WO2001066716A1 - Polypeptide having phosphodiesterase activity - Google Patents
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- WO2001066716A1 WO2001066716A1 PCT/JP2001/001720 JP0101720W WO0166716A1 WO 2001066716 A1 WO2001066716 A1 WO 2001066716A1 JP 0101720 W JP0101720 W JP 0101720W WO 0166716 A1 WO0166716 A1 WO 0166716A1
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Definitions
- the present invention relates to a novel phosphodiesterase polypeptide, a DNA encoding the polypeptide, a vector containing the DNA, a transformant transformed with the vector, and a method for producing the phosphodiesterase polypeptide. .
- the present invention also relates to a method for using the polypeptide, for example, a method for screening for a compound having agonistic or angonist activity using the polypeptide or an antibody thereof, and a medicament containing the polypeptide or an antibody thereof.
- Linear nucleotides are known to mediate cellular responses to many extracellular stimuli, including stimuli from G protein-coupled receptors (GPCRs).
- Cyclic nucleotide phosphodiesterase (PDE) hydrolyzes 3,, 5, and monocyclic nucleotides such as 3,5,5 monocyclic adenosine monophosphate (cAMP) and 3,5,5-cyclic guanosine monophosphate (cGMP).
- PDE Cyclic nucleotide phosphodiesterase
- cAMP 3,5,5 monocyclic adenosine monophosphate
- cGMP 3,5,5-cyclic guanosine monophosphate
- PDE is, c AMP and cGMP concentration
- the further regulate the magnitude and duration of signals through cyclic nucleotides number of experimental results from PDE activity other signals at steady state intracellular It has been shown to be controlled by a variety of information from the transduction system, occupying an important position in the "cross-talk" between signal transduction pathways and intracellular control networks [Trend. Pharmacol. Sci., 2i, 217 (1997), Physiol. Rev., 75, 725 (1995), Arch.Biochem. Biopys. 3 322, 1 (1995), and Endocrinol. Rev., 16, 370 (1995)] .
- Vertebrate PDEs have structure, localization, regulation, selective PDEP and sensitivity to harmful agents, etc.
- cAMP PDE cGMP PDE inhibited by cAMP PDE 10
- PDE 10 Many families consist of subtypes encoded by different genes and their splice variants (isoforms) [Kidney International, 55, 29 (1999), Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990), and Biochem. Biophys. Res. Commun., 261, 551 (1999)]. Tissue and cell-specific expression has been reported for several PDE isoforms [Trend. Pharmacol. Sci., 22, 217 (1997), Physiol. Rev., 75, 725 (1995), and Arch. Biochem. Biophys., 32, 1 (1995)]. To date, more than 30 species of PDE have been reported, but more unknown PDEs are expected.
- PDEs usually have a structure consisting of three functional domains (Trend.
- the region consisting of about 270 amino acids (catalytic core domain) existing from the center to the C-terminal side is conserved in all vertebrate-derived PDEs and constitutes the catalytic domain. This region is well conserved between genes within individual PDE families, with over 80% identity in the amino acid sequence. In addition, amino acid sequences of about 25% to 40% are identical between different PDE gene families. Although two Zn 2+ binding motifs exist in the catalytic core domain (J. Biol.
- the catalytic core domain of one of the PDE3 families contains other PDE families.
- the first Zn 2+ binding motif has been destroyed due to the insertion of a 44 amino acid that is not present in the cell.
- a conserved motif of HDXXHXXXXN amino acid residues are represented by one letter; H; histidine, D; aspartic acid, N; asparagin, X; any amino acid residue) is found in the catalytic domain of all PDEs. Have been.
- the region containing the catalytic core domain of PDE 4 was expressed in E. coli and was shown to have PDE activity [J. Biol. Chem., ML, 18929 (1992)].
- the conserved catalytic domain contains sequences that define the specificity of the PDE family for substrate affinity and sensitivity to inhibitors. CJ. Biol. Chem., 274, 4839 (1999)]. While the catalytic domain is well conserved, the ⁇ ⁇ terminal regulatory domain is PD ⁇ The structure and size differ between subtypes and isoforms [Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990)].
- This domain contains ligand binding sites, phosphorylation sites, membrane binding sites, sequences involved in protein-protein interactions, and the like. Fully clear the functional significance of relatively small C-terminal domains It has not been. It has been reported that the serine residue at position 487 of the PDE4B2B isoform is phosphorylated by mitogen-activated protein kinase (Biochem. J., 316, 751 (1996)).
- PDE subtype or isoform-specific agonists or antagonists are expected to have a prophylactic or therapeutic effect on a variety of diseases involving variations in intracellular cyclic nucleotide levels. For example, many functions related to the immune and inflammatory responses are inhibited by agents that increase intracellular cAMP [Mol. Pharmacol., 47, 1164 (1995)]. On the other hand, cGMP is involved in the functions of smooth muscle, lung and brain cells. CPharmac. Ther., 51, 13 (1991)]. Non-specific PDE inhibitors and inhibitors that are selective for PDE subtypes have been synthesized, and some of them have been studied experimentally or clinically for their therapeutic potential [ Trends Pharmacol.
- PDE 3 inhibitors have been developed as antithrombotic agents, antihypertensive agents, and inotropic agents useful in treating depressive heart failure. Recently, it has been reported that PDE 3B is involved in the inhibition of insulin secretion by lebutin [J. Clin. Invest., ⁇ , 869 (1998)]. As a PDE 4 inhibitor, rolipram has been used as a therapeutic agent for depression. TNF-Hi
- HIV-1 replication may be inhibited by suppressing TNF-production by lipopolysaccharide stimulation [AIDS, 9, 1137 (1995)].
- it has activity to suppress the production of cytokines such as TNF- and inuichi-feron-a, so it can be used for encephalomyelitis (encephalomyelitis ⁇ multiple sclerosis (MS), tardive dyskinesia, etc.)
- PDE 4 inhibitors have anti-inflammatory effects and are expected to be used as therapeutic agents for rheumatism, etc.
- they have anti-inflammatory effects as well as bronchodilator effects, and as therapeutic agents for asthma.
- PDE PDE 3 inhibitor
- mesangial cells a PDE 3 inhibitor
- mesangial cells a PDE 3 inhibitor
- Inhibits the production of reactive oxygen metabolites J. Biol. Chem., 272, 9854 (1997).
- PDE inhibitors have been shown to suppress the development of proteinuria in anti-Thy-1 nephritis rats [J. Clin. Invest., 98, 262 (1996)].
- Non-specific drugs are less desirable because their effects on cAMP or cGMP-mediated signaling in tissues and cells other than the target tissue and cells are problematic.
- An object of the present invention is to provide a novel PDE polypeptide and a DNA encoding the PDE polypeptide.
- the present invention also provides diabetes, ischemic heart disease, hypertension, nephritis, nephritis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety using the PDE polypeptide or an antibody recognizing the polypeptide. It is an object of the present invention to provide a medicament for preventing and / or treating symptom, fibrosis, manic depression, Parkinson's disease, dementia, infectious disease or malignant tumor.
- the present inventors prepared a cDNA library from HepG2 cells and randomly analyzed a base sequence. Based on the gene sequence information of human PDE10A (GenBank: AB020593), the human cDNA sequence thus obtained was analyzed using BLAST search homology search software, and the catalytic sites of human PDE10A and human PDE5A were analyzed. A partial sequence having homology with was found. By analyzing these sequences, expressing the polypeptide and detecting the PDE activity, the present invention has been completed.
- the present invention relates to the following inventions (1) to (33).
- a polypeptide comprising the amino acid sequence of SEQ ID NO: 1 or SEQ ID NO: 15.
- transformant is a transformant selected from the group consisting of microorganisms, animal cells, plant cells, and insect cells.
- the transformant according to any one of (5) to (8) is cultured in a medium, the polypeptide described in (1) is produced and accumulated in the culture, and the polypeptide is isolated from the culture.
- Oligonucleotide derivative is an oligonucleotide derivative in which the phosphoric ester bond in the oligonucleotide is converted to a phosphorothioate bond, and the phosphodiester bond in the oligonucleotide is N3, -P5 'phosphoramidite.
- Oligonucleotide derivative converted to date bond Oligonucleotide derivative in which ribose and phosphodiester bond in oligonucleotide are converted to peptide nucleic acid bond
- Peracyl in oligonucleotide is C-15 provinylperacyl
- Oligonucleotide derivative in which oligosaccharide in oligonucleotide is substituted with C-15 thiazoleperacyl Oligonucleotide derivative in which cytosine in oligonucleotide is substituted with C-5 propynylcytosine, oligo In nucleotides Tosin is phenoxazine-modified cytosine (
- Oligonucleotide derivatives substituted with phenoxazine-modified cytosine Oligonucleotide derivatives substituted with phenoxazine-modified cytosine
- oligoribonucleotide derivatives in which the ribose in DNA is substituted with 2,10-propylribose oligoribonucleotide derivatives in which the ribose in DNA is substituted with 2,10-propylribose
- ribose in the oligonucleotide with 2'-methoxyethoxy ribose The oligonucleotide according to (10), which is an oligonucleotide derivative selected from the group consisting of substituted oligonucleotide derivatives.
- a method for detecting mRNA encoding the polypeptide according to (1) comprising using the oligonucleotide according to (10) or (11).
- the method for suppressing the expression of the polypeptide according to (1) comprising using the oligonucleotide according to (10) or (11.).
- a method for screening a compound that varies the phosphodiesterase activity of the polypeptide which comprises contacting the polypeptide according to (1) with a test sample.
- a method for screening a compound that changes the expression of a gene encoding the polypeptide comprising contacting a cell that expresses the polypeptide according to (1) with a test sample.
- test sample is contacted with a transformant having the promoter DNA described in (24) and a plasmid containing the repo overnight gene linked downstream of the promoter DNA. Measuring the translation product content of the reporter gene. A method for screening a compound which varies the efficiency of transcription by said promoter.
- the repo overnight gene is the chloramphenicone acetyltransferase gene, the galactosidase gene, the luciferase gene, the ' ⁇ -glucuronidase gene, the equorin gene, and the green fluorescent protein.
- a medicament comprising the compound according to (19), (23) or (27). : (32) Diabetes, ischemic heart disease, hypertension, nephritis, Tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease or malignancy From (28), which is a medicament for the prevention or treatment of tumors
- Figure 1 shows a comparison between the amino acid sequence of the new human PDE (upper row: amino acid numbers are indicated by numbers + and) and the amino acid sequence of human PDE5A (GenBank: CAA06170) (lower row: amino acid numbers are indicated by numbers + ").
- An asterisk indicates a matching amino acid residue, and a period indicates a homologous amino acid residue.
- Figure 2 shows the amino acid sequence of the new human PDE (upper row: the amino acid number is indicated by a number +,) and the amino acid sequence of the hPDE10A (GenBank: BAA78034) (lower row: the amino acid number is a number)
- An asterisk indicates a matching amino acid residue, and a period indicates a homologous amino acid residue. (Aminoic acid residues are indicated by one letter.) The underline indicates the HDXXHXXXXN motif.
- FIG. 3 shows the construction process of plasmid P200-EB and a restriction enzyme map.
- Fig. 4 shows a poly (A) + MA file of human heart, brain, placenta, lung, liver, skeletal muscle, kidney, and knee using a partial sequence (about 0.2 kb) of the novel human PDE homolog cDNA as a probe. -Filtration of CHurnan Multiple Tissue Northern Blots (Clontech)] and poly (A) + RNA filter of human heart, brain, liver, kidney, placenta and lung [Human Normal Tissue mENA blot I (Normalized) filter]
- FIG. 7 is a diagram showing the results of performing Northern Hybridization on Yuichi (Toyobo Co., Ltd.).
- FIG. 5 is a diagram showing a construction process of a plasmid pGST-PDE and a restriction enzyme map.
- FIG. 6 shows the results of PDE activity measurement in the expressed E. coli soluble fraction.
- GST indicates Escherichia coli transfected with only black and white
- GST-PDE indicates Escherichia coli expressing the GST-PDE fusion protein.
- FIG. 7 is a diagram showing the construction process of plasmids p23-2k and p23-lk and a restriction enzyme map.
