-(2-chloro-'3,4-dimethoxy-benzyl)-9H-purin-2-ylamine. HPLC R.t. 5.445 min. 1.15 6-Chloro-9-(2,4-dimethoxy-3 -methyl-benzyl)-9H-purin-2-ykmine . HPLC R.t. 5.435 min.
1.16 6-Chloro-9-(6-chloro-benzo[l,3]dioxol-5-ylmethyl)-9H-purin-2-ykmine. HPLC Rt. 5.506min.
1.17 6-Chloro-9-(4-methoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.067 min.
1.18 4-Chloro-l-(3,4,5-trimethoxy-benzyl)-lH-pyrazolo[3 ,4-d]pyrimidin-6- ylamine. HPLC R.t. 5.683 min.
1.19 6-Bromo-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.676 min. 1.20 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-ρurin-2- ylamine. HPLC R.t. 3.941. 1.21 9-(2-Bromo-4,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ykmine. HPLC R.t. 5.458 min. 1.22 4-Chloro-l-(4-methoxy-3,5-dimethyl-ρyridin-2-ylmethyl)-lH- pyrazolo[3,4-d]pyrimidin-6-ykmine. HPLC R.t. 4.464 min. 1.23 6-Chloro-9-(2,3-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.200 min. 1.24 6-Chloro-9-(3,4-dimethoxy-benzyl)-9H-ρurin-2-ykmine. HPLC Rt. 4.753 min. 1.25 4-(2-Amino-6-chloro-purin-9-ylmethyl)-benzoic acid methyl ester. HPLC Rt. 5.052 min. 1.26 6-Chloro-9-(2-fluoro-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 4.939 min.
Example 60. Halogenation of purines. To a solution of purine (6.6 mmoles) in acetate buffer/MeOH/THF or acetic acid or dichloromethane, bromine or N-chlorosuccinimide or N-Iodosuccinimide (8.7 mmoles) was added. While bromination can be done at room temperature, chlorination and iodination can be done at 60C to 90 C in 2 hours. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 2.1 8-Bromo-6-chloro-9-(2,5-dimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.150 min. 2.2 8-Bromo-6-chloro-9-(3,4-dimethoxy-2-nitro-benzyl)-9H-purin-2-ykmine. HPLC Rt. 6.040 min. 2.3 8-bromo-6-chloro-9-(3,4-dichloro-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.878 min. 2.4 6-Chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC Rt. 5.616 min. 2.5 6-Chloro-9-(2-bromo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC Rt. 5.626 min. 2.6 6-Bromo-9-(2-bromo-3 ,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC Rt. 5.793 min. 2.7 8-Bromo-9-(2-bromo-3 ,5-trimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine. HPLC R.t. 5.720 min. 2.8 9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purine. HPLC R.t. 5.987 min 2.9 9-(2,6-Dibromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purine. HPLC R.t. 6.676 min 2.10 9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purine. HPLC R.t. 6.248 min 2.1 1 9-(2,6-Dibromo-3 4,5-trimethoxy-benzyl)-6-methoxy-9H-purine. HPLC R.t. 6.952 min 2.12 6,8-Dichloro-9-(2,6-dichloro-3,4,5-trimethoxy-benzyl)-9H-purin-2- ylamine. HPLC R.t. 6.859 min 2.13 6-Chloro-9-(2,6-dichloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 6.100 min. 2.14 6-Chloro-9-(2-iodo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 5.887 min.
Example 61. Displacement of 6-halogenated-purines. 6-halogenated purines can be replaced by H, R, NHR, OR, SR using known procedures, e.g., as described inJ. Med. Chem. 1999, 42, 2064-2086. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 3.1 9-(3,4,5-Trimethoxy-benzyl)-9H-purin-2-ykmine. HPLC R.t. 4.123 min. 3.2 2 -Amino -9-(2 -bromo-3,4,5 -trimethoxy-benzyl)-9H-purine-6 -thiol. HPLC R.t. 4.931 min. 3.3 2-Amino-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-6-ol. HPLC t. 4.610 min. 3.4 9-(2-Bromo-3 ,4,5-trimethoxy-benzyl)-6-ethylsulfanyl-9H-purin-2- ylamine. HPLC R.t. 6.039 min. 3.5 6-Methoxy-9-(3,4,5-trimethoxy-benzyl)-9H-purine. HPLC R.t. 5.020 min. 3.6 9-(3,4,5-Trimethoxy-benzyl)-9H-purin-6-ykmine. HPLC R.t. 4.248 min. 3.7 9-(3,4,5-Trimethoxy-benzyl)-9H-purine-2,6-diamine. HPLC R.t. 4.209 min. 3.8 9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purin-2-ykmine. HPLC R.t. 5.229 min. 3.9 9-(2-Bromo-3,4,5-trimethoxy-benzyl)-9H-purine-2,6-diamine. HPLC R.t. 4.884 min. 3.10 6-Methoxy-9-(3,4,5-trimethoxy-benzyl)-9H-ρurin-2-ykmine. HPLC R.t. 4.489 min. 3.11 N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purin-2-yl]-N- methykcetamide. HPLC R.t. 6.178 min.
Example 62. Acylation of 2-amino-purines 2-amino-purine can be acykted in acetic anhydride with catalytic amount of concentrated sulfuric acid or in acetic acid and catalytic amount of fuming nitric acid at room temperature. Same HPLC conditions as stated in Example 59 were used. The following compounds were prepared in this manner: 4.1 N-[6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]-acetamide. HPLC R.t. 5.744 min. 4.2 N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide. HPLC R.t. 5.603 min.
Example 63. N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]-N- methylacetamide or Methylation of compound 4.2. To a suspension of compound 4.2 (Example 62 above) and iodomethane in DMF, NaH was added. Extraction with EtOAc and chromatography yield 5. HPLC R.t. 6.177 min.
Example 64. Synthesis of 6-methyl purines The title compound was obtained by suspended purine (0.19 mmole) and tetrakis(triplιenylphosphino)-palkdium (0.019 mmole) in dry THF (3mls) before treating with trimethykluminum (2M in toluene, 0.44 mmole) under nitrogen. The solution was refluxed for 3 hours before cooling down to room temperature. Diluted the reaction mixture with toluene (5 mis) before quenching the reaction with methanol (0.5 mis) followed by ammonium chloride (1 mmole). The mixture was refluxed for 2 hours and filtered, while hot, on Celite. See J. Med. Chem, 1999, 42(12), 2064-2086. The following compounds were prepared in this manner: 6.1 9-(2-Chloro-3,4,5-trimethoxy-benzyl)-6-methyl-9H-purin-2-ykmine. HPLC R.t. 4.800 min.
Example 65 : 9-(4-Bromo-3,5-dimethyl-pyridin-2-yl)-6-chloro-9H-purin-2-ylamine The title compound was obtained by alkykting 2-amino-6-chloropurine with 4- bromo-2-bromomethyl-3,5-dimethyl-pyridine according to the general procedure 1.1. HPLC Rt: 5.301 min. 'H-NMR (CDC13): δ 8.19 (s, IH), 7.88 (s, IH), 5.41 (s, 2H), 5.06 (s, 2H), 2.53 (s, 3H), 2.39 (s, 3H). m/z (%) 367.1 (M+l, 75%), 369.1 (M+3, 100%), 371.1 (M+5, 25%). The alkykting agent, 4-bromo-2-bromomethyl-3,5-dimethyl-pyridine, could itself be prepared by any of the following three methods: Method 1
Step 1: 2,3,5-Collidine-N-oxide Oxidation of 2,3,5-collidine according to the general procedure 2.1 gave 2,3,5- collidine-N-oxide. Yield: 70%. HPLC Rt: 3.96 min. * H-NMR (CDC13): δ 8.03 (s, IH), 6.90 (s, IH), 2.47 (s, 3H), 2.31 (s, 3H), 2.24 (s, 3H). m/z (%) 138.2 (M+l, 100%). Rf (20% MeOH/EtOAc): 0.35. Step 2: 4-Bromo-2,3,5-collidine-N-oxide 2,3,5-collidine-N-oxide (1.3 g, 10 mmol) and K2C03 (2.9 g, 20 mmol) were suspended in 10 mL of CC14. Bromine (1 mL, 20 mmol) was added dropwise, and the reaction mixture was heated to reflux for 2 h. Work-up (EtOAc). and flash chromatography (10% MeOH/EtOAc) afforded the product as a solid (1.05 g, 51% yield). HPLC Rt: 5.239 min. 'H-NMR (CDC13): δ 8.06 (s, 'H), 2.56 (s, 3H), 2.43 (s, 3H), 2.31 (s, 3H). m/z (%) 216.2 (M+l, 100%), 218.2 (M+3, 100%). Rf (20% MeOH/EtOAc): 0.45. Step 3: Acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester 4-Bromo-2,3,5-collidine-N-oxide (0.25g, 11 mmol) was dissolved in acetic anhydride (5 mL) and the solution was heated to reflux for 30 min. Work-up and flash chromatography (50% Hexane/EtOAc) afforded the product (0.27 g, 96% yield). Rf (50% Hexane/EtOAc): 0.70. HPLC Rt: 4.759 min. 'H-NMR (CDC13): δ 8.26 (s, IH), 5.27 (s, 2H), 2.46 (s, 3H), 2.41 (s, 3H), 2.14 (s, 3H). Step 4: 4-Bromo-3,5-dimethyl-pyridin-2-yl methanol A suspension of acetic acid 4-bromo-3,5-dimethyl-pyridin-2-yl methyl ester (0.26 g, 1.0 mmol) and K2C03 (excess) in MeOH (5 mL) was heated to 50 °C for 15 min. Work-up (CHCI3), filtration through a silica gel pad (eluent: 100% EtOAc) and evaporation gave the title compound as a white solid (0.19 g, 88% yield). Rf (50% Hexane/EtOAc): 0.5. HPLC Rt: 3.80 min. Η-NMR (CDC13): δ 8.23 (s, IH), 4.70 (s, 2H), 2.46 (s, 3H), 2.30 (s, 3H). Step 5: 4-Bromo-2-bromomethyl-3,5-dimethyl-pyridine The title compound was obtained from 4-bromo-3,5-dimethyl-pyridin-2-yl methanol according to the general procedure 2.5. HPLC Rt: 6.323 min. 'H-NMR (CDC13): δ 8.22 (s, IH), 4.63 (s, 2H), 2.52 (s, 3H), 2.40 (s, 3H).
Method 2:
Step 1 : 2-chloromethyl-3,5-dimethyl-pyridin-4-ol The title compound was obtained by following the procedure described in the patent by Tarbit, et al. WO 99/10326. Step 2: 4-bromo-2-chloromethyl-3,5-dimethyl pyridine A neat mixture of 2-chloromethyl-3,5-dimethyl-pyridin-4-ol (8.2 g, 47.8 mmol) and POBr3 (60g, 209 mmol) was stirred at 130 °C for 3 h. The resulting viscous oil was cooled to r.t. and poured onto ice water. The pH was adjusted to 10 with solid KOH. Work-up (CHCI3), drying (MgS04) and evaporation afforded the title compound as a purple solid (8.7 g, 78% yield) which was used without purification. HPLC Rt: 6.028 min. 'H-NMR (CDC13): 8.20 (s, IH), 4.62 (s, 2H), 2.50 (s, 3H), 2.38 (s, 3H). Method 3:
Step 1: 4-bromo-2-chloromethyl-3,5-dimethyl pyridine A suspension of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine (3.24 g, 14.6 mmol) in PBr3 (8.0 ml, 85.1 mmol, 5.8 equiv.) was heated to 80 °C under nitrogen. A catalytic amount of DMF (0.50 ml, 6.4 mmol, 0.44 equiv.) was added, whereupon the suspension rapidly turned into an orange solution. After 40 min., the reaction was still incomplete as judged by HPLC. The temperature was raised to 110 °C and the reaction was prolonged for 30 min, at which point it was complete. The mixture was poured over ice, made basic with cone. aq. NH4OH and extracted into EtOAc. Washing with water, drying (brine, MgS04) and concentration gave the title compound as a pink solid (1.51 g, 44%) containing 10% of an impurity by ' H-NMR. The crude was used without further purification. 'H-NMR (CDC13) δ 8.19 (s, IH), 4.59 (s, 2H), 2.48 (s, 3H), 2.37 (s, 3H).
Example 66: 9-(4-bromo-3,5-dimethyl-pyridin-2-yl methyι)-6-chIoro-9H-purin-2- ylamine, phos hate salt The title compound was obtained by treating 9-(4-bromo-3,5-dimethyl-pyridin-2- yl methyl)-6-chloro-9H-purin-2-ykmine with H3P04 according to the general procedure 2.7. HPLC Rt: 5.294 min. Η-NMR ( 6-DMSO): δ 8.12 (s, IH), 8.09 (s, IH), 6.83 (s, 2H), 5.47 (s, 2H), 2.49 (s, 3H), 2.29 (s, 3H)
Example 67: 9-(4-bromo-3,5-dimethyl-pyridin-2-yl methyϊ)-6-chIoro-9H-purin-2- ylamine, hydrochloric acid salt The title compound was obtained by treating 9-(4-bromo-3,5-dimethyl-pyridin-2- yl methyl)-6-chloro-9H-purin-2-ykmine with HCl according to the general procedure 2.7. HPLC Rt: 5.294 min. 'H-NMR (d6-DMSO): δ 8.13 (s, IH), 8.12 (s, IH), 5.47 (s, 2H), 5.47 (s, 2H , 2.49 (s, 3H), 2.30 (s, 3H).
Example 68: 9-(4-bromo-3,5-dimethyl-l-oxy-pyridin-2-yI methyl)-6-chloro-9H- purin-2-ylamine The title compound was obtained by oxidation of 9-(4-bromo-3,5-dimethyl- pyridin-2-yl)-6-chloro-9H-purin-2-ykmine according to the general procedure 2.1. HPLC Rt: 4.916 min. Η-NMR (CDC13): δ 8.46 (s, IH), 8.07 (s, IH), 5.57 (s, 2H), 5.03 (s, 2H), 2.81 (s, 3H), 2.35 (s, 3H).
Example 69: 6-bromo-9-(4-bromo-3,5-dimethyl-pyridin-2-yl methyl) -9H-purin-2- ylamine A mixture of 6-brorno-9H-purin-2-ykmine (2.4 g, 11 mmol), 4-bromo-2- chloromethyl-3,5-dimethyl pyridine (3.5 g, 15 mmol), K2C03 (2.07 g, 15 mmol) and DMF (50 mL) was stirred at 50 °C for 2 h. Work-up and flash chromatography gave the title compound as a white solid (2.6 g, 56 %). HPLC Rt: 5.415 min. 'H-NMR (CDC13): δ 8.17 (s, IH), 7.88 (s, IH), 5.38 (s, 2H), 5.05 (s, 2H), 2.51(s, 3H), 2.37 (s, 3H).
Example 70: 6-bromo-9-(4-bromo-3,5-dimethyI-l-oxy-pyridin-2-yl methyl) -9H- purin-2-yIamine The title compound, was obtained by oxidation of 6-bromo-9-(4-bromo-3,5- dimethyl-pyridin-2-yl methyl) according to the general procedure 2.1 (52% yield). Rf (100% EtOAc): 0.1. HPLC Rt: 4.978 min. 'H-NMR (CDCI3): δ 8.47 (s, IH), 8.07 (s, IH), 5.56 (s, 2H), 5.06 (s, 2H), 2.81(s, 3H), 2.35 (s, 3H).
Example 71 : 2-(2-Amino-6-chloro-purin-9-ylmethyl)-3,5-dimethyl-pyridin-4-ol The title compound was obtained by alkykting 6-chloro-9H-purin-2-ykmine with 2-chloromethyl-3,5-dimethylpyridin-4-ol according to the general procedure 1.1. HPLC Rt: 3.624 min. Η-N (d6-DMSO): δ 8.07 (s, IH), 7.47 (s, IH), 6.90 (s, 2H), 5.20(s, 2H), 2.00 (s, 3H), 1.86 (s, 3H).
Example 72 : 6-Chloro-9- (4-ethoxy-3,5-dimethyl-pyridin-2-yImethyl)-9H-purin-2- ylamine The title compound was obtained by O-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-p ridin-4-ol with ethyl iodide using the general procedure 2.6. HPLC Rt: 4.321 min. Η-NMR. (CDC13): δ 8.21 (s, IH), 7.90 (s, IH), 5.34 (s, 2H), 5.12 (s, 2H), 3.90 (q, 2H), 2.31 (s, 3H) 2.26 (s, 3H), 1.44 (t, 3H). Example 73 : 9-(4-AUyloxy-3,5-dimethyl-pyridin-2-yImethyl)-6-chIoro-9H-purin-2- ylamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with allyll chloride using the general procedure 2.6. HPLC Rt: 4.417 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 7.90 (s, IH), 6.03-6.10 (m, IH), 5.40-5.44 (dd, IH), 5.34 (s, 2H), 5.29-5.32 (dd, IH), 5.19 (s, 2H), 4.34-4.36 (m, 2H), 2.30 (s, 3H) 2.25 (s, 3H).
Example 74: 6-Chloro-9-[4-(2-ethoxy-ethoxy)-3,5-dimethyl-pyridin-2-ylmethyl]- 9H-purin-2-ylamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin-
9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with ethoxyethyl chloride, using the general procedure 2.6. HPLC Rt: 4.388 min. 'H-NMR (CDC13): δ 8.19 (s, IH), 7.89 (s, IH),
5.33 (s, 2H), 5.14 (s, 2H), 3.97-4.00 (t, 2H), 3.73-3.76 (t, 2H), 3.56-3.61 (q, 2H), 2.33 (s, 3H), 2.26 (s, 3H), 1.22-1.26 (t, 3H).
Example 75: 6-Chloro-9-(4-isopropoxy-3,5-dimethyl-pyridin-2-yImethyI)-9H- purin-2-ylamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with isopropyl iodide using the general procedure 2.6. HPLC Rt: 4.571 min. 1H-NMR (CDC13): δ 8.17 (s, IH), 7.89 (s, IH), 5.32 (s, 2H), 5.06 (s, 2H), 4.20 (m, IH), 2.26 (s, 3H) 2.22 (s, 3H), 1.28-1.30 (d, 3H).
Example 76: 6-Chloro-9-(4-cyclopropylmethoxy-3,5-dimethyI-pyridin-2-ylmethyι)- 9H-purin-2-ylamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with cyclopropylmethyl iodide using the general procedure 2.6. HPLC Rt: 4.709 min. -NMR (CDC13): δ 8.20 (s, IH), 7.90 (s, IH),
5.34 (s, 2H), 5.09 (s, 2H), 3.68-3.70 (d, 2H), 2.32(s, 3H) 2.27 (s, 3H), 1.23-1.31 (m, IH), 0.63-0.68 (m, 2H), 0.30-O.33 (m, 2H). Example 77: 6-Chloro-9-[3,5-dimethyl-4-(3-methyl-butoxy)-pyridin-2-ylmethyl]- 9H-purin-2-yIamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with 3-methylbutyl bromide using the general procedure 2.6. HPLC Rt: 5.425 min. 'H-NMR (CDC13): δ 8.21 (s, IH), 7.90 (s, IH),
5.34 (s, 2H), 5.07 (s, 2H), 3.82-3.86 (t, 2H), 2.31 (s, 3H) 2.26 (s, 3H), 1.84-1.91 (m, IH), 1.71-1.74 (q, 2H), 1.00 (s, 3H), 0.98 (s, 3H).
Example 78: 6-Chloro-9-(4-isobutoxy-3,5-dimethyl-pyridin-2-ylmethyι)-9H-purin- 2-ylamine The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin-
9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with isobutyl bromide using the general procedure 2.6. HPLC Rt: 4.321 min. Η-NMR (CDC13): δ 8.21 (s, IH), 7.90 (s, IH), 5.34 (s, 2H), 5.12 (s, 2H), 3.58-3.56 (d, 2H), 2.30 (s, 3H) 2.26 (s, 3H), 1.09 (s, 3H), 1.08 (s, 3H).
Example 79: Acetic acid 2-[2-(2-amino-6-chloro-purin-9-ylmethyl)-3,5-dimethyI- pyridin-4-yloxy] -ethyl ester The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol with 2-bromoethyl acetate using the general procedure 2.6. HPLC Rt: 4.103 min. 'H-NMR (CDC13): δ 8.21 (s, IH), 7.90 (s, IH),
5.35 (s, 2H), 5.10 (s, 2H), 4.42 (t, 2H), 4.05(t, 2H), 2.34 (s, 3H) 2.27 (s, 3H), 2.13 (s, 3H).
Example 80: Acetic acid 3-[2-(2-amino-6-chloro-purm-9-ylmethyI)-3,5-dimethyl- pyridin-4-y!oxy]-propyI ester The title compound was obtained by 0-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridm-4-ol with 2-chloropropyl acetate the general procedure 2.6. HPLC Rt: 4.414 min. Η-NMR (CDC13): δ 8.21 (s, IH), 7.91 (s, IH), 5.34 (s, 2H), 5.12 (s, 2H), 4.34 (t, 2H), 3.90 (t, 2H), 2.31 (s, 3H), 2.25 (s, 3H), 2.15 (m, IH), 2.09 (s, 3H). Example 81 : 6-Chloro-9-(3,5-dimethyl-4-propoxy-pyridin-2-ylmethyl)-9H-purin-2- ylamine The title compound was obtained by O-alkyktion of 2-(2-amino-6-chloro-purin- 9-ylmethyl)-3,5-dimethyl-pyridin-4-ol according to the general procedure 2.6. HPLC Rt: 4.644 min. 'H-NMR (CDC13): δ 8.21 (s, IH), 7.91 (s, IH), 5.34 (s, 2H), 5.12 (s, 2H), 3.80-3.76 (t, 2H), 2.31 (s, 3H), 2.26 (s, 3H), 1.85 (m, 2H), 1.07-1.10 (t, 3H).
Example 82: 6-Chloro-9-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine Step 1: 4-Chloro-2-chloromethyl-3,5-dimethyl pyridine The title compound was obtained by treating 2-chloromethyl-3,5-dimethyl- pyridin-4-ol with POCl3 according to the general procedure 2.4 (74% yield). HPLC Rt: 5.543 min. 'H-NMR (CDCI3): 8.24 (s, IH), 4.71 (s, 2H), 2.48 (s, 3H), 2.36 (s, 3H). Step 2: 6-chloro-9-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-yl methyl) -9H-purin-2-ykmine A mixture of 6-chloro-9H-purin-2-ykmine (7 g, 41 mmol), 4-chloro-2- chloromethyl-3,5-dimethyl pyridine (8.2 g, 43 mmol), K2C03 (10 g, 72 mmol) and DMF (200 mL) was heated to 50 °C for 2 h. The reaction mixture was diluted with water (200 mL) and the resulting precipitate was collected by filtration, washed with water, and dried to give the title compound as a beige solid (11.7 g, 88 % yield, 90% purity). HPLC Rt: 5.167 min. Η-NMR (CDCI3): δ 8.24 (s, IH), 7.90 (s, IH), 5.40 (s, 2H), 5.07 (s, 2H), 2.49 (s, 3H), 2.37 (s, 3H).
Example 83: 6-ChIoro-9-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-yl methyl) -9H- purin-2-ylamine The title compound was obtained by oxidation of 6-chloro-9-(4-chloro-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the general procedure 2.1 (56% yield). HPLC Rt: 4.813 min. 'H-NMR (d6-DMSO): δ 8.31 (s, IH), 8.20 (s, IH), 6.91 (s, 2H), 5.41 (s, 2H), 2.73 (s, 3H), 2.26 (s, 3H). Examples 84: 6-Chloro-9-(3,5-dimethyl-pyridin-2-yl methyl) -9H-purin-2-ylamine Step 1: Acetic acid 3,5-dimethyl-pyridin-2-yl methyl ester The title compound was prepared from 2,3,5-collidine-N-oxide (see example 1) according to the general procedure 2.2. HPLC Rt: 2.916 min. 'H-NMR (CDC13): δ 8.30 (s, IH), 7.33 (s, IH), 5.22 (s, 2H), 2.34 (s, 3H), 2.32 (s, 3H), 2.13 (s, 3H). Step 2: 3,5-Dimethyl-pyridin-2-yl methanol The title compound was obtained by deacetyktion of acetic acid 3,5-dimethyl- pyridin-2-yl methyl ester according to the general procedure 2.3. HPLC Rt: 2.909 min. 'H-NMR (CDC13): δ 8.24 (s, IH), 7.30 (s, IH), 4.85 (broad s, IH), 4.67 (s, 2H), 2.33 (s, 3H), 2.20 (s, 3H). Step 3: 2-Bromomethyl-3,5-dimethyl pyridine The title compound was obtained from 3,5-dimethyl-pyridin-2-yl methanol according to the general procedure 2.5. HPLC Rt: 3.895 min. 'H-NMR (CDC13): δ 8.3 (s, IH), 7.3 (s, IH), 4.61 (s, 2H), 2.41(s, 3H), 2.33 (s, 3H). Step 4: 6-Chloro-9-(3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3,5-dimethyl pyridine according to the general procedure 1.1. HPLC Rt: 3.760 min. 'H-NMR (CDCI3): δ 8.21 (s, IH), 7.89 (s, IH), 7.30 (s, IH), 5.32 (s, 2H), 5.05 (s, 2H), 2.36 (s, 3H), 2.29 (s, 3H).
Example 85 : 6-Bromo-9-(4~methoxy-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine The title compound was obtained by alkylation of 6-bromo-9H-purin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine according to the general procedure 1.1. PLC Rt: 4.138. Η-NMR (CDC13): δ 8.21 (s, IH), 7.91 (s, IH), 5.34 (s, 2H), 5.12 (s, 2H), 3.77 (s, 3H), 2.32 (s, 3H), 2.27 (s, 3H).). m/z (%) 363.2(M+1, 100%), 365.2 (M+3, 100%). Example 86: 6-Bromo-9-(4-methoxy-3,5-din ethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, phosphate salt The title compound was obtained by treating 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykιnine with H3P04 according to the general procedure 2.7. HPLC Rt: 4.138. 'H-NMR (d6-DMSO): δ 8.07 (s, IH), 8.02 (s, IH), 6.84 (s, 2H), 5.35(s, 2H), 3.73 (s, 3H), 2.29 (s, 3H), 2.15 (s, 3H). ). m/z (%) 363.2(M+1, 100%), 365.2 (M+3, 100%).
Example 87: 6-Bromo-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, hydrochloride salt The title compound was obtained by treating 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ylanαine with HCl according to the general procedure 2.7. HPLC Rt: 4.138. 'H-NMR (d6-DMSO): δ 8.44 (s, IH), 8.26 (s, IH), 5.57 (s, 2H), 3.96 (s, 3H), 2.35 (s, 3H), 2.34 (s, 3H).
Example 88: 6-Bromo-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-9H- purin-2-ylamine The title' compound was obtained by oxidation of 6-bromo-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ylamine according to the general procedure 2.1. HPLC Rt: 4.439 min. 'H-NMR (CDC13): δ 8.55 (s, IH), 8.06 (s, IH), 5.50 (s, 2H), 5.12 (s, 2H), 3.76 (s, 3H), 2.60 (s, 3H), 2.25 (s, 3H). m z (%) 379.1 (M+l, 100%), 381.1 (M+3, 100%).
Example 89: 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine
Method 1 The title compound was obtained by alkykting 6-chloro-9H-purin-2-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine (or its HCl salt) according to the general procedure 1.1. Method 2 The title compound could also be obtained by 0-methyktion of 6-chloro-9-(4- hydroxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the procedure 2.6 (KOH, Mel, DMF, 80 °C, 5 min). HPLC Rt: 3.980 min. Η-NMR (CDC13): δ 8.19 (s, IH), 7.88 (s, IH), 5.32 (s, 2H), 5.07 (s, 2H), 3.75 (s, 3H), 2.29 (s, 3H), 2.24 (s, 3H).
Method 3
Step 1: (4-Methoxy-3,5-dimethyl-pyridin-2-yl)-methykmine A solution of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine hydrochloride in 7N methanolic ammonia was placed in a pressure vessel and to 100 °C for 16 h.
Concentration and flash chromatography gave the title compound as a greenish solid (76% yield). HPLC Rt: 3.773 min. Η-NMR (CDCI3): δ 8.19 (s, IH), 4.35 (s, 2H), 3.76 (s, 3H), 2.24 (s, 3H), 2.18 (s, 3H). Step 2: 6-Chloro-4-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)- pyrimidine-2,4,5-triamine A solution of 4,6-dichloro-pyrinαidine-2,5-diamine (see Seek et al. Helv. Chim. Acta. 1986, 69, 1602-1613 and US Patent No. 5,917,042), 4-methoxy-3,5-dimethyl- pyridin-2-yl)-methylamine, and Et3N in butanol was heated to reflux for 1 h to give the title compound. HPLC Rt: 3.761 min. 'H-NMR (CDCI3): δ 8.24 (s, IH), 7.15 (s, IH), 4.60 (s, 2H), 4.56-4.55 (d, 2H), 3.80 (s, 3H), 3.00 (s, 2H), 2.28 (s, 3H), 2.27 (s, 3H). Step 3: Synthesis of 6-chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-9H-purin-2-ylamine The cyclization with trimethylorthoformate in presence of acid to prepare purines can be done. See similar reaction, example 48.
Example 90: 6-chloro-9-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)-9H-purin-2- ylamine, phosphate salt The title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ykmine with H3P04 according to the general procedure 2.7. HPLC Rt: 4.003 min. 'H-NMR (d6-DMSO): δ 8.06 (s, IH), 8.03 (s, IH), 6.83 (s, 2H), 5.36 (s, 2H), 3.74 (s, 3H), 2.29 (s, 3H), 2.16 (s, 3H).
Example 91 : 6-ChIoro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, sulphate salt The title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ylamine with H2Sθ according to the general procedure 2.7. HPLC Rt: 3.999 min. 'H-NMR (d6-DMSO): δ 8.36 (s, IH), 8.15 (s, IH), 5.52 (s, 2H), 3.93 (s, 3H), 2.31 (s, 3H), 2.30 (s, 3H).
Example 92: 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine, hydrochloride salt The title' compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ykmine with HCl according to the general procedure 2.7. HPLC Rt: 4.093 min. 'H-NMR (d6-DMSO): δ 8.38 (s, IH), 8.23 (s, IH), 5.55 (s, 2H), 3.93 (s, 3H), 2.34 (s, 3H), 2.31 (s, 3H).
Example 93: 6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyI)-9H-purin-2- ylamine, mesylate salt The title compound was obtained treating 6-chloro-9-(4-methoxy-3,5-dimethyl- pyridin-2-ylmethyl)-9H-purin-2-ylamine with MeSOaH according to the general procedure 2.7. HPLC Rt: 4.093 min. 'H-NMR (d6-DMSO): δ 8.38 (s, IH), 8.17 (s, IH), 5.54 (s, 2H), 3.95 (s, 3H), 2.36 (s, 3H), 2.34 (s, 3H), 2.33 (s, 3H).
Example 94: N-[6-Chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyι)-9H- purin-2-yl] -acetamide A suspension of 6-chloro-9-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H- purin-2-ykmine (80 mg, 0.25 mmol) in acetic acid anhydride (2.2 g) was treated with one drop of concentrated H2S04 and stirred at r.t. for 5 min. Work-up (EtOAc), drying (MgS0 ) and evaporation gave the title compound as a white solid. HPLC Rt: 4.093 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 8.10 (s, IH), 5.46 (s, 2H), 3.78 (s, 3H), 2.54 (s, 3H), 2.38 (s, 3H), 2.27 (s, 3H).
Example 95: 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyI)-9H- purin-2-ylamine The title compound was obtained by oxidation of 6-chloro-9-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-9H-purin-2-ykmine according to the general procedure 2.1. HPLC Rt: 4.435 min. 'H-NMR (CDC13): δ 8.55 (s, IH), 8.06 (s, IH), 5.52 (s, 2H), 5.07(s, 2H), 3.76 (s, 3H), 2.61 (s, 3H), 2.25 (s, 3H).). m z (%) 335.1(M+1, 100%), 337.1 (M+3, 34%).
Example 96: 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-methoxy-pyridinium-2- methyl)-9H-purin-2-ylamine methyl sulfate salt A suspension of 6-chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)- 9H-purin-2-ykmine (0.2 g, 0.56 mmol) in DCM (10 ml) was heated to reflux. Dimethyl sulfate (1.12 mmol) was added dropwise (Tarbit WO 99/10326) and heating was continued for 3h. Filtration and washing (hot acetone) gave the title compound as a beige solid. HPLC Rt: 3.379 min. 'H-NMR (d6-DMSO): δ 9.68 (s, IH), 9.40 (s, IH), 5.85 (s, 2H), 4.42 (s, 3H), 4.15 (s, 3H), 4.12 (s, 3H), 2.70 (s, 3H), 2 .47 (s, 3H).
Example 97 : 6-Chloro-9-(6-chloro-4-methoxy-3 ,5-dimethyl-pyridin-2-ylmethyι)- 9H-purin-2-ylamine Method 1 6-Chloro-9-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-9H-purin-2- ylamine was treated with POCl3 according to the general procedure 2.4. Flash chromatography gave the title compound as a white solid. HPLC Rt: 5.741 min. *H- NMR (CDC13): δ 7.94 (s, IH), 5.29 (s, 2H), 5.05 (s, 2H), 3.74 (s, 3H), 2.30 (s, 3H), 2.28 (s, 3H). Method 2
Step 1: 2-Chloromethyl-4-methoxy-3,5-dimethylpyridine-l-oxide The title compound was obtained by oxidation of 2-chloromethyl-4-methoxy-3,5- dimethylpyridine according to the general procedure 2.1. HPLC Rt: 4.462 min. 'H-NMR (CDC13): δ 8.05 (s, IH), 4.93 (s, 2H), 3.77 (s, 3H), 2.37 (s, 3H), 2.24 (s, 3H). Step 2: 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine The title compound was obtained by treating 2-chloromethyl-4-methoxy-3,5- dimethylpyridine- 1-oxide with POCl3 according to the general procedure 2.4. HPLC Rt: 6.757 min. 'H-NMR (CDCI3): δ 4.64 (s, 2H), 3.79 (s, 3H), 2.35 (s, 3H), 2.33 (s, 3H). Step 3: 6-Chloro-9-(6-chloro-4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 6-chloro-9H-purin-2-ykmine with 2-chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine according to the general procedure 1.1.