- FIG. 8 is a diagram showing a comparison between the amino acid sequence of the novel human PDE (upper) and the amino acid sequence of human PDE5A (GenBank: CAA06170) (lower). Asterisks indicate identical amino acid residues, and periods indicate homologous amino acid residues. (Amino acid residues are indicated by single letter notation.) Underline indicates HDXXHXXXXN motif.
- Figure 9 shows the ⁇ (3 ⁇ 4 primer designed based on the sequence information of the novel human PDE homolog cDNA, and the cDNA prepared from mMA of human tissues of the kidney, lung, mammary gland, prostate, skeletal muscle, and testis. PCR was performed and the results of agarose electrophoresis of the amplified product are shown.
- kb indicates kilobase pairs
- Ap indicates an ampicillin resistance gene
- T7 indicates a T7 promoter
- GST indicates glutransthione S trans.
- polypeptide of the present invention is characterized by comprising any one of the following amino acid sequences.
- a polypeptide comprising the amino acid sequence of SEQ ID NO: 1 or Rooster S, which has at least one amino acid deleted, substituted or added in SEQ ID NO: 15, and having phosphodiesterase (PDE) activity Molecular Cloning, A Laboratory Manual, Second Edition, Cold Spring Harbor Laboratory Press (1989) (hereinafter abbreviated as Molecular Cloning 2nd Edition), Current Protocols in Molecular Biology, Supplement 1-38, John Wiley & Sons (1987 -1997) (hereinafter abbreviated as current 'protocol' in 'molekiura' biology), Nucleic Acids Research, 10, 6487 (1982), Proc. Natl. Acad. Sci.
- PDE phosphodiesterase
- the number of amino acids to be deleted, substituted or added is not particularly limited, it is a number that can be deleted, substituted or added by a well-known method such as the above-described site-directed mutagenesis method, and is one to several tens. The number is preferably 1 to 20, more preferably 1 to 10, and still more preferably 1 to 5. Further, in order for the polypeptide of the present invention to have phosphodiesterase activity, the homology with the amino acid sequence of SEQ ID NO: 1 or 15 is determined by BLAST [
- the present invention also provides a DNA encoding the above-mentioned polypeptide of the present invention.
- Specific examples of the DNA encoding the polypeptide of the present invention include DNA having any one of the following nucleotide sequences.
- base sequence encoding a polypeptide that hybridizes under stringent conditions and has phosphodiesterase activity refers to a DNA having the base sequence of SEQ ID NO: 2 or SEQ ID NO: 16 as a probe.
- Colony-hybridization method plaque; DNA obtained by using the hybridization method or Southern blot hybridization method, specifically, DNA derived from a colony or plaque.
- the SSC 0.1- to 2-fold concentration
- saline-sodium citrate solution (the composition of a 1x concentration SSC solution is composed of 15 Ommo 1 / L sodium chloride and 15 mmo 1 / L sodium citrate), and fill at 65 ° C. Can be identified by washing the DNA.
- DNA that can be hybridized is calculated using analysis software such as BLAST (J. Mol. BioL, 215, 403, 1990) and FASTA (Methods in Enzymology, 183, 63-69).
- BLAST J. Mol. BioL, 215, 403, 1990
- FASTA Methods in Enzymology, 183, 63-69
- the public database such as GenBank and Swiss_Plot can be used as the database.
- the origin of the DNA of the present invention is not particularly limited, but is preferably a mammal, and particularly preferably a human.
- RNA Total RNA from appropriate cells or tissues to create a DNA library Alternatively, prepare mRNA.
- RNA guanidine thiocyanate-cesium trifluoroacetate method [Methods in Enzymology, 154, 3 (1987)], acid guanidine thiochanetone 'phenol' Cloguchiform (AGPC) method [AnalyticaI Biochemistry, 162 5 156 (1987), and Experimental Medicine 1937 (1991)].
- Methods for preparing mRNA as poly (A) + RNA from total RNA include the Oligo (dT) immobilized cellulose column method (Molecular 'Cloning 2nd Edition') and a method using oligo dT latex. it can.
- Kits such as Fast Track mRNA Isolation Kit (Fast Track mRNA Isolation Kit; manufactured by Iiwitrogen) and Quick Prep mRNA purification kit (Quick Prep mRNA Purification Kit; manufactured by Pharmacia) It can also be used to prepare mRNA directly from tissues or cells.
- a cDNA library is prepared by an ordinary method.
- Large intestine is used as a cloning vector for preparing a cDNA library.
- Any phage vector, plasmid vector, etc. can be used as long as they can replicate autonomously in the bacterial K12 strain.
- any microorganism belonging to Escherichia coli can be used. Specifically, Escherichia coli XL Bok Blue MRF, [Stora evening Gene Co., Strategies, 5 3 81 (1992 ) ], Escherichia coli C6QQ [Genetics,
- Examples of commercially available cDNA libraries include cDNA libraries of various organs derived from humans, mice, rats, rats, and egrets, such as Clothtec and Lifetech Oriental.
- the DNA of the present invention or a cDNA clone containing a part thereof was isolated or labeled with a fluorescent probe.
- a primer prepared based on the nucleotide sequence can be used as the primer.
- An adapter is added to both ends of the cDNA, and PCR is performed with a primer based on the base sequence partially identifiable with the base sequence of this adapter.5'-RACE (rapid amplification of cDNA ends) and 3,-RACE [Proc. Natl. Acad. Sci. USA, 85 3 8998 (1988)] to obtain cDNA fragments at the 5 'end and the 3' end from the sequence used for the primer. be able to.
- the full-length DNA of the present invention can be obtained.
- a cDNA encoding the full-length polypeptide may be obtained as follows. it can.
- a single-stranded cDNA library derived from various organs or cells can be prepared according to a conventional method or a standard kit. For example, it can be prepared by the following method.
- RNA is extracted from various organs or cells by the guanidium thiosinate phenol chloroform method [Anal. Biochem., 162, 156 (1987)]. If necessary, treat all RNAs with Deoxyribonuclease I (Life Technologies) to degrade chromosomal DNA that may be contaminated. For each of the obtained total RNAs, a single-stranded cDNA library can be prepared by using the SUPERSCRIPT TM Preamplification System for First Strand cDNA System (manufactured by Life Technologies) using oligo (dT) primers or random primers.
- SUPERSCRIPT TM Preamplification System for First Strand cDNA System manufactured by Life Technologies
- oligo (dT) primers or random primers random primers.
- the nucleotide sequence of DNA was obtained by digesting the DNA fragment as it is or by using an appropriate restriction enzyme or the like, and incorporating the fragment into a vector by a conventional method. Sanger) et al. [Proc. Natl. Acad. Sci. USA, 74, 5463 (1977)] or Perkin Elmer: 373A DNA Sequencer, Pharmacia, Lycoa It can be determined by analysis using a base sequence analyzer such as (LI-C0R).
- Examples of the plasmid containing the DNA of the present invention and a part thereof obtained by the above method include, for example, plasmid hepl0314 having a part of the DNA consisting of the base sequence represented by SEQ ID NO: 2, and SEQ ID NO: 16 And plasmids p23-lk and p23-2k having a part of the DNA consisting of the base sequence represented by
- Escherichia coli JM109 / hepl0314 containing plasmid hepl0314 was designated as FERM BP-6976 as of December 22, 1999 by the Institute of Life Science and Industrial Technology, National Institute of Advanced Industrial Science and Technology. Deposited with No. 3 (zip code 305-8566).
- the target DNA can also be prepared by chemical synthesis using a DNA synthesizer.
- the DNA synthesizer include a DNA synthesizer manufactured by Shimadzu Corporation using the thiophosphite method, and a DNA synthesizer mode 1392 manufactured by Perkin Elmer Inc. using the phosphoramidite method. it can.
- nucleotide sequence database such as GenBank, EMBL and DDBJ using a homology search program such as BLAST.
- the homology search programs such as FASTA and FrameSearch (FrameSearch) are used to search for amino acid sequences such as GenPept, PIR and Swiss-Prot. By searching, existing genes with homology can be searched.
- an antisense oligonucleotide having a partial sequence of the DNA of the present invention or a sense Oligonucleotides such as nucleotides can be prepared.
- oligonucleotide examples include a DNA having the same sequence as the consecutive 5 to 60 bases in the base sequence of the DNA or a DNA having a sequence complementary to the DNA.
- the above-mentioned oligonucleotides whose melting temperature (T m) and number of bases do not extremely change are preferred.
- I oligonucleotides include the oligonucleotides represented by SEQ ID NOS: 10, 11, 17, or 18.
- oligonucleotides can also be used as the oligonucleotide of the present invention.
- oligonucleotide derivatives include an oligonucleotide derivative wherein the phosphoric acid Jiesu ether bond in the oligonucleotide is converted to Hosuhorochioe Bok bond, a phosphodiester bond N 3 in O oligo nucleotides, - the P 5 5 Hosufoamide one preparative bond Converted oligonucleotide derivative, oligonucleotide derivative in which ribose and phosphodiester bond in oligonucleotide are converted to peptide nucleic acid bond, peracyl in oligonucleotide substituted with C-15 propynyl peracyl Oligonucleotide derivatives, Oligonucleotide derivatives in which peracyl in the oligonucleotide is substituted by C-15thiazo'-peruracil, Oligonucleotide derivatives in which cytosine in the oligonucleotide is substitute
- Oligonucleotide derivatives substituted with phenoxazine-modified cytosine Oligonucleotide derivatives substituted with 2,10-propylribose, or ribose in the oligonucleotide has been substituted with 2′-methoxetoxyribose Oligonucleotide derivatives, etc. [Cell Engineering, 16, 1463 (1997)].
- a recombinant vector expressing the polypeptide of the present invention is obtained by constructing a recombinant vector in which the DNA of the present invention is inserted downstream of an appropriate expression vector, and introducing the vector into a host cell.
- the polypeptide of the present invention can be produced by obtaining and culturing the transformant.
- the host cells any microorganisms (bacteria, yeast, etc.), animal cells, insect cells, plant cells, etc., can be used as long as they can express the gene of interest.
- the expression vector a vector capable of autonomously replicating in the above-mentioned host cell, capable of being integrated into a chromosome, and containing a promoter at a position capable of transcribing the DNA of the present invention is used.
- the polypeptide gene expression vector of the present invention is capable of autonomous replication in a prokaryote and has a promoter, a ribosome binding sequence, and a DNA of the present invention. And a recombination vector comprising a transcription termination sequence. A gene that controls the promoter overnight may be included.
- expression vectors include pB.Trp2, pBTAc Is pBTac2 (both commercially available from Boehringer Mannheim), PKK233-2 (Pharmacia), PSE280 (Invitrogen), pGEEX- ⁇ [Promega ( Promega), QE-8 (QIAGEN), pKYPIO (JP-A-58-U0600), pKYP200 (Agric. Biol. Chem., 8, 669 (1984)), pLSAl CAgric. Biol. Chem. , 53, 277 (1989)), pGELl [Pro Natl. Acad. Sci.
- the promoter may be any promoter that can be expressed in host cells such as Escherichia coli and Bacillus subtilis.
- promoters derived from Escherichia coli or phage such as ii ⁇ promoter overnight (Pii ⁇ ), lac promoter overnight (Plac), P L promoter, promoter overnight, T7 promoter overnight, etc. , SP01 Promoter, SP02 Promo Overnight, penP Promo Overnight, etc.
- the liposome binding sequence it is preferable to use a plasmid in which the distance between the Shine-Dalgarno sequence and the initiation codon is adjusted to an appropriate distance (for example, 6 to 18 bases).
- transcription termination sequence is not necessarily required for the expression of the DNA of the present invention, it is preferable to arrange the transcription termination sequence immediately below the structural gene.
- the host cell Eshierihia, Serratia, Bacillus, Burebibakute genus, Corynebacterium, the genus Microbacterium, microorganisms belonging to Shiyudomonasu genus like, for example, Escherichia coli XL1-Blue s Escherichia coli XL2-Blue, Escherichia coli Keio ⁇ Escherichia coli MC1000 S Escherichia coli KY3276, Escherichia coli W1485, Escherichia coli JM109, Escherichia coli HB101, Escherichia coli No.49, Escherichia coli W3110, Escherichia coli NY49, Serratia ficaria ⁇ Serratia fonticola, Serratia Iiguefaciens s Serratia marc6sc6ns , Bacillus subtil is, Bacillus amyloliquefaciens ⁇ Brevibacterium ammoniage
- Corynebacterium glutamicmn ATCC14Q67 S Corynebacterium glutamicum ATCC13869, Corynebacterium acetoacidophilum ATGC1387Q N Microbacterium ammoniaphilum ATCC15354, Pseudomonas sp. D- 0110 , or the like can be mentioned.