Example 98: 6-ChIoro-9-(5-methoxy-4-methoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ylamine Step 1: Acetic acid 3-acetoxy-5-hydroxymethyl-2-methyl-pyridin-4- ylmethyl ester The title compound was obtained by following the procedure reported by Morisawa et al. J. Med. Chem. 1974, 17, 1083-1086. HPLC Rt: 3.08 min. 'H-NMR (CDCI3): δ 8.41 (s, IH), 5.20 (s, 2H), 4.80 (s, 2H), 2.40 (s, 3H), 2.38 (s, 3H), 2.03 (s, 3H). Step 2: Acetic acid 3-acetoxy-5-bromomethyl-2-methyl-pyridin-4- ylmethyl ester The title compound was obtained from Acetic acid 3-acetoxy-5-hydroxymethyl-
2-methyl-pyridin-4-ylmethyl ester according to the general procedure 2.5. HPLC Rt: 5.332 min. 'H-NMR (CDCI3): δ 8.43 (s, IH), 5.22 (s, 2H), 4.70 (s, 2H), 2.43 (s, 3H), 2.41 (s, 3H), 2.06 (s, 3H). Step 3: 6-Chloro-9-(5-acetoxy-4-acetoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with acetic acid 3-acetoxy-5-bromomethyl-2-methyl-pyridin-4-ylmethyl ester according to the general procedure 1.1. HPLC Rt: 4.498 min. 'H-NMR (CDC13): δ 8.42 (s, IH), 7.74 (s, IH), 5.43 (s, 2H), 5.10 (s, 2H), 5.07 (s, 2H), 2.42 (s, 3H), 2.39 (s, 3H), 1.96 (s, 3H). Step 4: 6-Chloro-9-(5-hydroxy-4-hydroxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine A suspension of 6-chloro-9-(5-acetoxy-4-acetoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine and K2C03 (excess) in MeOH was heated to 50 °C for 15 min. Filtration, work-up (EtOAc) and purification by preparative TLC gave the title compound. HPLC Rt: 4.498 min. 'H-NMR (d6-DMSO) δ 8.08 (s, IH), 7.74 (s, IH), 6.95 (s, IH), 5.31 (s, 2H), 4.74 (s, 2H), 2.31 (s, 3H). Step 5: 6-Chloro-9-(5-methoxy-4-methoxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine A mixture of 6-chloro-9-(5-hydroxy-4-hydroxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine, Mel, K2C03 (excess) and DMF was heated to 50 °C for 15 min. Work-up (EtOAc), drying (MgS0 ), evaporation, and purification by preparative TLC gave the title compound. HPLC Rt: 5.446 min. 'H-NMR (CDC13) δ 8.35 (s, IH), 7.70 (s, IH), 5.35 (s, 2H), 5.25 (s, 2H), 5.15 (s, 2H), 3.80 (s, 3H) 2.59 (s, 3H), 1.970 (s, 3H).
Example 99: Synthesis of 6-Chloro-9-(5-ethoxy-4-hydroxymethyl-6-methyl-pyridin- 3-ylmethyl)-9H-purin-2-ylamine A mixture of 6-chloro-9-(5-hydroxy-4-hydroxymethyl-6-methyl-pyridin-3- ylmethyl)-9H-purin-2-ykmine (see previous example), Etl (excess), K2C03 (excess) and DMF was heated to 50 °C for 15 min. Work-up (EtOAc), drying (MgS0 ), evaporation, and purification by preparative TLC gave the title compound. HPLC Rt: 3.720 min. "H- NMR (CDCI3) δ 8.27 (s, IH), 7.90 (s, IH), 5.40 (s, 2H), 5.1 1 (s, 2H), 4.85 (d, 2H), 4.50 (t, IH), 3.95 (q, 2H), 2.51 (s, 3H) 1.45(t, 3H). Example 100: 6-Chloro-9-(3,5-dimethyl-4-amino-pyridin-2-yImethyl)-9H-purin-2- ylamine Step 1: 2-Bromomethyl-3,5-dimethyl-4-nitro-pyridine The title compound was obtained from (3,5-dimethyl-4-nitro-pyridin-2-yl)- methanol according to the general procedure 2.5. HPLC Rt: 6.206 min. 'H-NMR (CDC13) δ 8.46 (s, IH), 4.64 (s, 2H), 2.38 (s, 3H), 2.33 (s, 3H). Step 2: 6-Chloro-9-(3,5-dimethyl-4-nitro-pyridin-2-ylmethyl)-9H-purin- 2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3,5-dimethyl-4-nitro-pyridine according to the general procedure 1.1 HPLC Rt: 6.206 min. 'H-NMR (CDCI3) δ 8.40 (s, IH), 7.94 (s, IH), 5.40 (s, 2H), 5.05 (s, 2H), 2.40 (s, 3H), 2.27 (s, 3H). Step 3: 6-Chloro-9-(3,5-dimethyl-4-amino-pyridin-2-ylmethyl)-9H- purin-2-ykmine A suspension of 6-chloro-9-(4,6-dimethyl-5-nitro-pyridin-3 -ylmethyι)-9H-purin-
2-ykmine and excess of sodium hydrosulfite (Na2S204) in methanol was stirred for 2 days at r.t. The MeOH was evaporated before extracting with EtOAc. Evaporation and purification by preparative TLC (100% EtOAc) gave the title compound. HPLC Rt: 3.544 min. 'H-NMR (CDCI3) δ 8.05 (s, IH), 7.83 (s, IH), 5.31 (s, 2H), 5.05 (s, 2H), 4.08 (s, 2H), 2.12 (s, 6H).
Example 101 : 6-Chloro-9-(3-methoxy-5-methoxymethyI-4-methyl-pyridin-2- ylmethyι)-9H-purin-2-ylamine Step 1: 3-Methoxy-5-methoxymethyl-2,4-dimethyl-pyridine The title compound was obtained by treating a solution of 5-hydroxymethyl-2,4- dimethyl-pyridin-3-ol hydrochloride (1 g, 5.2 mmol) in DMF with Mel (2.28 g, 15 mmol) and NaH (0.6 g, 50 mmol) for 1 h at 0 °C. HPLC Rt: 2.835 min. 'H-NMR (CDCI3) δ 8.16 (s, IH), 4.44 (s, 2H), 3.75 (s, 3H), 3.41 (s, 3H), 2.53 (s, 3H), 2.32 (s, 3H). Step 2: 3-Methoxy-5-methoxymethyl-2,4-dimethyl-pyridine 1-oxide The title compound was obtained by oxidation of 3-methoxy-5-methoxymethyl- 2,4-dimethyl-pyridine according to the general procedure 2.1. HPLC Rt: 4.181 min. 'H- NMR (CDC13) δ 8.18 (s, IH), 4.39 (s, 2H), 3.76 (s, 3H), 3.43 (s, 3H), 2.52 (s, 3H), 2.46 (s, 3H). Step 3: Acetic acid 3-methoxy-5-methoxymethyl-4-methyl-pyridin-2- ylmethyl ester The title compound was obtained by treating 3-methoxy-5-methoxymethyl-2,4- dimethyl-pyridine 1-oxide with Ac20 according to the general procedure 2.2. HPLC Rt: 4.062 min. 'H-NMR (CDCI3) δ 8.32(s, IH), 5.27 (s, 2H), 4.47 (s, 2H)„ 3.80 (s, 3H), 3.43 (s, 3H), 2.34 (s, 3H), 2.25 (s, 3H). Step 4: (3-Methoxy-5-methoxymethyl-4-methyl-pyridin-2-yl)-methanol The title compound was obtained from acetic acid 3-methoxy-5-methoxymethyl- 4-methyl-pyridin-2-ylmethyl ester according to the general procedure 2.3. HPLC Rt: 3.465 min. 'H-NMR (CDCI3) δ 8.22(s, IH), 4.75 (d, 2H), 4.47 (s, 2H), 4.20 (t, IH), 3.77 (s, 3H), 3.43 (s, 3H), 2.34 (s, 3H). Step 5: 2-Bromomethyl-3-methoxy-5-methoxymethyl-4-methyl-pyridine The title compound was obtained from (3-methoxy-5-methoxymethyl-4-methyl- pyridin-2-yl)-methanol according to the general procedure 2.5. HPLC Rt: 4.498 min. 'H-NMR (CDCI3) δ 8.22(s, IH), 4.695 (s, 2H), 4.42 (s, 2H), 3.86 (s, 3H), 3.40 (s, 3H), 2.31 (s, 3H). Step 6: 6-Chloro-9-(3-methoxy-5-methoxymethyl-4-methyl-pyridin-2- ylmethyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-clιloropurine with 2-bromomethyl-3-methoxy-5-methoxymethyl-4-methyl-pyridine according to the general procedure 1.1. HPLC Rt: 4.254 min. 'H-NMR (CDCI3) δ 8.210 (s, IH), 7.96 (s, IH), 5.40 (s, 2H), 5.05 (s, 2H), 4.42 (s, 2H ), 3.78 (s, 3H), 3.40 (s, 3H), 2.31 (s, 3H). Example 102: 6-Chloro-9-(5-chloro-6-methoxy-pyridin-3-ylmethyl)-9H-purin-2- ylamine Step 1: (5-Chloro-6-methoxy-pyridin-3-yl)-methanol (5,6-Dichloro-pyridin-3-yl)-methanol was dissolved in a saturated solution of NaOMe in MeOH and heated to reflux overnight. Evaporation of MeOH, work-up (EtOAc) and evaporation gave the title compound. 'H-NMR (CDC13) δ 8.03 (d, IH), 7.72 (d, IH), 4.65 (s, 2H), 4.04 (s, 3H). Step 2: 5-Bromomethyl-3-chloro-2-methoxy-pyridine The title compound was obtained from (5-chloro-6-methoxy-pyridin-3-yl)- methanol according to the general procedure 2.5. 'H-NMR (CDC13) δ 8.05 (d, IH), 7.70 (d, IH),
4.42 (s, 2H), 4.02 (s, 3H).
Step 3: 6-Chloro-9-(5-chloro-6-methoxy-pyridin-3-ylmethyl)-9H-purin- 2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
5-bromomethyl-3-chloro-2-methoxy-pyridine according to the general procedure 1.1. HPLC Rt: 5.256 min. 'H-NMR (CDC13) δ 8.1 l(d, IH), 7.78 (s, IH), 7.63 (d, IH), 5.19 (s, 2H), 5.16 (s, 2H), 4.04 (s, 3H ).
Example 103 : 6-chloro-9-(3,4-dimethoxy-pyridin-2-yImethyI)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
2-chloromethyl-3,4-dimethoxylpyridine hydrochloride according to the general procedure 1.1. HPLC Rt: 3.777 min. Η-NMR (CDC13): δ 8.19 (d, IH), 7.95 (s, IH), 6.82 (d, IH), 5.39 (s, 2H), 5.09 (s, 2H), 3.92 (s, 3H), 3.87 (s, 3H). Example 104: 6-chloro-9-(3-methoxy-6-methyI-pyridm-2-ylmethyl)-9H-purin-2- ylamine Step 1: (3-Methoxy-6-methyl-pyridin-2-yl)-methanol The title compound was obtained by 0-methyktion of 2-hydroxymethyl-6- methyl-pyridin-3-ol according to the general procedure 2.6. HPLC Rt: 2.304 min. !H- NMR (CDC13) δ 7.05-7.1 l(m, 2H), 4.72-4.71 (d, 2H), 4.47-4.49 (t, IH), 3.84 (s, 3H), 2.51 (s, 3H). Step 2: 2-Bromomethyl-3-methoxy-6-methyl-pyridine The title compound was obtained from (3-Methoxy-6-methyl-pyridin-2-yl)- methanol according to the general procedure 2.5. HPLC Rt: 4.361. Η-NMR (CDC13) δ 7.06-7.12 (m, 2H), 4.61 (s, 2H), 3.89 (s, 3H), 2.49 (s, 3H). Step 3: 6-chloro-9-(3-methoxy-6-methyl-pyridin-2-ylmethyl)-9H-purin- 2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3- methoxy-6-methylpyridine according to the general procedure 1.1. HPLC Rt: 3.777 min. 'H-NMR (CDCI3): δ 7.92 (s, IH), 7.11 (m, 2H), 5.39 (s, 2H), 5.15 (s, 2H), 3.85 (s, 3H), 2.45 (s, 3H).
Example 105: 6-Chloro-9-(5-methoxy-4,6-dimethyl-pyridin-3-ylmethyI)-9H-purin- 2-ylamine Step 1: (5-Methoxy-4,6-dimethyl-pyridin-3-yl)-methanol The title compound was obtained by 0-methyktion of 5-hydroxymethyl-2,4- dimethyl-pyridin-3-ol according to the general procedure 2.6. HPLC Rt: 3.114 min. *H- NMR (CDCI3) δ 8.08 (s, IH), 4.67 (s, 2H), 3.74 (s, 3H), 2.49 (s, 3H), 2.33 (s, 3H). Step 2: 5-Bromomethyl-3-methoxy-2,4-dimethyl-pyridine The title compound was obtained from (5-methoxy-4,6-dimethyl-pyridin-3-yl)- methanol according to the general procedure 2.5. HPLC Rt: 2.873. 'H-NMR (CDC13) δ 8.22 (s, IH), 4.50 (s, 2H), 3.764(s, 3H), 2.54 (s, 3H), 2.37 (s, 3H). Step 3: 6-Chloro-9-(5-methoxy-4,6-dimethyl-pyridin-3-ylmethyl)-9H- purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-3- methoxy-2,4-methylpyridine according to the general procedure 1.1. HPLC Rt: 3.7387 min. 'H-NMR (CDC13): δ 8.25 (s, IH), 7.63 (s, IH), 5.39 (s, 2H), 5.11 (s, 2H), 3.73 (s, 3H), 2.55 (s, 3H), 2.22 (s, 3H).
Example 106: 9-(4-Methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2-yIamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-chloromethyl-4-methoxy-3,5-dimethylpyridine hydrochloride according to the general procedure 1.1. HPLC Rt: 3.434 min. 'H-NMR (CDC13): δ 8.75 (s, IH), 8.25 (s, IH), 7.90 (s, IH), 5.37(s, 2H), 5.07 (s, 2H), 3.77 (s, 3H), 2.32 (s, 3H), 2.26 (s, 3H).
Example 107: 6-Chloro-9-(3,5-dimethoxy-4-methyl-benzyl)-9H-purin-2-ylamiαe Step 1: (3,5-Dimethoxy-4-methyl-phenyl)-methanol The title compound was obtained by reducing 3,5-dimethoxy-4-methyl-benzoic acid as described by Bhaskar et al. J. Org. Chem. 1991, 56, 5964-5965. HPLC Rt: 5.352. 'H-NMR (CDC1 ): δ 6.58(s, 2H), 4.68 (s, 2H), 3.85 (s, 6H), 2.10 (s, 3H). Step 2: 5-Bromomethyl-l,3-dimethoxy-2-methyl-benzene The title compound was obtained from (3,5-dimethoxy-4-methyl-phenyι)- methanol according to the general procedure 2.5. HPLC Rt: 7.200. 'H-NMR (CDC13): δ 6.59 (s, 2H), 4.51 (s, 2H), 3.86 (s, 3H),3.85 (s, 3H), 2.22 (s, 3H). Step 3: 6-Chloro-9-(3,5-dimethoxy-4-methyl-benzyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-l,3-dimethoxy-4-methyl benzene according to the general procedure 1.1. HPLC Rt: 5.841 min. 'H-NMR (CDCI3): δ 7.75 (s, IH), 6.46 (s, IH), 5.21 (s, 2H), 5.07(s, 2H), 3.80 (s, 6H), 2.09 (s, 3H). Example 108: 9-(2-Bromo-3,5-dimethoxy-4-methyl-benzyl)-6-chloro-9H-purin-2- ylamine The title compound was obtained by brominating 6-chloro-9-(3,5-dimethoxy-4- methyl-benzyl)-9H-purin-2-ykmine with bromine according to the general procedure 3.1. HPLC Rt: 6.222 min. 'H-NMR (CDCI3): δ 7.85 (s, IH), 6.60 (s, IH), 5.36 (s, 2H), 5.07(s, 2H), 3.80 (s, 3H), 3.74 (s, 3H), 2.20 (s, 3H).
Example 109: 8-Bromo-9-(2-bromo-3,5-dimethoxy-4-methyl-benzyl)-6-chloro-9H- purin-2-ylamine The title compound was obtained by brominating 6-chloro-9-(3,5-dimethoxy-4- methyl-benzyl)-9H-purin-2-ykmine with excess bromine according to the general procedure 3.1. HPLC Rt: 7.040 min. 'H-NMR (CDCI3): δ 5.88 (s, IH), 5.38 (s, 2H), 5.14(s, 2H), 3.83 (s, 3 H), 3.57 (s, 3H), 2.19 (s, 3H).
Example 110: 2,6-Dichloro-9-(4-methoxy-3,5-dimethyI-pyridin-2-ylmethyl)-9H- purine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
2-chloromethyl-4-methoxy-3,5-dimethylpyridine (or its HCl salt) according to the general procedure 1.1. HPLC Rt: 5.081 min. 'H-NMR (CDCI3): δ 8.30 (s, IH), 8.17 (s,
IH), 5.50 (s, 2H), 3.80 (s, 3H), 2.38 (s, 3H), 2.27 (s, 3H). 1 Example 111 : 8-butyl-6-chloro-9-(3,4,5-trimethoxy-benzyI)-9H-purin-2-ylamine Step 1: 6-Chloro-N4-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,4,5- triamine The title compound was obtained by refluxing 4,6-dichloro-pyrimidine-2,5- diamine (see Seek et al. Helv. Chim. Acta. 1986, 69, 1602-1613 and US Patent No. 5,917,042), 3,4,-5-trimethoxybenzykmine, and Et3N in butanol or ethanol for 1 to 14 h. HPLC Rt: 4.327 min. 'H-NMR (CDCI3): δ 6.57 (s, 2H), 5.65 (t, IH), 4.75 (s, 2H), 4.54 (d, 2H), 3.86-3.87 (d, 9H). Step 2: 8-Butyl-6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2- ylamine The title compound was obtained by following the procedure given in WO 98/39344. HPLC Rt: 5.971 min. 'H-NMR (CDC13): δ 6.34(s, 2H), 5.19 (s, 2H), 5.04 (s, 2H), 3.81 (s, 3H), 3.77 (s, 6H), 2.71-2.75 (t, 2H), 1.68-1.74 (m, 2H), 1.35-1.41 (m, 2H), 0.88-0.92 (t, 2H).
Example 112: 6-Chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 3,4,5-trimethoxybenzyl according to the general procedure 1.1. The title compound was also obtained by treating a solution of 6-chloro-N-4-(3 ,4,5-trimethoxy-benzyl)- pyrimidine-2,4,5-triamine in triethyl orthoformate with a catalytic amount of cone. HCl at r.t. for 20 min. HPLC Rt: 4.906 min. 'H-NMR (CDC13): δ 7.76 (s, IH), 6.51 (s, 2H), 5.18 (s, 2H), 5.12 (s, 2H), 3.85 (s, 3H), 3.84 (s, 6H).
Example 113: Acetic acid 4-(2-amino-6-chIoro-purin-9-ylmethyι)-3-bromo-2,6- dimethoxy-phenyl ester Step 1: Acetic acid 4-hydroxymethyl-2,6-dimethoxy-phenyl ester A solution of acetic acid4-formyl-2,6-dimethoxy-phenyl ester (25 mmol) in MeOH (100 mL) was treated with NaBEU (1 equiv.) at 0 °C for 15 min. After quenching with acetone and evaporating the solvent, work-up (CH2C12) and evaporation gave the title compound as a white solid (85% yield). Rf (in EtOAc/Hexane 1 : 1): 0.5. 'H-NMR (CDC13): δ 6.66 (s, IH), 4.68-4.70 (d, 2H), 3.85 (s, 3H), 2.36 (s, 3H), 1.74 (t, IH). Step 2: Acetic acid 3-bromo-4-hydroxymethyl-2,6-dimethoxy-phenyl ester The title compound was obtained by bromination of acetic acid 4- hydroxymethyl-2,6-dimethoxy-phenyl ester in AcOH/AcONa buffer according to the general procedure 3.1. Rf (EtOAc/Hexane 1:3): 0.2. 'H-NMR (CDC13): δ 7.01 (s, IH), 4.75-4.76 (d, 2H), 3.86 (s, 3H), 3.85 (s, 3H ), 2.38 (s, 3H), 2.05 (t, IH). Step 3: Acetic acid 3-bromo-4-bromomethyl-2,6-dimethoxy-phenyl ester The title compound was obtained from Acetic acid 3-bromo-4-hydroxymethyl- 2,6-dimethoxy-phenyl ester according to the general procedure 2.5. Rf ( EtOAc/Hexane 1:3): 0.8. -NMR (CDC13): δ 6.87 (s, IH), 4.60 (s, 2H), 3.84 (s, 3H), 3.83 (s, 3H ), 2.36 (s, 3H). Step 4: Acetic acid 4-(2-amino-6-chloro-purin-9-ylmethyl)-3-bromo-2,6- dimethoxy-phenyl ester The title compound was obtained by alkylation of 2-amino-6-chloropurine with acetic acid 3-bromo-4-bromomethyl-2,6-dimethoxy-phenyl ester according to the general procedure 1.1. HPLC Rt: 5.081 min. 'H-NMR (CDC13): δ 8.30 (s, IH), 8.17 (s, IH), 5.50 (s, 2H), 3.80 (s, 3H), 2.38 (s, 3H), 2.27 (s, 3H).
Example 114: 4-(2-amino-6-chloro-purin-9-ylmethyl)-3-bromo-2,6-dimethoxy- phenol The title compound was obtained by deacetyktion of Acetic acid 4-(2-amino-6- chloro-purin-9-ylmethyl)-3-bromo-2,6-dimethoxy-phenyl ester (see previous example) in NH3/MeOH at r.t. for 0.5 h or K2C03 in methanol according to the general procedure 2.3. HPLC Rt: 4.912 min. 'H-NMR (CDC13): δ 7.85 (s, IH), 6.72 (s, IH), 5.70 (s, IH), 5.33 (s, IH), 5.07 (s, 2H), 3.94 (s, 3H), 3.82 (s, 3H).
Example 115: 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chIoro-9H-purin-2-ylamine The title compound was obtained by 0-methyktion of 4-(2-amino-6-chloro- purin-9-ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see previous example) according to the general procedure 2.6. The title compound could also be obtained by bromination of 6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine (see example 48) in acetate buffer according to the general procedure 3.1. HPLC Rt: 5.742 min. 'H-NMR (CDC13): δ 7.85 (s, IH), 6.66 (s, IH), 5.32 (s, 2H), 5.11 (s, 2H), 3.90 (s, 3H), 3.87 (s, 3H), 3.76 (s, 3H). Example 116: 9-(4-allyloxy-2-bromo-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with 3-bromo-propene in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.309 min. 'H-NMR (CDC1 ): δ 7.84 (s, IH), 6.64 (s, IH), 6.00-6.10 (m, 2H), 5.36-5.36 (m, IH), 5.31 (s, 2H), 5.20-5.21 (m, 2H), 4.52-4.54 (m, 2H), 3.90 (s, 3H), 3.74 (s, 2H).
Example 117: 9-(2-bromo-4-chloromethoxy-3,5-dimethoxy-benzyl)-6-chIoro-9H- purin-2-ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with chloroiodomethane in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.109 min. 'H-NMR (CDCI3): δ 7.87 (s, IH), 6.66 (s, IH), 5.91 (s, 2H), 5.34 (s, 2H), 5.08 (s, 2H), 3.90 (s, 3H), 3.76 (s, 3H).
Example 118: 9-[2-bromo-4-(2-chIoro-ethoxy)-3,5-dimethoxy-benzyI]-6-chloro-9H- purin-2-ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with l-bromo-2-chloro- ethane in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.285 min. 'H- NMR (CDCI3): δ 7.86 (s, IH), 6.67 (s, IH), 5.37 (s, 2H), 5.32 (s, 2H), 4.22-4.25 (t, 2H), 3.91 (s, 3H), 3.77-3.78 (t, 2H) 3.75 (s, 3H).
Example 119: 9-(2-bromo-4-cycIopropylmethoxy-3,5-dimethoxy-benzyl)-6-chloro- 9H-purin-2-ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with bromomethyl- cyclopropane in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.512 min. 'H-NMR (CDCI3): δ 7.86 (s, IH), 6.67 (s, IH), 5.34 (s, 2H), 5.17 (s, 2H), 3.95 (s, 3H), 3.83-3.84 (d, 2H), 3.77 (s, 3H) 1.27 (m, IH), 0.58-0.62 (m, 2H), 0.28-0.32 (m, 2H). Example 120 : 9-(2-bromo-4-ethoxy-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Etl in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.112 min. 'H-NMR (CDC13): δ 7.84 (s, IH), 6.65 (s, IH), 5.31 (s, 2H), 5.13 (s, 2H), 4.04-4.09 (q, 2H), 3.90(s, 3H), 3.82 (s, 3H), 1.32-1.38 (t, 3H).
Example 121 : 9-(2-bromo-3,5-dimethoxy-4-propoxy-benzyl)-6-chIoro-9H-purin-2- ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Prl in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.594 min. 'H-NMR (CDC13): δ 7.84 (s, IH), 6.65 (s, IH), 5.30 (s, 2H), 5.14 (s, 2H), 3.93-3.97 (t, 2H), 3.89 (s, 3H), 3.74 (s, 3H), 1.72-1.81 (m, 2H), 1.00-1.04 (t, 3H).
Example 122: 9-(2-bromo-4-butoxy-3,5-dimethoxy-benzyI)-6-chloro-9H-purin-2- ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) with Bui in DMF in the presence of K2C03 at 70 °C for 0.25-1 h. HPLC Rt: 6.594 min. 'H-NMR (CDC13): δ 7.84 (s, IH), 6.65 (s, IH), 5.30 (s, 2H), 5.14 (s, 2H), 3.97-4.00 (t, 2H), 3.89 (s, 3H), 3.74 (s, 3H), 1.68-1.76 (m, 2H), 1.44-1.53 (m, 2H), 0.94-0.97 (t, 3H).
Example 123 : 6-chloro-9-(3-methoxymethoxy-6-methyI-pyridm-2-ylmethyl)-9H- purin-2-yIamine Step 1: (3-methoxymethoxy-6-methyl-pyridin-2-yl)-methanol The title compound was obtained by 0-alkyktion of 2-hydroxymethyl-6-methyl- pyridin-3-ol with chloromethyl methyl ether according to the general procedure 2.6. 'H- NMR (CDC13) δ 7.28-7.30 (d, IH), 6.98-7.00 (d, IH), 5.17 (s, 2H), 4.71 (s, 2H), 4.50 (s, 2H), 3.45 (s, 3H), 2.49 (s, 3H). Step 2: 2-Bromomethyl-3-methoxymethoxy-6-methyl-pyridine The title compound was obtained from (3-methoxymethoxy-6-methyl-pyridin-2- yl)-methanol according to the general procedure 2.5. 'H-NMR (CDC13) δ 7.32-7.40 (d IH), 7.08-7.10 (d, 1H),5.30 (s, 2H), 4.67 (s, 2H), 3.55 (s, 3H), 2.54 (s, 3H). Step 3: 6-Chloro-9-(3-methox3τnethoxy-6-methyl-pyridin-2-ylmethyl)- 9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3-methoxymethoxy-6-methyl-pyridine according to the general procedure 1.1. HPLC Rt: 3.884 min. 'H-NMR (CDC13): δ 7.92 (s, IH), 7.34-7.36 (d, IH), 7.05-7.07 (d, IH), 5.39 (s, 2H), 5.17 (s, 2H), 5.06 (s, 2H), 3.40 (s, 3H), 2.44 (s, 3H).
Example 124: 3-(2-Amino-6-chloro-purin-9-ylmethyl)-3H-benzothiazole-2-thione The title compound was obtained by alkylation of 2-amino-6-chloropurine with 3-chloromethyl-3H-benzothiazole-2-thione according to the general procedure 1.1. HPLC Rt: 5.982 min. 'H-NMR (d6-DMSO): δ 8.37 (s, IH), 8.25-8.28 (d, IH) 7.79- 7.81 (d, IH), 7.54-7.56 (t, IH), 7.39-7.43 (m IH), 7.20 (s, 2H), 6.62 (s, 2H), 3.34 (s, 3H).
Example 125: 6-Chloro-9-(2,5-dimethyl-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-chloromethyl-l,4-dimethyl-benzene according to the general procedure 1.1. HPLC Rt: 5.920 min. 'H-NMR (d6-DMSO): δ 8.10 (s, IH), 7.10 (d, IH) 7.04 (d, IH), 6.95 (s, 2H), 6.65(s, IH), 5.23, (s, 2H), 3.34 (s, 3H), 2.30 (s, 3H), 2.17 (s, 3H).
Example 126: 6-Chloro-9-isoquinolin-l-ylmethyl-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 1-bromomethyl-isoquinoline according to the general procedure 1.1. HPLC Rt: 4.306 min. 'H-NMR (d6-DMSO): δ 8.43-8.45 (d, IH) 8.27-8.28 (d, IH), 8.20 (s, IH), 8.03- 8.05 (d IH), 7.85-7.89 (m, IH), 7.77-7.82 (m, 2H), 6.83 (s, 2H), 6.04 (s, 2H). Example 127: 9-benzo [l,2,5]thiadiazol-5-ylmethyI-6-chloro-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-benzo[l,2,5]thiadiazole according to the general procedure 1.1. HPLC Rt: 4.931 min. 'H-NMR (d6-DMSO): δ 8.31 (s, IH), 8.11 (d, IH), 7.87 (br. s, IH), 7.70- 7.67 (dd, IH), 6.98 (br, s, 2H), 5.52 (s, 2H).
Example 128: 9-(l-methyl-lH-benzotriazol-5-ylmethyl)-6-chloro-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 6-bromomethyl-l -methyl- lH-benzotriazole according to the general procedure 1.1. HPLC Rt: 4.295 min. 'H-NMR (d6-DMSO): δ 8.29 (s, IH), 7.95 (s, IH), 7.86-7.84 (d, IH), 7.55-7.53 (dd, IH), 6.97 (s, 2H), 5.45 (s, 2H), 4.3 (s, 3H).
Example 129: 6-ehIoro-9-(6-chloro-benzo[l,2,5]thiadiazol-5-ylmethyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-bromomethyl-6-chloro-benzo[ 1 ,2,5]thiadiazole according to the general procedure 1.1. HPLC Rt: 5.400 min. 'H-NMR (d6-DMSO): δ 8.45 (s, IH), 8.20 (s, IH), 7.64 (s, IH), 6.97 (s, 2H), 5.55 (s, 2H).
Example 130: 9-benzo [l,2,5]thiadiazol-4-yImethyl-6-chloro-9H-purin-2-yIamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 4-bromomethyl-benzo[l,2,5]thiadiazole according to the general procedure 1.1. HPLC Rt: 5.027 min. 'H-NMR (d6-DMSO): δ 8.26 (s, IH), 8.04-8.07 (d, IH), 7.68-7.64 (dd, IH), 7.22-7.20 (dd, IH), 6.93 (s, 2H), 5.79 (s, 2H).
Example 131: 6-chloro-9-(6-fluoro-4a,8a-dihydro-4H-benzo[l,3]dioxin-8-ylmethyl)- 9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
8-chloromethyl-6-fluoro-4a,8a-dihydro-4H-benzo[l,3]dioxine according to the general procedure 1.1. HPLC Rt: 5.172 min. 'H-NMR (CDC13): δ 7.84 (s, IH), 6.92-6.89 (dd, IH), 6.70-6.67 (dd, IH), 5.31 (s, 2H), 5.22 (s, 2H), 5.07 (s, 2H), 4.90 (s, 2H).
Example 132: l-[3-(2-Amino-6-chloro-purin-9-yImethyl)-4-methoxy-phenyl]- ethanone The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-(3-chloromethyl-4-methoxy-phenyl)-ethanone according to the general procedure 1.1. HPLC Rt: 4.887 min. 'H-NMR (CDC13): δ 8.03-8.02 (d, IH), 7.97-7.95 (dd, IH), 7.81 (s, IH), 6.96-6.93 (d, IH), 5.25 (s, 2H), 5.08 (s, 2H), 3.93 (s, 3H), 2.54 (s, 3H).
Example 133 : 6-chloro-9-(3-trifluoromethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-3-trifluoromethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.965 min. 'H-NMR (CDC13): δ 7.76 (s, IH), 7.39-7.37 (t, IH), 7.21-7.15 (m, 3H), 5.27 (s, 2H), 5.12 (s, 2H).
Example 134: 6-chIoro-9-(2-fluoro-3-trifluoromethyl-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-fluoro-3-trifluoromethyl-benzene according to the general procedure 1.1. HPLC Rt: 4.841 min. 'H-NMR (CDC13): δ 7.83 (s, IH), 7.63-7.59 (t, IH), 7.48- 7.45(t, IH), 7.25-7.22 (t, IH), 5.36 (s, 2H), 5.12 (s, 2H).
Example 135: 6-ChIoro-9-(2-fluoro-4,5-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: (2-Fluoro-4,5-dimethoxy-phenyl)-methanol A solution of 2-fluoro-4,5-dimethoxy-benzaldehyde (6.0 mmol) in MeOH (10 mL) was treated with NaBH4 (1.2 equiv.) at 0-23 °C for 0.5 h. After quenching with acetone and evaporating the solvent, work-up (CH2C12), drying (MgS04) and evaporation gave the title compound as a crude oily product (94% yield). Η-NMR (CDC13): δ 6.90-6.88 (d, IH), 6.61-6.64 (d, IH), 4.65-4.63 (d, 2H), 3.86 (s, 3H), 3.84 (s, 3H), 2.00-1.94 (t, IH). Step 2: l-Bromomethyl-2-fluoro-4,5-dimethoxy-benzene The title compound was obtained from (2-fluoro-4,5-dimethoxy-phenyl)- methanol according to the general procedure 2.5. 'H-NMR (CDC13): δ 6.84-6.81 (d, IH), 6.64-6.61 (d, IH), 4.52 (s, 2H), 3.89 (s, 3H), 3.84 (s, 3H). Step 3: 6-Chloro-9-(2-fluoro-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-fluoro-4,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 4.939 min. 'H-NMR (CDC13): δ 7.79 (s, IH), 6.88-6.85 (d, IH), 6.69-6.66 (d, IH), 5.22 (s, 2H), 5.12 (s, 2H), 3.89 (s, 3H), 3.82 (s, 3H).
Example 136: 6-chloro-9-(2,3-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: l-Bromomethyl-2,3-dimethoxy-benzene The title compound was obtained from (2,3-dimethoxy-phenyl)-methanol according to the general procedure 2.5. 'H-NMR (CDC13): δ 7.02-7.08 (t, IH), 6.95-6.98 (dd, IH), 6.87-6.91 (dd, IH), 4.57 (s, 2H), 3.92 (s, 3H), 3.86 (s, 3H). Step 2: 6-Chloro-9-(2,3-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,3-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.200. 'H-NMR (CDC13): δ 7.81 (s, IH), 7.02-7.08 (t, IH), 6.95-6.98(dd, IH), 6.87- 6.91 (dd, IH), 5.28 (s, 2H), 5.12 (s, 2H), 3.92 (s, 3H), 3.87 (s, 3H).
Example 137: 6-chloro-9-(3,4-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: 4-Bromomethyl-l,2-dimethoxy-benzene The title compound was obtained from (3,4-dimethoxy-phenyl)-methanol according to the general procedure 2.5. 'H-NMR (CDC13): δ 6.95-6.98 (dd, IH), 6.92- 6.94 (d, IH), 6.78-6.81 (d, IH), 4.51 (s, 2H), 3.92 (s, 3H), 3.86 (s, 3H). Step 2: 6-Chloro-9-(3,4-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 4-bromomethyl-l,2-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 4.753. 'H-NMR (CDC13): δ 7.71 (s, IH), 6.87 (s, 2H), 6.82 (s, IH), 5.20 (s, 2H), 5.12 (s,
2H), 3.92 (s, 3H), 3.87 (s, 3H).
Example 138: 9-(2-chloro-3,4,5-trimethoxy-benzyl)-6-methyl-9H-purin-2-ylamine A suspension of 6-chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2- ylamine, see example 97) (0.2 mmol) and tetrakis(triphenylphosphino)-palkdium (0.02 mmol) in dry THF (3 mL) was treated with trimethykluminum (2M in toluene, 0.45 mmol) under nitrogen and heated to reflux for 3 h. The reaction mixture was cooled to r.t., diluted with toluene (5 mL) and quenched with methanol (0.5 mL) followed by ammonium chloride (1 mmol). The mixture was heated to reflux for 2 h and filtered, while hot, on Celite. SeeJ. Med. Chem. 1999, 42, 2064-2086. TLC (100% EtOAc) Rf was 0.2. HPLC Rt: 4.800 min.
Example 139: 6-chIoro-9-(2-chIoro-4,5-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: (2-Chloro-4,5-dimethoxy-phenyl)-methanol The title compound was obtained by chlorination of (3,4-dimethoxy-phenyl)- methanol according to the general procedure 3.1. 'H-NMR (CDC1 ): δ 7.01 (s, IH), 6.88 (s, IH), 4.75-4.73 (d, 2H), 3.91 (s, 3H), 3.90 (s, 3H), 1.95-1.92 (t, IH). Step 2: l-Bromomethyl-2-chloro-4,5-dimethoxy-benzene The title compound was obtained from (2-chloro-4,5-dimethoxy-phenyl)- methanol according to the general procedure 2.5. 'H-NMR (CDCI3): δ 6.92 (s, IH), 6.88 (s, IH), 4.60 (s, 2H), 3.91 (s, 3H), 3.90 (s, 3H). Step 3: 6-Chloro-9-(2-chloro-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-chloro-4,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.366 min. Η-NMR (CDCI3): δ 7.81 (s, IH), 7.28 (s, IH), 6.92 (s, IH), 5.30 (s, 2H), 5.15 (s, 2H), 3.90 (s, 3H), 3.84 (s, 3H).
Example 140 : 6-chloro-9-(2-io do-4,5-dimethoxy-benzyl)-9H-purin-2-yIamine Step 1: 4-Bromomethyl-l,2-dimethoxy-benzene The title compound was obtained from (3,4-dimethoxy-phenyl)-methanol according to the general procedure 2.5. 'H-NMR (CDC13): δ 6.95-6.98 (dd, IH), 6.92- 6.94 (d, IH), 6.78-6.81 (d, IH), 4.51 (s, 2H), 3.92 (s, 3H), 3.86 (s, 3H). Step 2: l-Bromomethyl-2-iodo-4,5-dimethoxy-benzene The title compound was obtained by iodination of 4-bromomethyl-l,2- dimethoxy-benzene according to the general procedure 3.1. 'H-NMR (CDC13): δ 7.04 (s, IH), 6.95 (s, IH), 4.61 (s, 2H), 3.91 (s, 3H), 3.90 (s, 3H). Step 3: 6-Chloro-9-(2-iodo-4,5-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-iodo-4,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.470 min. 'H-NMR (CDCI3): δ 7.84 (s, IH), 7.08 (s, IH), 6.93 (s, IH), 5.30 (s, 2H), 5.15 (s, 2H), 3.91 (s, 3H), 3.82 (s, 3H).
Example 141 : 6-Bromo-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine Step 1: 2-Chloro-l-chloromethyl-3,4,5-trimethoxy-benzene The title compound was obtained by chlorination of 5-chloromethyl-l,2,3- trimethoxy-benzene according to the general procedure 3.1. H-NMR (CDC13): δ 6.82 (s, IH), 4.70 (s, IH), 3.93 (s, 3H), 3.90 (s, 3H) 3.87 (s, 3H). Step 2: Synthesis of 6-chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H- purin-2-ykmine The title compound was obtained by alkylation of 6-bromoguanine with 2-chloro- l-chloromethyl-3,4,5-trimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.676 min. Η-NMR (CDCI3): δ 7.82 (s, IH), 6.70 (s, IH), 5.32 (s, 2H), 5.15 (s, 2H), 3.93 (s, 3H), 3.91 (s, 3H) 3.79 (s, 3H). Example 142: 6-chloro-9-(6-chloro-benzo[l,3]dioxol-5-ylmethyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 5-chloro-6-chloromethyl-benzo[l,3]dioxole according to the general procedure 1.1. HPLC Rt: 5.506 min. 'H-NMR (CDC13): δ 7.81 (s, IH), 6.88 (s, IH), 6.79 (s, IH), 5.98 (s, 2H), 5.25 (s, 2H), 5.13 (s, 2H).
Example 143 : 6-chloro-9-(2,4-dimethoxy-3-methyl-benzyl)-9H-purin-2-yIamine Step 1: l-Bromomethyl-2,4-dimethoxy-3-methyl-benzene The title compound was obtained from (2,4-dimethoxy-3-methyl-phenyι)- methanol according to the general procedure 2.5. Step 2: 6-Chloro-9-(2,4-dimethoxy-3-methyl-benzyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,4-dimethoxy-3-methyl-benzene according to the general procedure 1.1. HPLC Rt: 5.433 min. 'H-NMR (CDCI3): δ 7.76 (s, IH), 7.08-7.06 (d, IH), 6.60- 6.62 (d, IH), 5.20 (s, 2H), 5.07 (s, 2H), 3.82 (s, 3H), 3.72 (s, 3H), 2.17 (s, 3H).
Example 144: 6-Chloro-9-(2-chloro-3,4-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: l-Bromomethyl-2-chloro-3,4-dimethoxy-benzene The title compound was obtained from (2-chloro-3,4-dimethoxy-phenyl)- methanol according to the general procedure 2.5. Step 2: 6-Chloro-9-(2-chloro-3 ,4-dimethoxy-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-chloro-3,4-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.633 min. 'H-NMR (CDC13): δ 7.80 (s, IH), 7.00-6.98 (d, IH), 6.82-6.79 (d, IH), 5.31 (s, 2H), 5.08 (s, 2H), 3.88 (s, 3H), 3.88 (s, 3H). Example 145: 6-chloro-9-(3-methoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-3-methoxybenzene according to the general procedure 1.1. HPLC Rt: 5.136 min. 'H-NMR (CDC13): δ 7.75 (s, IH), 7.30-7.28 (m. IH), 6.88-6.85 (dd, IH), 6.84-6.82 (dd, IH), 6.80-6.79 (m, IH), 5.28 (s, 2H), 5.15 (s, 2H), 3.78 (s, 3H).
Example 146: 6-Chloro-9-(2,6-dibromo-3,5-dimethoxy-benzyl)-9H-purin-2-ylamine Step 1: 2-Bromo-l-chloromethyl-3,5-dimethoxy-benzene and 2,4- dibromo-3 -chloromethyl- 1 , 5-dimethoxy-benzene Bromination of l-chloromethyl-3, 5-dimethoxy-benzene according to the general procedure 3.1 gave a mixture of the two title compounds, which were separated by flash chromatography. ' H-NMR of 2,4-dibromo-3 -chloromethyl- 1 , 5-dimethoxy-benzene (CDC13): δ 6.52 (s, IH), 5.02 (s, 2H), 3.93 (s, 6H). 2-bromo- l-chloromethyl-3, 5- dimethoxy-benzene 'H-NMR (CDCI3): δ 6.67-6.67 (d, IH), 6.47-6.46 (d, IH), 4.80 (s, 2H), 3.85 (s, 3H), 3.82 (s, 3H). Step 2: 6-Chloro-9-(2,6-dibromo-3,5-dimethoxy-benzyl)-9H-purin-2- ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2,4-dibromo-3-chloromethyl-l, 5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 6.022 min. 'H-NMR (CDCI3): δ 7.46 (s, IH), 6.64 (s, IH), 5.64 (s, 2H), 5.14 (s, 2H), 3.99 (s, 6H).
Example 147: 9-(2-Bromo-3,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromo- l-chloromethyl-3, 5-dimethoxy-benzene (see previous example, step 1) according to the general procedure 1.1. HPLC Rt: 6.026 min. 'H-NMR (CDC13): δ 7.82 (s, IH), 6.48-6.47 (d, IH), 6.32-6.32 (d, IH), 5.35 (s, 2H), 5.09 (s, 2H), 3.90 (s, 3H), 3.73 (s, 3H). Example 148 : 6-chIoro-9-(3,5-dimethoxy-benzyl)-9H-purin-2-yIamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-3,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.257 min. 'H-NMR (CDCU): δ 7.79 (s, IH), 6.44-6.42 (t, IH), 6.41-6.39 (d, 2H), 5.22 (s, 2H), 5.15 (s, 2H), 3.80 (s, 6H).
Example 149: N-[6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]-acetamide A solution of 6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine in acetic acid was treated with fuming HNO3 at 0 °C for 15 min. Work-up and preparative TLC (EtOAc:hexane 1:1) gave N-[6-chloro-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-yl]- acetamide. HPLC Rt: 5.744 min. 'H-NMR (CDCI3): δ 8.09 (s, IH), 6.58 (s, 2H), 5.33 (s, 2H), 3.85 (s, 3H), 3.85 (s, 6H), 2.43 (s, 3H).
Example 150: 6-chloro-9-(2,5-dimethoxy-benzyl)-9H-purin-2-yIamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-2,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.291 min. 'H-NMR (CDCI3): δ 7.82 (s, IH), 6.85-6.84 (d, IH), 6.82-6.82 (d, 2H), 5.18 (s, 2H), 5.16 (s, 2H), 3.80 (s, 3H), 3.75 (s, 3H).
Example 151 : 8-bromo-6-chloro-9-(2,5-dimethoxy-benzyI)-9H-purin-2-ylamine The title compound was obtained by bromination of 6-chloro-9-(2,5-dimethoxy- benzyl)-9H-purin-2-ykmine according to the general procedure 1.2. HPLC Rt: 6.150 min. Η-NMR (CDCI3): δ 6.83-6.78 (m, 2H), 6.37-6.36 (d, IH), 5.31 (s, 2H), 5.13 (s, 2H), 3.83 (s, 3H), 3.70 (s, 3H).
Example 152 : 6-chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyT4,5-dimethoxy-2-nitro-benzene according to the general procedure 1.1. HPLC Rt: 5.194 min. 'H-NMR (CDCI3): δ 7.98 (s, IH), 7.74 (s, IH), 6.79 (s, IH), 5.67 (s, 2H), 5.15 (s, 2H), 3.98 (s, 3H), 3.85 (s, 3H). Example 153 : 8-bromo-6-chloro-9-(4,5-dimethoxy-2-nitro-benzyl)-9H-purin-2- ylamine The title compound was obtained by brominating 6-chloro-9-(4,5-dimethoxy-2- nitro-benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 1.2. HPLC Rt: 6.040 min. H-NMR (CDC13): δ 7.74 (s, IH), 6.13 (s, IH), 5.78 (s, 2H), 5.16 (s, 2H), 3.99 (s, 3H), 3.71 (s, 3H).
Example 154: 6-chloro~9-(2,5-dichloro-benzyI)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-l,4-dichloro-benzene according to the general procedure 1.1. HPLC Rt: 5.846 min. 'H-NMR (CDC13): δ 7.82 (s, IH), 7.38-7.36 (d, IH), 7.28-7.26 (dd, IH), 7.18-7.18 (d, IH), 5.32 (s, 2H), 5.17 (s, 2H).
Example 155: 6-chloro-9-(2,3,5-trifluoro-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2,3,5-trifluoro-benzene according to the general procedure 1.1. HPLC Rt 5.414 min. 'H-NMR (CDC13): δ 7.82 (s, IH), 6.98-6.89 (m, IH), 6.82-6.75 (m. IH), 5.30 (s, 2H), 5.13 (s, 2H).
Example 156: (2-amino-6-chloro-purin-9-yl)-(3,4,5-trimethoxy-phenyl)-methanone A solution of 6-chloro-9H-purin-2-ykmine in pyridine was treated with 3,4,5- trimethoxybenzoyl chloride at r.t. for 2 h. Work-up and purification by preparative TLC (EtOAc:hexane 1 : 1) gave the title compound. HPLC Rt: 5.305 min. Η-NMR (CDC13): δ 8.24 (s, IH), 7.13 (s, 2H), 5.36 (s, 2H), 3.99 (s, 3H), 3.88 (s, 6H).
Example 157: N-[9-(2-Bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide A suspension of 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2- ylamine (example 51) in acetic anhydride was treated with a catalytic amount of cone. H S0 at r.t. for 3 h. Work-up and purification by preparative TLC (EtOAc.hexane 9:1) gave the title compound. HPLC Rt: 5.603 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 8.10 (s, IH), 7.00 (s, IH), 5.47 (s, 2H), 3.92 (s, 3H), 3.90 (s, 3H), 3.86 (s, 3H), 2.51 (s, 3H).
Example 158: N-[9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]-N- methyl-acetamide A mixture of N-[9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-yl]- acetamide and NaH in DMF was stirred at r.t. for 15 miή, before adding Mel. Stirring was prolonged for 2 h at 50 °C. Work-up and purification by preparative TLC (EtOAc:hexane 1:1) gave the title compound. HPLC Rt: 6.422 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 6.80 (s, IH), 5.45 (s, 2H), 3.93 (s, 3H), 3.90 (s, 3H), 3.82 (s, 3H), 3.57 (s, 3H), 2.51 (s, 3H).
Example 159: 6-chloro-9-(3,5-dichloro-benzyl)-9H-purin-2-yIamine Step 1: l-Bromomethyl-3,5-dichloro-benzene The title compound was obtained from (3,5-dichloro-phenyl)-methanol according to the general procedure 2.5. Step 2: 6-chloro-9-(3,5-dichloro-benzyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-3,5-dichloro-benzene. HPLC Rt: 6.074 min. 'H-NMR (Acetone-d6): δ 8.12 (s, IH), 7.45-7.43 (t, IH), 7.72-7.42 (d, 2H), 6.30 (s, 2H), 5.40 (s, 2H).
Example 1 0 : 6-chIoro-9-(3,4-dichIoro-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with
4-bromomethyl-l,2-dichloro-benzene according to the general procedure 1.1. HPLC Rt: 5.982 min. 'H-NMR (CDC13): δ 7.76 (s, IH), 7.48-7.45 (d, IH), 7.40-7.39 (d, IH), 7.12- 7.10 (dd, IH), 5.23 (s, 2H), 5.12 (s, 2H).
Example 161 : 8-bromo-6-chloro-9-(3,4-dichloro-benzyl)-9H-purin-2-ylamine The title compound was obtained by bromination of 6-chloro-9-(3,4-dichloro- benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 1.2. HPLC Rt: 6.878 min. 'H-NMR (CDC13): δ 7.45-7.43 (m, 2H), 7.17-7.14 (dd, IH), 5.23 (s, 2H), 5.12 (s, 2H).
Example 162: 6-chloro-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine Chlorination of 6-chloro-9-(3 ,4, 5-trimethoxy-benzyl)-9H-purin-2-ykmine according to the general procedure 3.1 gave a mixture of the title compound and of 6- chloro-9-(2,6-dichloro-3 ,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine. The two compounds were isolated by preparative TLC. HPLC Rt: 5.626 min. 'H-NMR (CDC13): δ 7.83 (s, IH), 6.68 (s, IH), 5.51 (s, 2H), 5.23 (s, 2H), 3.94 (s, 3H), 3.90 (s, 3H), 3.80 (s, 3H). Example 163: 6-chloro-9-(2,6-dichIoro-3,4,5-trimethoxy-benzyI)-9H-purin-2- , ylamine See the previous example. HPLC Rt: 6.099 min. 'H-NMR (CDC13): δ 7.57 (s, IH), 5.48 (s, 2H), 5.12 (s, 2H), 3.99 (s, 3H), 3.92 (s, 6H).
Example 164: 2-amino-9-(2-chloro-3,4,5-trimethoxy-benzyl)-9H-purin-6-ol The title compound was obtained by heating a solution of 6-chloro-9-(2-chloro- 3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine (see example 98) in IN HCl for 4 h. Solvent was evaporated and the residue was washed with EtOAc to give the title compound. HPLC Rt: 4.603 min. 'H-NMR (DMSO-d6): δ 7.82 (s, IH), 6.65 (s, IH), 6.60 (s, 2H), 5.15 (s, 2H), 3.81 (s, 3H), 3.77 (s, 3H), 3.69 (s, 3H). Example 165: 6-bromo-9-(3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by alkylation of 6-bromoguanine with 3- chloromethyl-3,4,5-trimethoxy benzene according to the general procedure 1.1. HPLC Rt: 4.947 min. 'H-NMR (CDC13): δ 7.80 (s, IH), 6.50 (s, 2H), 5.20 (s, 2H), 5.18 (s, 2H), 3.85 (s, 3H), 3.84 (s, 6H). Example 166: 6-bromo-9-(2-bromo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by bromination of 6-bromo-9-(3,4,5- trimethoxy-benzyl)-9H-purin-2-ykmine (see previous example) according to the general procedure 3.1. HPLC Rt: 5.793 min. 'H-NMR (CDC13): δ 7.88 (s, IH), 6.68 (s, IH), 5.33 (s, 2H), 5.19 (s, 2H), 3.93 (s, 3H), 3.90 (s, 3H), 3.79 (s, 3H).
Example 167: 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-ethylsulfanyl-9H-purin-2- ylamine A mixture of 6-bromo-9-(2-bromo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ykmine (see previous example), EtSH, K2C03 and THF was placed in a pressure vessel and heated to 70 °C for 6 h. Work-up and purification by preparative TLC (EtOAc :hexane 1:1) gave the title compound. HPLC Rt: 6.039 min. 'H-NMR (CDCI3): δ 7.72 (s, IH), 6.62 (s, IH), 5.30 (s, 2H), 4.98 (s, 2H), 3.91 (s, 3H), 3.88 (s, 3H), 3.74 (s, 3H), 3.35-3.29 (q, 2H), 1.44-1.41 (t, 3H).
Example 168: 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-methoxy-9H-purin-2-ylamine A solution of 9-(2-bromo-3 ,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-ykmine
(see example 51) in MeOH was treated with MeONa at reflux for 1 h. Work-up and purification by preparative TLC (EtOAc :hexane 1:1) gave the title compound. HPLC Rt: 5.229 min. Η-NMR (CDC13): δ 7.69 (s, IH), 6.58 (s, IH), 5.33 (s, 2H), 4.88 (s, 2H), 4.11 (s, 3H), 3.93 (s, 3H), 3.89 (s, 3H), 3.74 (s, 3H).
Example 169: 9-(2-bromo-3,4,5-trimethoxy-benzyι)-9H-purine-2,6-diamine A solution of 9-(2-bromo-3,4,5-trimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine (see example 51) in MeOH was treated with NH3 (7N in MeOH) in a pressure vessel at 90 °C for 16 h. Work-up and purification by preparative TLC (EtOAc:hexane 3:1) gave the title compound. HPLC Rt: 4.884 min. 'H-NMR (DMSO-d6): δ 7.67 (s, IH), 6.71 (s, 2H), 6.60 (s, IH), 5.84 (s, 2H), 5.17 (s, 2H), 3.80 (s, 3H), 3.76 (s, 3H), 3.66 (s, 3H). Example 170: 6-chloro-9-(2-iodo-3,4,5-trimethoxy-benzyl)-9H-purin-2-ylamine The title compound was obtained by iodination of 6-chloro-9-(3,4,5-trimethoxy- benzyl)-9H-purin-2-ykmine (see example 48) according to the general procedure 3.1. HPLC Rt: 5.887 min. 'H-NMR (CDC13): δ 7.87 (s, IH), 6.67 (s, IH), 5.33 (s, 2H), 5.22 (s, 2H), 3.91 (s, 3H), 3.88 (s, 3H), 3.77 (s, 3H).
Example 171 : 9-(2-bromo-3,5-dimethoxy-4-methoxymethoxy-benzyl)-6-chloro-9H- purin-2-ylamine The title compound was obtained by alkylation of 4-(2-amino-6-chloro-purin-9- ylmethyl)-3-bromo-2,6-dimethoxy-phenol (see example 50) chloromethyl methyl ether according to the general procedure 2.6 (NaOH, THF, r.t.) HPLC Rt: 5.817 min. 'H-
NMR (CDC13): δ 7.90 (s, IH), 6.70 (s, IH), 5.35 (s, 2H), 5.32 (s, 2H), 5.17 (s, 2H), 3.93 (s, 3H), 3.78 (s, 3H), 3.62 (s, 3H).
Example 172 : 9-benzothiazol-2-ylmethyI-6-chloro-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-benzothiazole according to the general procedure 1.1. HPLC Rt: 5.055 min. 'H-NMR (DMSO-d6): δ 8.34 (s, IH), 8.09-8.07 (dd, IH), 7.98-7.96 (d, IH), 7.53- 7.50 (m, IH), 7.47-7.43 (m, IH), 7.01 (s, 2H), 5.81 (s, 2H).
Example 173: 6-chloro-9-(4-methoxy-benzyl)-9H-purin-2-yIamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-chloromethyl-4-methoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.067 min. 'H-NMR (CDC13): δ 7.69 (s, IH), 7.22-7.20 (d, 2H), 6.88-6.86 (d, 2H), 5.22 (s, 2H), 5.17 (s, 2H), 3.79 (s, 3H).
Example 174: 9-(2-bromo-4,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine Step 1: (2-Bromo-4,5-dimethoxy-phenyl)-methanol The title compound was obtained by bromination of (3,4-dimethoxy-phenyl)- methanol according to the general procedure 3.1. 'H-NMR (CDC13): δ 7.03 (s, IH), 7.03 (s, IH), 4.70 (s, 2H), 3.91 (s, 3H), 3.89 (s, 3H) Step 2: l-Bromomethyl-2-chloro-4,5-dimethoxy-benzene The title compound was obtained from (2-bromo-4,5-dimethoxy-phenyl)- methanol according to the general procedure 2.5. 'H-NMR (CDC13): δ 7.03 (s, IH), 6.94 (s, IH), 4.60 (s, 2H), 3.89 (s, 3H), 3.86 (s, 3H) Step 3: 9-(2-Bromo-4,5-dimethoxy-benzyl)-6-chloro-9H-purin-2-ylamine The title compound was obtained by alkylation of 2-amino-6-chloropurine with l-bromomethyl-2-chloro-4,5-dimethoxy-benzene according to the general procedure 1.1. HPLC Rt: 5.458 min. 'H-NMR (CDCI3): δ 7.84 (s, IH), 7.08 (s, IH), 6.93 (s, IH), 5.30 (s, 2H), 5.15 (s, 2H), 3.90 (s, 3H), 3.82 (s, 3H).
Example 175: 6-Chloro-9-(4-iodo-3,5-dimethyl-pyridin-2-ylmethyl)-9H-purin-2- ylamine Step 1: 2,3,5-Collidine-N-oxide The title compound was obtained by oxidation of 2,3,5-collidine according to the general procedure 2.1 (yield 70%). HPLC Rt: 3.964 min. 'H-NMR (CDC13): δ 8.03 (s, IH), 6.90 (s, IH), 2.47 (s, 3H), 2.31 (s, 3H), 2.24 (s, 3H). m z (%) 138.2 (M+l, 100%). Rf (20% MeOH/EtOAc) was 0.35. Step 2: 2,3,5-Trimethyl-4-nitro-pyridine 1-oxide A suspension of 2,3,5-collidine-N-oxide (3.77 g, 28 mmol) in cone. H2S0 (8 mL) was cooled to 0 °C and fuming HN03 (5 mL, 100 mmol) was added dropwise. The resulting transparent solution was stirred at 100 °C for 24 h, cooled to r.t., poured onto ice, and the pH was adjusted to 10. Work-up (CHCI3), drying (MgS0 ), and evaporation gave the title compound, (97% yield, 97% purity). Rf (MeOH/EtOAc 1:9): 0.7. HPLC Rt: 4.756 min. 'H -NMR (CDCI3): δ 8.08 (s, IH), 2.50 (s, 3H), 2.27 (s, 3H), 2.23 (s, 3H). m/z (%) 183.1 (M+l, 100%). Step 3: 2,3, 5-Trimethyl-pyridin-4-ykmine- 1-oxide hydrochloride A suspension of 2,3,5-trimethyl-4-nitro-pyridine 1-oxide (4.2g, 23 mmol) and 10% Pd/C (0.42 g) in cone. aq. HCl EtOH (1 : 11) was treated with H2 (60 psi) at r.t. for 3 h. Filtration and evaporation gave the title compound as a slightly yellow solid. HPLC Rt: 4.756 min. 'H-NMR (DMSO-d6): δ 8.28 (s, IH), 7.24 (s, 2H), 2.50 (s, 3H), 2.12 (s, 3H), 2.11 (s, 3H). m z (%) 153.2 (M+l, 100%). Step 4: 4-Iodo-2,3,5-trimethyl-pyridine- 1-oxide A solution of 2,3,5-Trimethyl-pyridin-4-ykmine-l-oxide hydrochloride (1.9 g, 10 mmol) HBF4 (20 mmol) in water (50 mL) was cooled to 0°C. A solution of NaN02 (0.76 g, 11 mmol) in water (5 mL) was added dropwise to give a dark yellow solution which gradually gave a precipitate within 15 min. Potassium iodide (2.3 g, 1.39 x 10"2 mol) was added slowly in several portion to give a dark brown precipitate. The reaction mixture was stirred at r.t. for 5 min, and then heated to 60 °C for 10 min. The mixture was cooled to r.t. and the pH was adjusted to 10. Work-up (CHC13), drying (MgS04), evaporation, and flash chromatography gave the title compound. HPLC Rt: 5.579 min. 'H-NMR (CDC13): δ 8.07 (s, IH), 2.62 (s, 3H), 2.56 (s, 3H), 2.38 (s, 3H). m/z (%) 264.1 (M+l, 100%). Step 5: Acetic acid 4-iodo-3,5-dimethyl-pyridin-2-ylmethyl ester The title compound was obtained by treating 4-iodo-3,5-dimethyl-pyridine 1- oxide was with Ac20 according to the general procedure 2.2. HPLC Rt: 2.913 min. 1H- NMR (CDC13): δ 8.26 (s, IH), 5.32 (s, 2H), 2.47 (s, 3H), 2.41 (s, 3H), 2.24 (s, 3H). m/z (%) 306.0 (M+l, 100%). Step 6: (4-Iodo-3,5-dimethyl-pyridin-2-yl)-methanol The title compound was obtained by deacetylation of 4-iodo-3,5-dimethyl- pyridin-2-ylmethyl ester according to the general procedure 2.3. HPLC Rt: 3.773 min. 'H-NMR (CDC13): δ 8.15 (s, 1H),4.70 (s, 2H), 2.46 (s, 3H), 2.40 (s, 3H). m/z (%) 264.1 (M+l, 100%). Step 7: 2-Bromomethyl-4-iodo-3,5-dimethyl-pyridine The title compound was obtained from (4-Iodo-3,5-dimethyl-pyridin-2-yl)- methanol according to the general procedure 2.5. HPLC Rt: 5.957 min. 'H-NMR (CDC13): δ 8.14 (s, IH), 4.67 (s, 2H), 2.59 (s, 3H), 2.45 (s, 3H). m/z (%) 326.07 (M+l, 100%), 328.07 (M+l, 100%). Step 8: 6-Chloro-9-(4-iodo-3 ,5-dimethyl-pyridin-2-ylmethyl)-9H-purin- 2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-4-iodo-3,5-dimethyl-pyridine according to the general procedure 1.1. HPLC Rt: 5.361 min. 'H-NMR (CDC13): δ 8.08 (s, IH), 7.86 (s, IH), 5.41 (s, 2H), 5.04 (s, 2H), 2.57 (s, 3H), 2.41 (s, 3H).
Example 176: 6-chloro-9-(4-methyI-quinolin-2-ylmethyl)-9H-purin-2-ylamine Step 1: 2,4-Dimethyl-quinoline 1-oxide: The title compound was obtained by oxidation of 2,4-dimethyl-quinoline according to the general procedure 2.1. HPLC Rt: 4.489 min. 'H-NMR (CDC13): δ, 8.89-8.07 (dd, IH), 8.00-7.97 (dd, IH), 7.82-7.79 (m, IH), 7.69-7.65 (m, IH), 7.20 (s, IH), 2.73 (s, 3H), 2.69 (s, 3H). Step 2: Acetic acid 4-methyl-quinolin-2-ylmethyl ester The title compound was obtained by treating 2,4-dimethyl-quinoline- 1-oxide with Ac20 according to the general procedure 2.2. HPLC Rt: 3.158 min. Rf (EtOAc/Hexane 1:1): 0.8. Step 3: (4-Methyl-quinolin-2-yl)-methanol : The title compound was obtained by deacetyktion of acetic acid 4-methyl- quinolin-2-ylmethyl ester according to the general procedure 2.3. HPLC Rt: 3.715 min. 'H-NMR (CDC13): δ, 8.08-8.06 (dd, IH), 8.00-7.97 (dd, IH), 7.73-7.69 (m, IH), 7.57- 7.54 (m, IH), 7.12 (s, IH), 4.87 (s, 2H), 4.52 (s, IH), 2.70 (s, 3H). Step 4: 2-bromomethyl-4-methyl-quinoline: The title compound was obtained from (4-methyl-quinolin-2-yl)-methanol according to the general procedure 2.5. HPLC Rt: 4.516 min. 'H-NMR (CDC13): δ, 8.07-8.05 (dd, IH), 7.98-7.96 (dd, IH), 7.73-7.69 (m, IH), 7.58-7.54 (m, IH), 7.40 (d, IH), 4.66 (s, 2H), 2.70 (s, 3H). Step 5: 6-chloro-9-(4-methyl-quinolin-2-ylmethyl)-9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-4-methyl-quinoline according to the general procedure 1.1. HPLC Rt: 4.387 min. 'H-NMR (DMSO-d6): δ 8.31 (s, IH), 8.11-8.09 (dd, IH), 7.90-7.88 (dd, IH), 7.77-7.74 ( , IH), 7.66-7.62 (m, IH), 7.27 (s, IH), 6.91 (s, 2H) 5.58 (s, 2H), 2.68 (s, 3H).
Example 177 : 6-bromo-9-(4-methyl-quinolin-2-ylmethyl)-9H-purin-2-yIamine The title compound was obtained by alkylation of 6-bromoguanine with 2- bromomethyl-4-methyl-quinoline (see previous example) according to the general procedure 1.1. HPLC Rt: 4.489 min. 'H-NMR (DMSO-d6): δ 8.27 (s, IH), 8.06-8.04 (dd, IH), 7.85-7.83 (dd, IH), 7.73-7.69 (m, IH), 7.61-7.57 (m, IH), 7.22 (s, IH), 6.89 (s, 2H), 5.52 (s, 2H), 2.64 (s, 3H)
Example 178: 6-bromo-9-(4-methyl-l-oxy-quinolin-2-ylmethyl)-9H-purin-2- ylamine The title compound was obtained by oxidation of 6-bromo-9-(4-methyl-quinolin-
2-ylmethyl)-9H-purin-2-ylamine (see previous example) according to the general procedure 2.1. HPLC Rt: 4.698 min. 'H-NMR (DMSO-d6): δ 8.62-8.60 (dd, IH), 8.27 (s, IH), 8.12-8.10 (dd, IH), 7.88-7.85 (m, IH), 7.79-7.75 (m, IH), 6.93 (s, 2H), 6.89 (s, IH) 5.57 (s, 2H), 2.64 (s, 3H).
Example 179: 6-chIoro-9-(3,5-dimethyl-4-methyIsulfanyl-pyridin-2-ylmethyl)-9H- purin-2-ylamine Step 1: 2,3,5-Trimethyl-4-methylsulfanyl-pyridine 1-oxide A solution of 4-bromo-2,3,5-trimethyl-pyridine 1-oxide in THF was treated in a pressure vessel with NaSMe at 110 °C for 16 h. HPLC Rt: 5.303 min. 'H-NMR (CDC13): δ 8.07 (s, IH), 2.57 (s, 3H), 2.52 (s, 3H), 2.42 (s, 3H), 2.23 (s, 3H). Step 2: Acetic acid 3,5-dimethyl-4-methylsulfanyl-pyridin-2-ylmethyl ester The title compound was obtained by treating 2,3,5-trimethyl-4-methylsulfanyl- pyridine 1-oxide with Ac20 according to the general procedure 2.2. HPLC Rt: 4.341 min. 'H-NMR (CDCI3): δ 8.27 (s, IH), 5.20 (s, 2H), 2.57 (s, 3H), 2.46 (s, 3H), 2.25 (s, 3H), 2.10 (s, 3H). Step 3: (3,5-Dimethyl-4-methylsulfanyl-ρyridin-2-yl)-methanol: The title compound was obtained by deacetyktion of acetic acid 3,5-dimethyl-4- methylsulfanyl-pyridin-2-ylmethyl ester according to the general procedure 2.3. HPLC Rt: 3.921 min. Step 4: 2-Bromomethyl-3,5-dimethyl-4-methylsulfanyl-pyridine: The compound was obtained from (3,5-dimethyl-4-methylsulfanyl-pyridin-2-yl)- methanol according to the general procedure 2.5. HPLC Rt: 4.905 min. 'HNMR (CDCI3): δ 8.26 (s, IH), 4.59 (s, 2H), 2.62 (s, 3H), 2.47 (s, 3H), 2.27 (s, 3H), 2.10 (s, 3H). m/z (%): 246.13 (M+l, 96%), 248.09 (M+3, 100%). Step 5: 6-Chloro-9-(3,5-dimethyl-4-methylsulfanyl-pyridin-2-ylmethyl)- 9H-purin-2-ykmine The title compound was obtained by alkylation of 2-amino-6-chloropurine with 2-bromomethyl-3,5-dimethyl-4-methylsulfanyl-pyridine according to the general procedure 1.1. HPLC Rt: 4.611 min. 'H-NMR (CDCI3): δ 8.24 (s, IH), 7.87 (s, IH), 5.36 (s, 2H), 5.00 (s, 2H), 2.61 (s, 3H), 2.47 (s, 3H), 2.26 (s, 3H).