- Any method for introducing a recombinant vector can be used as long as it is a method for introducing DNA into the above host cells, for example, a method using lucidium ion [Proc. Natl. Acad. Sci. USA, 69, 2110 ( 1972)], protoplast method (JP-A-63-248394), electroporation method [Gene, 17, 107 (1982), Molecular & General Genetics, 168, ill (1979)].
- YEpl3 ATCC37115
- YEp24 ATCC37051
- YCp50 ATCC37419
- pHS19 pHS15, etc.
- Any promoter can be used as long as it can be expressed in yeast strains, such as PH05 Promo, PGK Promo, GAP Promo, ADH Promo, Promoters such as gal 1 promoter, gal 10 promoter, heat shock polypeptide promoter, MF 1 promoter, CUP 1 promoter, etc.
- any method can be used as long as it is a method for introducing DNA into yeast, and examples thereof include an electoporation method, Qiethods in Enzymology, 194, 182 (1990)) and a spheroplast method [ Proc. Natl. Acad. Sci. USA, 81, 4889 (1984)] and the lithium acetate method Journal of Bacteriology, 153, 163 (1983)].
- expression vectors such as pcDNA I / Amp (manufactured by Invitrogen), pcDNAI, pCDM8 (Nature, 329, 840 (1987)), pAGE107 [ Kaihei 3-22979, Cytotechnology, 3, 133 (1990)], pREP4 (Invitrogen), pAGE 103 (Journal of Biochemistry, 101, 1307 (1987)), pAMo, pAMoA, pAS3-3 (Special Kaihei 2) -227075) is used.
- any promoter can be used as long as it can be expressed in animal cells.
- the promoter of the IE (i-ediate early) gene of cytomegalovirus (CMV) can be used.
- CMV cytomegalovirus
- SV40 early promoter or metallothinin promoter can be used.
- retrovirus promoter can be used.
- heat shock promoter can be used.
- animal cells examples include mouse and mouse cells, rat's mouse cells, mouse 'hybrid cells, and human cells such as Namalwa cells or femalwa KJM-1 cells CCytotechnology, 1 3 151 (1988)], can be mentioned the human embryonic kidney cells, human leukemia cells, Afurikami Dorizaru kidney cells, CH0 cells is a cell of Chinese hamster, and HBT5637 (JP 63- 299) or the like.
- Mouse / myeloid cells include SP2 / 0, NS0, etc., Rat'myeloid cells, YB2 / 0, etc., and human embryonic kidney cells, such as HEK293 (ATCC: CRL-1573), human Examples of leukemia cells include BALL-1 and examples of African green monkey kidney cells include COS-1 and COS-7.
- any method for introducing DNA into animal cells can be used.
- the recombinant gene transfer vector and the baculovirus were co-transfected into bizoa cells to obtain the recombinant virus in the insect cell culture supernatant, and then the recombinant virus was infected to the insect cells, and Peptides can be expressed. '
- Examples of the gene transfer vector used in the method include pVL1392, pVL1393, pBlueBacIII (all manufactured by Invitrogen) and the like.
- Examples of baculoviruses are viruses that infect night roth moths, such as Atographa's force, Reformi force, Nuclea, polyhedrosis, and virus.
- Ru can Autographa caiiforaica nuclear polyhedrosis virus
- ovary cells of Spodoptera frugiperda ovary cells of Trichoplusia ni, cultured cells derived from silkworm ovary, and the like can be used.
- Spodoptera frugiperda ovary cells include Sf9 and Sf21 (baculovirus' Expression Vectors' Laboratory 'manual), etc. Bombyx mori M and the like can be mentioned as cultured cells derived from silkworm ovaries.
- Co-transfection of the above-described recombinant gene transfer vector and the above baculovirus into insect cells for preparing a recombinant virus includes, for example, a calcium phosphate method.
- a method for expressing a gene in addition to direct expression, secretory production, fusion protein expression, and the like can be performed according to the method described in Molecular 'Cloning, 2nd edition.
- sugar or sugar chain-added polypeptide When expressed by yeast, animal cells or insect cells, a sugar or sugar chain-added polypeptide can be obtained.
- the polypeptide of the present invention is produced by culturing the transformant obtained as described above in a medium, producing and accumulating the polypeptide of the present invention in a culture, and collecting the polypeptide from the culture. be able to.
- the cells are returned to the living body, thereby obtaining the polypeptide of the present invention.
- the peptide can also be expressed in a patient's body.
- the method of culturing the transformant of the present invention in a culture medium can be performed by a conventional method for culturing a host It can be done according to the method.
- a culture medium for culturing a transformant obtained by using a prokaryote such as Escherichia coli or a eukaryote such as yeast as a host contains a carbon source, a nitrogen source, inorganic salts, and the like which can be used by the organism. Either a natural medium or a synthetic medium can be used as long as the medium can be efficiently cultured.
- the carbon source may be any one that can be assimilated by the organism, such as glucose, fructose, sucrose, molasses containing these, carbohydrates such as starch or starch hydrolysate, and organic acids such as acetic acid and propionic acid. Acids, alcohols such as ethanol and propanol and the like can be used.
- Nitrogen sources include ammonia, ammonium chloride, ammonium sulfate, ammonium acetate, ammonium phosphate, and other ammonium or inorganic salts of organic acids, other nitrogen-containing compounds, and peptone, meat extract, yeast extract, and corn starch. 1. Casein hydrolyzate, soybean meal and soybean meal hydrolyzate, various fermented cells, digested products thereof, and the like can be used.
- potassium phosphate monobasic, potassium phosphate dibasic, magnesium phosphate, magnesium sulfate, sodium chloride, ferrous sulfate, manganese sulfate, copper sulfate, calcium carbonate and the like can be used.
- the cultivation is usually carried out under aerobic conditions such as shaking culture or deep aeration stirring culture.
- the culturing temperature is preferably 15 to 40 ° C, and the culturing time is usually 16 to 96 hours.
- the pH is maintained at 3.0 to 9.0.
- the pH is adjusted using an inorganic or organic acid, an alkaline solution, urea, calcium carbonate, ammonia, or the like.
- an antibiotic such as ampicillin or tetracycline may be added to the medium during the culture.
- an indicator When culturing a microorganism transformed in an expression vector using an inducible promoter as the promoter, an indicator may be added to the medium, if necessary.
- an indicator For example, when culturing a microorganism transformed with an expression vector using a promoter, isopropyl-1 /?-D-thiogalactopyranoside or the like is used; —When culturing a microorganism transformed with an expression vector using Yuzuichi, indoleacrylic acid or the like may be added to the medium.
- a medium for culturing the transformant obtained using animal cells as a host commonly used RPMI1640 medium [The Journal of the American Medical Association, 199, 519 (1967)], Eagle's MEM medium [Science, 122, 501 (1952)), DMEM medium (Virology, ⁇ , 396 (1959)), 199 medium (Proceeding of the Society for the Biological Medicine, 73, 1 (1950)), or fetal calf serum etc.
- a used medium or the like can be used.
- Culture is usually p H 6 ⁇ 8, 3 0 - performing 4 0 ° C 5% C 0 2 under the conditions such as the presence 1-7 days.
- an antibiotic such as kanamycin, penicillin, streptomycin or the like may be added to the medium during the culture.
- TNM-II medium Pharmingen
- Sf-900 II SFM medium Sf-900 II SFM medium
- ExCell400 ExCell405 (all manufactured by JRH Biosciences)
- Grace's Insect Medium Neture, 195, 788 (1962)
- the cultivation is usually performed under conditions of pH 6 to 7, 25 to 30 ° C. for 1 to 5 days.
- an antibiotic such as genyumycin may be added to the medium during the culture.
- an ordinary enzyme isolation and purification method may be used.
- the polypeptide of the present invention when expressed in a dissolved state in a cell, after completion of the culture, the cell is collected by centrifugation, suspended in an aqueous buffer, and then subjected to an ultrasonic homogenizer, a French press, The cells are disrupted with a Manton Gaurin homogenizer, Dynomill, etc. to obtain a cell-free extract.
- an ordinary enzyme isolation and purification method that is, a solvent extraction method, a salting out method using ammonium sulfate, a desalting method, and a precipitation method using an organic solvent , Getylaminoethyl (DEAE)-Sepharose, anion exchange chromatography using a resin such as DIAION HPA-75 (manufactured by Mitsubishi Chemical Corporation), and a positive electrode using a resin such as S-Sepharose FF (manufactured by Pharmacia) Ion exchange chromatography, hydrophobic chromatography using resins such as butyl sepharose and phenylsepharose, gel filtration using molecular sieves, affinity chromatography, chromatofocusing, etc.
- a purified sample can be obtained by using techniques such as electrophoresis such as electrofocusing alone or in combination.
- the cells When the polypeptide is expressed by forming an insoluble substance in the cells, the cells are similarly recovered, crushed, and centrifuged. After recovering the polypeptide, the insoluble form of the polypeptide is solubilized with a protein denaturant.
- the solubilized solution was diluted or dialyzed into a solution containing no protein denaturing agent or a solution in which the concentration of the protein denaturing agent was so low that the protein was not denatured, to form the polypeptide into a normal three-dimensional structure. Thereafter, a purified sample can be obtained by the same isolation and purification method as described above.
- the polypeptide of the present invention or a derivative such as a modified sugar chain thereof is secreted extracellularly, the polypeptide or the derivative such as a glycosylated product thereof can be recovered in the culture supernatant.
- a soluble fraction is obtained by treating the culture by a method such as centrifugation as described above, and a purified sample is obtained from the soluble fraction by using the same isolation and purification method as described above. Can be obtained.
- the polypeptide of the present invention can be produced as a fusion protein with another protein, and purified using affinity chromatography using a substance having affinity for the fused protein.
- affinity chromatography using a substance having affinity for the fused protein.
- the polypeptide of the present invention can be produced as a fusion protein with protein A according to the method described in 05-336963, W094 / 23021, and can be purified by affinity chromatography using immunoglobulin G.
- polypeptide of the present invention can be produced as a fusion protein with an F1ag peptide and purified by affinity chromatography using an anti-F1ag antibody [Proc. Natl. Acad. Sci. USA, 86, 8227 (1989), Genes & Dev., A, 1288 (1990)]. Furthermore, it can be purified by affinity chromatography using an antibody against the polypeptide.
- polypeptide of the present invention can also be produced by chemical synthesis methods such as the Fmoc method (fluorenylmethyloxycarbonyl method) and the tB0c method (t-butyloxycarbonyl method). be able to.
- Structural analysis of the purified polypeptide of the present invention is described in a method commonly used in protein chemistry, for example, protein structural analysis for gene cloning (Hisashi Hirano, published by Tokyo Kagaku Dojin, 1993). The method can be implemented by the following method. ,
- a polyclonal antibody can be produced by using the purified full-length or partial fragment of the polypeptide of the present invention obtained by the method described in the above [2] as an antigen and administering it to an animal.
- the dose of the antigen is preferably 50 to 100 zg per animal.
- a peptide it is preferable to use, as an antigen, a peptide obtained by covalently bonding the peptide to a carrier protein such as keyhole limpet haemocyanin or bovine tilogin purine.
- a peptide serving as an antigen can be synthesized by a peptide synthesizer.
- the administration of the antigen is performed 3 to 10 times every 1 to 2 weeks after the first administration.
- Blood is collected from the fundus venous plexus 3 to 7 days after each administration, and the reaction of the serum with the antigen used for immunization is determined by enzyme-linked immunosorbent assay [Enzyme-linked immunosorbent assay (ELISA): published by Medical Shoin 1976 Antibodies-A Laboratory Manual, Cold Spring Harbor Laboratory Press (1988)
- a polyclonal antibody can be obtained by obtaining serum from a non-human mammal whose serum shows a sufficient antibody titer against the antigen used for immunization, and separating and purifying the serum.
- Separation and purification methods include centrifugation, salting out with 40-50% saturated ammonium sulfate, force prillic acid precipitation (Antibodies, A Laboratory Manual, Cold Spring Harbor Laboratory, (1988)), or DEAE-Cephalone.
- a rat whose serum shows a sufficient antibody titer against the antigen used for immunization is used as a source of antibody-producing cells.
- the spleen is removed 3 to 7 days after the final administration of the antigenic substance to the rat showing the antibody titer.
- the spleen is shredded in MEM medium (manufactured by Nissui Pharmaceutical), loosened with forceps, centrifuged at 1,200 rpm for 5 minutes, and the supernatant is discarded.
- MEM medium manufactured by Nissui Pharmaceutical
- the resulting precipitate fraction spleen cells were treated with Tris ammonium chloride buffer (pH 7.6.5) for 1 to 2 minutes to remove red blood cells, and then washed three times with MEM medium. Splenocytes are used as antibody producing cells.
- myeloma cells cell lines obtained from mice or rats are used.
- 8-azaguanine resistant mouse derived from BALB / c myeloma cell line
- P3-X63Ag8-Ul CCurr.Topics Microbiol. Immunol., 81, 1 (1978), Eur.J.I maraudal nol., 6, 511 (1976)], SP2 / 0-Agl4 (SP- 2) (Nature, 276, 269 (1978)), P3-X63-Ag8653 (653) [J. Immunol., 123, 1548 (1979)] ⁇ P3-X63-Ag8 (X63) [Nature, 495 (1975) ] and the like can be used.
- these cell lines include 8-Azaguanin medium [RPMI-1640 medium glutamine (1.
- the resulting precipitated fraction of cell groups may Hoku, and, in the group of cells, with stirring, at 37 ° C, 10 8 antibody-producing cells per polyethylene glycol one Roux 1000 (PEG- 1000) 2 g MEM Add 0.2 to 1 mL of a mixed solution of 2 mL and 0.7 mL of dimethyl sulfoxide (DMS 0), and add 1 to 2 mL of MEM medium several times every 1 to 2 minutes.
- PEG- 1000 polyethylene glycol one Roux 1000
- DMS 0 dimethyl sulfoxide
- the suspension was dispensed by 100 ⁇ L / well to the plate for a 96-well culture, 5% Rei_0 2 in I Nkyube Isseki one, at 37 ° C? Incubate for ⁇ 14 days.
- a purified full-length or partial fragment of the polypeptide of the present invention used as an antigen is coated on an appropriate plate, and the obtained supernatant is obtained from a hybridoma culture supernatant or (2-4) described later.
- the purified antibody is reacted as the first antibody, and the second antibody is reacted with an anti-rat immunoglobulin antibody labeled with biotin, an enzyme, a chemiluminescent substance, a radiation compound, or the like, followed by a reaction according to the labeling substance.
- Those which specifically react with the polypeptide of the present invention are selected as hybridomas producing monoclonal antibodies against the polypeptide of the present invention.
- Pristane-treated [2,6,10,14-tetramethyl-pen-decane (Pristane) -0.5 mL was intraperitoneally administered and bred for 2 weeks] to 8-10 week old mice or nude mice, (2 -Intraperitoneal injection of 5 to 20 x 10 6 hybridoma cells producing a monoclonal antibody against the polypeptide of the present invention obtained in 3) I do.
- Hypridoma develops ascites cancer in 10 to 21 days.
- the ascites is collected from the mouse with ascites tumor and centrifuged at 3,000 rpm for 5 minutes to remove solids. 'From the obtained supernatant, a monoclonal antibody can be purified and obtained by the same method as that used for the polyclonal antibody.
- the antibody subclass is determined using a mouse monoclonal antibody evening kit or a rat monoclonal antibody typing kit.
- the protein amount is calculated by the oral method or the absorbance at 28 Onm.
- the polypeptide of the present invention is expressed in Escherichia coli, yeast, insect cells, animal cells, etc. as a host, or prepared in DNA or in vitro in African omega frog oocytes.
- Expression of the cRNA obtained by the microinjection method (Methods in Enzymology, Z07, 225 (1992), Methods in Enzymology, 254, 458 (1995)), and in v: itro translation products were measured for PDE activity.
- PDE activity is measured using a cyclic nucleotide (eg, [ 3 H] cAMP or [ 3 H] cGMP) labeled with a detectable reagent (eg, a radioactive, fluorescent, or colorimetric reagent).
- a detectable reagent eg, a radioactive, fluorescent, or colorimetric reagent.
- the polypeptide of the present invention is expressed in a yeast (e.g., Saccharomyces cerevisiae strain PP5 (ATCC number 96135), Saccharomyces cerevisiae strain 10DAB (ATCC number 74049)), and recovery of heat shock sensitivity, sensitivity to nitrogen deficiency, etc. is used as an index. ; PDE activity can also be detected [Proc. Natl. Acad. Sci. USA, 90 5 11970 (1993), J. Biol. Chem., 274, 4839 (1999)].
- Test samples include synthetic compounds, naturally occurring proteins, artificially synthesized proteins, peptides, carbohydrates, lipids, modified forms and derivatives thereof, and mammals (for example, mice, rats, guinea pigs, hamsters).
- the agonist or aminogonist of the polypeptide of the present invention obtained by the above method can be used alone as a therapeutic agent, but is usually one or more pharmacologically acceptable. It is desirable to mix it with a carrier and use it as a pharmaceutical preparation produced by any method well known in the pharmaceutical art.
- oral administration or parenteral administration such as oral, respiratory, rectal, subcutaneous, intramuscular, and intravenous administration.
- parenteral administration such as oral, respiratory, rectal, subcutaneous, intramuscular, and intravenous administration.
- Examples of the dosage form of the therapeutic agent include ointments, sprays, capsules, tablets, granules, syrups, emulsions, suppositories, injections, tapes and the like.
- Formulations suitable for oral administration include emulsions, syrups, capsules, tablets, powders, granules and the like.
- Liquid preparations such as emulsions and syrups are prepared from sugars such as water, sucrose, sorbitol, fructose, glycols such as polyethylene glycol, propylene glycol, sesame oil, olive oil, soybean oil, etc. It can be produced using preservatives such as oils, p-hydroxybenzoic acid esters, etc., and flavors such as bery flavor, peppermint and the like as additives.
- Capsules, tablets, powders, granules, etc. are excipients such as lactose, glucose, sucrose, mannitol, disintegrants such as starch and sodium alginate, lubricants such as magnesium stearate, talc, polyvinyl chloride Binders such as alcohol, hydroxypropyl cellulose and gelatin, surfactants such as fatty acid esters, and plasticizers such as glycerin can be used as additives.
- Formulations suitable for parenteral administration include injections, suppositories, sprays and the like.
- An injection can be prepared using, for example, a carrier composed of a salt solution, a glucose solution, or a mixture of both.
- Suppositories can be prepared using carriers such as cocoa butter, hydrogenated fats and carboxylic acids.
- the agonist or angonist obtained above can be used directly as a propellant, but it does not irritate the oral cavity and the respiratory tract mucosa of the recipient, and the conjugate is used as fine particles. Sprays prepared using a carrier or the like that disperses and facilitates absorption are preferred.
- the carrier include lactose and glycerin.
- Formulations such as aerosols and dry powders can be prepared depending on the properties of the agonist or angelic gonist obtained above and the carrier.
- the dose or frequency of administration varies depending on the desired therapeutic effect, administration method, treatment period, age, body weight, etc., but is usually 10 zg / kg to 8 mg / kg per adult per day.
- the compound for regulating the expression of the polypeptide of the present invention can be searched and identified by using the antibody of the present invention.
- any cell, cell line, or tissue expressing the polypeptide of the present invention can be used.
- a cell, cell line, or tissue in which the expression of the polypeptide has been observed can be used by the method of immunologically detecting with the antibody described in [7] or the method of detecting m: RNA.
- Suitable cell lines include, for example, Hep (3 ⁇ 4 cells).
- test sample those described in the test sample in the above [5] can be used.
- the cells expressing the polypeptide of the present invention are suspended in a medium capable of growing the cells, a test sample is added to the medium, and the cells are contacted with the cells.
- Quantify the expressed polypeptide content of the cells As a method for quantification, for example, a method using the following immune cell staining can be mentioned.
- Cultured cells can be used as they are for suspension cells.
- the cells are washed with a PBS buffer and suspended in a fixative.
- the fixative include a PBS buffer containing 3.7% formaldehyde.
- An example of the reaction solution that is permeable to the moon is a PBS buffer solution containing 0.1% Triton X-100.
- the treated cells are suspended in a buffer for staining of immune cells (PBS containing 1% BSA, 0.02% EDTA, 0.05% sodium azide), etc., and 1 to 20 ⁇ 10 5 cells are suspended. Dispense into a round bottom 96-well plate.
- the monoclonal antibody of the present invention is dispensed on the plate.
- Examples of the monoclonal antibody include the culture supernatant of a hybridoma producing the monoclonal antibody of the present invention obtained in [3] (2-3), and the purified monoclonal obtained in [3] (2-4). Antibodies can be mentioned. Furthermore, an antibody labeled with the monoclonal antibody can also be used.
- an antibody labeled with a monoclonal antibody for example, a biotin-labeled antibody can be mentioned.
- a biotin-labeled antibody can be prepared by a known method (enzyme antibody method: interdisciplinary project, 1985).
- the above antibody is diluted to a concentration of 0.1 to 50 ⁇ g / mL using an immune cell staining buffer or an immune cell staining buffer containing 10% animal serum.
- a buffer for immunocell staining is added to the plate, and the cells are washed.
- FITC fluorescein isothiocyanate
- strebutavidin labeled with a fluorescent dye such as FITC or phycoerythrin is dispensed into the above plate in an amount of 5-0 to 500 ⁇ L / well, and the plate is iced. Leave in the light for 30 minutes under cooling.
- Expression-modulating compounds can be identified by searching for a test sample that increases or decreases the polypeptide content of the present invention as compared to a system to which no test sample is added.
- the cell expressing the polypeptide or the mRNA of the present invention for example, the cell line described in the above [6] (1) can be used, and as the test sample, the one described in the above [5] can be used.
- Cells expressing the polypeptide of the present invention or mRNA encoding the polypeptide are suspended in a medium capable of growing the cells, a test sample is added to the medium, and the cells are contacted. After that, the content of the mRNA expressed in the cells is quantified by a conventional Northern hybridization method, an RNA dot-protocol hybridization method, and an RT-PCR method. I do.
- a gene fragment encoding the polypeptide of the present invention can be mentioned as a probe that can be used for the hybridization method or the like and a primer that can be used for the HT-PCR method or the like.
- an oligonucleotide having the same sequence as the contiguous 5 to 6 bases in the nucleotide sequence of SEQ ID NO: 2 or SEQ ID NO: 16 an oligonucleotide having a sequence complementary to the oligonucleotide, It can be suitably used.
- An expression-regulating compound can be identified by searching for a test sample that increases or decreases the mRNA content of the polypeptide of the present invention as compared to a system to which no test sample is added.
- Plasmid containing DNA linked to a repo-all-one gene downstream of a region that regulates transcription of a gene encoding the polypeptide of the present invention (hereinafter, abbreviated as a transcription control region). After contacting the transformant transformed with the test sample with the test sample, the expression controlling compound can be searched and identified by quantifying the expression level of the polypeptide encoded by the reporter gene.
- a transcription control region is usually contained 5 ′ upstream of a gene.
- the 5, upstream region of the gene encoding the polypeptide of the present invention can be prepared using, for example, Genome Walker kits (Clontech).
- a fragment obtained by cutting this region using an appropriate restriction enzyme to an appropriate length can be used as a transcription control region.
- the reporter gene any gene can be used as long as the translation product of the gene is stable in cells and the amount of the translation product can be easily quantified.
- Examples of peptides include chloramphenic acid luciferase transferase (CAT), 5-galactosidase (5-gal), luciferase (luc), glucuronidase, equorin, green fluorescent protein (GFP) ) Etc. can be given.
- Any cell may be used as a host cell into which the repo overnight plasmid containing the transcription control region is introduced, but preferably, the polypeptide of the present invention described in [6] (1) is used.
- a cell line in which expression of the polypeptide mRNA has been confirmed can be used.
- test sample described in [5] above can be used.
- the repo overnight gene is ligated to the downstream of the transcription control region by an ordinary method, and the resulting plasmid is used to transform host cells by an ordinary method. .
- gene selection for positive selection such as G418 resistance gene
- negative selection marker for simple herpesvirus thymidine kinase diphtheria toxin A fragment gene, etc.