Example 180: 6-chloro-9-(7-chloro-benzothiazoI-2-ylmethyI)-9H-purin-2-ylamine Step 1: (2,3-dichloro-phenyl)-acetamide A solution of 2,3-dichloroaniline (5.00g, 30.86 mmol) in pyridine (20 ml) was cooled to 0°C and treated with AcCl (4.85 g, 62 mmol). The reaction mixture was stirred at r.t. for 1 h and then concentrated under reduced pressure. The residue was dissolved in ethyl acetate, washed with 1% aqueous hydrochloric acid, water and brine, and dried over MgS04. The solution was concentrated and recrystallized from EtOAc/hexane to give (2,3-dichloro-phenyl)-acetamide (4.50 g, 22 mmol). HPLC Rt: 5.52 min. 'H-NMR (CDC13): δ 8.35 (br. s, IH), 7.7 (IH), 7.24 (IH), 7.23 (IH), 2.28 (s, 3H). Step 2: (2,3-dichloro-phenyl)-thioacetamide A solution of (2,3-dichloro-phenyl)-acetamide (4.50 g, 22 mmol,) in toluene (50 ml) was treated at r.t. with P2S5 (9.80 g, 22 mmol). The reaction mixture was heated to 90 °C for 1.5 h, cooled to r.t., and filtered. The solid was washed with ether and the washings were combined with the filtrate. The combined solutions were extracted twice with 10% aq. NaOH. The combined aqueous extracts were acidified at 0 °C with HCl. The precipitate was collected and recrystallized from ethyl acetate/hexane to afford (2,3- dichloro-ρhenyl)-thioacetamide (3.40 g, 16 mmol). HPLC Rt: 5.91 min. *H- NMR (CDCI3): δ 8.80 (br. s, IH, NH), 8.5 (d, IH), 7.42 (d, IH), 7.30 (t, IH), 2.82 (s, 3H). Step 3: 7-Chloro-2-methyl-benzothiazole A solution of (2,3-dichloro-phenyl)-thioacetamide (3.4 g, 15 mmol) inN-methyl- 2-pynolidinone (25 ml) was treated with NaH (60% oil suspension, 0.74 g, 19 mmol) at r.t. The reaction mixture was heated to 150 °C for 30 min. Work-up (EtOAc), drying (brine, MgS04), evaporation, and purification by flash chromatography afforded the title compound (2.4 g, 13 mmol). HPLC Rt: 6.65 min. 'H-NMR (CDC13): δ 7.87 (d, IH, J = 7.9 Hz, ph-H), 7.44 (t, IH, J = 7.9 Hz, ph-H), 7.35 (d, IH, J = 8.0 Hz, ph-H), 2.87 (s, 3H, CH3). Step 4: 2-Bromomethyl-7-chloro-benzothiazole A mixture of 7-chloro-2-methyl-benzothiazole (1.00 g, 5.45 mmol), N- bromosuccinimide (1.26 g, 7.08 mmol), benzoyl peroxide (0.1 g), and CCI4 (10 mL was heated to reflux under irradiation of a UV lamp for 14 h. The reaction mixture was cooled and filtered to remove the succinimide formed in the reaction, and the filtrate was evaporated to dryness. The resulting solid was purified by flash chromatography to give the title lamp (400 mg, 1.5 mmol). 'H-NMR (CDC13): δ 7.94 (d, IH), 7.47 (t, IH), 7.42 (d, IH), 4.82 (s, 2H, CH2). HPLC Rt: 7.19 min. Step 5: 6-Chloro-9-(7-chloro-benzothiazol-2-ylmethyl)-9H-purin-2- ylamine A mixture of 2-bromomethyl-7-chloro-benzothiazole (60 mg, 0.2286 mmol), 2- amino-6-chloropurine (32 mg, 0.19 mmol), Cs2C03 (67.86 mg, 0.208 mmol), and DMF (2 ml) was heated to 40 °C for 1 h. The reaction was cooled to r.t. and the solvent was removed on a rotary evaporator. The resulting solid was purified by preparative TLC to give the title compound (50 mg, 0.14 mmol). HPLC Rt: 5.81 min. 'H- NMR (CDC13): δ 8.0 (s, IH), 7.95 (d, IH), 7.48 (t, IH), 7.43 (d, IH), 5.69 (s, 2H), 5.17 (s, 2H).
Example 181 : 6-Chloro-9-(3,4,5-trimethyl-pyridin-2-ylmethyI)-9H-purin-2-ylamine Step l: 2,3,5-Collidine-N-oxide See Example 1, Method 1, step 1. Step 2: 4-Bromo-2,3,5-collidine-N-oxide See Example 1, Method 1, step 2. Step 3: 2,3,4,5-Tetramethyl-pyridine 1-oxide 4-Bromo-2,3,5-trimethyl-pyridine 1-oxide (2g, 9.2 mmole) and catalytic tetrakis(triphenylphosphino)-palkdium (80 mg, 4% by wt) in 20 mL of dry THF before treating with trimethykluminum (2M in toluene, 15.2 mmole) under nitrogen. The solution was heated to reflux for 3 h, diluted with toluene (20 mL) before quenching the reaction with 4 mL of methanol followed by ammonium chloride (15 mmole). The mixture was refluxed for 2 h and filtered, while hot, on Celite. See J. Med. Chem. 1999, 42(12), 2064-2086. HPLC Rt: 4.183 min. Η-NMR (CDC13): δ 8.05 (s, IH), 2.55 (s, 3H), 2.27 (s, 3H), 2.22 (s, 3H), 2.20 (s, 3H). Step 4: Acetic acid 3,4,5-trimethyl-pyridin-2-ylmethyl ester The compound was obtained by dissolving in acetic anhydride before bringing the reaction to reflux for 0.5 h as described in the general procedure 2.2. Quenching the reaction with water and extracting with chloroform yielded the titled product. HPLC Rt: 3.843 min. 'H-NMR (CDC13): δ 8.20 (s, IH), 5.22 (s, 2H), 2.26 (s, 3H), 2.25 (s, 3H), 2.21 (s, 3H), 2.11 (s, 3H). Step 5: (3,4,5-Trimethyl-pyridin-2-yl)-methanol The compound was obtained by hydrolysis of acetic acid 3,4,5-trimethyl-pyridin- 2-ylmethyl ester in MeOH and K2C03 at 50 °C for 0.5 h as described in the general procedure 2.3. After removing MeOH, the residue was dissolved in water and extracted with chloroform. HPLC Rt: 3.405 min. 'H-NMR (CDC13): δ 8.18 (s, IH), 5.00 (s, IH), 4.67 (s, 2H), 2.28 (s, 3H), 2.23 (s, 3H), 2.12 (s, 3H). Step 6: 2-bromomethyl-3,4,5-trimethyl-pyridine The compound was obtained from reacting (3,4,5-trimethyl-pyridin-2-yl)- methanol with triphenyl phosphine and carbon tetrabromide in dichloromethane as described in the general procedure 2.5. HPLC Rt: 3.979 min. 'H-NMR (CDC13): δ 8.18 (s, IH), 4.63 (s, 2H), 2.35 (s, 3H), 2.48 (s, 3H), 2.24 (s, 3H). Step 7: 6-Chloro-9-(3,4,5-trimethyl-ρyridin-2-ylmethyl)-9H-purin-2- ylamine The compound was obtained by reacting 2-bromomethyl-3,4,5-trimethyl-pyridine with 6-chloro-9H-purin-2-ykmine in the presence of K2C03 at 50 °C for 0.5 h as described in the general procedure 1.1. HPLC Rt: 3.903 min. 'H-NMR (CDC13): δ 8.18 (s, IH), 7.84 (s, IH), 5.38 (s, 2H), 5.08 (s, 2H), 2.29 (s, 3H), 2.27 (s, 3H), 2.22 (s, 3H).
Example 182: 6-Bromo-9-(3,4,5-trimethyl-pyridin-2-ylmethyl)-9H-purin-2-yIamine The compound was obtained by reacting 2-bromomethyl-3,4,5-trimethyl-pyridine (see example 117) with 6-bromo-9H-purin-2-ykmine in the presence of K2C03 in DMF for 0.5 h at 50 °C as described in the general procedure 1.1. HPLC Rt6: 4.045 min. *H- NMR (CDC13): δ 8.18 (s, IH), 7.85 (s, IH), 5.37 (s, 2H), 5.10 (s, 2H), 2.29 (s, 3H), 2.27 (s, 3H), 2.22 (s, 3H).
Example 183 : 6-Bromo-9-(3,4,5-trimethyI-l-oxy-pyridin-2-ylmethyI)-9H-purin-2- ylamine The compound was obtained by the oxidation of 6-bromo-9-(3,4,5-trimethyl- pyridin-2-ylmethyl)-9H-purin-2-ylamine with m-CPBA in dichloromethane as described in the general procedure 2.1. HPLC Rt: 5.611 min. 'H-NMR (CDC13): δ 9.13 (s, IH), 8.08 (s, IH), 5.91 (s, 2H), 2.70 (s, 3H), 2.27 (s, 3H), 2.22 (s, 3H).
BIOLOGY EXAMPLES
The biological activites of selected aminopurines were determined using four assays: the inhibition of binding of biotinylated geldamamycin (biotin-GM) to rHSP90, the lysate binding ability, the HER2 degradation ability and the cytotoxity measurement. These assays have been described in Examples A, B, C and D in the previous sections. The biological activites are summarized in Table 6. TABLE 6. Biological Activities of Selected Aminopurines of Formula II, Where R3=H
Figure imgf000342_0001
Figure imgf000343_0001
Figure imgf000344_0001
Figure imgf000345_0001
ND = not determined
III. PREPARATION OF PYRAZOLQPYRIMIDINES (FORMULA HI)
A. Materials and Methods The chemical reagents used to create the novel products of the invention below are all available commercially, e.g., from Aldrich Chemical Co., Milwaukee, WI, USA. Otherwise their preparation is facile and known to one of ordinary skill in the art, or it is referenced or described herein. The final compounds were usually purified by preparative TLC (silica gel 60 A, WTiatman Partisil PK6F) or flash chromatography (silica gel 60 A, EMD Chemicals) using EtOAc/hexane or MeOH/CH2Cl2 as eluents. Rfs were measured using silica gel TLC plates (silica gel 60 A, EMD Chemicals). Analytical HPLC chromatograms were obtained using a C18 column (Agilent Zorbax 300SB-C18; 5 microns; 4.6 mm x 150 mm). A gradient was applied between solvent A (0.1% TFA in H20) and solvent B (0.5% TFA in CH3CN) increasing the proportion of A linearly from 5% (t=0) to 100% (t=7.00 min), with a constant flow rate of 1 mL/min. The samples were diluted to typically 0.1-1 mg/mL in MeOH or CH3CN and the injection volumes were typically 10 μL. The column was not heated, and UV detection was effected at 254 nm. 'H-NMR spectra were recorded on a Bruker Avance 400 MHz spectrometer. The chemical names were generated using the Beilstein Autonom 2.1 software.
B. General Procedures 1. General procedures to prepare and manipulate the pyrazoIo[3,4- dl pyrimidine ring General procedure 1.1: Alkylation of pyrazolo[3,4-d]pyrimidines atN-1
Figure imgf000346_0001
4-Chloro-lH-pyrazolo[3,4-d]pyrimidin-6-ykmine was prepared as described in
Seek, F.; Stecker, H. Helv. Chim. Acta 1986, 69, 1602-1613. A suspension of the 4- Chloro- lH-pyrazolo [3 ,4-d]pyrimidin-6-ykmine (1 mmol), benzyl halide (1 mmol) and
K2C03 (1-3 mmol) in dry DMF (5 mL) was stirred at 22-70 °C for 0.5-16 h. Work-up
(EtO c) and purification by preparative TLC or flash chromatography (EtOAc/hexane or
MeOH/CH2Cl2) yielded the pure N-l alkykted product. General procedure 1.2: Preparation of 3-alkyl pyrazolo[3,4- d]pyrimidines Step 1: l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)-ethanol A fine suspension of 2-amino-4,6-dichloro-pyrimidine-5-carbaldehyde (3.0 g, 15 mmol); (Seek, F.; Stecker, H. Helv. Chim. Acta 1986, 69, 1602) in THF was cooled to - 78 °C. A 3M solution of MeMgBr in THF (25 mL, 75 mmol, 5 equiv.) was added over 3 h, keeping the internal temperature at —78 °C. The mixture was stirred for a further 0.5 h, quenched with 100 ml H20, and neutralized with aw. HCl. Extraction (EtOAc) gave 1- (2-amino-4,6-dichloro-pyrimidin-5-yl)-ethanol as a pale yellow solid (2.5 g, 76%) which was used without further purification. Step 2: l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)-ethanone l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)-ethanol (2.0 g, 9.6 mmol) was treated with Mn02 (20 g, 229 mmol, 24 equiv.) in 1,2-dichloroethane for 16 h at 70 °C. Filtration over celite and concentration gave l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)- ethanone as a pale orange solid (1.4 g, 6.7 mmol, 71%), which was used without further purification. Step 3: 4-Chloro-3 -methyl- lH-pyrazolo [3, 4-d]pyrimidin-6-ykmine l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)-ethanone (200 mg, 0.97 mmol) was dissolved in CH2C12 and treated with anhydrous hydrazine (31 mg, 0.97 mmol, 1 equiv.) at r.t. overnight. The precipitate was collected by filtration, washed with CH2C12, dissolved in DMSO (0.5 mL), and partitioned between EtOAc (100 mL) and water (25 mL). The organic layer was dried (brine, Na2S04) and concentrated to afford the title compound as a white solid (95 mg, 0.52 mmol, 53%). 2. General procedures to manipulate the pyridine ring General procedure 2.1 : Preparation of pyridine N-oxides A solution of the pyridine derivative (1.0 mmol) in dichloromethane or chloroform (5 mL) was cooled by means of an ice-bath, treated with m-CPBA (1.1 to 3 mmol) in three portions, and allowed to warm to r.t. The mixture was extracted with dichloromethane and washed with aqueous NaOH, followed by water. Drying (Na2S04) and concentration afforded the pyridine N-oxide. General procedure 2.2: Preparation of 2-(acetoxymethyl)- pyridines A solution of the 2-methyl pyridine N-oxide (1.0 mmol) in acetic anhydride (5 mL) was heated to reflux for 0.5 h. Work-up (EtOAc), drying (MgS04), evaporation and purification by preparative TLC or flash chromatography afforded the 2-(acetoxymethyl) pyridine. General procedure 2.3: Preparation of 2-(hydroxymethyl)- pyridines A suspension of 2-acetoxymethyl-pyridine derivative and solid K2C03 in methanol was heated to 50 °C for 5-30 min. Evaporation, work-up (EtOAc), and drying (MgS0 ) afforded the 2-hydroxymethyl pyridine. General procedure 2.4: Preparation of 2-(bromomethyl)-pyridines A solution of 2-(hydroxymethyl)-pyridine (1.0 mmol) and triphenyl phosphine
(1.2 mmol) in dichloromethane or chloroform (5 mL) was cooled to 0 °C. A solution of CBr4 (1.5 mmol) in dichloromethane or chloroform was added dopwise, and the resulting mixture was stirred at 0 °C for 0.5-1 h. Work-up followed and purification by flash chromatography afforded the 2-(bromomethyl)-pyridine. General procedure 2.5: Preparation of 2-chloropyridines A suspension of 2-(hydroxymethyl)-pyridine (10 g) in POCl (30 mL) was stirred at 110 °C for 1.5 h. The resulting viscous oil was cooled to r.t. and poured onto ice water (500 g). The pH was adjusted to 10 with solid KOH. Work-up (CHC13), drying (MgS04) and evaporation gave the 2-(chloromethyl)-pyridine, usually as a purple oil or solid, which was used without purification. General procedure 2.6: Preparation of pyridinium salts A solution of pyridine was heated in MeOH until it dissolved. A methanolic solution of acid (1.0 equiv of e.g. HCl, MeOH) was added, and the solvent was evaporated to give the pyridinium salt. 3. General procedure to manipulate benzene rings General procedure 3.1: Halogenation of benzene rings. Variant 1 : A solution of the aromatic compound in MeOH/THF/acetate buffer (IN in each AcOH and AcONa) was treated with Br2 (1.3 equiv) at r.t. for 5 min. The excess bromine and solvent were removed on a rotary evaporator. Work-up (CHC13) and flash chromatography afforded the desired bromobenzene. Variant 2: A solution of the aromatic compound (7 mmol) and n- halosuccinimide (NCS, NBS, or NIS, 1.06 equiv) in acetic acid (40 mL) was heated to 40-90 °C for 0.3-1 h. Evaporation, work-up (EtOAc) and flash chromatography afforded the desired halogenated benzene. C. Preparation of intermediates
Example 184. 2-Chloro-l-chloromethyl-3,4,5-trimethoxy-benzene The title compound was obtained by chlorination of 5-chloromethyl-l,2,3- trimethoxy-benzene with NCS according to the general procedure 3.1. 'H-NMR (CDC13): δ 6.82 (s, IH), 4.70 (s, IH), 3.93 (s, 3H), 3.90 (s, 3H) 3.87 (s, 3H).
Example 185. 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethyl-pyridine
Figure imgf000349_0001
Step 1: 2-Chloromethyl-4-methoxy-3,5-dimethylpyridine-l-oxide The title compound was obtained by oxidation of 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine according to the general procedure 2.1. R.t: 4.46 min. 'H-NMR (CDC13): δ 8.05 (s, IH), 4.93 (s, 2H), 3.77 (s, 3H), 2.37 (s, 3H), 2.24 (s, 3H). Step 2: 2-Chloro-6-chloromethyl-4-methoxy-3,5-dimethylpyridine The title compound was obtained by treating 2-chloromethyl-4-methoxy-3,5- dimethylpyridine- 1-oxide with POCl3 according to the general procedure 2.5. R.t: 6.757 min. 'H-NMR (CDCI3): δ 4.64 (s, 2H), 3.79 (s, 3H), 2.35 (s, 3H), 2.33 (s, 3H).
Example 186. 4-CMoro-2-chloromethyl-3,5-dimethyl-pyridine The title compound was obtained by treating 2-chloromethyl-3,5-dimethyl- pyridin-4-ol (Tarbit, et al. WO 99/10326) with POCl3 according in the same manner as the general procedure 2.5 (74% yield). R.t.: 5.54 min. 'H-NMR (CDC13): 8.24 (s, IH), 4.71 (s, 2H), 2.48 (s, 3H), 2.36 (s, 3H).
Example 187. 4-Bromo-2-bromomethyI-3,5-dimethyl-pyridine 4-Bromo-2-bromomethyl-3,5-dimethyl-pyridine was prepared by any of the following three methods:
Method 1
Step 1: 2,3,5-Collidine-N-oxide 2,3,5-Collidine-N-oxide was obtained by oxidation of 2,3,5-collidine according to the general procedure 2.1 in 70% yield. R.t: 3.96 min. 'H-NMR (CDC13): δ 8.03 (s, IH), 6.90 (s, IH), 2.47 (s, 3H), 2.31 (s, 3H), 2.24 (s, 3H). m/z (%) 138.2 (M+l, 100%). Rf (20% MeOH/EtOAc): 0.35. Step 2: 4-Bromo-2,3,5-collidine-N-oxide 2,3,5-collidine-N-oxide (1.3 g, 10 mmol) and K2C03 (2.9 g, 20 mmol) were suspended in 10 mL of CC14. Bromine (1 mL, 20 mmol) was added dropwise, and the reaction mixture was heated to reflux for 2 h. Work-up (EtOAc) and flash chromatography (10% MeOH/EtOAc) afforded the title compound as a solid (1.05 g, 51% yield). R.t: 5.24 min. 'H-NMR (CDC13): δ 8.06 (s, IH), 2.56 (s, 3H), 2.43 (s, 3H), 2.31 (s, 3H). m/z (%) 216.2 (M+l, 100%), 218.2 (M+3, 100%). Rf (20% MeOH/EtOAc): 0.45. Step 3: Acetic acid 4-bromo-3,5-dimethyl-ρyridin-2-yl methyl ester 4-Bromo-2,3,5-collidine-N-oxide (0.25g, 11 mmol) was dissolved in acetic anhydride (5 mL) and the solution was heated to reflux for 30 min. Work-up and flash chromatography (50% Hexane/EtOAc) afforded the title compound (0.27 g, 96% yield). Rf (50% Hexane/EtOAc): 0.70. R.t: 4.76 min. 'H-NMR (CDC13): δ 8.26 (s, IH), 5.27 (s, 2H), 2.46 (s, 3H), 2.41 (s, 3H), 2.14 (s, 3H). Step 4: 4-Bromo-3,5-dimethyl-pyridin-2-yl methanol A suspension of acetic acid 4-bromo-3,5-dimethyl-ρyridin-2-yl methyl ester (0.26 g, 1.0 mmol) and K2C03 (excess) in MeOH (5 mL) was heated to 50 °C for 15 min. Work-up (CHC13), evaporation, and filtration through a silica gel pad (eluent: 100%) EtOAc) gave the title compound as a white solid (0.19 g, 88% yield). Rf (50% Hexane/EtOAc): 0.5. R.t.: 3.80 min. Η-NMR (CDC13): δ 8.23 (s, IH), 4.70 (s, 2H), 2.46 (s, 3H), 2.30 (s, 3H). Step 5: 4-Bromo-2-bromomethyl-3,5-dimethyl-pyridine The title compound was obtained from 4-bromo-3,5-dimethyl-pyridin-2-yl methanol according to the general procedure 2.4. R.t.: 6.32 min. 'H-NMR (CDC1 ): δ 8.22 (s, IH), 4.63 (s, 2H), 2.52 (s, 3H), 2.40 (s, 3H).
Method 2:
Step 1: 2-chloromethyl-3,5-dimethyl-pyridin-4-ol The title compound was obtained by heating 2-chloromethyl-4-methoxy-3,5- dimethyl-pyridine hydrochloride in toluene as described in the patent by Tarbit, et al. WO 99/10326. Step 2: 4-bromo-2-chloromethyl-3,5-dimethyl pyridine A mixture of 2-chloromethyl-3,5-dimethyl-pyridin-4-ol (8.2 g, 47.8 mmol) and POBr3 (60g, 209 mmol) was stirred at 130 °C for 3 h. The resulting viscous oil was cooled to r.t. and poured onto ice water. The pH was adjusted to 10 with solid KOH. Work-up (CHC1 ), drying (MgS04) and evaporation afforded the title compound as a purple solid (8.7 g, 78% yield) which was used without purification. R.t.: 6.03 min. "H- NMR (CDC13): 8.20 (s, IH), 4.62 (s, 2H), 2.50 (s, 3H), 2.38 (s, 3H). Method 3:
4-bromo-2-chloromethyl-3 ,5-dimethyl pyridine A suspension of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine (3.24 g, 14.6 mmol) in PBr3 (8.0 ml, 85.1 mmol, 5.8 equiv.) was heated to 80 °C under nitrogen. A catalytic amount of DMF (0.50 ml, 6.4 mmol, 0.44 equiv.) was added, whereupon the suspension rapidly turned into an orange solution. After 40 min., the reaction was still incomplete as judged by HPLC. The temperature was raised to 110 °C and the reaction was prolonged for 30 min, at which point it was complete. The mixture was poured over ice, made basic with cone. aq. NH4OH and extracted into EtOAc. Washing with water, drying (brine, MgS0 ) and concentration gave the title compound as a pink solid (1.51 g, 44%>) containing 10% of an impurity by "H-NMR. The crude was used without further purification. 'H-NMR (CDC13) δ 8.19 (s, IH), 4.59 (s, 2H), 2.48 (s, 3H), 2.37 (s, 3H).
D. Preparation of final compounds
Example 188. 4-Chloro-l-(3,4,5-trimethoxy-benzyl)-lH-pyrazoIo[3,4-d]pyrimidin- 6-ylamine The title compound was obtained by alkylation of 4-chloro-lH-pyrazolo[3,4- d]pyrimidin-6-ykmine (See, F. Seek, Heterocycles 1985, 23, 2521; F. Seek, Helv. Chim. Acta 1986, 69, 1602; R. O. Dempcy, PCT Publication No. WO 03/022859) with 5-chloromethyl-l,2,3-trimethoxy-benzene according to the general procedure 1.1. R.t. 5.68 min. Η-NMR (CDC13) δ 7.93 (s, IH), 6.59 (s, 2H), 5.37 (br. s., 4H), 3.84 (s, 6H), 3.82 (s, 3H). ' Example 189. 4-Chloro-l-(2-chIoro-3,4,5-trimethoxy-benzyI)-lH-pyrazolo [3,4- d] pyrimidin-6-yIamine The title compound was obtained by alkylation of 4-chloro-lH-pyrazolo[3,4- d]pyrimidin-6-ykmine with 2-chloro-l-chloromethyl-3,4,5-trimethoxy-benzene according to the general procedure 1.1. R.t. 6.44 min. 'H-NMR (CDC13) δ 7.95 (s, IH), 6.36 (s, IH), 5.51 (s, 2H), 5.24 (br. s, 2H), 3.90 (s, 3H), 3.86 (s, 3H), 3.70 (s, 3H).
Example 190. 4-Chloro-l-(4-methoxy-3,5-dimethyl-pyridin-2-yImethyι)-lH- pyrazoIo[3,4-d]pyrimidin-6-ylamine A mixture of 4-chloro-lH-pyrazolo[3,4-d]pyrimidin-6-ykmine (1.76 g), 2- chloromethyl-4-methoxy-3,5-dimethyl-pyridine hydrochloride (3.70 g), K2C03 (5.17 g), and DMF (20 ml) was heated to 80 °C for 30 min, diluted with EtOAc, washed with water and brine, concentrated, and purified by flash chromatography to give the title compound as a white solid (0.57 g). R.t. 4.46 min. 'H-NMR (CDC13) δ 8.10 (s, IH), 7.89 (s, IH), 5.53 (2H), 5.24 (br. s, 2H), 3.74 (s, 3H), 2.27 (s, 3H), 2.22 (s, 3H).
Example 191. 4-Chloro-l-(6-chloro-4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)- lH-pyrazolo [3,4-d]pyrimidin-6-ylamine A mixture of 4-chloro-lH-pyrazolo[3,4-d]pyrimidin-6-ykmine (124 mg), Cs2C03 (392 mg) and crude 2-chloro-6-chloromethyl-4-methoxy-3,5-dimethyl-pyridine (200 mg) in DMF (2 ml) was heated to 80 °C for 1 h, diluted with EtOAc and washed with water. Concentration and purification by preparative TLC (EtOAc) gave the title compound. Rt. 6.43 min. 1H-NMR (CDC13) δ 7.86 (s, IH), 5.48 (s, 2H), 5.37 (s, 2H), 3.71 (s, 3H), 2.27 (s, 3H), 2.15 (s, 3H).
Example 192. 4-Chloro-l -(4-chloro-3,5-dimethyl-pyridin-2-ylmethyl)-lH- pyrazolo[3,4-d]pyrimidin-6-ylamine A mixture of 4-chloro- 1 H-pyrazolo [3 ,4-d]pyrimidin-6-ykmine (158 mg), crude
4-chloro-2-chloromethyl-3,5-dimethyl-pyridine (204 mg), Cs2C03 (660 mg) and DMF was heated to 80 °C for 1.5 h, diluted with EtOAc and washed with water. The crude material was concentrated and suspended in MeOH/DCM. Filtration gave a 2:1 mixture of regioisomers which was further purified by preparative silica gel plate (EtOAc 100%). The major (less polar) isomer corresponded to the title compound. R.t. 5.45 min. "H- NMR (CDC13) δ 8.22 (s, IH), 7.90 (s, IH), 5.57 (s, 2H), 5.28 (s, 2H), 2.43 (s, 3H), 2.31 (s, 3H).
Example 193. 4-Chloro-l-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-lH- pyr azolo [3,4-d] pyrimidin-6-ylamine A solution of 4-chloro- 1 -(4-methoxy-3 , 5 -dimethyl-pyridin-2-ylmethyl)- 1 H- pyrazolo[3,4-d]pyrimidin-6-ylamine (50 mg) in CH2C12 (2 ml) was treated withm-CPBA (90 mg) for 10 min, diluted with CH2C12, washed with sat. aq. NaHC03,concentrated and re-crystallized from CHCl3/MeOH to give the title compound as a white solid. R.t. 4.87 min. 'H-NMR (DMSO-d6) δ 8.06 (s, IH), 7.89 (s, IH), 7.36 (s, 2H), 5.55 (s, 2H), 3.72 (s, 3H), 2.30 (s, 3H), 2.18 (s, 3H).
Example 194. 4-Chloro-l-(3,4-dichloro-benzyl)-lH-pyrazolo [3,4-d]pyrimidin-6- ylamine The title compound was obtained by alkylation of 4-chloro- lH-pyrazolo [3,4- d]pyrimidin-6-ykmine wit 4-bromomethyl-l,2-dichloro-benzene according to general procedure 1.1. R.t. 6.89 min. * H-NMR (CDCI3) δ 7.90 (s, IH), 7.39-7.37 (m, 2H), 7.26 (dd, IH), 5.37 (s, 2H), 5.20 (br. s, 2H).
Example 195. 4-Chloro-l-(2,5-dimethoxy-benzyl)-lH-pyrazolo [3,4-d]pyrimidin-6- ylamine The title compound was obtained by alkylation of 4-chloro-lH-pyrazolo[3,4- d]pyrimidin-6-ykmine with 2-chloromethyl-l,4-dimethoxy-benzene according to general procedure 1.1. Rt. 6.06 min. 'H-NMR (CDCI3) δ 7.94 (s, IH), 6.85 (d, IH), 6.75 (dd, IH), 6.42 (dd, IH), 5.48 (s, 2H), 5.24 (s, 2H), 3.82 (s, 3H), 3.70 (s, 3H). Example 196. 4-Chloro-l-(4,5-dimethoxy-2-nitro-benzyI)-lH-pyrazolo [3,4- d] py r imidin-6-ylamine The title compound was obtained by alkylation of 4-chloro- 1 H-pyrazolo [3 ,4- d]pyrimidin-6-ykmine with l-bromomethyl-4,5-dimethoxy-2-nitiO-benzene according togeneral procedure 1.1. R.t. 5.99 min. 'H-NMR (DMSO-d6) δ 8.06 (s, IH), 7.71 (s, IH), 7.38 (br. s, 2H), 6.57 (s, IH), 5.71 (s, 2H), 3.86 (s, 3H), 3.68 (s, 3H).
Example 197. l-(4-Bromo-3,5-dimethyl-pyridin-2-ylmethyI)-4-chloro-lH- pyr azolo [3,4-d] pyrimidin-6-yIamine The title compound was obtained by alkylation of 4-chloro- 1 H-pyrazolo [3 ,4- d]pyrimidin-6-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl-pyridine according to general procedure 1.1. R.t. 5.64 min. 1H-NMR (CDC13) δ 8.20 (s, IH), 7.92 (s, IH), 5.61 (s, 2H), 5.21 (br. s, 2H), 2.50 (s, 3H), 2.37 (s, 3H).
Example 198. l-(4-Bromo-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-4-chloro-lH- pyr azolo [3,4-d] pyrimidin-6-ylamine The title compound was obtained by oxidation of 1 -(4-bromo-3 , 5-dimethyl- pyridin-2-ylmethyl)-4-chloro- 1 H-pyrazolo [3 ,4-d]pyrimidin-6-ykmine with m-CPB A according to general procedure 2.1. R.t. 5.57 min. 'H-NMR (CDC13) δ 8.23 (s, IH), 7.90 (s, IH), 7.38 (s, 2H), 5.64 (s, 2H), 2.50 (s, 3H), 2.30 (s, 3H).
Example 199. 4-Chloro-l-(2,3,6-triflιιoro-benzyl)-lH-pyrazolo [3,4-d]pyrimidin-6- ylamine The title compound was obtained by alkylation of 4-chloro- 1 H-pyrazolo [3,4- d]pyrimidin-6-ykmine with 2-bromomethyl-l,3,4-trifluoro-benzene according to general procedure 1.1. R.t. 7.12 min. Η-NMR (CDC13) δ 7.89(s, IH), 7.25-7.05 (m, IH), 6.95- 6.85 (m, IH), 5.53 (s, 2H), 5.49 (br. s, 2H). Example 200. l-(2-Amino-4,6-dichloro-pyrimidin-5-yl)-ethanoI The title compound was obtained by treatment of 2-Amino-4-chloro-pyrimidine- 5-carbaldehyde with MeMgBr according to general procedure 1.2. Rt. 4.19 min. !H- NMR (DMSO-dg) δ 7.38 (s, IH), 5.18 (bs, 2H), 5.15 (m, IH), 3.56 (d, 3H).
Example 201. l-(2-Amino-4,6-dichIoro-pyrimidin-5-yI)-ethanone
Figure imgf000356_0001
The title compound was obtained by treatment of l-(2-Amino-4,6-dichloro- pyrimidin-5-yl)-ethanol with Mn02 according to general procedure 1.2. R.t. 5.23 min. 'H-NMR (DMSO-de) δ 7.90 (s, 2H), 2.52 (s, 3H).
Example 202. 4-Chloro-3-methyl-lH-pyrazoIo[3,4-d]pyrimidin-6-ylamine
Figure imgf000356_0002
The title compound was obtained by treatment of l-(2-Amino-4,6-dichloro- pyrimidin-5-yl)-ethanone with hydrazine according to general procedure 1.2. R.t. 4.61 min. 'H-NMR (DMSO-d6) δ 11.82 (s, IH), 8.16 (bs, 2H), 2.46 (s, 3H).
Example 203. 4-Chloro-3-ethyl-lH-pyrazolo[3,4-d]pyrimidin-6-ylamine The title compound was obtained by treating 2-amino-4,6-dichloro-pyrimidine- 5-carbaldehyde by sequentially with EtMgCl, Mn02, and hydrazine according to general procedure 1.2. R.t. 4.55 min. Η-NMR (DMSO-d6) δ 12.84 (s, IH), 7.07 (s, 2H), 2.85 (m, 2H), 1.27-1.23 (m, 3H). Example 204. 4-ChIoro-3-isopropyl-lH-pyrazolo [3,4-d]pyrimidin-6-ylamine
Figure imgf000357_0001
The title compound was obtained by treating 2-amino-4,6-dichloro-pyrimidine-5- carbaldehyde sequentially with i-PrMgCl, Mn02 and hydrazine according to general procedure 1.2. R.t. 6.10 min. 'H-NMR (DMSO-d6) δ 12.86 (s, IH), 7.06 (s, 2H), 1.29 (d, 6H).
Example 205. 4-Chloro-3-phenyl-lH-pyrazolo [3,4-d]pyrimidin-6-ylamine
Figure imgf000357_0002
The title compound was obtained by treating 2-amino-4,6-dichloro-pyrimidine-5- carbaldehyde sequentially with PhMgCl, Mn02 and hydrazine according to general procedure 1.2. R.t. 6.04 min. 'H-NMR (DMSO-d6) δ 13.04 (s, IH), 7.70 (m, 2H), 7.46 (m, 3H), 7.19 (bs, 2H).
Example 206. 4-Chloro-l-(4-methoxy-3,5-dimethyl-pyridin-2-yImethyl)-3-methyl- lH-pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000357_0003
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1H- pyrazolo [3 ,4-d]pyrimidin-6-ykmine with 2-chloromethyl-4-methoxy-3 , 5-dimethyl- pyridine according to general procedure 1.1. R.t. 6.72 min. 'H-NMR (CDCI3) δ 8.20 (s, IH), 5.47 (s, 2H), 5.26 (s, 2H), 3.76 (s, 2H), 2.58 (s, 3H), 2.30 (s, 3H), 2.23 (s, 3H).