- Vector and a cell line in which a part of the chromosomal gene encoding the polypeptide of the present invention is replaced with a repo overnight gene
- the transformant is suspended, for example, in a medium in which the cells can grow, a test sample is added to the medium, and the cells are brought into contact with each other.
- the amount of the encoded polypeptide is detected and determined by a method appropriate for the polypeptide.
- Expression-controlling compounds can be identified by searching for a test sample that increases or decreases the content of the polypeptide encoded by the repo overnight gene as compared to a system in which the test sample is not added.
- the DNA of the present invention is obtained by using the DNA as a probe for RNA extracted from tissues and cells of non-human mammals such as humans and mice in the same manner as in [1] (1).
- the mRNA of the polypeptide gene of the present invention in the tissue or cell can be detected or quantified.
- tissue expression distribution of the polypeptide of the present invention can be known.
- the oligonucleotide of the present invention was used as a specific primer of the DNA of the present invention and extracted from tissues and cells of non-human mammals such as humans and mice in the same manner as [1] (1).
- RT-PCR reverse transcription PCR; PCE Pr-otocols (1990)
- mRNA encoding the polypeptide of the present invention can be detected and quantified.
- the method for quantifying the mRNA can be used for diagnosis of a disease state associated with the present gene. it can.
- a drug can be evaluated by comparing the expression amount of the mRNA with or without the drug.
- the information obtained by these methods on the tissue and cells in which the polypeptide of the present invention is expressed and the information on what kind of stimulus the cells receive when the expression level changes are as follows. It is useful for analyzing the involvement of the polypeptide of the present invention in physiological functions and disease states.
- the mutation of the gene encoding the polypeptide of the present invention is carried out by performing Southern hybridization (second edition) on genomic DNA using the DNA as a probe. Can be detected.
- Detection of the mutation may cause the mutation in the gene, for example, diabetes, ischemic heart disease, hypertension, nephritis, knee inflammation, ulcer, allergy, asthma, rheumatism, osteoporosis, Diagnosis of diseases such as pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia or malignancy can be made.
- a single nucleotide polymorphism (single nucleotide polymorphism) can be obtained by amplifying the gene encoding the polypeptide of the present invention using PCR or the like and analyzing the base sequence, or by performing analysis using a DNA chip or the like.
- polymorphisms SNP
- the polymorphism of the gene may be related, for example, diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis , Pain, anxiety, schizophrenia, manic depression, par
- RNA antisense 'oligonucleotide (RNA, DNA or a derivative thereof) of the present invention to suppress the transcription of the gene encoding the polypeptide of the present invention or the translation of mRNA, 46, 681 (1991), Bio / Technology, 9, 358 (1992)]
- RNA antisense 'oligonucleotide
- such genes may be involved in the pathogenesis, such as diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, It can be used for the prevention and treatment of diseases such as allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease and malignant tumor.
- diseases such as allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease and malignant tumor.
- the above-mentioned antisense 'oligonucleotide is preferably an oligonucleotide having a sequence complementary to 5 to 60 consecutive nucleotides in the nucleotide sequence of the DNA encoding the polypeptide of the present invention, preferably the polynucleotide of the present invention. It is designed and prepared based on the nucleotide sequence complementary to 5 to 60 bases in the translation initiation region of the DNA encoding the peptide, and is then administered to a living body.
- the medicament containing the DNA of the present invention can be prepared by the same method as the above-mentioned [5], which is the same as the method for preparing a pharmaceutical preparation of an agonist or an agonist of the polypeptide of the present invention.
- the prepared pharmaceutical preparation can be administered in the same manner as in the above [5].
- polypeptide of the present invention can be obtained by the method described in [2] using the DNA of the present invention.
- polypeptides of the present invention include diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, E depression, Parkinson's disease, Remedies or prophylactics for diseases such as dementia, infectious diseases or malignancies are contemplated.
- the medicament containing the polypeptide of the present invention can be prepared and prepared by using the same method as the above-mentioned [5] for preparing the pharmaceutical preparation of the agonist or gonist of the polypeptide of the present invention.
- the pharmaceutical preparation can be administered in the same manner as in the above [5].
- the oligonucleotide of the present invention is a single-stranded or double-stranded retrovirus, It can be incorporated into viral vectors such as adenovirus and adeno-associated virus, and other vectors, and used as gene therapy vectors for gene therapy.
- An antibody against the polypeptide of the present invention can be produced by the method described in [3] using the polypeptide of the present invention as an antigen.
- the polypeptide of the present invention can be detected or quantified immunologically.
- Specific examples include the ELISA method using a microtiter plate, immunohistochemical staining using an enzyme-labeled antibody method or a fluorescent antibody method, and a detection method using a western blot method.
- sandwich ELISA using two types of monoclonal antibodies that recognize different polypeptides among antibodies that react with the polypeptide of the present invention in the liquid phase, labeling with radioisotopes such as ⁇ ⁇ And a radioimmunoassay method using the polypeptide of the present invention and an antibody that recognizes the polypeptide of the present invention.
- the antibody of the present invention can also be used for immunological and tissue staining using pathological tissue sections. Using the antibody of the present invention, the polypeptide of the present invention present in cells or tissues of healthy subjects and subjects is immunologically detected or quantified, and the amount is compared between healthy subjects and subjects.
- the subject's diabetes By examining whether it has changed, the subject's diabetes, ischemic heart disease, hypertension, nephritis, Tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, It can be used for diagnosis of pathological conditions such as Parkinson's disease, dementia, infectious disease and malignant tumor.
- the antibody of the present invention to immunologically detect or quantify the polypeptide present in tissues and cells of various pathological model animals, and comparing with a normal animal, the polypeptide in the pathological state can be obtained. The importance of peptides can be clarified. Furthermore, a drug can be evaluated by comparing the expression level of the polypeptide depending on the presence or absence of the drug.
- the medicament containing the antibody of the present invention can be prepared using the same method as the above-mentioned [5], which is the same as the method for preparing a pharmaceutical preparation of the polypeptide of the present invention or an agonist of the present invention.
- the pharmaceutical preparation can be administered in the same manner as in the above [5].
- the compounds that regulate the expression of the agonist, angiogonist of the present invention and the polypeptide gene of the present invention include diabetes, ischemic heart disease, hypertension, nephritis, nephritis, ulcer, allergy, asthma, rheumatism. It is expected to be used for the treatment or prevention of diseases such as osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease and malignancy.
- Patent application for application filed on March 7, 2000 which forms the basis of the priority claimed in the present application 200 0 — 6 1 4 6 4 and Japanese application for patent application, filed on July 10, 2000 2 All the contents described in 0 0 0—2 0 8 6 10 shall be cited as disclosure in this specification.
- Example 1 Cloning of a human cDNA fragment encoding a protein having PDE activity (1) Preparation of a cDNA library derived from HepG2 cells
- Plasmid DNA was obtained from each Escherichia coli clone of the cDNA library prepared in (1) above according to a conventional method, and the nucleotide sequence of the terminal of cDNA contained in each plasmid was determined.
- the nucleotide sequence was determined using a kit (BigDye Terminator Cycle Sequencing FS Ready Reaction Kit, manufactured by PE Biosystems) and a DNA sequencer (ABI PRISM 377, manufactured by PE Biosystems).
- the primer the synthetic DNA shown in SEQ ID NOs: 7 and 8 was used.
- plasmid hepl0314 contained a cDNA of about 2.Ikb from base number 406 of the nucleotide sequence described in SEQ ID NO: 2, and was described in SEQ ID NO: 1. 339 a in new polypeptides
- a DNA polymerase described in SEQ ID NO: 9 and SEQ ID NO: 10 was designed, and the following method was used using the Human Pancreas Marathon-Ready cDNA kit (manufactured by Klontech) by the method shown below.
- the PCB was amplified.
- TaKaRa PCR Thermal Cycler 480 heat at 95 ° C for 10 minutes, perform 30 cycles at 94 ° C for 30 seconds and 60 ° C for 2 minutes as one cycle, and further heat at 72 ° C for 8 minutes did.
- primers of SEQ ID NO: 10 and AP2 were each 0.2 mol / L, and each component was 200 mol / L dNTP ( dATP s dGTP, dCTP, dTTP) mixed solution, Taq Gold polymerase (manufactured by Pakin Elmer) 2.5 units, and 1 1 & 9 01 (reaction solution 5 () ⁇ containing 1 buffer solution) PCR was carried out in the same manner.
- the obtained PCR reaction solution was fractionated, and after confirming that an approximately 0.7 kb MA fragment was amplified by agarose gel electrophoresis, the DNA fragment was separated using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual. Purified.
- Example 2 Shown in 5 5 end side MA primer first and SEQ ID NO: 1 0 shown in the Northern High Priestess die peptidase one Chillon sequence based on the information of nucleotide sequence determined by expression analysis Example 1 of mRNA by No. 1 1: Example 2 A 3 'end DNA primer was designed and synthesized. 0.2 mol / L of each of the two types of obtained primers, plasmid of Example 1
- each component 200 ⁇ mol / L dNTP (dATP, dGTP, dCTP, dTTP) mixture
- PCR was performed under the following conditions using a reaction solution (50 / L) containing 2.5 units of ExTaq polymerase (Takara Shuzo) and IXExTaq buffer.
- BAP (Hereinafter abbreviated as BAP).
- C75 (Takara Shuzo Co., Ltd.) was added, and a dephosphorylation reaction was performed at 60 ° C for 30 minutes.
- the reaction solution was subjected to agarose electrophoresis, and pBluescript II KS (-)-derived! was used using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
- the RV-BAP treated fragment (3.0 kb) was purified.
- a buffer solution consisting of 50 ⁇ l / L Tris-HCl (pH 7.5), 10 orchid ol / L magnesium chloride, 1 orchid ol / L DTT, and 100 hol / L sodium chloride 50 ⁇ l of plasmid p200 ⁇ L, dissolved in 10 units of! ⁇ RI (Takara Shuzo) and (Takara Shuzo), and digested at 37 ° C for 3 hours. After phenol extraction and ethanol precipitation, the DNA fragment was subjected to a binding reaction using a DNA Blunting Kit (Takara Shuzo) according to the manual.
- Escherichia coli JM109 strain was transformed using the recombinant plasmid DNA obtained by the reaction, and a plasmid p200-EB for preparing a Northern analysis probe was prepared by an ordinary method.
- Figure 3 shows the construction process and restriction map of the plasmid.
- a buffer solution consisting of 10 ⁇ g of the prepared plasmid p200-EB at 10 ⁇ l / L Tris-hydrochloric acid (pH 7.5), 10 mmol / L magnesium chloride, 50 orchids ol / L sodium chloride, and 1 ol / L DTT 50
- the mixture was dissolved in L, 30 units of IIIi (Takara Shuzo) was added, and the digestion reaction was performed at 37 ° C for 6 hours. Using the reaction mixture, phenol-mouth opening extraction and ethanol precipitation were performed to recover DNA fragments. ''
- Lg of the DNA fragment was converted into 40 orchid ol / L Tris-hydrochloride (pHS.O), 6 ol / L magnesium chloride, 2 ol / L spermidine, 10 mfflol / L DTT ⁇ 1 ol / L ATP, lmmol / L CTP.
- 1 ol / L GTPs 0.65 ⁇ ol / L UTP, 0.35 ol / L digoxigenin-; - ⁇ -dissolved in 50 zL of buffer, 40 units of T7 RNA polymerase (Peringa-Mannheim ) And in vitro transcription reaction was performed at 37 ° C for 2 hours.
- the hybrid was subjected to 50% formamide, 5 times concentration of SSC (1 times concentration of SSC was 150 ol / L sodium chloride and 15 ol / L sodium citrate), 0.5% sodium dodecyl sulfate (hereinafter abbreviated as SDS), 2% blocking reagent (manufactured by Behringer Mannheim), O.lmg / mL salmon sperm DNA was immersed in a buffer solution (hereinafter abbreviated as hybridization buffer), and prehybridization was performed at 70 ° C
- the film was immersed in a hybridization buffer in which the above-mentioned digoxigenin-labeled cMA probe was dissolved at a concentration of 1 g / mL, and hybridization was performed at 70 ° C. for 15 hours.