Example 207. l-(4-Bromo-3,5-dimethyI-l-oxy-pyridin-2-ylmethyl)-4-chloro-3- methyl-lH-pyrazoIo [3,4-d] pyrimidin-6-ylamine
Figure imgf000358_0001
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl- pyridine 1-oxide according to general procedure 1.1. R.t. 5.90 min. 'H-NMR (DMSO- dβ) δ 8.25 (s, IH), 7.29 (s, 2H), 5.53 (s, 2H), 2.45 (s, 3H), 2.36 (s, 3H), 2.28 (s, 3H).
Example 208. 4-ChIoro-l-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-yImethyl)-3- methyl-lH-pyrazoIo[3,4-d]pyrimidin-6-ylamine
Figure imgf000358_0002
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1 H- pyrazolo[3,4-d]pyrimidin-6-ykmine with4-chloro-2-chloromethyl-3,5-dimethyl- pyridine 1-oxide according to general procedure 1.1. R.t. 5.90 min. "H-NMR (DMSO- d6) δ 8.25 (s, IH), 7.30 (s, 2H), 5.54 (s, 2H), 2.45 (s, 3H), 2.36 (s, 3H), 2.28 (s, 3H). Example 209. 4-ChIoro-l-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyl)-3-methyl-lH- pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000359_0001
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl- pyridine according to general procedure 1.1. R.t. 5.63 nxin. 'H-NMR (CDC13) δ 8.23 (s, IH), 5.51 (s, 2H), 5.28 (br.s 2H), 2.57 (s, 3H), 2.45 (s, 3H), 2.33 (s, 3H).
Example 210. 4-Chloro-3-methyl-l-(3,4,5-trimethoxy-benzyl)-lH-pyrazoIo [3,4- d] pyrimidin-6-ylamine
Figure imgf000359_0002
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 5-chloromethyl-l ,2,3-trimethoxy-benzene according to general procedure 1.1. R.t. 6.72 min. Η-NTMR (DMSO-d6) δ 7.30 (s, 2H), 6.57 (s, 2H), 5.22 (s, 2H), 3.71 (s, 6H), 3.62 (s, 3H), 2.47(s, 3H), 2.29 (s, 3H).
Example 211. l-(4-Bromo-3,5-dimethyl-pyridin-2-ylrnethyI)-4-chloro-3-methyl-lH- pyrazo!o[3,4-d]pyrimidin-6-ylamine
Figure imgf000359_0003
The title compound was obtained by alkylation of 4-chloro-3 -methyl- 1 H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 4-bromo-2-chloromethyl-3,5-dimethyl- pyridine according to general procedure 1.1. R.t. 5.90 min. ' H-NMR (DMSO-d6) δ 8.15 (s, IH), 7.22 (s, IH), 5.46 (s, 2H), 2.42 (s, 6H), 2.30 (s, 3H).
Example 212. 4-ChIoro-3-ethyI-l-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-lH- pyr azolo [3,4-d] pyrimidin-6-yIamine
Figure imgf000360_0001
The title compound was obtained by alkylation of 4-chloro-3 -ethyl- 1H- pyrazolo [3 ,4-d]pyrimidin-6-ykmine with 2-chloromethyl-4-methoxy-3 , 5-dimethyl- pyridine according to general procedure 1.1. R.t. 6.02 min. 'H-NMR (DMSO) δ 8.04 (s,lH), 7.19 (br. s, 2H), 5.39 (s, 2H), 3.71(s, 3H), 2.87-2.81 (m, 2H), 2.22 (s, 3H), 2.16 (s, 3H), 1.21(m, 3H).
Example 213. 4-Chloro-l-(4-chloro-3,5-dimethyl-pyridin-2-ylmethyI)-3-ethyl-lH- pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000360_0002
The title compound was obtained by alkylation of 4-chloro-3 -ethyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 4-chloro-2-chloromethyl-3,5-dimethyl- pyridine according to general procedure 1.1. R.t. 6.90 min. "H-NMR (DMSO-d6) δ 8.18 (s IH), 7.21 (s, IH), 5.47 (s, 2H), 2.87-2.81 (m, 2H), 2.39 (s, 3H), 2.27 (s, 3H), 1.21 (m, 3H). Example 214. 4-Chloro-3-isopropyl-l-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-lH-pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000361_0001
The title compound was obtained by alkylation of 4-chloro-3 -isopropyl- 1 -(4- methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-lH-pyrazolo[3,4-d]pyrimidin-6-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine according to the general procedure 1.1. Rt. 5.75 min. 'H-NMR (DMSO-d6) δ 8.02 (s, IH), 7.17 (br. s, IH), 5.40 (s, 2H), 3.71 (s, 3H), 2.23 (s, 3H), 2.16 (s, 3H), 1.26 (d, 6H).
Example 215. 4-Chloro-l-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)-3-phenyI- lH-pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000361_0002
The title compound was obtained by alkylation of 4-chloro-3 -phenyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethyl- pyridine according to general procedure 1.1. R.t. 5.89 min. 'H-NMR (DMSO-d6) δ 8.06 (s, IH), 7.68-7.66 (m, 2H), 7.47-7.45 (m, 3H), 7.32 (br.s, 2H), 5.52 (s, 2H), 3.72 (s, 3H), 2.27 (s, 3H), 2.16 (s, 3H). Example 216. 4-Chloro-l-(4-chloro-3,5-dimethyI-pyridin-2-ylmethyl)-3-phenyl-lH- pyrazolo[3,4-d]pyrimidin-6-ylamine
Figure imgf000362_0001
The title compound was obtained by alkylation of 4-chloro-3 -phenyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 2-chloromethyl-4-methoxy-3,5-dimethyl- pyridine according to general procedure 1.1. Rt. 6.80 min. Η-NMR (DMSO-d6) δ 8.20 (s, IH), 7.67-7.65 (m, 2H), 7.47-7.45 (m, 3H), 7.34 (br.s, 2H), 5.61 (s, 2H), 2.43 (s, 3H), 2.27 (s, 3H).
Example 217. l-(4-Bromo-3,5-dimethyl-pyridin-2-ylmethyl)-4-chloro-3-phenyl-lH- pyr azolo [3,4-d] pyrimidin-6-ylamine
Figure imgf000362_0002
The title compound was obtained by alkylation of 4-chloro-3 -phenyl- 1H- pyrazolo[3,4-d]pyrimidin-6-ykmine with 4-bromo-2-chloromethyl-3 ,5-dimethyl- pyridine according to general procedure 1.1. Rt. 7.41 min. ' H-NMR (DMSO-d6) δ 8.15 (s, IH), 7.67 (m, 2H), 7.46 (m, 3H), 7.34 (br. s, 2H), 5.62 (s, 2H), 2.4 (s, 3H), 2.3 (s, 3H). Example 218. 4-Chloro-l-(4-chloro-3,5-dimethyl-l-oxy-pyridin-2-ylmethyl)-3- phenyl-lH-pyrazoIo[3,4-d]pyrimidin-6-ylamine The title compound was obtained by alkylation of 4-chloro-3 -phenyl- 1H- pyrazolo [3 ,4-d]pyrimidin-6-ykmine with 4-chloro-2-chloromethyl-3 , 5-dimethyl- pyridine 1-oxide according to general procedure 1.1. R.t. 7.50 min. ^-NMR (DMSO- d6) δ 8.25 (s, IH), 7.57 (s, 2H), 7.42 (m, 5H), 5.67 (s, 2H), 2.49 (s, 3H), 2.26 (s, 3H).
BIOLOGY EXAMPLES
The biological activites of selected pyrazolopyrimidines were determined using four assays: the inhibition of binding of biotinylated geldamamycin (biotin-GM) to rHSP90, the lysate binding ability, the HER2 degradation ability and the cytotoxity measurement. These assays have been described in Examples A, B, C and D in the previous sections. The biological activites are summarized in Table 7.
TABLE 7. Biological Activities of Pyrazolopurimidine
Figure imgf000363_0001
Figure imgf000364_0001
Figure imgf000365_0001
Figure imgf000366_0001
ND = not determined
IV. PREPARATION OF TRIAZOLQPYRIMIDINES OF FORMULA IV
A. Materials and Methods The chemical reagents used to create the novel products of the invention below are all available commercially, e.g., from Aldrich Chemical Co., Milwaukee, WI, USA. Otherwise their preparation is facile and known to one of ordinary skill in the art, or it is referenced or described herein. The final compounds were usually purified by preparative TLC (silica gel 60 A, Whatman Partisil PK6F) or flash chromatography (silica gel 60 A, EMD Chemicals) using EtOAc/hexane or MeOH/CH2Cl2 as eluents. Rfs were measured using silica gel TLC plates (silica gel 60 A, EMD Chemicals). Analytical HPLC chromatograms were obtained using a C18 column (Agilent Zorbax 300SB-C18; 5 microns; 4.6 mm x 150 mm). A gradient was applied between solvent A (0.1 %> TFA in H20) and solvent B (0.5% TFA in CH3CN) increasing the proportion of A linearly from 5% (t=0) to 100% (t=7.00 min), with a constant flow rate of 1 mL/min. The samples were diluted to typically 0.1-1 mg/mL in MeOH or CH3CN and the injection volumes were typically μL. The column was not heated, and UV detection was effected at 254 nm. Η-NMR spectra were recorded on a Bruker Avance 400 MHz spectrometer. The chemical names were generated using the Beilstein Autonom 2.1 software. B. General Procedures
Figure imgf000367_0001
General Procedure 1: Displacement of chlorine with amines Ref: Helv. Chim Acta. 1986, 69, 1602-1613; US patent 5,917,042) A mixture of benzykmine derivative or aminomethyl pyridine derivative (5.88 mmole, 2.1 equivalents), triethykmine (1ml, 7.2 mmole) and 4,6-dichloro-pyrimidine-
2,5-diamine (0.5 g, 2.8 mmole), was refluxed in n-BuOH or ethanol (10 mis) for 3 to 18 hours. The mixture was cooled to room temperature and was extracted with CH2C12. The organic layer was washed with water and dried with MgS04 to afford the crude product. The pyridinyl derivatives were purified by chromatography (100% EtOAc-10%
MeOH/ EtOAc), whereas the benzylderivatives were used without further purification. General Procedure 2: Cyclization to form triazolopyrimidine ring system To a solution of 6-chloro-N -benzyl-pyrimidine-2,4,5-triamine derivatives or 6- chloro-N -pyridin-2-ylmethyl-pyrimidine-2,4,5-triamine derivatives (0.57 mmole) in 25%HOAc/H20, an aqueous solution of NaN02 (1.2 equivalents, 1ml) was added dropwise at 0°C. The reaction mixture was stirred for 15 minutes at room temperature and filtered the crude product and purified by column chromatography using 75%EtOAc/Hexanes-100% EtOAc. General Procedure 3: Aromatic ring halogenation A mixture of 7-chloro-3-benzyl-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine derivatives (0.57 mmole) and NCS (N-chlorosuccinimide) or NBS (N- bromosuccinimide) or NIS (N-iodosuccinimide) (1.5 equivalents) in 10 mis HOAc was stirred at 50 °C for 1 to 15 hours to afford the crude corresponding halogenated product which was purified by chromatography (50-75% EtOAc/Hexanes). General Procedure 4: N-oxide formation A solution of the pyridine derivative (1 mmol) in dichloromethane or chloroform (5 mL) was cooled by means of an ice-bath, treated with m-CPBA (1.1 to 3 mmol) in three portions, and allowed to warm to r.t. The mixture was extracted with dichloromethane and washed with aqueous NaOH, followed by water. Drying (Na2S0 ) and concentration afforded the pyridine N-oxide.
Example 219. 7-Chloro-3-(4-methoxy-3,5-dimethylpyridin-2-yl)-3H- [1 ,2,3] triazolo [4,5-d] pyrimidin-5-ylamine Step 1: Synthesis of 2-aminomethyl-4-methoxy-3,5-dimethylpyridine: A solution of 2-chloromethyl-4-methoxy-3,5-dimethyl-pyridine HCl (Aldrich 3.7g, 16.6 mmole) in 7N NH3/MeOH (Aldrich, 200mls) was refluxed in a steel bomb for 15 hours. Removed the solvent under reduced pressure, the residue was taken into 5% MeOH/CH2Cl2 and filtering it through a thin layer of silica gel afforded the product at 76% yield. HPLC RT was 2.850 min. *HNMR (CDC13) δ 8.18 (s, IH), 4.32 (s, 2H), 3.76 (s, 3H), 2.23 (s, 3H), 2.18 (s, 3H). Step 2: Synthesis of 6-chloro-N4-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-pyrimidine-2,4,5-triamine A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and 2-aminomethyl-4- methoxy-3,5-dimethyl-pyridine was heated to reflux in n-BuOH for 3 h, following the general procedure 1. HPLC RT was 3.597 min. 'HNMR (CDC13) δ 8.22 (s, IH), 7.12 (br. t, IH), 4.61 (s, 2H), 4.56-4.55 (d, 2H), 3.80 (s, 3H), 3.00 (s, 2H), 2.29 (s, 3H), 2.27 (s, 3H). Step 3: Synthesis of 7-chloro-3-(4-methoxy-3,5-dimethyl-pyridin-2- ylmethyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine A solution of 6-chloro-N4-(4-methoxy-3,5-dimethyl-pyridin-2-ylmethyl)- pyrimidine-2,4,5-triamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. HPLC RT was 3.597 min. 'HNMR (CDCI3): δ 8.22 (s, IH), 7.12 (broad t, IH), 4.61 (s, 2H), 4.56-4.55 (d, 2H), 3.80 (s, 3H), 3.00 (s, 2H), 2.29 (s, 3H), 2.27 (s, 3H). Example 220. 7-Chloro-3-(4-methoxy-3,5-dimethyl-l-oxy-pyridin-2-yl)-3H- [l,2,3]triazoIo[4,5-d]pyrimidin-5-ylamine The compound was obtained by oxidation of 7-Chloro-3-(4-methoxy-3,5- dimethyl-pyridin-2-ylmethyl)-3H-[ 1 ,2,3]triazolo[4,5-d]pyrimidin-5-ykmine (see Example 1) with m-CPBA (m-chloroperoxybenzoic acid) in methylene chloride, following the general procedure 4. HPLC RT was 4.780 min. 'HNMR (CDC13) δ 8.02 (s, IH), 5.90 (s, 2H), 5.61 (s, 2H), 3.81 (s, 3H), 2.54 (s, 3H), 2.25(s, 3H).
Example 221. 7-Chloro-3-(4-methoxy-benzyl)-3H-[l,2,3]triazoIo[4,5-d]pyrimidin-5- ylamine Step 1: Synthesis of 6-chloro-N4-(4-methoxy-benzyl)-pyrimidine-2,4,5- triamine: A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and l-aminomethyl-4- methoxybenzene was refluxed in n-BuOH for 15 h, following the general procedure 1. HPLC RT was 4.675 min. 'HNMR (CDC13) δ 7.29-7.27 (d, 2H), 6.91-6.89 (d, 2H), 5.62 (br. t, IH) 4.67 (s, 2H), 4.56-4.54 (d, 2H), 3.84 (s, 3H), 2.74 (s, 2H). Step 2: Synthesis of 7-chloro-3-(4-methoxy-benzyl)-3H- [ 1 ,2,3]triazolo[4,5-d]pyrimidin-5-ykmine: A solution of 6-chloro-N4-(4-methoxy-phenyl)-pyrimidine-2,4,5-triamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. HPLC RT was 5.784min. 'HNMR (CDC13): δ 7.37-7.35 (d, 2H), 6.86-6.84 (d, 2H), 5.57 (s, 2H), 5.39 (s, 2H), 3.78 (s, 3H).
Example 222. Synthesis of 7-chloro-3-pyridin-2-ylmethyI-3H-[l,2,3]triazolo[4,5- d] pyrimidin-5-ylamine Step 1: 6-chloro-N4-pyridin-2-ylmethyl-pyrimidine-2,4,5-triamine A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and 2-aminomethyl-pyridine was refluxed in n-BuOH for 15 h, following the general procedure 1. HPLC RT was 2.573 min. 'HNMR (CDC13) δ 8.60-8.59 (m, IH), 7.69-7.66 (m, IH), 7.31-7.29 (m, IH), 7.25-7.20 (m, IH), 6.55 (br. t, IH) 4.63 (s, 2H), 4.73-4.71 (d, 2H), 1.84 (s, 2H). Step 2: Synthesis of 7-chloro-3-pyridin-2-ylmethyl-3H- [ 1 ,2,3]triazolo[4,5-d]pyrimidin-5-ykmine: A solution of 6-chloro-N4-pyridin-2-ylmethyl-pyrimidine-2,4,5-triamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. 'HNMR (CDC13): δ 8.60-8.59 (m, IH), 7.71-7.67(m, IH), 7.29-7.25 (m, IH), 7.22-7.20 (m, IH), 5.81 (s, 2H), 5.48 (s, 2H).
Example 223. Synthesis of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine Step 1: 6-chloro-N4-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,4,5-triamine A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and l-aminomethyl-3,4-5- trimethoxybenzene in n-BuOH for 15 h, following the general procedure 1. HPLC RT was 4.458 min. 'HNMR (CDC13) δ 6.58 (s, 2H), 5.62 (br. t, IH) 4.72 (s, 2H), 4.56-4.54 (d, 2H), 3.88 (s, 6H), 3.86 (s, 3H), 2.77 (s, 2H). Step 2: Synthesis of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H- [1 ,2,3]triazolo[4,5-d]pyrimidin-5-ykmine) : A solution of 6-chloro-N4-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,4,5-triamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. HPLC RT was 5.755min. 'HNMR (CDC13): δ 6.66 (s, 2H), 5.55 (s, 2H), 5.42 (s, 2H), 3.83 (s, 3H), 3.80 (s, 6H).
Example 224. Synthesis of 7-chloro-3-(2-chIoro-3,4,5-trimethoxy-benzyI)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine Chlorination of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H-[l,2,3]triazolo[4,5- d]pyrimidin-5-ykmine) (CF 2137) with NCS (1.5 equivalents) was done following the general procedure 3 to give 7-chloro-3-(2-chloro-3,4,5-trimethoxy-benzyll)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine: HPLC RT was 6.244min. 'HNMR (CDCI3): δ 6.53 (s, IH), 5.70 (s, 2H), 5.48 (s, 2H), 3.89 (s, 3H), 3.87 (s, 3H), 3.75 (s,3H). Example 225. 7-Chloro-3-(2,6-dichloro-3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine Chlorination of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H-[l ,2,3]triazolo[4,5- d]pyrimidin-5-ylamine) with NCS (1.5 equivalents) was done following the general procedure 3 to give 7-Chloro-3-(2,6-dichloro-3,4,5-trimethoxy-benzyl)-3H-
[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine: HPLC RT was 6.616min. 'HNMR (CDC13): δ 5.81 (s, 2H), 5.47 (s, 2H), 3.97 (s, 3H), 3.90(s, 6H).
Example 226. Synthesis of 7-chloro-3-(2-bromo-3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazoIo[4,5-d]pyrimidin-5-yIamine Bromination of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H-[l,2,3]triazolo[4,5- d]pyrimidin-5-ykmine) with NBS (1.5 equivalents) was done following the general procedure 3 to give 7-chloro-3-(2-bromo-3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine HPLC RT was 6.541min. 'HNMR (CDC13): δ 6.52 (s, IH), 5.74(s, 2H), 5.46 (s, 2H), 3.93 (s, 3H), 3.89 (s, 3H), 3.76 (s,3H).
Example 227. 7-ChIoro-3-(2,6-dibromo-3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine (CF 2564) Bromination of 7-chloro-3-(3,4,5-trimethoxy-benzyl)-3H-[l,2,3]triazolo[4,5- d]pyrimidin-5-ykmine) with NBS (1.5 equivalents) was done following the general procedure 3 to give 7-Chloro-3-(2,6-dibromo-3,4,5-trimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine: HPLC RT was 6.923min. 'HNMR (CDC13): δ 5.91 (s, 2H), 5.51 (s, 2H), 3.99 (s, 3H), 3.93(s, 6H).
Example 228. Synthesis of 7-chloro-3-(2-iodo-3,4,5-trimethoxy-benzyι)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine The titled compound was obtained from iodination of 7-chloro-3-(3,4,5- trimethoxy-benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine) with NIS (1.5 equivalents) following the general procedure 3. HPLC RT was 6.497min. 'HNMR (CDC13): δ 6.47 (s, IH), 5.73(s, 2H), 5.44 (s, 2H), 3.92 (s, 3H), 3.88 (s, 3H), 3.73 (s,3H). Example 229. Synthesis of 7-chloro-3-(3,5-dimethoxy-benzyι)-3H- [1,2,3] triazolo [4,5-d] pyrimidin-5-ylamine Step 1: 6-chloro-N4-(3,5-dimethoxy-benzyl)-pyrimidine-2,4,5-triamine A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and l-aminomethyl-3, 5- dimethoxybenzene in n-BuOH for 15 h, following the general procedure 1. HPLC RT was 4.835 min. 'HNMR (CDCU) δ 6.46-6.47 (d, 2H), 6.38-6.37(d, IH), 5.67 (br. t, IH) 4.63 (s, 2H), 4.53-4.52 (d, 2H), 3.81 (s, 6H), 2.72 (s, 2H). Step 2: Synthesis of 7-chloro-3-(3,5-dimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamin: A solution of 6-chloro-N4-(3,5-dimethoxy-benzyl)-pyrimidine-2,4,5-tiiamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. HPLC RT was 6.185min. 'HNMR (CDCI3): δ 6.54-6.53 (d, 2H), 6.41-6.40 (d, IH), 5.58 (s, 2H), 5.54 (s, 2H), 3.78 (s, 6H).
Example 230. Synthesis of 7-chloro-3-(2-chIoro-3,5-dimethoxy-benzyl)-3H- [1 ,2,3] triazolo [4,5-d] pyrimidin-5-yIamine The titled compound was obtained by chlorination of 7-chloro-3-(3,5-dimethoxy- benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine) with NCS (1.5 equivalents) in acetic acid at 50 °C for 1 h, following the general procedure 3. HPLC RT was 6.467min. 'HNMR (CDCI3): δ 6.50-6.49 (d, IH), 6.18-6.17 (d, IH) , 5.77(s, 2H), 5.44 (s, 2H), 3.91 (s, 3H), 3.72 (s, 3H).
Example 231. Synthesis of 7-chloro-3-(2-bromo-3,5-dimethoxy-benzyl)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine The titled compound was obtained by bromination of 7-chloro-3-(3,5-dimethoxy- benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine) withNBS (1.5 equivalents) in acetic acid at 50 °C during 1 h, following the general procedure 3. HPLC RT was
6.573min. 'HNMR (d6-DMSO): δ 7.74 (s, 2H), 6.70-6.69 (d, IH), 6.23-6.22 (d, IH) , 5.63(s, 2H), 3.87 (s, 3H), 3.71 (s, 3H). Example 232. Synthesis of 7-chloro-3-(2-iodo-3,5-dimethoxy-benzyl)-3H- [1,2,3] triazolo [4,5-d] pyrimidin-5-ylamine The titled compound was obtained by iodination of 7-chloro-3-(3,5-dimethoxy- benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine) with NIS (1.5 equivalents) in acetic acid at 50 °C during 1 h, following the general procedure 3. HPLC RT was
6.739min. 'HNMR (d6-DMSO): δ 7.75 (s, 2H), 6.61-6.60 (d, IH), 6.15-6.14 (d, IH) , 5.58(s, 2H), 3.86 (s, 3H), 3.70 (s, 3H).
Example 233. Synthesis of 7-Chloro-3-(2,5-dimethoxy-benzyl)-3H- [1,2,3] triazolo [4,5-d] pyrimidin-5-ylamine Step 1: 6-chloro-N4-(2,5-dimethoxy-benzyl)-pyrimidine-2,4,5-triamine A mixture of 4,6-dichloro-pyrimidine-2,5-diamine and l-aminomethyl-2,5- dimethoxybenzene in n-BuOH for 15 h, following the general procedure 1. HPLC RT was 4.601min. 'HNMR (CDC13) δ 6.91-6.90 (d, IH), 6.82-6.80(m, 2H), 5.82 (br. t, IH) 4.62 (s, 2H), 4.59-4.58 (d, 2H), 3.85 (s, 3H), 2.78 (s, 3H), 2.75 (s, 2H).
Step 2: Synthesis of 7-chloro-3-(2,5-dimethoxy-benzyl)-3H-[l,2,3]triazolo[4,5- d] pyrimidin-5-ylamine A solution of 6-chloro-N4-(2,5-dimethoxy-benzyl)-pyrimidine-2,4,5-triamine was treated with a cold aqueous solution of NaN02, following the general procedure 2. HPLC RT was 6.130min. 'HNMR (CDC13): δ 6.84-6.83 (m, 2H), 6.64-6.63 (d, IH), 5.67 (s, 2H), 5.54 (s, 2H), 3.83 (s, 3H), 3.73 (s, 3H).
Exapmle 234. Synthesis of 7-chloro-3-(4-bromo-2,5-dimethoxy-benzyl)-3H- [1,2,3] triazolo [4,5-d] pyrimidin-5-yIamine The titled compound was obtained by bromination of 7-chloro-3-(2,5-dimethoxy- benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ykmine) with NBS (1.5 equivalents) in acetic acid at 50 °C during 1 h, following the general procedure 3. HPLC RT was 6.438min. 'HNMR (CDCI3): δ 7.11 (s, IH), 6.80 (s, IH), 5.63 (s, 2H), 5.57 (s, 2H), 3.82 (s, 3H), 3.79 (s, 3H). Example 235. Synthesis of 7-chloro-3-(3-chloro-2,5-dimethoxy-benzyι)-3H- [l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine The titled compound was obtained by chlorination of 7-chloro-3-(2,5-dimethoxy- benzyl)-3H-[l,2,3]triazolo[4,5-d]pyrimidin-5-ylamine) with NCS (1.5 equivalents) in acetic acid at 50 °C during 1 h, following the general procedure 3. HPLC RT was 6.392min. 'HNMR (CDC13): δ 6.91-6.90 (d, IH), 6.67-6.66 (d, IH), 5.70 (s, 2H), 5.43(s, 2H), 3.92 (s, 3H), 3.73 (s, 3H).
BIOLOGY EXAMPLES
The biological activites of selected triazolopyrimidines were determined using four assays: the inhibition of binding of biotinylated geldamamycin (biotin-GM) to rHSP90, the lysate binding ability, the HER2 degradation ability and the cytotoxity measurement. These assays have been described in Examples A, B, C and D in the previous sections. The biological activites are summarized in Table 8. TABLE 8. Biological Activities of Selected Triazolopyrimidines of Formula IV
Figure imgf000374_0001
Figure imgf000374_0002
Figure imgf000375_0001
Figure imgf000376_0001
ND = not determined
The foregoing examples are not limiting and are merely illustrative of various aspects and embodiments of the present invention. All documents cited herein are indicative of the levels of skill in the art to which the invention pertains and are incorporated by reference herein in their entireties. None, however, is admitted to be prior art. One skilled in the art will readily appreciate that the present invention is well adapted to carry out the objects and obtain the ends and advantages mentioned, as well as those inherent therein. The methods and compositions described illustrate preferred embodiments, are exemplary, and are not intended as limitations on the scope of the invention. Certain modifications and other uses will occur to those skilled in the art, and are encompassed within the spirit of the invention, as defined by the scope of the claims. The invention illustratively described herein suitably may be practiced in the absence of any element or elements, limitation or limitations which is not specifically disclosed herein. The terms and expressions which have been employed are used as terms of description and not of limitation, and there is no intention in the use of such terms and expressions of excluding any equivalents of the features shown and described, or portions thereof. It is recognized that various modifications are possible within the scope of the invention claimed. Thus, it should be understood that although the present invention has been specifically disclosed by preferred embodiments, optional features, modifications and variations of the concepts herein disclosed may be resorted to by those skilled in the art, and that such modifications and variations are considered to be within the scope of this invention as defined by the description and the appended claims. In addition, where features or aspects of the invention are described in terms of Markush groups or other grouping of alternatives, e.g., genuses, those skilled in the art will recognize that the invention is also thereby described in terms of any individual member or subgroup of members of the Markush group or subgenus, and exclusions of individual members as appropriate, e.g., by proviso.

Claims

1. A compound of Formula A
Figure imgf000378_0001
or tautomer or pharmaceutically acceptable salt or prodrug thereof, wherein Xi and X2 are the same or different and each is nitrogen or -CR ;
X3 is nitrogen or -CR3 wherein R3 is hydrogen, OH, a keto tautomer, -OR8, -CN, halogen, lower alkyl, or -C(0)R9;
X is nitrogen or a group CR when X3 is nitrogen, and X4 is -CR 6- RD7 . when X3 is
CR3. R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02-, or -S02N-; and R5 is alkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally bi-or tricyclic, and optionally substituted with H, halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, araalkyl, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C02R9, -N02, or -NR8R10; with the provisos that: said compound is not one found or described in one or more of JP 10025294; US Patent 4,748,177; US Patent 4,748,177; US Patent 6,369,092; WO 00/06573; WO 02/055521; WO 02/055082; WO 02/055083; European Journal of Medicinal Chemistry, 1994, 29(1), 3-9; and J. Het. Chem. 1990, 27(5), 1409; -R4R5 is not a ribose or derivative thereof, or a sugar or derivative thereof; -R4R5 is not a phosphonate or phosphonic acid, or substituted with phosphonate or phosphonic acid; and when R4 is (CH2)n where n= 0 or 1, then R4 and R5 are not connected with 'O'.
2. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug of claim 1 having Formula IIA:
Figure imgf000379_0001
wherein Xi and X2 are the same or different and each is nitrogen or -CR6; R1 is halogen, OR8, SR8, or lower alkyl;
Figure imgf000379_0002
R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02-, or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8R10, -N3, -CN, or • C(0)R9; R5 is alkyl, aromatic, heteroaromatic, alicyclic, or heterocyclic, all optionally bi- or tri-cyclic, and all optionally substituted with H, halogen, lower alkyl, -SR , -OR , - CN, - C02R9, -N02, or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
3. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 1 having Formula IV:
Figure imgf000379_0003
wherein Xi and X2 are the same or different and each is nitrogen or CR6; R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n,- where n = 0-3, -C(O), -C(S), -S02-, or -S02N-; R5 is alkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally bi-or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, - N02, or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; Ru is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
4. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 1 having Formula III
Figure imgf000380_0001
wherein Xi and X2 are the same or different and each is nitrogen or CR6; Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NR8R10; R3 is hydrogen, OH or keto tautomer, -OR8, halogen, -CN, lower alkyl or - C(0)R9; R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R5 is alkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, -C02R9, - N02 or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
5. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 1 having Formula I
Figure imgf000381_0001
wherein Xi and X2 are the same or different and each is nitrogen or -CR6; Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NR8R10; R3 is hydrogen, OH or a keto tautomer, -OR8, halogen, -CN, lower alkyl or
-C(0)R9 R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02- or -S02N- R° is hydrogen, halogen, lower alkyl, -SR", -OR8, -NR 88nRl0 , -N3, or -C(0)Ry; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, -N02, or -NR8R10; R is hydrogen, lower alkyl, lower aryl, or -(CO)R ; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R11 is lower alkyl or lower aryl; and R ° is hydrogen or lower alkyl;
6. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 1 having Formula IIA:
Figure imgf000381_0002
wherein Ri is halogen, -OR8, -SR8 or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n- where n = 0-3, -C(0), -C(S), -S02- or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8R10, -N3, -CN or C(0)R9; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, -N02, or -NR8R10; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, NR8R10 or OR11; R1 * is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
7. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 1 having Formula IIB
Figure imgf000382_0001
wherein R1 is halogen, -OR8, -SR8 or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n-, where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8R10, -N3, -CN or -C(0)R9; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, -N02, or-NR8R10; R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R1 ' is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
8. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug Thereof of claim 1 having Formula IA:
Figure imgf000383_0001
wherein Xi and X2 are the same or different and each is nitrogen or a group -CR6; R1 is halogen, -OR8, -SR8, or lower alkyl; R2 is -NR8R10; R4 is -(CH2)n- where n = 0-3, -C(O), -C(S), -S02- or -S02N-; R5 is alkyl, aromatic, heteroaromatic, alicyclic, heterocyclic, all optionally bi- or tricyclic, and all optionally substituted with H, halogen, lower alkyl, -SR8, -OR8, -CN, - C02R9, -N02, or -NR8R10; R6 is hydrogen, halogen, lower alkyl, -SR8, -OR8, -NR8R10, -N3, -CN, -C(0)R9, or together with R7 is carbonyl (C=0); RR77 iiss i inndd(ependently selected from hydrogen, lower alkyl or together with R6 is carbonyl (C=0); R8 is hydrogen, lower alkyl, lower aryl, or -(CO)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR8R10 or -OR11; R11 is lower alkyl or lower aryl; and R10 is hydrogen or lower alkyl.
9. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 2 wherein R1 is halogen, R2 is -NH2, R4 is -CH2-, R6 is H or halogen, and wherein R5 is phenyl optionally substituted with H, halogen, Cl-4 alkyl, Cl-4 alkoxy, Cl-4 alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2or - C02Rn.
10. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is halogen, R2 is -NH2, R4 is -CH2-, R6 is H, and wherein R5 is 2-halo-3,5 dimethoxyphenyl optionally substituted with H, halogen, Cl-4 alkyl, Cl-4 alkoxy, Cl-4 alkylthio, perhaloalkyl, perhaloalkyloxy, -CN, -N02, -NH2, or -C02R] * at the para (4-) position.
11. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-chloro-3, 4, 5 trimethoxyphenyl.
12. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-bromo-3, 4, 5 trimethoxyphenyl.
13. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein Ri is chloro, R2 is -NH2, R4 is -CH -, R6 is H and R5 is 2-iodo-3, 4, 5 trimethoxyphenyl.
14. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein Ri is chloro, R2 is -NH2, R4 is -CH -, R6 is H and R5 is 2-fluoro-3, 4, 5 trimethoxyphenyl.
15. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein Ri is bromo, R2 is -NH2, R4 is -CH2-, R6 is H, and R5 is 2-bromo-3, 4, 5 trimethoxyphenyl.
16. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein is bromo, R2 is -NH2, R4 is -CH2-, R6 is H, and R5 is 2-iodo-3, 4, 5 trimethoxyphenyl.
17. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein Ri is bromo, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-iodo-3, 4, 5 trimethoxyphenyl.
18. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is bromo, R2 is -NH2, R4 is -CH2-, R6 is H and R5 is 2-fluoro-3, 4, 5 trimethoxyphenyl.
19. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is chloro, R2 is -NH2, R4 is -CH2-, R6 is halo and Rs is 2-chloro-3, 4, 5 trimethoxyphenyl.
20. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is chloro, R2 is NH , R4 is -CH -, R6 is halo, and R5 is 2-bromo-3, 4, 5 trimethoxyphenyl.
21. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is bromo, R2 is -NH2, R4 is -CH2-, R6 is halo and R5 is 2-chloro-3, 4, 5 trimethoxyphenyl.