- the film is immersed once in a buffer consisting of 2 times concentration SSC and 0.1% SDS at 70 ° C for 10 minutes, and then 70 ° C in a buffer consisting of 0.2 times concentration SSC and 0.1% SDS once. C, washed three times under conditions of immersion for 30 minutes.
- the film is immersed for 15 minutes at room temperature in a buffer solution (hereinafter abbreviated as DIG I buffer solution) consisting of 100 t ol / L maleic acid (pH 7.5) and 150 ol / L sodium chloride. Washing was performed twice under the conditions to remove SDS.
- DIG I buffer solution consisting of 100 t ol / L maleic acid (pH 7.5) and 150 ol / L sodium chloride.
- the filter was immersed in a buffer solution consisting of 100 mmol / L maleic acid (pH 7.5), 150 t ol / L sodium chloride, and 1% blocking reagent (hereinafter abbreviated as DIGI I buffer solution), and left at room temperature for 1 hour. Proking was performed.
- the filter was immersed in a solution of anti-digoxigenin antibody Fab fragment (manufactured by Boehringer-Mannheim) diluted 10,000 times with DIGII buffer, and the antigen-antibody reaction was performed at room temperature for 30 minutes. went.
- the filter was washed three times with DIG I buffer at room temperature for 30 minutes to remove excess antibody, and then 100 mmol / L Tris-HCl (pH 9.0), 100 mL / L chloride were added. It was immersed in a buffer solution containing sodium and 50 t ol / L magnesium chloride (hereinafter abbreviated as DIGIII buffer solution) for 5 minutes to equilibrate.
- DIGIII buffer solution a buffer solution containing sodium and 50 t ol / L magnesium chloride
- Fig. 4 shows the results. Approximately 2. s was found in the kidney
- Example 1 E. coli expressing a glutathione S transferase (hereinafter abbreviated as GST) fusion protein was used. Produced.
- GST glutathione S transferase
- DNA-end DNA primer shown in SEQ ID NO: 13 were designed and synthesized.
- the obtained PCR reaction solution was fractionated, and it was confirmed by agarose electrophoresis that a DNA fragment of about l.Okb was amplified.
- 10 t ol / L magnesium chloride 1 hi ol / L DTT
- 100 t ol / L chloride After dissolving in 50 ⁇ L of a buffer solution containing lithium, 10 units of iHI (manufactured by Takara Shuzo) were added, and digestion reaction was performed at 37 ° C. for 3 hours.
- the DNA fragment was reconstituted with 10 l / l Tris-HCl (pH 7.5), 10 l / l magnesium chloride, limol / L DTT, 50 l / l sodium chloride, 0.01 l / l Dissolve in 50 ⁇ L of buffer solution consisting of 10% serum albumin, add 10 units of 1 (Takara Shuzo) and incubate the digestion reaction at 37 ° C for 3 hours. went.
- the reaction solution was subjected to agarose electrophoresis, and the I-I fragment (1. Okb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN). '
- digestion reaction was performed at 37 ° C for 3 hours.
- the reaction solution was subjected to agarose electrophoresis, and an HI-I fragment (9.6 kb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
- plasmid pPDE-1393 was obtained by a conventional method. 2 ⁇ g of the plasmid pPDE-1393 was added to 50 t ol / L Tris-hydrochloride (pH 7.5), 10 t ol / L magnesium chloride, 1 t ol / L DTT, 100 t ol / L sodium chloride, 0.01% The solution was dissolved in a buffer solution consisting of serum albumin and O.
- Plasmid pT-1 obtained in Example 1 was prepared from 50 ol / L Tris-monohydrochloride (pH 7.5), 10 t ol / L magnesium chloride, 1 t ol / L DTT, and 100 t ol / L sodium chloride.
- the resulting solution was dissolved in 50 L of a buffer solution, and 10 units of l £ V and £ 1 were added thereto, and the digestion reaction was carried out at 37 ° C for 3 hours.
- the reaction solution was subjected to agarose electrophoresis, and V- £ i ⁇ I (0.3 kb) was purified using QIAEX II Gel Extraction K (manufactured by QIAGEN).
- plasmid pGEX-5X-1 (Pharmacia) was added to 33 ⁇ l / L Tris-HCl (pH 7.9), dissolved in 50 L of a buffer consisting of 10 ol / L magnesium acetate, 0.5 L ol / L DTT, and 66 L ol / L potassium acetate, added 10 units of l, and added at 30 ° C. A time digestion reaction was performed.
- the DNA fragment was used in 50 ol / L tris monohydrochloride (pH 7.5), 10 ol / L magnesium chloride, 1 ol / L DTT ⁇ 100 ol / L sodium chloride was dissolved in 50 ⁇ L of a buffer solution containing 0.01% Pseudoserum albumin and 0.01% Tron X-100, and 10 units of l was added to carry out a digestion reaction at 37 ° C. for 3 hours. The reaction solution was subjected to agarose electrophoresis, and an I-MI fragment (5. Okb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
- a 50 ng (5.0 kb) binding reaction was carried out using DNA Ligation Kit Ver.2 (Takara Shuzo) according to the manual.
- the recombinant plasmid DNA obtained by the reaction was used to transform E. coli JM109 strain, and Escherichia coli JM109 / pGST-PDE strain containing plasmid pGST-PDE was obtained by a conventional method.
- Figure 5 shows the construction process and restriction map of the plasmid.
- the cells were recovered by centrifugation (3,000 rpm for 10 minutes), and the extract (20 orchids ol / L Tris-acetic acid (pH7.5), 2 ol / L magnesium chloride, 1 ol / L DTT, 250 units) / mL aprotinin, 40 ⁇ g / mL phenylmethylsulfonyl fluoride, and l / g / mL peptide A), and disrupt Escherichia coli using an ultrasonic crusher (T0MY model UR-200R). did.
- the extract was centrifuged at 10,000 rpm for 30 minutes, and the supernatant was used for PDE activity measurement.
- PDE activity was determined by the method of Kincaid, RL and Manganiello, VC Ofethod. Enzymol., 159, 457-470 (1988)).
- [3 ⁇ 4] -cAMP or [3 ⁇ 4] -cGMP as a substrate 300 L reaction solution [50 ol / L of ⁇ , ⁇ ⁇ -bis (2-hydroxyethyl) -2_aminoethanesulfonate ( ⁇ 7. 2), 1 mol / L magnesium chloride, 0.1 lotol / L ethylene glycol bis (?-Aminoethyl ether) -NJ, N, J, -disodium tetraacetate].
- the substrate concentration was; mol / L.
- [3 ⁇ 4] -cAMP and [3 ⁇ 4] -cGMP degradation amount The amount of degradation by the Escherichia coli soluble fraction was determined by subtracting the amount of non-catalytic hydrolysis from the total amount of degradation. The protein amount was quantified using the Bio Rad Protein Assay method. As a control, an E. coli soluble fraction into which only plasmid pGEX-5X-1 was introduced was used. Fig. 6 shows the results. -As described above, it has been clarified that the polypeptide of the present invention has PDE activity for hydrolyzing cAMP and cGMP.
- Example 4 Cloning of a full-length human cDNA fragment encoding a protein having PDE activity
- the solution was dissolved in 50 / L, 40 units of I and gEl (Takara Shuzo) were added, and the digestion reaction was performed at 37 ° C for 4 hours.
- the reaction solution was subjected to agarose electrophoresis, and a DNA fragment of about 1 kb was recovered.
- the DNA fragment was purified using QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual.
- the purified DNA fragment is labeled with horseradish peroxidase using an ECL direct nucleic acid labeling / detection system (Amersham). And used as a probe.
- Plaque hybridization was performed using 2 ⁇ 10 5 clones of a cDNA library derived from human fetal kidney (manufactured by Clontech, trade name: Human Fetal Kidney 5′-STRETCH PLUS cDNA Library) using the probe. Two independent phage clones (vector: human gt10) hybridizing were obtained (clones 6-1 and 6-1).
- the operation of the hybrid is all performed by ECL direct nucleic acid labeling.
- the cDNA fragment contained in clone 23-1 of the phage clone was recombined from the phage vector to the plasmid vector.
- 20 ⁇ g of the DNA of the phageclone 23-1 was added to 50 ol / L tris-hydrochloride (pH 7.5), 10 orchids ol / L magnesium chloride, 100 thigh ol / L sodium chloride, 1 liter ol / L After dissolving in 30 zL of buffer solution containing LDTT, 15 units of!
- ⁇ RI (manufactured by Takara Shuzo Co., Ltd.) was added, and the digestion reaction was performed at 37 ° C for 4 hours.
- the reaction solution was subjected to agarose electrophoresis, and DNA fragments of about 2 kb and 1 kb were recovered.
- the DNA fragment was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual.
- the DNA fragment was dissolved in 30 zL of a buffer containing 50 t / ol / L Tris-monohydrochloride ( ⁇ 90) and 1 t / ol / L magnesium chloride, and 0.5 unit of BAP (E. coli C75) (Takara Shuzo) ) was added and a dephosphorylation reaction was performed at 60 ° C. for 30 minutes.
- the reaction solution was subjected to agarose electrophoresis, and a DNA fragment of about 3.0 kb was recovered.
- the MA fragment was purified using a QIAEX II Gel Extraction Kit (QIAGEN) according to the manual.
- Escherichia coli JM109 strain was transformed using the recombinant plasmid DNA obtained by the binding reaction, and plasmids p23-Ik and p23-2k were obtained by a conventional method.
- the inserted DNA fragments of plasmids p23-lk and p23-2k can be ligated at the ⁇ M site, and the approximately 3.0 kb cDNA described in SEQ ID NO: 16 And a novel polypeptide consisting of 576 amino acids described in SEQ ID NO: 15 was encoded in the cDM.
- the structures of p23-lk and p23-2k are shown in FIG.
- FIG. 8 shows an alignment between the amino acid sequence and the human PDE5A amino acid sequence (GenBank: CM06170).
- Two types of primers SEQ ID NO: 17 and SEQ ID NO: 18 each 1.0 ⁇ 1 / human tissue
- 2 ⁇ L cDNA library made from nRNA, 200 ⁇ mol / L dNTP dATP, dGTP, PCR was carried out under the following conditions using a reaction solution containing a mixture of dCTP and dTTP), 2.5 units of Taq Gold polymerase (manufactured by Pakinkin Elmer) and lxTaq Gold buffer (Mg plus).
- the DNA of the novel PDE polypeptide obtained according to the present invention it is possible to use the DNA of $ karauria, ischemic heart disease, hypertension, nephritis, rheumatism, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, Diagnosis, prevention, and treatment of diseases such as schizophrenia, manic depression, Parkinson's disease, dementia, infectious diseases, and malignant tumors are possible.
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Abstract
Description
明細書 Specification
ホスホジエステラーゼ活性を有するポリべプチド 技術分野 Polypeptides having phosphodiesterase activity
本発明は、 新規ホスホジエステラーゼポリぺプチド、 該ポリぺプチドをコ一ド する DNA、 該 DNAを含むベクター、 該べク夕一で形質転換された形質転換体 および該ホスホジエステラーゼポリべプチドの製造方法に関する。本発明はまた、 該ポリペプチドの利用方法、 例えば、 該ポリペプチドまたはその抗体を用いたァ ゴニスト又はアン夕ゴニスト活性を有する化合物のスクリーニング方法、 並びに 該ポリべプチド又はその抗体を含む医薬に関する。 背景技術 The present invention relates to a novel phosphodiesterase polypeptide, a DNA encoding the polypeptide, a vector containing the DNA, a transformant transformed with the vector, and a method for producing the phosphodiesterase polypeptide. . The present invention also relates to a method for using the polypeptide, for example, a method for screening for a compound having agonistic or angonist activity using the polypeptide or an antibody thereof, and a medicament containing the polypeptide or an antibody thereof. Background art
璟状ヌクレオチドは G蛋白質共役型受容体 (GPCR) からの刺激をはじめと する多くの細胞外刺激による細胞応答を仲介することが知られている。 環状ヌク レオチドホスホジエステラーゼ (PDE) は、 3, , 5, 一環状アデノシンモノ ホスフェート (c AMP)および 3, , 5, -環状グアノシンモノホスフェート ( cGMP) などの 3, , 5, 一環状ヌクレオチドを加水分解し、 対応するヌクレ オシド 5, モノホスフエ一トを生成することで細胞内のこれらの環状ヌクレオチ ドの濃度調節に重要な役割を果たしている CPharma Ther., 51, 13 (1991)〕 。 すなわち、 PDEは、 細胞内の定常状態での c AMPおよび cGMP濃度、 さら には環状ヌクレオチドを介したシグナルの大きさおよび持続時間を調節している ( 多くの実験結果より P D E活性は他のシグナル伝達系からの多種類の情報により 制御されていることが示されており、 シグナル伝達経路間の "cross- talk"およ び細胞内制御ネットワークの重要な位置を占めている 〔Trend. Pharmacol. Sci., 2i, 217 (1997)、 Physiol. Rev., 75, 725 (1995)、 Arch. Biochem. Biop ys.3322, 1 (1995)、 及び Endocrinol. Rev., 16, 370 (1995)〕 。 Linear nucleotides are known to mediate cellular responses to many extracellular stimuli, including stimuli from G protein-coupled receptors (GPCRs). Cyclic nucleotide phosphodiesterase (PDE) hydrolyzes 3,, 5, and monocyclic nucleotides such as 3,5,5 monocyclic adenosine monophosphate (cAMP) and 3,5,5-cyclic guanosine monophosphate (cGMP). In addition, they play an important role in regulating the concentration of these cyclic nucleotides in cells by producing the corresponding nucleoside 5, monophosphate. CPharma Ther., 51, 13 (1991)]. That, PDE is, c AMP and cGMP concentration, the further regulate the magnitude and duration of signals through cyclic nucleotides (number of experimental results from PDE activity other signals at steady state intracellular It has been shown to be controlled by a variety of information from the transduction system, occupying an important position in the "cross-talk" between signal transduction pathways and intracellular control networks [Trend. Pharmacol. Sci., 2i, 217 (1997), Physiol. Rev., 75, 725 (1995), Arch.Biochem. Biopys. 3 322, 1 (1995), and Endocrinol. Rev., 16, 370 (1995)] .
脊椎動物の PDEは構造、 局在、 制御、 選択的 PDEP且害剤に対する感受性等 の異なるサブタイプおよびそれらのァイソフォームからなる大きなスーパ一ファ ミリーを形成している Trend. Pharmacol. Sci., 11, 150 (1990)、 Physiol. Rev., 75, 725 (1995)、 Arch. Biochem. Biophys., , 1 (1995)、 Endocrinol. Revリ 16, 370 (1995)、 Kidney International, 55, 29 (1999)、 Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990)、 及び Phosphodiesterase Inhibitors, Academic Press, New York (1996)〕。 PD Eスーパ一ファミリーは現在までに生化学的特性、酵素学的特性、 さらには対'応する cDNAのクロ一ン化によるアミノ酸配列の比較等により、 以 下の 10種類のファミリ一 (PDE 1〜PDE 10) に分類されている 〔Kidney International, 55, 29 (1999)、 J. Biol. Chem., 274, 18438 (1999)、 Gene, 234, 109 (1999)、 及び Proc, Natl. Acad. Sci. USA, 96, 簡 (1999)〕 。 Vertebrate PDEs have structure, localization, regulation, selective PDEP and sensitivity to harmful agents, etc. Trend. Pharmacol. Sci., 11, 150 (1990), Physiol. Rev., 75, 725 (1995), Arch. Which form a large family of different subtypes and their isoforms. Biochem. Biophys.,, 1 (1995), Endocrinol. Rev. 16, 370 (1995), Kidney International, 55, 29 (1999), Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990), and Phosphodiesterase Inhibitors, Academic Press, New York (1996)]. To date, the PDE superfamily has been characterized by its biochemical and enzymatic properties, as well as the comparison of amino acid sequences by cloning of the corresponding cDNAs. ~ PDE 10) (Kidney International, 55, 29 (1999), J. Biol. Chem., 274, 18438 (1999), Gene, 234, 109 (1999), and Proc, Natl. Acad. Sci. USA, 96, Brief (1999)].
1. Ca2+/カルモジュリン依存性 PDE (PDE 1) 1. Ca 2+ / calmodulin-dependent PDE (PDE 1)
2. c GMPで刺激される PDE (PDE 2) 2. c GMP stimulated PDE (PDE 2)
3. cGMPで阻害される PDE (PDE 3) 3. PDEs inhibited by cGMP (PDE 3)
4. cAMP特異的 PDE (PDE 4) 4. cAMP-specific PDE (PDE 4)
5. cGMP特異的 PDE (PDE 5) 5. cGMP-specific PDE (PDE 5)
6. cGMP特異的フォトレセプ夕一 PDE (PDE 6) 6. cGMP-specific photoreceptor Yuichi PDE (PDE 6)
7. 高親和性、 c AMP特異的 PDE (PDE 7) 7. High affinity, cAMP specific PDE (PDE 7)
8. 高親和性、 cAMP特異的 PDE (PDE 8) 8. High affinity, cAMP specific PDE (PDE 8)
9. cGMP特異的 PDE (PDE 9) 9. cGMP-specific PDE (PDE 9)
10. c AMP PDE cAMPで阻害される cGMP PDE (PDE 10) 多くのファミリ一は、 異なる遺伝子によりコードされるサブタイプおよびそれ らのスプライスバリアント (ァイソフォーム) からなる 〔Kidney International, 55, 29 (1999)、 Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990)、 及び Biochem. Biophys. Res. Commun., 261, 551 (1999)〕 。 いくつかの P D Eァイソフォームについては 組織および細胞特異的な発現が報告されている〔Trend. Pharmacol. Sci. ,22, 217 (1997)、 Physiol. Rev., 75, 725 (1995)、 及び Arch. Biochem. Biophys., 3 2, 1 (1995)〕 。 現在までに、 30種以上の PDE分子種が報告されているが、 さらな る未知の P D Eの存在が想定されている。 10. c AMP PDE cGMP PDE inhibited by cAMP (PDE 10) Many families consist of subtypes encoded by different genes and their splice variants (isoforms) [Kidney International, 55, 29 (1999), Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990), and Biochem. Biophys. Res. Commun., 261, 551 (1999)]. Tissue and cell-specific expression has been reported for several PDE isoforms [Trend. Pharmacol. Sci., 22, 217 (1997), Physiol. Rev., 75, 725 (1995), and Arch. Biochem. Biophys., 32, 1 (1995)]. To date, more than 30 species of PDE have been reported, but more unknown PDEs are expected.
PDEは通常 3つの機能ドメインからなる構造を有している 〔Trend. PDEs usually have a structure consisting of three functional domains (Trend.
Pharmacol. Sci., 22, 217 (1997)、 Physiol. Rev., 75, 725 (1995)、 Arch. Biochem. Biophys., 322, 1 (1995)、 及び Endocrinol. Rev., 16, 370 (1995)〕 。 中央から C末端側にかけて存在する約 270アミノ酸よりなる領域 (catalytic core domain)はすべての脊椎動物由来] PDEで保存されており、触媒ドメインを構成す る。 この領域は個々の PDEファミリー内の遺伝子間でよく保存されており、 ァ ミノ酸配列で 80%以上の一致が認められる。 また、 異なる PDE遺伝子フアミ リ一間ではアミノ酸配列で 25 %~ 40%程度一致している。 catalytic core domainには 2つの Zn2+結合モチーフが存在している 〔J. Biol. Chem. , 69, 22477 (1994)) が、 PDE 3ファミリ一の catalytic core domainには、 他の PDEファ ミリーには存在しない 44アミノ酸の挿入があるために最初の Zn2+結合モチー フが破壊されている。 全ての PDEの触媒ドメインに HDXXHXXXXN (ァ ミノ酸残基は一文字表記で示す。 H; ヒスチジン、 D;ァスパラギン酸、 N;ァ スパラギン、 X;任意のアミノ酸残基)の保存されたモチーフが見出されている。 Pharmacol. Sci., 22, 217 (1997), Physiol. Rev., 75, 725 (1995), Arch. Biochem. Biophys., 322, 1 (1995), and Endocrinol. Rev., 16, 370 (1995). ]. The region consisting of about 270 amino acids (catalytic core domain) existing from the center to the C-terminal side is conserved in all vertebrate-derived PDEs and constitutes the catalytic domain. This region is well conserved between genes within individual PDE families, with over 80% identity in the amino acid sequence. In addition, amino acid sequences of about 25% to 40% are identical between different PDE gene families. Although two Zn 2+ binding motifs exist in the catalytic core domain (J. Biol. Chem., 69, 22477 (1994)), the catalytic core domain of one of the PDE3 families contains other PDE families. The first Zn 2+ binding motif has been destroyed due to the insertion of a 44 amino acid that is not present in the cell. A conserved motif of HDXXHXXXXN (amino acid residues are represented by one letter; H; histidine, D; aspartic acid, N; asparagin, X; any amino acid residue) is found in the catalytic domain of all PDEs. Have been.
PDE 4の catalytic core domainを含む領域は大腸菌で発現され、 P D E活性 を有していることが示された 〔J. Biol. Chem., ML, 18929(1992)〕 。 保存され ている触媒ドメインには P D Eファミリ一特異的な基質親和性や阻害剤に対する 感受性を規定する配列が含まれている CJ. Biol. Chem. , 274, 4839 (1999)〕。 触媒ドメインがよく保存されているのに対して Ν末端側の制御ドメインは P D Εサブタイプ、 ァイソフォーム間で構造および大きさが異なっている 〔Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990)〕 。 このドメインには、 リガンド結合部位、 リン 酸化部位、 膜結合部位、 蛋白-蛋白相互作用に関与する配列等が含まれている。 相対的に小さい C末端ドメインの機能的な重要性については十分には明らかに されていない。 PDE4B2Bアイソフォ一ムの 487番目のセリン残基が mitogen- activated protein kinaseによりリン酸化を受けることが報告されてい る Biochem. J., 316, 751 (1996)〕 。 The region containing the catalytic core domain of PDE 4 was expressed in E. coli and was shown to have PDE activity [J. Biol. Chem., ML, 18929 (1992)]. The conserved catalytic domain contains sequences that define the specificity of the PDE family for substrate affinity and sensitivity to inhibitors. CJ. Biol. Chem., 274, 4839 (1999)]. While the catalytic domain is well conserved, the 制 御 terminal regulatory domain is PD ΕThe structure and size differ between subtypes and isoforms [Cyclic Nucleotide Phosphodiesterases: Structure, Regulation and Drug Action, John Wiley & Sons, New York (1990)]. This domain contains ligand binding sites, phosphorylation sites, membrane binding sites, sequences involved in protein-protein interactions, and the like. Fully clear the functional significance of relatively small C-terminal domains It has not been. It has been reported that the serine residue at position 487 of the PDE4B2B isoform is phosphorylated by mitogen-activated protein kinase (Biochem. J., 316, 751 (1996)).