22. The compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 9 wherein R1 is bromo, R2 is -NH2, R4 is -CH2-, R6 is halo and Rs is 2-bromo-3, 4, 5 trimethoxyphenyl.
23. A pharmaceutical composition comprising the compound, tautomer, pharmaceutically acceptable salt thereof, or prodrug thereof of claim 2 and one or more pharmaceutical excipients.
24. A method of inhibiting an HSP90, comprising: contacting a cell having an HSP90 with a compound, tautomer pharmaceutically acceptable salt thereof, prodrug thereof or pharmaceutical composition according to claim 2.
25. A compound represented by Formula I, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000386_0001
I
wherein: R° is selected from hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN, and -NHR8, R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, -C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R ° taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN;
R° or R3 is -OH or -SH, the compound may exist as the corresponding (thio)keto tautomer or a mixture of keto-enol tautomers;
R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02; -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN;
R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ;
R9 is H, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl,
-NR'V0, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and
R12 is hydrogen or lower alkyl.
26. . The compound of claim 25, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein each of said aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
27. The compound of claim 25 or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R° is hydrogen, halogen, -SH, -OH, or -CN; R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
28. The compound of claim 25, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is chloro or bromo, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R3 is hydrogen, halogen, -OR8, -SR8, -NR8R10, lower alkyl, lower alkenyl, or lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl.
29. The compound of claim 25, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R° is hydrogen, halogen or -CN; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-.
30. The compound of claim 25, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R° is hydrogen, halogen, -SH, -OH or -CN; R1 is halogen; R2 is -NH2; R3 is hydrogen, halogen, -OR8, -SR8, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9 ; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
31. The compound of claim 30, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having at least three substituents.
32. The compound of claim 30, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein R1 is chloro or bromo, R2 is -NH2 and R5 is a pyridyl having at least two substituents.
33. The compound of claim 30, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituents.
34. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000389_0001
35. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000390_0001
36. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000391_0001
37. The compound of claim 30, wherein the compound is a member selected from the group of compounds below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000392_0001
38. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000393_0001
39. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000393_0002
40. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000394_0001
41. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000394_0002
42. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000395_0001
43. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000396_0001
44. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000396_0002
45. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000397_0001
46. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000398_0001
47. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000399_0001
48. The compound of claim 30, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000399_0002
49. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000400_0001
50. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000400_0002
51. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000400_0003
52. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000401_0001
53. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000401_0002
54. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000401_0003
55. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000402_0001
56. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000402_0002
57. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000402_0003
58. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000403_0001
59. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000403_0002
60. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000403_0003
61. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000404_0001
62. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000404_0002
63. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000404_0003
64. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000405_0001
65. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000405_0002
66. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000405_0003
67. The compound of claim 30, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000406_0001
68. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IB below, or a polymorph, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000406_0002
IB
wherein: R° is selected from hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN, and -NHR8, R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8 ; R is selected from the group consisting of hydrogen, halogen, -SR , -OR , -CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R and R taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R° or R3 is -OH or -SH, the compound may exist as the corresponding (thio)keto tautomer or a mixture of keto-enol tautomers;
R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-;
R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02> -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR*°R10. or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
R1 ' is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl.
69. The pharmaceutical composition of claim 68, wherein:
R° is hydrogen, halogen, -SH, -OH, or -CN, R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
70. The pharmaceutical composition of claim 68, wherein: R° is hydrogen, halogen or -CN,
R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-.
71. The pharmaceutical composition of claim 68, wherein: R° is hydrogen, halogen, -SH, -OH or -CN; R1 is halogen;
R2 is -NH2; R3 is hydrogen, halogen, OR8, SR8, NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R is hydrogen, lower alkyl, lower aryl, or -C (0)R9 ; R4 is -CH2-; and
R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
72. The pharmaceutical composition of claim 68, or a polymoφh, wherein: R1 is chloro or bromo;
R2 is -NH2; and R is a phenyl having at least three substituents, a pyridyl having at least two substituents, or 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituents.
73. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IB :
Figure imgf000409_0001
IB
or a polyirioφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R° is selected from hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN, and -NHR8, R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8 ; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8.-CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S and N; R° or R3 is -OH or -SH, the compound may exist as the corresponding (thio)keto tautomer or a mixture of keto-enol tautomers; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02j -NR R . lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl;
R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl.
74. The method of claim 73, wherein:
R° is hydrogen, halogen, -SH, -OH, or -CN, R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
75. The method of claim 73 , wherein: R1 is chloro or bromo,
R2 is -NHR8, where R8 is hydrogen or -C(0)R9,
R3 is hydrogen, halogen, OR8, SR8, NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl.
76. The method of claim 73, wherein: R° is hydrogen, halogen or -CN,
R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-.
77. The method of claim 73, wherein: R° is hydrogen, halogen, -SH, -OH or -CN;
R1 is halogen;
R2 is -NH2;
R3 is hydrogen, halogen, -OR8, -SR8, -NR8R8, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9 ;
R4 is -CH2-; and R is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
78. The method of claim 77, wherein: R1 is chloro or bromo; R2 is -NH2; and R5 is a phenyl having at least three substituent, a pyridyl having at least two substituent, or 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituents.
79. The method of claim 73, wherein the HSP90 mediated disorder is selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorder, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease.
80. The method of claim 79 wherein the fibrogenetic disorder is further selected from the group of scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
81. The method of claim 73 , further comprising administering at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents.
82. The method of claim 81 , wherein the at least one anti-neoplastic agent is selected from the group of alkykting agents, anti-metabolites, epidophyllotoxins; antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors.
83. A compound represented by Formula IC, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000413_0001
wherein: R° is hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN or -NHR8; R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein when R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10. or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of 0, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl; Rπ is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R° and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1 -3 of the ring atoms are heteroatoms selected from the group of O, S and N.
84. The compound of claim 83, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen or lower alkyl; R4 is -CHR12-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
85. The compound of claim 84, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R° is hydrogen or -NHR8; R1 is halogen, -OR1 ', -SR1 ' or lower alkyl; R ° is hydrogen or lower alkyl.
86. The compound of claim 84, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R is hydrogen; R is halogen; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R10 is hydrogen..
87. The compound of claim 86, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is chloro or bromo; R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents.
88. The compound of claim 86, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000415_0001
89. The compound of claim 86, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000416_0001
90. The compound of claim 86, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000416_0002
91. The compound of claim 86, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000417_0001
92. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IC below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000417_0002
IC wherein: R° is hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN or -NHR8; R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R4 is -CHR12-, -C(O)-, -C(S)-, -S(0)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on Rs are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein when R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ;
R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10. or -OR11, wherein
R10and R10 taken together optionally form a ring of 3-7 ring atoms and optionally
1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl,
R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl;
R12 is hydrogen or lower alkyl; and
R° and R10 when taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and ptionally
1-3 of the ring atoms are heteroatoms selected from the group of O, S and N.
93. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IC:
Figure imgf000419_0001
IC
wherein: R° is hydrogen, halogen, lower alkyl, -SR8, -OR8, -CN or -NHR8; R1 is halogen, -OR11, -SRn or lower alkyl; R2 is -NH2; R4 is -CHR12-, -C(0)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, , the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein when R and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10. or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R° and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N.
94. A compound represented by Formula ID, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000420_0001
ID
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8 , -CN, -C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN;
R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-;
R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10. or -OR11, wherein when R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R3 and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N.
95. The compound of claim 94, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R3 is hydrogen, halogen, -OR8, -SR8, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, or lower heteroaryl, wherein R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C (0)R9 ; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents, and R10 is hydrogen or lower alkyl.
96. The compound of claim 94, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R10 is hydrogen.
97. The compound of claim 94, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R3 is hydrogen; R4 is -CH2-; R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents; and R10 is hydrogen.
98. The compound of claim 97, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is chloro or bromo; and R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents.
99. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula ID below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000423_0001
ID
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R >3 is selected from the group consisting of hydrogen, halogen, -SR , -OR . -CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R ° taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and
R3 and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN.
100. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula ID:
Figure imgf000426_0001
ID
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, - C(0)R9, -C(0)OH, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic, heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic; R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-;
R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10. or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN;
R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; and R3 and R10 taken together optionally form an exocyclic double bond which is optionally substituted, or optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN.
101. A compound represented by Formula IE, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000428_0001
IE
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R 44 . is -CHR12-, -C(O)- -C(S)-, -S(O)- or -S02 R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02, -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10 3 or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R1 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl.
102. The compound of claim 101, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R4 is -CH2-; and R is aryl or heteroaryl, wherein each of said aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
103. The compound of claim 102, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R is chloro or bromo, R5 is phenyl, pyridyl or 1-oxy-pyridyl (N-oxy-pyridyl), each of which has at least two substituents.
104. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IE below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000430_0001
IE
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR1 *, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S andN; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl.
105. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IE:
Figure imgf000431_0001
IE
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NH2; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10_ lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN;
R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R12 is hydrogen or lower alkyl.
106. A compound represented by Formula IIC, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000433_0001
wherein: R1 is halogen or lower alkyl; R2 is -NR8R10; R4 is -CHR12-; R3 is hydrogen, halogen, or -CN; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate and phosphonic acid; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; provided that when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3,5 di-halo; when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons; and when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine.
107. The compound of claim 106, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen or methyl; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
108. The compound of claim 106, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R2 is -NH2; R is hydrogen; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring.
109. The compound of claim 106, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R2 is -NH2; R is lower alkyl; R3 is hydrogen; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring.
110. The compound of claim 106, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents, a pyridyl having 3 to 5 substituents or an 1-oxy- pyridyl (N-oxy-pyridyl), each of which has 3 to 5 substituents.
111. A compound represented by Formula IID, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000435_0001
IID
wherein: R1 is halogen or lower alkyl; R2 is -NR8R10; R3 is hydrogen, halogen, or -CN; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate and phosphonic acid; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11; ' R10 is independently hydrogen or lower alkyl; and R11 is lower alkyl, lower aryl or lower heteroaryl; provided that when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3,5 di-halo; when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons; when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine.
112. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein each of said aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
113. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is halogen or methyl; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
114. The compound of claim 113, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is halogen.
115. The compound of claim 114, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R2 is -NH2 and R3 is hydrogen.
116. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; R2 is -NH2; R3 is hydrogen; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring.
117. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents.
118. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a pyridyl having 3 to 5 substituents.
119. The compound of claim 111 , or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
120. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg
thereof:
Figure imgf000438_0001
121. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000439_0001
122. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000439_0002
123. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000440_0001
124. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000440_0002
125. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000440_0003
126. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof :
Figure imgf000441_0001
127. The compound of claim 116, wherein the compound is a member selected from the group of compounds below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000441_0002
128. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000442_0001
129. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000442_0002
130. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000443_0001
131. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000443_0002
132. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000443_0003
133. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000444_0001
134. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000444_0002
135. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000444_0003
136. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000445_0001
137. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000445_0002
138. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000445_0003
139. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000446_0001
140. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000446_0002
141. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000446_0003
142. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000447_0001
143. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000447_0002
144. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000447_0003
145. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000448_0001
146. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000448_0002
147. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000448_0003
148. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000449_0001
149. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000449_0002
150. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000449_0003
151. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000450_0001
152. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000450_0002
153. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000450_0003
154. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000451_0001
155. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000451_0002
156. The compound of claim 116, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000451_0003
157. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000452_0001
158. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000452_0002
159. The compound of claim 116, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000452_0003
160. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IIC below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000453_0001
IIC
wherein: R is halogen or lower alkyl; R2 is -NR8R10; R4 is -CHR12-; R3 is hydrogen, halogen, or -CN; R is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate and phosphonic acid; R is hydrogen, lower alkyl, lower aryl, or -C(0)R ; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10or -OR11; R10 is independently hydrogen or lower alkyl; R is lower alkyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; and provided that when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3,5 di-halo; when R is alicyclic, the ring system does not contain any tetra-substituted sp ring carbons; and when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine.
161. The pharmaceutical composition of claim 160 wherein R4 is -CH2-.
162. The pharmaceutical composition of claim 160, wherein: R1 is halogen; R2 is -NH2; R3 is hydrogen; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl groups is monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring.
163. The pharmaceutical composition of claim 161 wherein, wherein R1 is chloro or bromo; R2 is -NH2; and R5 is selected from a phenyl having 3 to 5 substituents, a pyridyl having 3 to 5 substituents and an 1-oxy-pyridyl (N-oxy-pyridyl), each of which has 3 to 5 substituents.
164. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IIC:
Figure imgf000455_0001
or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11, -NHR8, hydrogen, or lower alkyl; R2 is -NR8R10; R3 is hydrogen, halogen, -N3, or -CN; R4 is -(CHR12)n- where n = 0, 1 or 2, -C(O)-, -C(S)-, or -S(O)-; R5 is alkyl, aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, or - NR8R10; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; and provided that: -R4R5 is not a ribose or derivative thereof, or a sugar or derivative thereof; -R4R5 is not a phosphonate or phosphonic acid, or substituted with phosphonate or phosphonic acid; and when R4 is -(CH2)n- where n=l or 2, then R4 and R5 are not connected through an ether linkage.
165. The method of claim 164, wherein: R is hydrogen, halogen or -CN; and R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally substituted with halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR8, -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate, or phosphonic acid.
166. The method of claim 164, wherein: R1 is halogen; R2 is -NH2; R is hydrogen; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein: the aryl and heteroaryl groups are monocyclic or bicyclic, the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with two substituents, the two substituents must form part of an optionally substituted fused ring.
167. The method of claim 165, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having 3 to 5 substituents, a pyridyl having 3 to 5 substituents or an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
168. The method of claim 165, wherein the HSP90 mediated disorder is selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorders, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease.
169. The method of claim 168 wherein the fibrogenetic disorder is further selected from the group of scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
170. The method of claim 165, further comprising administering at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents.
171. The method of claim 170, wherein the at least one anti-neoplastic agent is selected from the group of alkykting agents, anti-metabolites, epidophyllotoxins; antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors.
172. A compound, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is represented by any of the following formulae, respectively:
Figure imgf000457_0001
and Z is L*-R4-R5; wherein: T1 is halogen, NR8R10, triflate, tosylate, or mesykte; R4 is -CHR12-, R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with only two substituents, the two substituents must form part of an optionally substituted fused ring, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the subsituents are selected from the group of halogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower alicyclic, arylalkyl, aryloxy, aryloxyalkyl, alkoxyalkyl, perhaloalkyl, perhaloalkyloxy, perhaloacyl, -N3, -SR , -OR8, -CN, -C(0)R9, -N02, -NR8R10, phosphonate and phosphonic acid; R8 is hydrogen, lower alkyl, lower aryl, or -C(0)R9; R9 is lower alkyl, lower aryl, lower heteroaryl, -NR'0R10 or -OR11; R10 is independently hydrogen or lower alkyl; R11 is lower alkyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; R21 is halogen, lower alkyl or -OH; R22 is -NR8R10; R23 is hydrogen, halogen, or -CN; R24 is -NH2, -N02 or -NO; R25 is halogen or -OH; R26 is -C(0)NH2 or C(0)OEt; and R27 is -NH2, -OH or halogen; provided that: when R5 is aryl, R5 is not an organo-metallic cyclopentadiene; when R5 is phenyl, the substituents are not 3, 5 di-halo; when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons; or when R5 is heterocyclic, the ring system does not contain any tetra-substituted sp3 ring carbons or the ring system is not a tetra-substituted pyrrolidine.
173. The compound of claim 172 wherein R4 is -CH2-.
174. The compound of claim 173, wherein: L1 is -Cl, -Br or NH2; and R5 is aryl or heteroaryl, wherein the aryl group is substituted with 4 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, wherein when the heteroaryl is substituted with two substituents, the two substituents must form part of an optionally substituted fused ring..
175. The compound of claim 174, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein Y is a substituted purine.
176. The compound of claim 173, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
177. The compound of claim 175, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent that comprises DMF.
178. A compound represented by Formula IIIA, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000459_0001
R5 IIIA
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, - C(0)R9, -C02H, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-2 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)R9, -C(0)OH, -N02, -NR8R10, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N;
R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-;
R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R and R taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; and R12 is hydrogen or lower alkyl.
179. The compound of claim 178 or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
180. The compound of claim 178, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R2 is -NH2; R3 is selected from hydrogen, halogen, -SR8, -OR8, -CN, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, wherein R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl, and wherein R and R taken together optionally form a ring of 3-7 πng atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
181. The compound of claim 178, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen or lower alkyl; R2 is -NH2; R4 is -(CH2)-; and R5 is aryl, heteroaryl, alicyclic or heterocyclic, wherein each of said aryl, heteroaryl alicyclic or heterocyclic groups is monocyclic or bicyclic.
182. The compound of claim 178, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is halogen; R2 is -NH2; R3 is hydrogen, halogen, -SR8, -OR8, lower alkyl, lower aryl, lower heteroaryl, or -NR8R10 wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
183. The compound of claim 182, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R5 is a phenyl having 3 to 5 substituents.
184. The compound of claim 182, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R is chloro or bromo, R5 is a pyridyl having 3 to 5 substituents.
185. The compound of claim 182, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
186. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000463_0001
187. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000464_0001
188. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000465_0001
189. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000466_0001
190. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000467_0001
191. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000468_0001
192. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000468_0002
193. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000469_0001
194. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000469_0002
195. The compound of claim 182, wherein said compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000470_0001
196. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
197. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof: .
Figure imgf000470_0003
198. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000471_0001
199. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000471_0002
200. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000471_0003
201. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000472_0001
202. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000472_0002
203. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000472_0003
204. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000473_0001
205. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000473_0002
206. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000473_0003
207. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000474_0001
208. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000474_0002
209. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000474_0003
210. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000475_0001
211. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000475_0002
212. The compound of ckiml82, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000475_0003
213. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000476_0001
214. The compound of claim 182, wherein said compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000476_0002
215. A pharmaceutical composition comprisin one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IIIA below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000476_0003
IIIA
wherein: R' is halogen, -OR", -SRU or lower alkyl; R2 is -NHR8;
R »3 is selected from the group consisting of hydrogen, halogen, -SR , -OR , -CN, C(0)R9, -C02H, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic, R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-2 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)R9, -C(0)OH, -N02, -NR8R*°. lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02, -NR8R10. lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; and R12 is hydrogen or lower alkyl.
216. The pharmaceutical composition of claim 215, wherein: R is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
217. The pharmaceutical composition of claim 215, wherein: R1 is halogen; R2 is -NH2; R3 is hydrogen, halogen, -SR8, -OR8, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, or -NR8R10 wherein R8 and R1Q taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S andN; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
218. The pharmaceutical composition of claim 217, wherein R1 is chloro or bromo, R5 is a phenyl having 3 to 5 substituents.
219. The pharmaceutical composition of claim 217, wherein R1 is chloro or bromo, R5 is a pyridyl having 3 to 5 substituents.
220. The pharmaceutical composition of claim 217, wherein R1 is chloro or bromo, R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
221. A method of treating an individual having an HSP90 mediated disorder comprising dministering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IIA:
Figure imgf000479_0001
IIA
or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R3 is selected from the group consisting of hydrogen, halogen, -SR8, -OR8, -CN, - C(0)R9, -C02H, -N02, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, aryl, heteroaryl, alicyclic and heterocyclic, all optionally substituted, wherein: the aryl, heteroaryl, alicyclic and heterocyclic groups are optionally mono-, bi- or tri-cyclic; when R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-2 of the ring atoms are heteroatoms selected from the group of O, S and N, and the optional substituents on R3 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)R9, -C(0)OH, -N02, -NR8R10, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; and R12 is hydrogen or lower alkyl.
222. The method of claim 221, wherein: R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
223. The method of claim 221 , wherein: R2 is -NH2; R3 is selected from hydrogen, halogen, -SR8, -OR8, -CN, -NR8R10, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, lower alicyclic, lower heterocyclic, wherein R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl, and wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
224. The method of claim 221 , wherein: R1 is halogen or lower alkyl; R2 is -NH2; R4 is -(CH2)-; and R5 is aryl, heteroaryl, alicyclic or heterocyclic, wherein each of said aryl, heteroaryl alicyclic or heterocyclic groups is monocyclic or bicyclic.
225. The method of claim 221, wherein: R1 is halogen; R2 is -NH2; R3 is hydrogen, halogen, -SR8, -OR8, lower alkyl, lower alkenyl, lower alkynyl, lower perhaloalkyl, lower aryl, lower heteroaryl, or -NR8R10 wherein R8 and R10 when taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group ofO, S and N; R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of said aryl and heteroaryl groups is monocyclic or bicyclic.
226. The method of claim 225, wherein R1 is chloro or bromo, R5 is a phenyl having 3 to 5 substituents.
227. The method of claim 225, wherein R1 is chloro or bromo, R5 is a pyridyl having 3 to 5 substituents.
228. The method of claim 225, wherein R1 is chloro or bromo, R5 is an 1-oxy- pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
229. The method of claim 221 , wherein the HSP90-mediated disorder is selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorders, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease.
230. The method of claim 229 wherein the fibrogenetic disorder is further selected from the group of scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
231. The method of claim 221 further comprising administering at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents.
232. The method of claim 231 wherein the at least one anti-neoplastic agent is selected from the group of alkykting agents, anti-metabolites, epidophyllotoxins; antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors.
233. A compound represented by Formula IIB, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000483_0001
IIB wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR1 ', R10 and R10 taken together optionally form a ring of 3- 7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; and R15 is hydrogen, lower alkyl, lower alkenyl or lower alknyl.
234. The compound of claim 233, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof: R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tricyclic; and R9 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl.
235. The compound of claim 233, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof: R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R4 is -CH2-; and R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tri- cyclic.
236. The compound of claim 235, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, R5 is a phenyl having 3 to 5 substituents.
237. The compound of claim 235, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, R5 is a pyridyl having 3 to 5 substituents.
238. The compound of claim 235, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having 3 to 5 substituents.
239. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipients and at least one compound represented by Formula IIB below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000486_0001
IIB
wherein R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3- 7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R is hydrogen or lower alkyl; and R15 is hydrogen, lower alkyl, lower alkenyl or lower alknyl.
63. A pharmaceutical composition of claim 62, wherein: R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R4 is -(CH2)-; and R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tricyclic.
240. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IIB:
Figure imgf000487_0001
IIB or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8; R4 is -CHR12-, -C(O), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR , -CN, - C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3- 7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R11 is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; and R15 is hydrogen, lower alkyl, lower alkenyl or lower alknyl.
65. The method of claim 64, wherein: R1 is halogen or lower alkyl; R2 is -NHR8, where R8 is hydrogen or -C(0)R9; R4 is -(CH2)-; and R5 is aryl, heteroaryl, alicyclic, or heterocyclic, all optionally mono-, bi- or tricyclic.
241. A compound, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, prepared by the process comprising: reacting a compound of Formula Y and a compound of Formula Z, wherein: Y is represented by the following formulae:
Figure imgf000489_0001
Z is L*-R4-R5; wherein: T1 is halogen, NR8R10 , triflate, tosylate, or mesykte; R4 is -(CHR12)-, -C(0), -C(S), -S(O)-, or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents on R5 are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, - OR8, -CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazole, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas and thioamides, wherein R and R taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R8 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl or -C(0)R9; R9 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 or -OR11, R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R1 ' is lower alkyl, lower alkenyl, lower alkynyl, lower aryl or lower heteroaryl; R12 is hydrogen or lower alkyl; R21 is halogen, -OR8, -SR8 or lower alkyl; R22 is -NR8R10; R23 is hydrogen, -OH or its keto tautomer, -QR8, halogen, -CN, lower alkyl, lower aryl or -C(0)R9; R24 is -CHO, -NH2, -N02 or -NO; R25 is halogen or -OH; R is -C(0)NH2 or C(0)OEt; and R27 is -NH2, -OH or halogen.
242. The compound of claim 241, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein R5 is aryl, heteroaryl, alicyclic, or heterocyclic, optionally mono- or bicyclic.
243. The compound of claim 242, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein L is -Cl, -Br or -NH2; R4 is -CH2-; R5 is aryl or heteroaryl.
244. The compound of claim 242, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein Y is a pyrazolopyrimidine.
245. The compound of claim 242, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
246. The compound of claim 242, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent that comprises DMF.
247. A compound represented by Formula IVA, or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof,
Figure imgf000491_0001
IVA
wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8 ; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, - C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazol, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1- 3 of the ring atoms are heteroatoms selected from the group of 0, S andN; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; and R12 is hydrogen or lower alkyl; provided that when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons.
248. The compound of claim 247, or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof, wherein each of said aryl, heteroaryl, alicyclic or heterocyclic group is monocyclic or bicyclic.
249. The compound of claim 247, or a polymoφh, solvate, ester, tautomer, enantiomer, diastereomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is halogen; and R2 is -NHR8, where R8 is hydrogen or -C(0)R9.
250. The compound of claim 247, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is chloro or bromo, R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CHR12-,
251. The compound of claim 247, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R2 is -NHR8, where R8 is hydrogen or -C(0)R9; and R4 is -CH2-.
252. The compound of claim 247, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein: R1 is chloro or bromo; R2 is -NH2, R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
253. The compound of claim 252, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having at least three substituent.
254. The compound of claim 252, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2 and R5 is a pyridyl having at least two substituent.
255. The compound of claim 252, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituent.
256. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000494_0001
257. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000495_0001
258. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000496_0001
259. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000496_0002
260. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000497_0001
261. The compound of claim 252, wherein the compound is a member selected from the group below, or a polymoφh, solvate, ester, tautomer, enantiomers, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000497_0002
262. The compound of claim 252, wherein the compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodrug thereof:
Figure imgf000498_0001
263. The compound of claim 252, wherein the compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000498_0002
264. The compound of claim 252, wherein the compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000498_0003
265. The compound of claim 252, wherein the compound is represented by the formula below, or a polymoφh, solvate, ester, tautomer, pharmaceutically acceptable salt or prodmg thereof:
Figure imgf000499_0001
266. A pharmaceutical composition comprising one or more pharmaceutical acceptable excipient and at least one compound represented by Formula IVA below, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof,
Figure imgf000499_0002
Formula IVA
wherein: R1 is halogen, -ORπ, -SR'' or lower < ilkyl; R2 is -NHR8; R4 is -CHR12-; , -C(O)-, -C(S)-; , -S(O)- • or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, - C(0)R , -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylaxnino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazol, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1- 3 of the ring atoms are heteroatoms selected from the group of O, S andN; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10, or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R is lower alkyl, lower alkenyl, lower alkynyl, lower heteroaryl or lower aryl; and Rt is -CHR12-, -C(O)-, -C(S)-, -S(0)- or -S02-; and R is hydrogen or lower alkyl; provided that when R is alicyclic, the ring system does not contain any tetra-substituted sp πng carbons.
267. The pharmaceutical composition of claim 266, wherein: R1 is halogen; R2 is -NH2, R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
268. A method of treating an individual having an HSP90 mediated disorder comprising administering to said individual a pharmaceutical composition comprising a pharmaceutically effective amount of a compound of Formula IVA:
Figure imgf000501_0001
Formula IVA
or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodrug thereof, wherein: R1 is halogen, -OR11, -SR11 or lower alkyl; R2 is -NHR8 ; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, -CN, -C(0)OH, - C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, rieteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazol, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1- 3 of the ring atoms are heteroatoms selected from the group of O, S andN; R8 is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 , or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl, R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; and R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; and R12 is hydrogen or lower alkyl; provided that when R5 is alicyclic, the ring system does not contain any tetra-substituted sp3 ring carbons.
269. The method of claim 268, wherein: R1 is halogen; R2 is -NH2, R4 is -CH2-; and R5 is aryl or heteroaryl, wherein each of the aryl and heteroaryl is monocyclic or bicyclic and is substituted with 3 to 5 substituents.
270. The method of claim 268, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is a phenyl having at least three substituent.
271. The method of claim 268, wherein R1 is chloro or bromo, R2 is -NH2 and R5 is a pyridyl having at least two substituent.
272. The method of claim 268, wherein R1 is chloro or bromo, R2 is -NH2, and R5 is an 1-oxy-pyridyl (N-oxy-pyridyl) having at least two substituent.
273. The method of claim 268, wherein the HSP90 mediated disorder is selected from the group of inflammatory diseases, infections, autoimmune disorders, stroke, ischemia, cardiac disorder, neurological disorders, fibrogenetic disorders, proliferative disorders, tumors, leukemias, neoplasms, cancers, carcinomas, metabolic diseases, and malignant disease.
274. The method of claim 273 wherein the fibrogenetic disorder is further selected from the group of scleroderma, polymyositis, systemic lupus, rheumatoid arthritis, liver cirrhosis, keloid formation, interstitial nephritis and pulmonary fibrosis.
275. The method of claim 268, further comprising administering at least one therapeutic agent selected from the group of cytotoxic agents, anti-angiogenesis agents and anti-neoplastic agents.
276. The method of claim 275, wherein the at least one anti-neoplastic agent is selected from the group of alkykting agents, anti-metabolites, epidophyllotoxins; antineoplastic enzymes, topoisomerase inhibitors, procarbazines, mitoxantrones, platinum coordination complexes, biological response modifiers and growth inhibitors, hormonal/anti-hormonal therapeutic agents, and haematopoietic growth factors.
277. A compound, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, prepared by the process comprising: reacting a compound of formula Y and a compound of formula Z, wherein: Y is a represented by any one of the following formulae:
Figure imgf000503_0001
Z is L'-R4-R5; wherein: T1 is halogen, NR8R10, triflate, tosylate, or mesykte; R4 is -CHR12-, -C(O)-, -C(S)-, -S(O)- or -S02-; R5 is aryl, heteroaryl, alicyclic, or heterocyclic, wherein: the aryl group is substituted with 3 to 5 substituents, the heteroaryl group is substituted with 2 to 5 substituents, the alicyclic group is substituted with 3 to 5 substituents, the heterocyclic group is substituted with 3 to 5 substituents, and the substituents are selected from the group consisting of halogen, lower alkyl, lower alkenyl, lower alkynyl, -SR8, -OR8, - CN, -C(0)OH, -C(0)R9, -N02 and -NR8R10, lower aryl, heteroaryl, alicyclic, lower heterocyclic, arylalkyl, heteroarylalkyl, amino, alkylamino, dialkylamino, diarylalkylamino, oxo, oxa, perhaloalkyl, perhaloalkoxy, perhaloacyl, guanidine, pyridinyl, thiophene, furanyl, indole, indazol, phosphonates, phosphates, phosphoramides, sulfonates, sulfones, sulfates, sulphonamides, carbamates, ureas, thioureas, thioamides, wherein R8 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R is hydrogen, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, or -C(0)R9 ; R9 is H, lower alkyl, lower alkenyl, or lower alkynyl, lower aryl, lower heteroaryl, -NR10R10 , or -OR11, wherein R10 and R10 taken together optionally form a ring of 3-7 ring atoms and optionally 1-3 of the ring atoms are heteroatoms selected from the group of O, S and N; R10 is hydrogen, lower alkyl, lower heteroaryl, lower aryl, lower alkenyl, or lower alkynyl,
R11 is lower alkyl, lower alkenyl, or lower alkynyl, lower heteroaryl or lower aryl; R12 is hydrogen or lower alkyl; R21 is halogen, -OR8, -SR8 or lower alkyl; R22 is -NR8R10;
R24 is -NH2, -N02 or -NO; R25 is halogen or -OH; R26 is -C(0)NH2 or C(0)OEt; and R is -NH2, -OH or halogen; provided that when R5 is alicyclic, the ring system does not contain any tetra- substituted sp ring carbons.
278. The compound of claim 276, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein L1 is -Cl, -Br or -NH2; R5 is aryl or heteroaryl.
279. The compound of claim 278, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, R4 is -CH2-.
280. The compound of claim 278, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent comprising a member selected from the group of DMF, THF and DMSO.
281. The compound of claim 278, or a polymoφh, solvate, ester, tautomer, enantiomer, pharmaceutically acceptable salt or prodmg thereof, wherein said reaction is performed in a solvent that comprises DMF.
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Cited By (92)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7129244B2 (en) 2003-09-18 2006-10-31 Conforma Therapeutics Corporation Triazolopyrimidines and related analogs as HSP90-inhibitors
WO2008035629A1 (en) 2006-09-19 2008-03-27 Daiichi Sankyo Company, Limited Pyrazolopyrimidine derivative
FR2907453A1 (en) * 2006-10-24 2008-04-25 Sanofi Aventis Sa New fluorene compounds are heat shock protein inhibitors useful in chemotherapy and to prevent/treat neurodegenerative diseases comprising Huntington disease, Parkinson's disease, Alzheimer's disease and multiple sclerosis
WO2008093075A2 (en) * 2007-02-01 2008-08-07 Astrazeneca Ab 5,6,7,8-tetrahydropteridine derivatives as hsp90 inhibitors
JP2008536867A (en) * 2005-04-14 2008-09-11 ノバルティス ヴァクシンズ アンド ダイアグノスティクス, インコーポレイテッド 2-Amino-quinazolin-5-one as an HSP90 inhibitor useful in treating proliferative diseases
JP2008537751A (en) * 2005-04-13 2008-09-25 アステックス、セラピューティックス、リミテッド Pharmaceutical compounds
EP2012791A2 (en) * 2006-02-07 2009-01-14 Conforma Therapeutics Corporation 7,9-dihydro-purin-8-one and related analogs as hsp90-inhibitors
US7544672B2 (en) 2005-03-30 2009-06-09 Conforma Therapeutics Corporation Alkynyl pyrrolo[2,3-d]pyrimidines and related analogs as HSP90-inhibitors
WO2009114470A2 (en) * 2008-03-10 2009-09-17 Curis, Inc. Tetrahydroindole and tetrahdyroindazole as hsp90 inhibitors containing a zinc binding moiety
US7595401B2 (en) 2006-05-12 2009-09-29 Myriad Pharmaceuticals, Inc. Therapeutic compounds and their use in cancer
JP2010500870A (en) * 2006-08-03 2010-01-14 セルゾーム アーゲー Methods for identification of PI3K interacting molecules and methods for purification of PI3K
US7763624B2 (en) 2005-08-22 2010-07-27 Amgen Inc. Substituted pyrazolo[3,4-d]pyrimidines as ACK-1 and LCK inhibitors
WO2010098344A1 (en) 2009-02-25 2010-09-02 第一三共株式会社 Tricyclic pyrazolopyrimidine derivative
US7960420B2 (en) 2007-12-21 2011-06-14 Joyant Pharmaceuticals, Inc Diazonamide analogs with improved solubility
WO2011076725A1 (en) 2009-12-21 2011-06-30 Bayer Cropscience Ag Thienylpyri (mi) dinylazole and their use for controlling phytopathogenic fungi
US7989482B2 (en) 2008-04-29 2011-08-02 Joyant Pharmaceuticals, Inc. Indoline anti-cancer agents
WO2012026433A1 (en) 2010-08-23 2012-03-01 第一三共株式会社 Free crystal of tricyclic pyrazolopyrimidine derivative
WO2012026434A1 (en) 2010-08-23 2012-03-01 第一三共株式会社 Crystal of tricyclic pyrazolopyrimidine derivative
US8153619B2 (en) 2008-05-22 2012-04-10 Joyant Pharmaceuticals, Inc. Diazonamide analogs
WO2012083181A1 (en) * 2010-12-16 2012-06-21 Indiana University Research And Technology Corporation Alpha helix mimetics and methods for using
WO2012145255A2 (en) 2011-04-22 2012-10-26 Joyant Pharmaceuticals, Inc. Diazonamide analogs
WO2012160464A1 (en) 2011-05-26 2012-11-29 Daiichi Sankyo Company, Limited Heterocyclic compounds as protein kinase inhibitors
US8324240B2 (en) 2007-03-20 2012-12-04 Curis, Inc. Fused amino pyridine as HSP90 inhibitors
US8362023B2 (en) 2011-01-19 2013-01-29 Hoffmann-La Roche Inc. Pyrazolo pyrimidines
EP2571361A1 (en) * 2010-05-19 2013-03-27 The University of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
US8642554B2 (en) 2007-04-12 2014-02-04 Joyant Pharmaceuticals, Inc. Smac mimetic dimers and trimers useful as anti-cancer agents
WO2014055624A1 (en) 2012-10-02 2014-04-10 The General Hospital Corporation D/B/A Massachusetts General Hospital Methods relating to dna-sensing pathway related conditions
US8722703B2 (en) 2009-01-16 2014-05-13 Curis, Inc. Fused amino pyridines for the treatment of brain tumors
US20140243359A1 (en) * 2011-07-20 2014-08-28 Medestea Research & Production S.P.A. Adenine derivatives having immunomodulating anti-inflammatory and analgesic activity
WO2014145576A2 (en) * 2013-03-15 2014-09-18 Northwestern University Substituted pyrrolo(2,3-d)pyrimidines for the treatment of cancer
EP2784076A1 (en) 2009-10-28 2014-10-01 Joyant Pharmaceuticals, Inc. Dimeric SMAC mimetics
TWI460177B (en) * 2009-07-10 2014-11-11 Taiho Pharmaceutical Co Ltd An azabicyclo compound or a salt
US8957078B2 (en) 2013-03-15 2015-02-17 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US8969360B2 (en) 2013-03-15 2015-03-03 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
WO2015140386A1 (en) * 2014-03-21 2015-09-24 Universidad De Granada Purine derivatives as dapk1 inhibitors
WO2015157128A1 (en) * 2014-04-11 2015-10-15 The University Of North Carolina At Chapel Hill Therapuetic uses of selected pyrrolopyrimidine compounds with anti-mer tyrosine kinase activity
US9163021B2 (en) 2012-10-04 2015-10-20 Pfizer Limited Pyrrolo[3,2-c]pyridine tropomyosin-related kinase inhibitors
US9273056B2 (en) 2011-10-03 2016-03-01 The University Of North Carolina At Chapel Hill Pyrrolopyrimidine compounds for the treatment of cancer
US9309250B2 (en) 2011-06-22 2016-04-12 Vertex Pharmaceuticals Incorporated Substituted pyrrolo[2,3-b]pyrazines as ATR kinase inhibitors
US9340546B2 (en) 2012-12-07 2016-05-17 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
KR20160059366A (en) * 2014-11-18 2016-05-26 한국과학기술연구원 Novel pyrrolo pyrimidine derivatives and composition for preventing or treating cancer comprising the same
US9394315B2 (en) 2012-05-08 2016-07-19 Lycera Corporation Tetrahydro[1,8]naphthyridine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US9512111B2 (en) 2010-11-08 2016-12-06 Lycera Corporation N-sulfonylated tetrahydroquinolines and related bicyclic compounds for inhibition of RORγ activity and the treatment of disease
US9562047B2 (en) 2012-10-17 2017-02-07 The University Of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
US9567326B2 (en) 2012-05-22 2017-02-14 The University Of North Carolina At Chapel Hill Pyrimidine compounds for the treatment of cancer
US9611267B2 (en) 2012-06-13 2017-04-04 Incyte Holdings Corporation Substituted tricyclic compounds as FGFR inhibitors
US9657033B2 (en) 2012-05-08 2017-05-23 Lycera Corporation Tetrahydronaphthyridine and related bicyclic compounds for inhibition of RORγ activity and the treatment of disease
US9663519B2 (en) 2013-03-15 2017-05-30 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9663502B2 (en) 2013-12-20 2017-05-30 Lycera Corporation 2-Acylamidomethyl and sulfonylamidomethyl benzoxazine carbamates for inhibition of RORgamma activity and the treatment of disease
US9670215B2 (en) 2014-06-05 2017-06-06 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9708318B2 (en) 2015-02-20 2017-07-18 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US9745311B2 (en) 2012-08-10 2017-08-29 Incyte Corporation Substituted pyrrolo[2,3-b]pyrazines as FGFR inhibitors
US9771330B2 (en) 2012-11-27 2017-09-26 The University Of North Carolina At Chapel Hill Pyrimidine compounds for the treatment of cancer
US9783511B2 (en) 2013-12-20 2017-10-10 Lycera Corporation Carbamate benzoxazine propionic acids and acid derivatives for modulation of RORgamma activity and the treatment of disease
US9801889B2 (en) 2015-02-20 2017-10-31 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US9809561B2 (en) 2013-12-20 2017-11-07 Merck Sharp & Dohme Corp. Tetrahydronaphthyridine, benzoxazine, aza-benzoxazine and related bicyclic compounds for inhibition of RORgamma activity and the treatment of disease
US9890156B2 (en) 2015-02-20 2018-02-13 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US9896441B2 (en) 2014-05-05 2018-02-20 Lycera Corporation Tetrahydroquinoline sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
KR20180040037A (en) * 2016-10-11 2018-04-19 한국과학기술연구원 2-Amino-purine derivative compound, preparing method and use thereof
WO2018079988A1 (en) * 2016-10-26 2018-05-03 울산과학기술원 Compound useful as trap1 inhibitor, and anticancer composition containing same
US10040790B2 (en) 2013-04-19 2018-08-07 Incyte Holdings Corporation Bicyclic heterocycles as FGFR inhibitors
US10160760B2 (en) 2013-12-06 2018-12-25 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10189777B2 (en) 2014-05-05 2019-01-29 Lycera Corporation Benzenesulfonamido and related compounds for use as agonists of RORγ and the treatment of disease
US10213427B2 (en) 2010-12-22 2019-02-26 Incyte Corporation Substituted imidazopyridazines and benzimidazoles as inhibitors of FGFR3
US10221142B2 (en) 2015-02-11 2019-03-05 Merck Sharp & Dohme Corp. Substituted pyrazole compounds as RORgammaT inhibitors and uses thereof
US10287272B2 (en) 2015-10-27 2019-05-14 Merck Sharp & Dohme Corp. Substituted indazole compounds as RORgammaT inhibitors and uses thereof
WO2019122059A1 (en) * 2017-12-21 2019-06-27 Galderma Research & Development Novel mtor inhibitor compounds
US10344000B2 (en) 2015-10-27 2019-07-09 Merck Sharp & Dohme Corp. Substituted bicyclic pyrazole compounds as RORgammaT inhibitors and uses thereof
US10421751B2 (en) 2015-05-05 2019-09-24 Lycera Corporation Dihydro-2H-benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10532088B2 (en) 2014-02-27 2020-01-14 Lycera Corporation Adoptive cellular therapy using an agonist of retinoic acid receptor-related orphan receptor gamma and related therapeutic methods
US10584121B2 (en) 2015-10-27 2020-03-10 Merck Sharp & Dohme Corp. Heteroaryl substituted benzoic acids as RORgammaT inhibitors and uses thereof
US10611762B2 (en) 2017-05-26 2020-04-07 Incyte Corporation Crystalline forms of a FGFR inhibitor and processes for preparing the same
US10611740B2 (en) 2015-06-11 2020-04-07 Lycera Corporation Aryl dihydro-2H-benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10709708B2 (en) 2016-03-17 2020-07-14 The University Of North Carolina At Chapel Hill Method of treating cancer with a combination of MER tyrosine kinase inhibitor and an epidermal growth factor receptor (EGFR) inhibitor
US10851105B2 (en) 2014-10-22 2020-12-01 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US11174257B2 (en) 2018-05-04 2021-11-16 Incyte Corporation Salts of an FGFR inhibitor
US11179394B2 (en) 2014-06-17 2021-11-23 Vertex Pharmaceuticals Incorporated Method for treating cancer using a combination of Chk1 and ATR inhibitors
KR20220007447A (en) * 2020-07-10 2022-01-18 이화여자대학교 산학협력단 Compounds as a TRAP1 selective inhibitor, and composition for preventing or treating cancer comprising the same
US11261192B2 (en) 2018-03-09 2022-03-01 Recurium Ip Holdings, Llc Substituted 1,2-dihydro-3H-pyrazolo[3,4-D]pyrimidin-3-ones
US11274108B2 (en) 2015-07-20 2022-03-15 Genzyme Corporation Colony stimulating factor-1 receptor (CSF-1R) inhibitors
US11407750B2 (en) 2019-12-04 2022-08-09 Incyte Corporation Derivatives of an FGFR inhibitor
US11464774B2 (en) 2015-09-30 2022-10-11 Vertex Pharmaceuticals Incorporated Method for treating cancer using a combination of DNA damaging agents and ATR inhibitors
US11466004B2 (en) 2018-05-04 2022-10-11 Incyte Corporation Solid forms of an FGFR inhibitor and processes for preparing the same
US11518767B2 (en) 2017-12-21 2022-12-06 Galderma Research & Development MTOR inhibitor compounds
US11530216B2 (en) 2020-12-23 2022-12-20 Genzyme Corporation Deuterated colony stimulating factor-1 receptor (CSF-1R) inhibitors
US11607416B2 (en) 2019-10-14 2023-03-21 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US11628162B2 (en) 2019-03-08 2023-04-18 Incyte Corporation Methods of treating cancer with an FGFR inhibitor
US11897891B2 (en) 2019-12-04 2024-02-13 Incyte Corporation Tricyclic heterocycles as FGFR inhibitors
US11939331B2 (en) 2021-06-09 2024-03-26 Incyte Corporation Tricyclic heterocycles as FGFR inhibitors
US12012409B2 (en) 2020-01-15 2024-06-18 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US12065494B2 (en) 2021-04-12 2024-08-20 Incyte Corporation Combination therapy comprising an FGFR inhibitor and a Nectin-4 targeting agent
US12122767B2 (en) 2019-10-01 2024-10-22 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors

Families Citing this family (96)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6992188B1 (en) * 1995-12-08 2006-01-31 Pfizer, Inc. Substituted heterocyclic derivatives
KR100850727B1 (en) * 2000-11-02 2008-08-06 슬로안-케테링인스티튜트퍼캔서리서치 Small molecule compositions for binding to hsp90
AU2002315389A1 (en) * 2001-06-21 2003-01-08 Ariad Pharmaceuticals, Inc. Novel pyrazolo-and pyrrolo-pyrimidines and uses thereof
US20070129334A1 (en) * 2001-10-30 2007-06-07 Conforma Therapeutics Corporation Orally Active Purine-Based Inhibitors of Heat Shock Protein 90
AU2002343604C1 (en) 2001-10-30 2009-09-17 Conforma Therapeutics Corporation Purine analogs having HSP90-inhibiting activity
US8741578B2 (en) * 2004-11-02 2014-06-03 The Regents Of The University Of California Methods of detecting chronic lymphocytic leukemia with Hsp90 and ZAP-70
AU2005302000A1 (en) * 2004-11-02 2006-05-11 Conforma Therapeutics Corporation Methods and compositions for treating chronic lymphocytic leukemia
US8212012B2 (en) * 2004-11-03 2012-07-03 University Of Kansas Novobiocin analogues having modified sugar moieties
US9120774B2 (en) 2004-11-03 2015-09-01 University Of Kansas Novobiocin analogues having modified sugar moieties
WO2006124897A2 (en) * 2005-05-13 2006-11-23 Lexicon Genetics Incorporated Methods and compositions for improving cognition
WO2007013964A1 (en) * 2005-07-22 2007-02-01 Sunesis Pharmaceuticals, Inc. Pyrazolo pyrimidines useful as aurora kinase inhibitors
CN101304748A (en) 2005-08-22 2008-11-12 加利福尼亚大学董事会 TLR agonist
US20070049608A1 (en) * 2005-08-24 2007-03-01 Fink Cynthia A Pyrrolopyridine, pyrrolopyrimidine and pyrazolopyridine compounds, compositions comprising them, and methods of their use
WO2007035963A2 (en) * 2005-09-23 2007-03-29 Conforma Therapeutics Corporation Anti-tumor methods using multi drug resistance independent synthetic hsp90 inhibitors
JP2009515884A (en) * 2005-11-10 2009-04-16 スミスクライン・ビーチャム・コーポレイション Inhibitor of AKT activity
JP2009517342A (en) * 2005-11-10 2009-04-30 スミスクライン・ビーチャム・コーポレイション Inhibitor of AKT activity
EP1962863A4 (en) * 2005-12-22 2010-11-24 Conforma Therapeutics Corp Orally active purine-based inhibitors of heat shock protein 90
WO2007097839A2 (en) * 2006-02-16 2007-08-30 Massachusetts Eye And Ear Infirmary Ansamycin analogs or heat shock 90 inhibitors in combination with pdt treatin conditions of the eye
WO2007142755A2 (en) * 2006-05-31 2007-12-13 The Regents Of The University Of California Purine analogs
US10336757B2 (en) 2006-06-30 2019-07-02 Sloan-Kettering Institute For Cancer Research Treatment of neurodegenerative diseases through inhibition of HSP90
US20080009508A1 (en) * 2006-07-10 2008-01-10 Lucie Szucova 6,9-Disubstituted Purine Derivatives And Their Use For Treating Skin
WO2008045529A1 (en) * 2006-10-12 2008-04-17 Serenex, Inc. Purine and pyrimidine derivatives for treatment of cancer and inflammatory diseases
CL2007002994A1 (en) * 2006-10-19 2008-02-08 Wyeth Corp HETEROCICLIC DERIVATIVE COMPOUNDS CONTAINING SULFAMOIL, INHIBITORS OF HSP90; PHARMACEUTICAL COMPOSITION; AND USE FOR THE TREATMENT OF CANCER, SUCH AS CANCER OF BREAST, COLON AND PROSTATE, BETWEEN OTHERS.
GB0622084D0 (en) * 2006-11-06 2006-12-13 Chroma Therapeutics Ltd Inhibitors of HSP90
WO2008094602A2 (en) * 2007-01-30 2008-08-07 Biogen Idec Ma Inc. 1-h-pyrazolo (3,4b) pyrimidine derivatives and their use as modulators of mitotic kinases
SI2510946T1 (en) 2007-02-07 2015-12-31 The Regents Of The University Of California Conjugates of synthetic tlr agonists and uses therefor
US8143265B2 (en) * 2007-04-16 2012-03-27 Meharry Medical College Method of treating atherosclerosis
US7960353B2 (en) * 2007-05-10 2011-06-14 University Of Kansas Novobiocin analogues as neuroprotective agents and in the treatment of autoimmune disorders
DE102007028521A1 (en) * 2007-06-21 2008-12-24 Merck Patent Gmbh Indazolamidderivate
US8119616B2 (en) * 2007-09-10 2012-02-21 Curis, Inc. Formulation of quinazoline based EGFR inhibitors containing a zinc binding moiety
KR20100074177A (en) 2007-09-10 2010-07-01 유니버시티 오브 매사추세츠 Mitochondria-targeted anti-tumour agents
WO2009046448A1 (en) 2007-10-04 2009-04-09 Intellikine, Inc. Chemical entities and therapeutic uses thereof
US8895701B2 (en) * 2008-01-05 2014-11-25 Sloan-Kettering Institute For Cancer Research Peptide-conjugated oligonucleotide therapeutic and method of making and using same
EP2259788A4 (en) * 2008-02-07 2011-03-16 Univ California TREATMENT OF BLADDER DISEASES WITH A TLR7 ACTIVATOR
US8190543B2 (en) * 2008-03-08 2012-05-29 Tokyo Electron Limited Autonomous biologically based learning tool
WO2009114874A2 (en) 2008-03-14 2009-09-17 Intellikine, Inc. Benzothiazole kinase inhibitors and methods of use
EP2252293B1 (en) 2008-03-14 2018-06-27 Intellikine, LLC Kinase inhibitors and methods of use
LT5623B (en) 2008-04-30 2010-01-25 Biotechnologijos Institutas, , 5-aryl-4-(5-substituted 2,4-dihydroxyfenil)-1,2,3-thiadiazoles as inhibitors of hsp90 chaperone and the intermediates for production thereof
WO2009139834A1 (en) * 2008-05-13 2009-11-19 Poniard Pharmaceuticals, Inc. Bioactive compounds for treatment of cancer and neurodegenerative diseases
AU2009268611B2 (en) 2008-07-08 2015-04-09 Intellikine, Llc Kinase inhibitors and methods of use
US20100022635A1 (en) * 2008-07-28 2010-01-28 University Of Kansas Heat shock protein 90 inhibitor dosing methods
GB0819102D0 (en) * 2008-10-17 2008-11-26 Chroma Therapeutics Ltd Pyrrolo-pyrimidine compounds
US8476282B2 (en) 2008-11-03 2013-07-02 Intellikine Llc Benzoxazole kinase inhibitors and methods of use
CA2743864A1 (en) * 2008-11-25 2010-06-10 Merck Sharp & Dohme Corp. Soluble guanylate cyclase activators
WO2010088924A1 (en) 2009-02-06 2010-08-12 Telormedix Sa Pharmaceutical compositions comprising imidazoquinolin(amines) and derivatives thereof suitable for local administration
BRPI1008383A2 (en) * 2009-02-11 2016-02-23 Univ California compound, pharmaceutical composition, method for preventing, inhibiting or treating a condition, and use of a compound
DK2770327T3 (en) * 2009-03-30 2017-08-28 Nordic Bioscience As BIOMARKERING ASSAY FOR FIBROSE
WO2010117425A1 (en) * 2009-03-31 2010-10-14 Biogen Idec Ma Inc. Certain substituted pyrimidines, pharmaceutical compositions thereof, and methods for their use
MX2011013816A (en) 2009-06-29 2012-04-11 Incyte Corp Pyrimidinones as pi3k inhibitors.
SG10201404886PA (en) 2009-08-17 2014-10-30 Intellikine Llc Heterocyclic compounds and uses thereof
US20110082098A1 (en) * 2009-09-30 2011-04-07 University Of Kansas Novobiocin analogues and treatment of polycystic kidney disease
CN105924443A (en) 2009-10-07 2016-09-07 斯隆-凯特林癌症研究院 Purine derivatives useing as Hsp90 inhibitors
US20110130711A1 (en) * 2009-11-19 2011-06-02 Follica, Inc. Hair growth treatment
TW201130842A (en) * 2009-12-18 2011-09-16 Incyte Corp Substituted fused aryl and heteroaryl derivatives as PI3K inhibitors
WO2011075643A1 (en) * 2009-12-18 2011-06-23 Incyte Corporation Substituted heteroaryl fused derivatives as pi3k inhibitors
WO2011130342A1 (en) 2010-04-14 2011-10-20 Incyte Corporation FUSED DERIVATIVES AS ΡI3Κδ INHIBITORS
EP2563404B1 (en) 2010-04-30 2016-09-21 Urogen Pharma Ltd. Phospholipid drug analogs
US9050319B2 (en) 2010-04-30 2015-06-09 Telormedix, Sa Phospholipid drug analogs
US9062055B2 (en) 2010-06-21 2015-06-23 Incyte Corporation Fused pyrrole derivatives as PI3K inhibitors
AU2011343712B2 (en) 2010-12-16 2015-09-17 Genentech, Inc. Tricyclic PI3k inhibitor compounds and methods of use
AR084366A1 (en) 2010-12-20 2013-05-08 Incyte Corp N- (1- (REPLACED PHENYL) ETIL) -9H-PURIN-6-AMINAS AS PI3K INHIBITORS
CA2825028A1 (en) * 2011-02-09 2012-08-16 F. Hoffman-La Roche Ag Heterocyclic compounds as pi3 kinase inhibitors
WO2012148540A1 (en) 2011-02-23 2012-11-01 Intellikine, Llc Combination of kanase inhibitors and uses threof
WO2012125629A1 (en) 2011-03-14 2012-09-20 Incyte Corporation Substituted diamino-pyrimidine and diamino-pyridine derivatives as pi3k inhibitors
WO2012135009A1 (en) 2011-03-25 2012-10-04 Incyte Corporation Pyrimidine-4,6-diamine derivatives as pi3k inhibitors
EA024647B1 (en) 2011-04-05 2016-10-31 Слоун-Кеттеринг Инститьют Фо Кэнсэ Рисерч Hsp90 INHIBITORS
BR112013025634A2 (en) 2011-04-05 2016-07-19 Sloan Kettering Inst Cancer hsp90 inhibitors
MY179332A (en) 2011-09-02 2020-11-04 Incyte Holdings Corp Heterocyclylamines as pl3k inhibitors
AR090548A1 (en) 2012-04-02 2014-11-19 Incyte Corp BICYCLIC AZAHETEROCICLOBENCILAMINS AS PI3K INHIBITORS
WO2013172872A1 (en) * 2012-05-15 2013-11-21 Calasia Pharmaceuticals, Inc. Pyrimidine diamine derivatives as inhibitors of cytosolic hsp90
CN103724269B (en) * 2012-10-11 2016-12-21 中国科学院上海药物研究所 Phenyl 1,2-isoxazole or phenyl 1,2-pyrazole compound and application thereof
US9266892B2 (en) 2012-12-19 2016-02-23 Incyte Holdings Corporation Fused pyrazoles as FGFR inhibitors
WO2014144715A1 (en) 2013-03-15 2014-09-18 Memorial Sloan-Kettering Cancer Center Hsp90-targeted cardiac imaging and therapy
CN105209042B (en) 2013-03-22 2019-03-08 米伦纽姆医药公司 The combination of 1/2 inhibitor of catalytic MTORC and selective aurora A kinase inhibitor
WO2015013579A1 (en) 2013-07-26 2015-01-29 Update Pharma Inc. Compositions to improve the therapeutic benefit of bisantrene
JP6539275B2 (en) 2013-08-16 2019-07-03 メモリアル スローン ケタリング キャンサー センター Selective GRP94 inhibitors and uses thereof
US10077277B2 (en) 2014-06-11 2018-09-18 Incyte Corporation Bicyclic heteroarylaminoalkyl phenyl derivatives as PI3K inhibitors
MX2017003513A (en) 2014-09-17 2017-07-28 Memorial Sloan Kettering Cancer Center Hsp90-targeted inflammation and infection imaging and therapy.
MD3262046T2 (en) 2015-02-27 2021-03-31 Incyte Corp Salts of pi3k inhibitor and processes for their preparation
WO2016183060A1 (en) 2015-05-11 2016-11-17 Incyte Corporation Process for the synthesis of a phosphoinositide 3-kinase inhibitor
WO2016183063A1 (en) 2015-05-11 2016-11-17 Incyte Corporation Crystalline forms of a pi3k inhibitor
US11697851B2 (en) 2016-05-24 2023-07-11 The Regents Of The University Of California Early ovarian cancer detection diagnostic test based on mRNA isoforms
EP3448859B1 (en) 2017-03-20 2019-07-10 Forma Therapeutics, Inc. Pyrrolopyrrole compositions as pyruvate kinase (pkr) activators
US10472361B2 (en) * 2017-08-16 2019-11-12 Bristol-Myers Squibb Company Toll-like receptor 7 (TLR7) agonists having a benzotriazole moiety, conjugates thereof, and methods and uses therefor
KR20190043437A (en) 2017-10-18 2019-04-26 씨제이헬스케어 주식회사 Heterocylic compound as a protein kinase inhibitor
CN107857763A (en) * 2017-11-28 2018-03-30 江苏杏睿生物科技有限公司 A kind of adjacent nitro aroylation derivatives quasi-compound, preparation method and applications
CN112469418A (en) 2018-06-01 2021-03-09 因赛特公司 Dosing regimens for treating PI3K related disorders
JP7450610B2 (en) 2018-09-19 2024-03-15 ノヴォ・ノルディスク・ヘルス・ケア・アーゲー Activation of pyruvate kinase R
EP3853206B1 (en) 2018-09-19 2024-04-10 Novo Nordisk Health Care AG Treating sickle cell disease with a pyruvate kinase r activating compound
KR102195348B1 (en) 2018-11-15 2020-12-24 에이치케이이노엔 주식회사 Novel compound as a protein kinase inhibitor, and the pharmaceutical composition comprising thereof
US11591329B2 (en) 2019-07-09 2023-02-28 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
CN114615977B (en) 2019-09-19 2025-01-14 诺沃挪第克健康护理股份公司 Pyruvate kinase R (PKR) activation composition
US11566028B2 (en) 2019-10-16 2023-01-31 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US12128035B2 (en) 2021-03-19 2024-10-29 Novo Nordisk Health Care Ag Activating pyruvate kinase R
CN115925724B (en) * 2022-11-16 2024-09-06 成都中医药大学 Adenine compound with anti-inflammatory effect and preparation method and application thereof
CN116332940B (en) * 2023-02-14 2024-09-13 广西民族大学 7-Deazapurine derivative and preparation method and application thereof

Family Cites Families (127)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB884151A (en) 1957-12-06 1961-12-06 Ciba Ltd New pyrazolo-pyrimidines substituted in the pyrazole nucleus, and process for their manufacture
IL64501A (en) 1980-12-22 1985-07-31 Astra Laekemedel Ab 9-substituted 4-hydroxybutyl guanine derivatives,their preparation and antiviral use
US4699877A (en) * 1982-11-04 1987-10-13 The Regents Of The University Of California Methods and compositions for detecting human tumors
US4921859A (en) * 1983-10-31 1990-05-01 Warner-Lambert Company Purine derivatives
US4806642A (en) * 1984-10-05 1989-02-21 Warner-Lambert Company Purine derivatives
US5098906A (en) 1983-10-31 1992-03-24 Warner-Lambert Company Purine derivatives
US4547573A (en) 1983-12-02 1985-10-15 Ici Pharma Process for preparing cephalosporin derivatives
DE3578499D1 (en) * 1984-02-02 1990-08-09 Merck & Co Inc 5- (AMINO OR SUBSTITUTED AMINO) -1,2,3-TRIAZOLE.
US4748177A (en) * 1984-03-26 1988-05-31 Warner-Lambert Company Guanine derivatives
US4617304A (en) * 1984-04-10 1986-10-14 Merck & Co., Inc. Purine derivatives
IT1196261B (en) 1984-09-20 1988-11-16 Pierrel Spa 8-SUBSTITUTED NUCLEOSIDIC AND PURINIC DERIVATIVES
US4772606A (en) * 1985-08-22 1988-09-20 Warner-Lambert Company Purine derivatives
ZA857647B (en) * 1984-10-12 1986-05-28 Warner Lambert Co Purine derivatives
IL76546A (en) 1984-10-12 1988-12-30 Warner Lambert Co 9-(heteroarylalkyl)-6-purine(thi)one derivatives,their preparation and pharmaceutical compositions containing them
JO1406B1 (en) 1984-11-02 1986-11-30 سميث كلاين اند فرينش لابوراتوريز ليمتد Chemical compounds
EP0216860B1 (en) 1985-03-15 1992-10-28 SUMMERTON, James Stereoregular polynucleotide-binding polymers
US5217866A (en) * 1985-03-15 1993-06-08 Anti-Gene Development Group Polynucleotide assay reagent and method
IL78643A0 (en) 1985-05-02 1986-08-31 Wellcome Found Purine derivatives,their preparation and pharmaceutical compositions containing them
GB8515934D0 (en) 1985-06-24 1985-07-24 Janssen Pharmaceutica Nv (4-piperidinomethyl and-hetero)purines
US4918162A (en) 1986-05-06 1990-04-17 The Regents Of The University Of California Assays and antibodies for N-MYC proteins
DE3623099C3 (en) * 1986-07-09 1998-08-13 Spoetzl Markus Dipl Ing Fh Blow molding machine
US5002950A (en) * 1986-10-24 1991-03-26 Warner-Lambert Co. 7-deazaguanines as immunomodulators
US4968603A (en) 1986-12-31 1990-11-06 The Regents Of The University Of California Determination of status in neoplastic disease
US5204353A (en) * 1987-04-07 1993-04-20 Ciba-Geigy Corporation 3-benzyl-3H-1,2,3-triazolo[4,5-d]pyrimidines, compositions thereof, and method of treating epilepsy therewith
JPH0821101B2 (en) 1987-07-21 1996-03-04 三洋電機株式会社 Coin sorter
SE8801729D0 (en) 1988-05-06 1988-05-06 Astra Ab PURINE DERIVATIVES FOR USE IN THERAPY
US4923885A (en) 1988-08-19 1990-05-08 Merck & Co., Inc. 5-amino-1-(4-naphthoylbenzyl)-1,2,3-triazole-4-carboxamides and analogs as antiproliferative agents
EP0363320A3 (en) 1988-10-06 1991-11-21 Ciba-Geigy Ag Substituted 9h purine
US5332744A (en) 1989-05-30 1994-07-26 Merck & Co., Inc. Substituted imidazo-fused 6-membered heterocycles as angiotensin II antagonists
ES2085446T3 (en) 1990-07-04 1996-06-01 Merrell Pharma Inc DERIVATIVES OF 9-PURINYL PHOSPHONIC ACID.
GB9020931D0 (en) 1990-09-26 1990-11-07 Wellcome Found Heterocyclic compounds
ATE187173T1 (en) 1991-03-05 1999-12-15 Ajinomoto Kk CYCLOPROPANE DERIVATIVE
US5939420A (en) 1991-04-08 1999-08-17 Duquesne University Of The Holy Ghost Pyrrolo 2,3d!derivatives
WO1992021032A1 (en) * 1991-05-24 1992-11-26 The Regents Of The University Of California Methods for the detection of bcr-abl and abnormal abl proteins in leukemia patients
US6025126A (en) * 1991-10-28 2000-02-15 Arch Development Corporation Methods and compositions for the detection of chromosomal aberrations
CA2093403C (en) 1992-04-08 1999-08-10 Fumio Suzuki Therapeutic agent for parkinson's disease
JPH0680670A (en) 1992-09-03 1994-03-22 Ajinomoto Co Inc Cyclopropane derivative and its production
US6005107A (en) * 1992-12-23 1999-12-21 Biochem Pharma, Inc. Antiviral compounds
US6444656B1 (en) 1992-12-23 2002-09-03 Biochem Pharma, Inc. Antiviral phosphonate nucleotides
GB9226879D0 (en) 1992-12-23 1993-02-17 Iaf Biochem Int Anti-viral compounds
US5744492A (en) 1993-09-17 1998-04-28 United States Of America Method for inhibiting angiogenesis
US5602156A (en) 1993-09-17 1997-02-11 The United States Of America As Represented By The Department Of Health And Human Services Method for inhibiting metalloproteinase expression
GB9402161D0 (en) * 1994-02-04 1994-03-30 Wellcome Found Chloropyrimidine intermediates
JP3769737B2 (en) 1994-03-30 2006-04-26 味の素株式会社 Cyclopropane derivative and process for producing the same
US5932566A (en) * 1994-06-16 1999-08-03 Pfizer Inc. Ansamycin derivatives as antioncogene and anticancer agents
US6110923A (en) 1994-06-22 2000-08-29 Biochem Pharma Inc. Method for treating cancer using novel substituted purinyl derivatives with immunomodulating activity
US5525606A (en) 1994-08-01 1996-06-11 The United States Of America As Represented By The Department Of Health And Human Services Substituted 06-benzylguanines and 6(4)-benzyloxypyrimidines
JPH0841035A (en) 1994-08-05 1996-02-13 Ajinomoto Co Inc Cyclopropane derivative and its production
US5846749A (en) * 1994-10-12 1998-12-08 The Regents Of The University Of California Quantitative measurement of tissue protein identified by immunohistochemistry and standardized protein determination
JPH08208687A (en) 1994-11-25 1996-08-13 Sankyo Co Ltd Glyceryl oligonucleotide
US5656629A (en) * 1995-03-10 1997-08-12 Sanofi Winthrop, Inc. 6-substituted pyrazolo (3,4-d)pyrimidin-4-ones and compositions and methods of use thereof
US6177460B1 (en) * 1995-04-12 2001-01-23 The Procter & Gamble Company Method of treatment for cancer or viral infections
JPH0920776A (en) 1995-06-30 1997-01-21 Nippon Paper Ind Co Ltd New purine nucleoside derivative, its production and antiviral agent with the same as active ingredient
JPH09169758A (en) 1995-10-18 1997-06-30 Nippon Paper Ind Co Ltd New purine nucleoside derivative, its production and antivirus using the same
JPH1025294A (en) 1996-03-26 1998-01-27 Akira Matsuda Fused heterocyclic derivative, method for producing the same, and therapeutic agent for malignant tumor containing the same
AU698419B2 (en) 1996-07-03 1998-10-29 Dainippon Sumitomo Pharma Co., Ltd. A novel purine derivative
US6723727B1 (en) 1996-12-20 2004-04-20 Hoechst Aktiengesellschaft Substituted purine derivatives, processes for their preparation, their use, and compositions comprising them
US6284748B1 (en) 1997-03-07 2001-09-04 Metabasis Therapeutics, Inc. Purine inhibitors of fructose 1,6-bisphosphatase
US5861503A (en) 1997-04-30 1999-01-19 The Regents Of The University Of California Process for producing 8-fluoropurines
US6670348B1 (en) 1997-05-14 2003-12-30 Sloan-Kettering Institute For Cancer Research Methods and compositions for destruction of selected proteins
AU746706B2 (en) 1997-07-03 2002-05-02 Du Pont Pharmaceuticals Company Imidazopyrimidines and imidazopyridines for the treatment of neurological disorders
DE69832715T2 (en) 1997-07-12 2007-01-11 Cancer Research Technology Ltd. CYCLINE-DEPENDENT KINASE INHIBITING PURE DERIVATIVES
GB9717849D0 (en) 1997-08-23 1997-10-29 Seal Sands Chemicals Limited Preparation of pyridene derivatives
AUPO912997A0 (en) 1997-09-11 1997-10-02 Commonwealth Scientific And Industrial Research Organisation Antiviral agents
US5968921A (en) 1997-10-24 1999-10-19 Orgegon Health Sciences University Compositions and methods for promoting nerve regeneration
CA2309350C (en) 1997-11-12 2007-04-03 Mitsubishi Chemical Corporation Purine derivatives and medicaments comprising the same as active ingredient
TW572758B (en) 1997-12-22 2004-01-21 Sumitomo Pharma Type 2 helper T cell-selective immune response inhibitors comprising purine derivatives
AU3378599A (en) 1998-04-03 1999-10-25 University Of Pittsburgh Benzoquinoid ansamycins for the treatment of cardiac arrest and stroke
US5985060A (en) 1998-07-25 1999-11-16 Breed Automotive Technology, Inc. Gas generant compositions containing guanidines
SI20022A (en) 1998-07-29 2000-02-29 Kemijski inštitut Alkyl substituted purine derivatives and their preparation
JP2000072773A (en) 1998-08-28 2000-03-07 Zeria Pharmaceut Co Ltd Purine derivatives
US6369092B1 (en) * 1998-11-23 2002-04-09 Cell Pathways, Inc. Method for treating neoplasia by exposure to substituted benzimidazole derivatives
EP1149111B1 (en) * 1999-01-06 2009-08-12 University Of Southern California Method and composition for angiogenesis inhibition
CZ27399A3 (en) 1999-01-26 2000-08-16 Ústav Experimentální Botaniky Av Čr Substituted nitrogen heterocyclic derivatives process of their preparation, the derivatives employed as medicaments, pharmaceutical composition and a compound pharmaceutical preparation in which these derivatives are comprised as well as use of these derivatives for preparing medicaments
EP1150982B1 (en) 1999-02-01 2005-10-12 Cv Therapeutics, Inc. PURINE INHIBITORS OF CYCLIN DEPENDENT KINASE 2 AND IkB-alpha
FR2790702B1 (en) 1999-03-08 2001-07-20 Sidel Sa MOLDING UNIT AND EXTRUSION-BLOWING MACHINE PROVIDED WITH SUCH A UNIT
US6174875B1 (en) 1999-04-01 2001-01-16 University Of Pittsburgh Benzoquinoid ansamycins for the treatment of cardiac arrest and stroke
AU4589800A (en) 1999-05-05 2000-11-21 Darwin Discovery Limited 9-(1,2,3,4-tetrahydronaphthalen-1-yl)-1,9-dihydropurin-6-one derivatives as pde7inhibitors
US6660845B1 (en) * 1999-11-23 2003-12-09 Epoch Biosciences, Inc. Non-aggregating, non-quenching oligomers comprising nucleotide analogues; methods of synthesis and use thereof
CA2395520A1 (en) 1999-12-21 2001-06-28 Sugen, Inc. 4-substituted 7-aza-indolin-2-ones and their use as protein kinase inhibitors
AU3540101A (en) 2000-01-07 2001-07-16 Universitaire Instelling Antwerpen Purine derivatives, process for their preparation and use thereof
WO2001072779A1 (en) 2000-03-24 2001-10-04 Duke University Characterization of grp94-ligand interactions and purification, screening, and therapeutic methods relating thereto
US6667300B2 (en) * 2000-04-25 2003-12-23 Icos Corporation Inhibitors of human phosphatidylinositol 3-kinase delta
PT3029041T (en) 2000-04-25 2020-05-13 Icos Corp Inhibitors of human phosphatidyl-inositol 3-kinase delta
WO2002002123A1 (en) 2000-06-29 2002-01-10 Trustees Of Boston University Use of geldanamycin and related compounds for prophylaxis or treatment of fibrogenic disorders
EP1322307B1 (en) 2000-07-28 2011-09-28 Sloan-Kettering Institute For Cancer Research Methods for treating cell proliferative disorders and viral infections
US6613089B1 (en) 2000-10-25 2003-09-02 Sdgi Holdings, Inc. Laterally expanding intervertebral fusion device
JP2004512381A (en) 2000-11-02 2004-04-22 スローン−ケッタリング・インスティテュート・フォー・キャンサー・リサーチ Methods for enhancing the efficacy of cytotoxic agents by using HSP90 inhibitors
KR100850727B1 (en) 2000-11-02 2008-08-06 슬로안-케테링인스티튜트퍼캔서리서치 Small molecule compositions for binding to hsp90
GB0100623D0 (en) 2001-01-10 2001-02-21 Vernalis Res Ltd Chemical compounds IV
GB0100624D0 (en) 2001-01-10 2001-02-21 Vernalis Res Ltd Chemical compounds VII
GB0100621D0 (en) 2001-01-10 2001-02-21 Vernalis Res Ltd Chemical compounds VI
MY141789A (en) * 2001-01-19 2010-06-30 Lg Chem Investment Ltd Novel acyclic nucleoside phosphonate derivatives, salts thereof and process for the preparation of the same.
EP1423080A4 (en) 2001-03-01 2009-06-03 Conforma Therapeutics Corp Methods for treating genetically-defined proliferative disorders with hsp90 inhibitors
US6881567B2 (en) * 2001-03-16 2005-04-19 Her Majesty The Queen In Right Of Canada As Represented By The Minister Of Agricultural And Agri-Food Canada Pre-emergent biological control agents
EP1386923B1 (en) 2001-04-17 2008-08-13 Dainippon Sumitomo Pharma Co., Ltd. Novel adenine derivatives
US20020156277A1 (en) 2001-04-20 2002-10-24 Fick David B. Synthesis and methods of use of purine analogues and derivatives
US20030022864A1 (en) 2001-04-24 2003-01-30 Ishaq Khalid S. 9-[(5-dihydroxyboryl)-pentyl] purines, useful as an inhibitor of inflammatory cytokines
WO2002088079A2 (en) 2001-05-01 2002-11-07 Bristol-Myers Squibb Company Dual inhibitors of pde 7 and pde 4
JP2004529188A (en) 2001-05-23 2004-09-24 スローン − ケッタリング インスティチュート フォー キャンサー リサーチ Treatment of cancer associated with elevation
PE20030008A1 (en) 2001-06-19 2003-01-22 Bristol Myers Squibb Co DUAL INHIBITORS OF PDE 7 AND PDE 4
JP2005503358A (en) 2001-06-22 2005-02-03 フアーマセツト・リミテツド β-2'- or 3'-halonucleoside
ATE301123T1 (en) 2001-06-27 2005-08-15 Cyclacel Ltd 2,6,9-SUBSTITUTED PURINE DERIVATIVES AND THEIR USE IN THE TREATMENT OF PROLIFERATIVE DISEASES
US6962991B2 (en) 2001-09-12 2005-11-08 Epoch Biosciences, Inc. Process for the synthesis of pyrazolopyrimidines
WO2003026571A2 (en) 2001-09-24 2003-04-03 Conforma Therapeutics Corporation Process for preparing 17-allyl amino geldanamycin (17-aag) and other ansamycins
PL205971B1 (en) 2001-09-24 2010-06-30 Imp Innovations Ltd Modification of feeding behavior
JP2003113181A (en) 2001-10-04 2003-04-18 Sumika Fine Chemicals Co Ltd Method for producing 6-halopurine
DE10152275A1 (en) 2001-10-23 2003-04-30 Bayer Ag Process for the electrolysis of aqueous solutions of hydrogen chloride
AU2002343604C1 (en) 2001-10-30 2009-09-17 Conforma Therapeutics Corporation Purine analogs having HSP90-inhibiting activity
US7553979B2 (en) * 2001-11-09 2009-06-30 Conforma Therapeutics Corporation HSP90-inhibiting zearalanol compounds and methods of producing and using same
AU2002364566B2 (en) 2001-12-12 2009-03-26 Conforma Therapeutics Corporation Assays and implements for determining and modulating HSP90 binding activity
CA2474508A1 (en) 2002-02-08 2003-08-14 Conforma Therapeutics Corporation Ansamycins having improved pharmacological and biological properties
JP2004018453A (en) 2002-06-14 2004-01-22 Sumika Fine Chemicals Co Ltd Alkynylpurine compound and its manufacturing method
WO2004014913A2 (en) 2002-08-08 2004-02-19 Memory Pharmaceuticals Corporation Derivatives of 2-trifluormethyl-6-aminopurine as phosphodiesterase 4 inhibitors
GB0219746D0 (en) * 2002-08-23 2002-10-02 Inst Of Ex Botany Ascr Azapurine derivatives
AU2003267145A1 (en) * 2002-09-13 2004-04-30 Irm, Llc Highly specific modulators of gtpases for target validation
RU2005108601A (en) 2002-09-26 2006-01-20 Эл Джи Лайф Сайенсиз Лтд. (Kr) (+) - TRANS-ISOMERS (1-PHOSPHONOMETOXY-2-ALKYL CYCLOPROPYL) METHYL NUCLEOSIDE DERIVATIVES, METHOD FOR PRODUCING THEIR STEREOISOMERS AND APPLICATION OF THESE COMPOUNDS AS A RELATED TO
US7601694B2 (en) * 2003-02-20 2009-10-13 New York University CLK-peptide and SLK-peptide
CA2531232A1 (en) * 2003-07-16 2005-02-10 Janssen Pharmaceutica N.V. Triazolopyrimidine derivatives as glycogen synthase kinase 3 inhibitors
CN100404536C (en) * 2003-07-16 2008-07-23 詹森药业有限公司 Triazolopyrimidine derivatives as glycogen synthase kinase 3 inhibitors
WO2005012324A2 (en) 2003-07-30 2005-02-10 Gilead Sciences, Inc. Nucleobase phosphonate analogs for antiviral treatment
WO2005016348A1 (en) 2003-08-14 2005-02-24 Icos Corporation Method of inhibiting immune responses stimulated by an endogenous factor
WO2005016349A1 (en) 2003-08-14 2005-02-24 Icos Corporation Methods of inhibiting leukocyte accumulation
CN101906106A (en) 2003-09-18 2010-12-08 康福玛医药公司 New heterogeneous ring compound as the HSP90-inhibitor
US20080081817A1 (en) * 2004-07-23 2008-04-03 Tanabe Seiyaku Co., Ltd. Nitrogenous Fused Bicyclic Compound
WO2007035963A2 (en) * 2005-09-23 2007-03-29 Conforma Therapeutics Corporation Anti-tumor methods using multi drug resistance independent synthetic hsp90 inhibitors
WO2016146042A1 (en) 2015-03-13 2016-09-22 Acro Biotech Co., Ltd. Zinc binding fusion protein of glutathione s-transferase and metallothionein

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
See references of EP1670802A4 *

Cited By (177)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7138402B2 (en) 2003-09-18 2006-11-21 Conforma Therapeutics Corporation Pyrrolopyrimidines and related analogs as HSP90-inhibitors
US7138401B2 (en) 2003-09-18 2006-11-21 Conforma Therapeutics Corporation 2-aminopurine analogs having HSP90-inhibiting activity
US7148228B2 (en) 2003-09-18 2006-12-12 Conforma Therapeutics Corporation Pyrazolopyrimidines and related analogs as HSP90-inhibitors
US7129244B2 (en) 2003-09-18 2006-10-31 Conforma Therapeutics Corporation Triazolopyrimidines and related analogs as HSP90-inhibitors
US8093229B2 (en) 2005-03-30 2012-01-10 Conforma Therapeutics Corporation Alkynyl pyrrolo[2,3-d]pyrimidines and related analogs as HSP90-inhibitors
US7544672B2 (en) 2005-03-30 2009-06-09 Conforma Therapeutics Corporation Alkynyl pyrrolo[2,3-d]pyrimidines and related analogs as HSP90-inhibitors
JP2008537751A (en) * 2005-04-13 2008-09-25 アステックス、セラピューティックス、リミテッド Pharmaceutical compounds
JP2008536867A (en) * 2005-04-14 2008-09-11 ノバルティス ヴァクシンズ アンド ダイアグノスティクス, インコーポレイテッド 2-Amino-quinazolin-5-one as an HSP90 inhibitor useful in treating proliferative diseases
US7763624B2 (en) 2005-08-22 2010-07-27 Amgen Inc. Substituted pyrazolo[3,4-d]pyrimidines as ACK-1 and LCK inhibitors
EP2012791A4 (en) * 2006-02-07 2010-09-22 Conforma Therapeutics Corp 7,9-dihydro-purin-8-one and related analogs as hsp90-inhibitors
EP2012791A2 (en) * 2006-02-07 2009-01-14 Conforma Therapeutics Corporation 7,9-dihydro-purin-8-one and related analogs as hsp90-inhibitors
JP2009536960A (en) * 2006-05-12 2009-10-22 ミリアド ジェネティクス, インコーポレイテッド Therapeutic compounds and their use in cancer
US8476285B2 (en) 2006-05-12 2013-07-02 Myrexis, Inc. Purine-core inhibitors of HSP90 and their use in treating cancer
US7595401B2 (en) 2006-05-12 2009-09-29 Myriad Pharmaceuticals, Inc. Therapeutic compounds and their use in cancer
JP2010500870A (en) * 2006-08-03 2010-01-14 セルゾーム アーゲー Methods for identification of PI3K interacting molecules and methods for purification of PI3K
KR101485199B1 (en) 2006-09-19 2015-01-22 다이이찌 산쿄 가부시키가이샤 Pyrazolopyrimidine derivative
US8158638B2 (en) 2006-09-19 2012-04-17 Daiichi Sankyo Company, Limited Pyrazolopyrimidine derivative
WO2008035629A1 (en) 2006-09-19 2008-03-27 Daiichi Sankyo Company, Limited Pyrazolopyrimidine derivative
JP5252636B2 (en) * 2006-09-19 2013-07-31 第一三共株式会社 Pyrazolopyrimidine derivatives
WO2008049994A1 (en) 2006-10-24 2008-05-02 Sanofi-Aventis New fluorene derivatives, compositions containing the same and use thereof as inhibitors of the protein chaperone hsp 90
JP2010507634A (en) * 2006-10-24 2010-03-11 サノフイ−アベンテイス Novel fluorene derivatives, compositions containing them, and their use as inhibitors of the protein chaperone HSP90
US8163750B2 (en) 2006-10-24 2012-04-24 Sanofi-Aventis Fluorene derivatives, compositions containing the same and use thereof as inhibitors of the protein chaperone HSP 90
FR2907453A1 (en) * 2006-10-24 2008-04-25 Sanofi Aventis Sa New fluorene compounds are heat shock protein inhibitors useful in chemotherapy and to prevent/treat neurodegenerative diseases comprising Huntington disease, Parkinson's disease, Alzheimer's disease and multiple sclerosis
US7799781B2 (en) 2007-02-01 2010-09-21 Astrazeneca Ab 5,6,7,8-tetrahydropteridine derivatives as HSP90 inhibitors
WO2008093075A2 (en) * 2007-02-01 2008-08-07 Astrazeneca Ab 5,6,7,8-tetrahydropteridine derivatives as hsp90 inhibitors
WO2008093075A3 (en) * 2007-02-01 2008-10-02 Astrazeneca Ab 5,6,7,8-tetrahydropteridine derivatives as hsp90 inhibitors
US8324240B2 (en) 2007-03-20 2012-12-04 Curis, Inc. Fused amino pyridine as HSP90 inhibitors
US8642554B2 (en) 2007-04-12 2014-02-04 Joyant Pharmaceuticals, Inc. Smac mimetic dimers and trimers useful as anti-cancer agents
US7960420B2 (en) 2007-12-21 2011-06-14 Joyant Pharmaceuticals, Inc Diazonamide analogs with improved solubility
WO2009114470A3 (en) * 2008-03-10 2010-01-14 Curis, Inc. Tetrahydroindole and tetrahdyroindazole as hsp90 inhibitors containing a zinc binding moiety
WO2009114470A2 (en) * 2008-03-10 2009-09-17 Curis, Inc. Tetrahydroindole and tetrahdyroindazole as hsp90 inhibitors containing a zinc binding moiety
US7989482B2 (en) 2008-04-29 2011-08-02 Joyant Pharmaceuticals, Inc. Indoline anti-cancer agents
US8153619B2 (en) 2008-05-22 2012-04-10 Joyant Pharmaceuticals, Inc. Diazonamide analogs
US8722703B2 (en) 2009-01-16 2014-05-13 Curis, Inc. Fused amino pyridines for the treatment of brain tumors
RU2520966C2 (en) * 2009-02-25 2014-06-27 Дайити Санкио Компани, Лимитед Tricyclic pyrazolopyrimidine derivative
US8236813B2 (en) 2009-02-25 2012-08-07 Daiichi Sankyo Company, Limited Tricyclic pyrazolopyrimidine derivatives
WO2010098344A1 (en) 2009-02-25 2010-09-02 第一三共株式会社 Tricyclic pyrazolopyrimidine derivative
US8445504B2 (en) 2009-02-25 2013-05-21 Daiichi Sankyo Company, Limited Tricyclic pyrazolopyrimidine derivatives
TWI460177B (en) * 2009-07-10 2014-11-11 Taiho Pharmaceutical Co Ltd An azabicyclo compound or a salt
EP2784076A1 (en) 2009-10-28 2014-10-01 Joyant Pharmaceuticals, Inc. Dimeric SMAC mimetics
US8685974B2 (en) 2009-12-21 2014-04-01 Bayer Cropscience Ag Thienylpyri(mi)dinylazole
WO2011076725A1 (en) 2009-12-21 2011-06-30 Bayer Cropscience Ag Thienylpyri (mi) dinylazole and their use for controlling phytopathogenic fungi
EP2571361A1 (en) * 2010-05-19 2013-03-27 The University of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
US9744172B2 (en) 2010-05-19 2017-08-29 The University Of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
EP2571361A4 (en) * 2010-05-19 2013-11-13 Univ North Carolina PYRAZOLOPYRIMIDINE COMPOUNDS FOR THE TREATMENT OF CANCER
US9290499B2 (en) 2010-05-19 2016-03-22 The University Of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
EP2810945A1 (en) 2010-08-23 2014-12-10 Daiichi Sankyo Company, Limited Dihydrochloride salt of a tricyclic pyrazolopyrimidine derivative
US8815880B2 (en) 2010-08-23 2014-08-26 Daiichi Sankyo Company, Limited Crystal of tricyclic pyrazolopyrimidine derivative
WO2012026433A1 (en) 2010-08-23 2012-03-01 第一三共株式会社 Free crystal of tricyclic pyrazolopyrimidine derivative
US8846703B2 (en) 2010-08-23 2014-09-30 Daiichi Sankyo Company, Limited Crystal of a free tricyclic pyrazolopyrimidine derivative
WO2012026434A1 (en) 2010-08-23 2012-03-01 第一三共株式会社 Crystal of tricyclic pyrazolopyrimidine derivative
US9512111B2 (en) 2010-11-08 2016-12-06 Lycera Corporation N-sulfonylated tetrahydroquinolines and related bicyclic compounds for inhibition of RORγ activity and the treatment of disease
WO2012083181A1 (en) * 2010-12-16 2012-06-21 Indiana University Research And Technology Corporation Alpha helix mimetics and methods for using
US10213427B2 (en) 2010-12-22 2019-02-26 Incyte Corporation Substituted imidazopyridazines and benzimidazoles as inhibitors of FGFR3
US10813930B2 (en) 2010-12-22 2020-10-27 Incyte Corporation Substituted imidazopyridazines and benzimidazoles as inhibitors of FGFR3
US8362023B2 (en) 2011-01-19 2013-01-29 Hoffmann-La Roche Inc. Pyrazolo pyrimidines
WO2012145255A2 (en) 2011-04-22 2012-10-26 Joyant Pharmaceuticals, Inc. Diazonamide analogs
US8980911B2 (en) 2011-05-26 2015-03-17 Daiichi Sankyo Company, Limited Heterocyclic compounds as protein kinase inhibitors
US9364466B2 (en) 2011-05-26 2016-06-14 Daiichi Sankyo Company, Limited Heterocyclic compounds as protein kinase inhibitors
WO2012160464A1 (en) 2011-05-26 2012-11-29 Daiichi Sankyo Company, Limited Heterocyclic compounds as protein kinase inhibitors
US9309250B2 (en) 2011-06-22 2016-04-12 Vertex Pharmaceuticals Incorporated Substituted pyrrolo[2,3-b]pyrazines as ATR kinase inhibitors
US20140243359A1 (en) * 2011-07-20 2014-08-28 Medestea Research & Production S.P.A. Adenine derivatives having immunomodulating anti-inflammatory and analgesic activity
US9273056B2 (en) 2011-10-03 2016-03-01 The University Of North Carolina At Chapel Hill Pyrrolopyrimidine compounds for the treatment of cancer
US9795606B2 (en) 2011-10-03 2017-10-24 The University Of North Carolina At Chapel Hill Pyrrolopyrimidine compounds for the treatment of cancer
US9657033B2 (en) 2012-05-08 2017-05-23 Lycera Corporation Tetrahydronaphthyridine and related bicyclic compounds for inhibition of RORγ activity and the treatment of disease
US9802958B2 (en) 2012-05-08 2017-10-31 Lycera Corporation Tetrahydro[1,8]naphthyridine sulfonamide and related compounds for use as agonists of RORy and the treatment of disease
US10208061B2 (en) 2012-05-08 2019-02-19 Lycera Corporation Tetrahydro[1,8]naphthyridine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10377768B2 (en) 2012-05-08 2019-08-13 Lycera Corporation Tetrahydronaphthyridine and related bicyclic compounds for inhibition of RORgamma activity and the treatment of disease
US9394315B2 (en) 2012-05-08 2016-07-19 Lycera Corporation Tetrahydro[1,8]naphthyridine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US9567326B2 (en) 2012-05-22 2017-02-14 The University Of North Carolina At Chapel Hill Pyrimidine compounds for the treatment of cancer
US11840534B2 (en) 2012-06-13 2023-12-12 Incyte Corporation Substituted tricyclic compounds as FGFR inhibitors
US11053246B2 (en) 2012-06-13 2021-07-06 Incyte Corporation Substituted tricyclic compounds as FGFR inhibitors
US10131667B2 (en) 2012-06-13 2018-11-20 Incyte Corporation Substituted tricyclic compounds as FGFR inhibitors
US9611267B2 (en) 2012-06-13 2017-04-04 Incyte Holdings Corporation Substituted tricyclic compounds as FGFR inhibitors
US9745311B2 (en) 2012-08-10 2017-08-29 Incyte Corporation Substituted pyrrolo[2,3-b]pyrazines as FGFR inhibitors
EP3795694A2 (en) 2012-10-02 2021-03-24 The General Hospital Corporation d/b/a Massachusetts General Hospital Methods relating to dna-sensing pathway related conditions
WO2014055624A1 (en) 2012-10-02 2014-04-10 The General Hospital Corporation D/B/A Massachusetts General Hospital Methods relating to dna-sensing pathway related conditions
US9163021B2 (en) 2012-10-04 2015-10-20 Pfizer Limited Pyrrolo[3,2-c]pyridine tropomyosin-related kinase inhibitors
US9562047B2 (en) 2012-10-17 2017-02-07 The University Of North Carolina At Chapel Hill Pyrazolopyrimidine compounds for the treatment of cancer
US9771330B2 (en) 2012-11-27 2017-09-26 The University Of North Carolina At Chapel Hill Pyrimidine compounds for the treatment of cancer
US10392391B2 (en) 2012-12-07 2019-08-27 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9340546B2 (en) 2012-12-07 2016-05-17 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10787452B2 (en) 2012-12-07 2020-09-29 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US12187731B2 (en) 2012-12-07 2025-01-07 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US11117900B2 (en) 2012-12-07 2021-09-14 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9650381B2 (en) 2012-12-07 2017-05-16 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9718827B2 (en) 2012-12-07 2017-08-01 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US11370798B2 (en) 2012-12-07 2022-06-28 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US8957078B2 (en) 2013-03-15 2015-02-17 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
WO2014145576A2 (en) * 2013-03-15 2014-09-18 Northwestern University Substituted pyrrolo(2,3-d)pyrimidines for the treatment of cancer
US8969360B2 (en) 2013-03-15 2015-03-03 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
WO2014145576A3 (en) * 2013-03-15 2014-12-18 Northwestern University Substituted pyrrolo(2,3-d)pyrimidines for the treatment of cancer
US9981968B2 (en) 2013-03-15 2018-05-29 Northwestern University Substituted pyrrolo[2,3-d]pyrimidines for the treatment of cancer and proliferative disorders
US9663519B2 (en) 2013-03-15 2017-05-30 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10450313B2 (en) 2013-04-19 2019-10-22 Incyte Holdings Corporation Bicyclic heterocycles as FGFR inhibitors
US10040790B2 (en) 2013-04-19 2018-08-07 Incyte Holdings Corporation Bicyclic heterocycles as FGFR inhibitors
US11530214B2 (en) 2013-04-19 2022-12-20 Incyte Holdings Corporation Bicyclic heterocycles as FGFR inhibitors
US10947230B2 (en) 2013-04-19 2021-03-16 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US10815239B2 (en) 2013-12-06 2020-10-27 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10160760B2 (en) 2013-12-06 2018-12-25 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US11485739B2 (en) 2013-12-06 2022-11-01 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US9783511B2 (en) 2013-12-20 2017-10-10 Lycera Corporation Carbamate benzoxazine propionic acids and acid derivatives for modulation of RORgamma activity and the treatment of disease
US9663502B2 (en) 2013-12-20 2017-05-30 Lycera Corporation 2-Acylamidomethyl and sulfonylamidomethyl benzoxazine carbamates for inhibition of RORgamma activity and the treatment of disease
US9809561B2 (en) 2013-12-20 2017-11-07 Merck Sharp & Dohme Corp. Tetrahydronaphthyridine, benzoxazine, aza-benzoxazine and related bicyclic compounds for inhibition of RORgamma activity and the treatment of disease
US10221146B2 (en) 2013-12-20 2019-03-05 Lycera Corporation Tetrahydronaphthyridine, benzoxazine, aza-benzoxazine and related bicyclic compounds for inhibition of RORgamma activity and the treatment of disease
US10745364B2 (en) 2013-12-20 2020-08-18 Lycera Corporation Tetrahydronaphthyridine, benzoxazine, aza-benzoxazine and related bicyclic compounds for inhibition of RORgamma activity and the treatment of disease
US10532088B2 (en) 2014-02-27 2020-01-14 Lycera Corporation Adoptive cellular therapy using an agonist of retinoic acid receptor-related orphan receptor gamma and related therapeutic methods
WO2015140386A1 (en) * 2014-03-21 2015-09-24 Universidad De Granada Purine derivatives as dapk1 inhibitors
US10004755B2 (en) 2014-04-11 2018-06-26 The University Of North Carolina At Chapel Hill Therapeutic uses of selected pyrrolopyrimidine compounds with anti-mer tyrosine kinase activity
WO2015157128A1 (en) * 2014-04-11 2015-10-15 The University Of North Carolina At Chapel Hill Therapuetic uses of selected pyrrolopyrimidine compounds with anti-mer tyrosine kinase activity
US9555030B2 (en) 2014-04-11 2017-01-31 The University Of North Carolina At Chapel Hill Therapeutic uses of selected pyrazolopyrimidine compounds with anti-Mer tyrosine kinase activity
WO2015157123A1 (en) * 2014-04-11 2015-10-15 The University Of North Carolina At Chapel Hill Mertk-specific pyrrolopyrimidine compounds
WO2015157127A1 (en) * 2014-04-11 2015-10-15 The University Of North Carolina At Chapel Hill Therapuetic uses of selected pyrimidine compounds with anti-mer tyrosine kinase activity
US9555031B2 (en) 2014-04-11 2017-01-31 The University Of North Carolina At Chapel Hill Therapeutic uses of selected pyrrolopyrimidine compounds with anti-mer tyrosine kinase activity
US9603850B2 (en) 2014-04-11 2017-03-28 The University Of North Carolina At Chapel Hill MerTK-specific pyrazolopyrimidine compounds
US9649309B2 (en) 2014-04-11 2017-05-16 The University Of North Carolina At Chapel Hill Therapeutic uses of selected pyrimidine compounds with anti-Mer tyrosine kinase activity
US9896441B2 (en) 2014-05-05 2018-02-20 Lycera Corporation Tetrahydroquinoline sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10442798B2 (en) 2014-05-05 2019-10-15 Lycera Corporation Tetrahydroquinoline sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10189777B2 (en) 2014-05-05 2019-01-29 Lycera Corporation Benzenesulfonamido and related compounds for use as agonists of RORγ and the treatment of disease
US10364237B2 (en) 2014-05-05 2019-07-30 Lycera Corporation Tetrahydroquinoline sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US9670215B2 (en) 2014-06-05 2017-06-06 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10800781B2 (en) 2014-06-05 2020-10-13 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US10093676B2 (en) 2014-06-05 2018-10-09 Vertex Pharmaceuticals Incorporated Compounds useful as inhibitors of ATR kinase
US11179394B2 (en) 2014-06-17 2021-11-23 Vertex Pharmaceuticals Incorporated Method for treating cancer using a combination of Chk1 and ATR inhibitors
US10851105B2 (en) 2014-10-22 2020-12-01 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
KR20160059366A (en) * 2014-11-18 2016-05-26 한국과학기술연구원 Novel pyrrolo pyrimidine derivatives and composition for preventing or treating cancer comprising the same
US10221142B2 (en) 2015-02-11 2019-03-05 Merck Sharp & Dohme Corp. Substituted pyrazole compounds as RORgammaT inhibitors and uses thereof
US9708318B2 (en) 2015-02-20 2017-07-18 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US11667635B2 (en) 2015-02-20 2023-06-06 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10214528B2 (en) 2015-02-20 2019-02-26 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10632126B2 (en) 2015-02-20 2020-04-28 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US11173162B2 (en) 2015-02-20 2021-11-16 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US9890156B2 (en) 2015-02-20 2018-02-13 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10738048B2 (en) 2015-02-20 2020-08-11 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US11014923B2 (en) 2015-02-20 2021-05-25 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US9801889B2 (en) 2015-02-20 2017-10-31 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10251892B2 (en) 2015-02-20 2019-04-09 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10016438B2 (en) 2015-02-20 2018-07-10 Incyte Corporation Bicyclic heterocycles as FGFR4 inhibitors
US10421751B2 (en) 2015-05-05 2019-09-24 Lycera Corporation Dihydro-2H-benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US11059796B2 (en) 2015-06-11 2021-07-13 The Regents Of The University Of Michigan Aryl dihydro-2H benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US10611740B2 (en) 2015-06-11 2020-04-07 Lycera Corporation Aryl dihydro-2H-benzo[b][1,4]oxazine sulfonamide and related compounds for use as agonists of RORγ and the treatment of disease
US11274108B2 (en) 2015-07-20 2022-03-15 Genzyme Corporation Colony stimulating factor-1 receptor (CSF-1R) inhibitors
US11464774B2 (en) 2015-09-30 2022-10-11 Vertex Pharmaceuticals Incorporated Method for treating cancer using a combination of DNA damaging agents and ATR inhibitors
US10287272B2 (en) 2015-10-27 2019-05-14 Merck Sharp & Dohme Corp. Substituted indazole compounds as RORgammaT inhibitors and uses thereof
US10344000B2 (en) 2015-10-27 2019-07-09 Merck Sharp & Dohme Corp. Substituted bicyclic pyrazole compounds as RORgammaT inhibitors and uses thereof
US10584121B2 (en) 2015-10-27 2020-03-10 Merck Sharp & Dohme Corp. Heteroaryl substituted benzoic acids as RORgammaT inhibitors and uses thereof
US10689369B2 (en) 2015-10-27 2020-06-23 Merck Sharp & Dohme Corp. Substituted indazole compounds as RORgammaT inhibitors and uses thereof
US10709708B2 (en) 2016-03-17 2020-07-14 The University Of North Carolina At Chapel Hill Method of treating cancer with a combination of MER tyrosine kinase inhibitor and an epidermal growth factor receptor (EGFR) inhibitor
KR101896616B1 (en) * 2016-10-11 2018-09-07 한국과학기술연구원 2-Amino-purine derivative compound, preparing method and use thereof
KR20180040037A (en) * 2016-10-11 2018-04-19 한국과학기술연구원 2-Amino-purine derivative compound, preparing method and use thereof
KR102053933B1 (en) * 2016-10-26 2019-12-11 울산과학기술원 Compound as TRAP1 inhibitor and pharmaceutical composition for anticancer comprising the same
KR20180045781A (en) * 2016-10-26 2018-05-04 울산과학기술원 Compound as TRAP1 inhibitor and pharmaceutical composition for anticancer comprising the same
WO2018079988A1 (en) * 2016-10-26 2018-05-03 울산과학기술원 Compound useful as trap1 inhibitor, and anticancer composition containing same
US11472801B2 (en) 2017-05-26 2022-10-18 Incyte Corporation Crystalline forms of a FGFR inhibitor and processes for preparing the same
US10611762B2 (en) 2017-05-26 2020-04-07 Incyte Corporation Crystalline forms of a FGFR inhibitor and processes for preparing the same
FR3075794A1 (en) * 2017-12-21 2019-06-28 Galderma Research & Development NEW MTOR INHIBITOR COMPOUNDS
US11518767B2 (en) 2017-12-21 2022-12-06 Galderma Research & Development MTOR inhibitor compounds
AU2018391799B2 (en) * 2017-12-21 2023-05-18 Galderma Research & Development Novel mTOR inhibitor compounds
US11731973B2 (en) 2017-12-21 2023-08-22 Galderma Research & Development Substituted pyrazolo[3,4-d]pyrimidines as mTOR inhibitors
WO2019122059A1 (en) * 2017-12-21 2019-06-27 Galderma Research & Development Novel mtor inhibitor compounds
US11261192B2 (en) 2018-03-09 2022-03-01 Recurium Ip Holdings, Llc Substituted 1,2-dihydro-3H-pyrazolo[3,4-D]pyrimidin-3-ones
US11466004B2 (en) 2018-05-04 2022-10-11 Incyte Corporation Solid forms of an FGFR inhibitor and processes for preparing the same
US11174257B2 (en) 2018-05-04 2021-11-16 Incyte Corporation Salts of an FGFR inhibitor
US12024517B2 (en) 2018-05-04 2024-07-02 Incyte Corporation Salts of an FGFR inhibitor
US11628162B2 (en) 2019-03-08 2023-04-18 Incyte Corporation Methods of treating cancer with an FGFR inhibitor
US12122767B2 (en) 2019-10-01 2024-10-22 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US11607416B2 (en) 2019-10-14 2023-03-21 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US12083124B2 (en) 2019-10-14 2024-09-10 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
US11897891B2 (en) 2019-12-04 2024-02-13 Incyte Corporation Tricyclic heterocycles as FGFR inhibitors
US11407750B2 (en) 2019-12-04 2022-08-09 Incyte Corporation Derivatives of an FGFR inhibitor
US12168660B2 (en) 2019-12-04 2024-12-17 Incyte Corporation Derivatives of an FGFR inhibitor
US12012409B2 (en) 2020-01-15 2024-06-18 Incyte Corporation Bicyclic heterocycles as FGFR inhibitors
KR102516260B1 (en) * 2020-07-10 2023-03-31 울산과학기술원 Compounds as a TRAP1 selective inhibitor, and composition for preventing or treating cancer comprising the same
KR20220007447A (en) * 2020-07-10 2022-01-18 이화여자대학교 산학협력단 Compounds as a TRAP1 selective inhibitor, and composition for preventing or treating cancer comprising the same
US11530216B2 (en) 2020-12-23 2022-12-20 Genzyme Corporation Deuterated colony stimulating factor-1 receptor (CSF-1R) inhibitors
US12065494B2 (en) 2021-04-12 2024-08-20 Incyte Corporation Combination therapy comprising an FGFR inhibitor and a Nectin-4 targeting agent
US11939331B2 (en) 2021-06-09 2024-03-26 Incyte Corporation Tricyclic heterocycles as FGFR inhibitors

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