PDEサブタイプあるいはァイソフォーム特異的なァゴニストあるいはアン夕 ゴニストは、 細胞内環状ヌクレオチド量の変動が関与している多種類の疾患に対 して、 予防的あるいは治療的な効果が期待される。 例えば免疫および炎症応答に 関する多くの機能は細胞内 c AMPを増加させる薬剤により阻害される 〔Mol. Pharmacol., 47, 1164 (1995)〕 。 一方、 cGMPは、 平滑筋、 肺および脳細胞の 機能に関与している CPharmac. Ther., 51, 13 (1991)〕 。 非特異的 PDE阻害剤 、 さらには PDEサブタイプに選択性を示す阻害剤が合成され、 それらのうちい くつかについては治療薬としての可能性が実験的あるいは臨床的に検討されて ヽ る [: Trends Pharmacol. Sci., 22, 217 (1997)、 Physiol., Rev., 75, 725 (1995) 、 Phosphodiesterase Inhibitors, Academic Press, New York (1996)〕 。 例えば 、 PDE 3阻害剤は、 抗血栓剤、. 降圧剤およびうつ血性心不全治療に有用な強心 剤として開発されている。 最近、 PDE 3 Bがレブチンのインスリン分泌阻害に 関与していることが報告された 〔J. Clin. Invest., ΙΟ , 869 (1998)〕 。 PDE 4阻害剤としては、 rolipramが鬱病治療薬として用いられている。 TNF-ひは PDE subtype or isoform-specific agonists or antagonists are expected to have a prophylactic or therapeutic effect on a variety of diseases involving variations in intracellular cyclic nucleotide levels. For example, many functions related to the immune and inflammatory responses are inhibited by agents that increase intracellular cAMP [Mol. Pharmacol., 47, 1164 (1995)]. On the other hand, cGMP is involved in the functions of smooth muscle, lung and brain cells. CPharmac. Ther., 51, 13 (1991)]. Non-specific PDE inhibitors and inhibitors that are selective for PDE subtypes have been synthesized, and some of them have been studied experimentally or clinically for their therapeutic potential [ Trends Pharmacol. Sci., 22, 217 (1997), Physiol., Rev., 75, 725 (1995), Phosphodiesterase Inhibitors, Academic Press, New York (1996)]. For example, PDE 3 inhibitors have been developed as antithrombotic agents, antihypertensive agents, and inotropic agents useful in treating depressive heart failure. Recently, it has been reported that PDE 3B is involved in the inhibition of insulin secretion by lebutin [J. Clin. Invest., ΙΟ, 869 (1998)]. As a PDE 4 inhibitor, rolipram has been used as a therapeutic agent for depression. TNF-Hi
で HI V-1の複製を促進することが報告されている。 rol ipramは Promotes replication of HIV-1. rol ipram
lipopolysaccharide刺激による TNF- 産生を抑制することから、 HIV-1複製を阻害 する可能性が指摘されている 〔AIDS, 9, 1137 (1995)〕 。 また、 TNF- 、 イン夕 一フエロンァなどのサイ トカイン産生を抑制する活性を有していることから、 脳 脊髄炎 (encephalomyelitis^ 多発性硬化症 (MS)、 遅発性運動異常 (tardive dyskinesia)などに対する効果も期待されている。 PDE 4阻害剤は、抗炎症作用 を有することからリウマチなどの治療薬として、 また抗炎症作用のみならず気管 支拡張作用も有することから喘息の治療薬として、 その可能性が評価されている CClin. Exp. Immunol.,纖, 126 (1995)、 Am. J. Respir. Grit. Care Med., 157, 351 (1998)〕 。 PDEは多くの細胞の増殖に関与しており、 悪性腫瘍の治療薬の 夕一ゲヅトとしても興味が持たれている 〔Proc. Natl. Acad. Sci. USA, 91, 5330 ( 1994)〕 。 また、 ラヅトメサンギゥム細胞を用いた系で、 P D E 3阻害剤がメサ ンギゥム細胞の分裂抑制作用を有すること 〔J. Clin. Invest. , 96, 401 (1995) 〕 、 P D E 4阻害剤が活性酸素代謝産物 (reactive oxygen metabolite)の産生を 抑制することが報告されている J. Biol . Chem. , 272, 9854 (1997)) 。 さらに、 抗 Thy- 1腎炎ラッ卜で P D E阻害剤が蛋白尿の進展を抑制することが示された〔J. Clin. Invest. , 98, 262 (1996)〕 。 It has been pointed out that HIV-1 replication may be inhibited by suppressing TNF-production by lipopolysaccharide stimulation [AIDS, 9, 1137 (1995)]. In addition, it has activity to suppress the production of cytokines such as TNF- and inuichi-feron-a, so it can be used for encephalomyelitis (encephalomyelitis ^ multiple sclerosis (MS), tardive dyskinesia, etc.) PDE 4 inhibitors have anti-inflammatory effects and are expected to be used as therapeutic agents for rheumatism, etc. In addition, they have anti-inflammatory effects as well as bronchodilator effects, and as therapeutic agents for asthma. Exp. Immunol., Fiber, 126 (1995), Am. J. Respir. Grit. Care Med., 157, 351 (1998), whose potential has been evaluated.] PDE is involved in the proliferation of many cells Of the treatment of malignant tumors It is also of interest as an evening gate [Proc. Natl. Acad. Sci. USA, 91, 5330 (1994)]. In addition, in a system using rat mesangial cells, a PDE 3 inhibitor has a mitogenic effect on mesangial cells [J. Clin. Invest., 96, 401 (1995)]. Inhibits the production of reactive oxygen metabolites (J. Biol. Chem., 272, 9854 (1997)). Furthermore, PDE inhibitors have been shown to suppress the development of proteinuria in anti-Thy-1 nephritis rats [J. Clin. Invest., 98, 262 (1996)].
糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウ マチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パ一キンソン病、 痴呆、 感染 症または悪性腫瘍などのような環状ヌクレオチドを介したシグナル伝達の異常が 発症および病態の進展に関与している可能性のある疾患を予防あるいは治療する ために、 その疾患に関与する P D Eサブタイプ、 さらにはァイソフォーム選択的 なァゴニスト、 アン夕ゴニストの開発が求められている。 非特異的な薬剤は目的 とする組織および細胞以外の組織、 細胞における c AMPあるいは c GM Pを介 するシグナル伝達系への影響が問題になるのであまり望ましくない。 Diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease or malignancy In order to prevent or treat diseases in which abnormalities in signal transduction via cyclic nucleotides may be involved in the onset and progression of disease states, select PDE subtypes involved in the disease and further select isoforms There is a demand for the development of an effective agonist and an evening gonist. Non-specific drugs are less desirable because their effects on cAMP or cGMP-mediated signaling in tissues and cells other than the target tissue and cells are problematic.
P D Eの場合、 酵素の存在量が極微量であること、 基本的に同様の反応を触媒 しており、 基質特異性が重複していることなどから組織あるいは細胞からのアイ ソフォームの精製及び単離は容易ではない。 古典的な酵素学的手法を用いた新規 なアイソフオームの単離は、 現在用いられている精製法の限界および単一の精製 酵素標品が得られたことを確認することの困難さにより阻まれている。 他のアブ ローチとして、 ァイソフォーム選択的なァヅセィ条件を用いることや、 免疫学的 な手法を用いたサブタイプゃァイソフォームの分離及び同定が行われてきた。 こ れらのアプローチには、 サブタイプやアイソフォームを同定するために必要な判 定基準の確立が必要であり、 時間と労力を要するばかりでなく、 技術的に困難な 場合もある。 結果として、 多くの研究は、 複数のサブタイプあるいはアイソフォ —ムを含む部分精製 P D E標品を用いて行われてきた。 In the case of PDEs, the minimal amount of enzyme present and catalysis of basically the same reaction, and the overlap of substrate specificities, etc. results in purification and isolation of isoforms from tissues or cells. Separation is not easy. Isolation of novel isoforms using classical enzymological techniques is hampered by the limitations of currently used purification methods and the difficulty in confirming that a single purified enzyme preparation has been obtained. It is rare. Other approaches have been to use isoform-selective assay conditions and to separate and identify subtype isoforms using immunological techniques. These approaches require establishing the criteria needed to identify subtypes and isoforms, which can be time consuming, labor intensive, and technically challenging. As a result, many studies have been performed with partially purified PDE preparations containing multiple subtypes or isoforms.
組織あるいは細胞特異的な新規; P D Eァイソフォームを組換え D N A技術を用 いて大量に調製することができれば、 これらの困難を克服でき、 より特異的かつ 安全なァゴニストおよびアン夕ゴニスト開発が可能になることが期待される。 発明の開示 New tissue or cell specific; PDE isoforms using recombinant DNA technology If it can be prepared in large quantities, it is expected that these difficulties can be overcome and more specific and safe agonist and angelic gonist development will be possible. Disclosure of the invention
本発明は、 新規 P D Eポリぺプチド及び該 P D Eポリぺプチドをコードする D NAを提供することを目的とする。 本発明はまた、 該 PDEポリペプチド又は該 ポリペプチドを認識する抗体などを利用して、 糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分 裂病、 躁鬱病、 パーキンソン病、 痴呆、 感染症または悪性腫瘍等の予防及び/又 は治療のための医薬を提供することを目的とする。 An object of the present invention is to provide a novel PDE polypeptide and a DNA encoding the PDE polypeptide. The present invention also provides diabetes, ischemic heart disease, hypertension, nephritis, nephritis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety using the PDE polypeptide or an antibody recognizing the polypeptide. It is an object of the present invention to provide a medicament for preventing and / or treating symptom, fibrosis, manic depression, Parkinson's disease, dementia, infectious disease or malignant tumor.
本発明者らは、 HepG2細胞から c D N Aライブラリ一を調製しランダムに塩基配 列の解析を行った。 ヒト PDE10A (GenBank:AB020593) の遺伝子配列情報を基に、 このようにして取得したヒト cDN A配列に対して、 BLASTサーチ相同性検索ソフ トウエアを用いて解析し、ヒト PDE10Aおよびヒト PDE5Aの触媒部位と相同性の認め られる部分配列を見出した。 これらの配列を解析し、 ポリペプチドを発現させて P D E活性を検出することにより、 本発明を完成するに至った。 The present inventors prepared a cDNA library from HepG2 cells and randomly analyzed a base sequence. Based on the gene sequence information of human PDE10A (GenBank: AB020593), the human cDNA sequence thus obtained was analyzed using BLAST search homology search software, and the catalytic sites of human PDE10A and human PDE5A were analyzed. A partial sequence having homology with was found. By analyzing these sequences, expressing the polypeptide and detecting the PDE activity, the present invention has been completed.
即ち、 本発明は以下の (1) 〜 (33) の発明に関する。 That is, the present invention relates to the following inventions (1) to (33).
( 1 ) 配列番号 1または配列番号 15に記載のァミノ酸配列から成るポリぺプ チド。 (1) A polypeptide comprising the amino acid sequence of SEQ ID NO: 1 or SEQ ID NO: 15.
(2) (1) に記載のポリペプチドをコードする DNA。 (2) DNA encoding the polypeptide according to (1).
(3) 配列番号 2または配列番号 16に記載の塩基配列を有する DNA。 (3) a DNA having the nucleotide sequence of SEQ ID NO: 2 or SEQ ID NO: 16;
(4) (2) または (3) に記載の DNAを含む組換えベクター。 (4) A recombinant vector containing the DNA of (2) or (3).
(5) (4) に記載の組換えべクタ一を保有する形質転換体。 (5) A transformant having the recombinant vector according to (4).
(6) 形質転換体が、 微生物、 動物細胞、 植物細胞および昆虫細胞から成る群 から選ばれる形質転換体である、 (5) に記載の形質転換体。 (6) The transformant according to (5), wherein the transformant is a transformant selected from the group consisting of microorganisms, animal cells, plant cells, and insect cells.
(7) 微生物が Escherichia属に属する微生物である、 ( 6 ) に記載の形質転換 体。 (8) 受託番号 FERM BP— 6976を有する、 ( 7 ) に記載の形質転換 体。 (7) The transformant according to (6), wherein the microorganism is a microorganism belonging to the genus Escherichia. (8) The transformant according to (7), having a deposit number of FERM BP-6976.
(9) (5) 〜 (8) のいずれかに記載の形質転換体を培地で培養し、 培養物 中に (1) に記載のポリペプチドを生成蓄積させ、 該培養物から該ポリペプチド を採取することを特徴とする、 (1) に記載のポリペプチドの製造方法。 (9) The transformant according to any one of (5) to (8) is cultured in a medium, the polypeptide described in (1) is produced and accumulated in the culture, and the polypeptide is isolated from the culture. The method for producing a polypeptide according to (1), wherein the polypeptide is collected.
(10) (2) または (3) に記載の DN Aの塩基配列中の連続した 5〜60 塩基と同じ配列を有するセンスオリゴヌクレオチド、 該センスオリゴヌクレオチ ドと相補的な配列を有するアンチセンスオリゴヌクレオチド、 およびこれらセン ス又はアンチセンスオリゴヌクレオチドのオリゴヌクレオチド誘導体から成る群 から選ばれるオリゴヌクレオチド。 (10) A sense oligonucleotide having the same sequence as the contiguous 5 to 60 bases in the nucleotide sequence of DNA according to (2) or (3), and an antisense oligonucleotide having a sequence complementary to the sense oligonucleotide Oligonucleotides selected from the group consisting of nucleotides and oligonucleotide derivatives of these sense or antisense oligonucleotides.
(11) オリゴヌクレオチド誘導体が、 オリゴヌクレオチド中のリン酸ジエス テル結合がホスホロチォェ一ト結合に変換されたォリゴヌクレオチド誘導体、 ォ リゴヌクレオチド中のリン酸ジエステル結合が N 3, -P 5' ホスホアミデート 結合に変換されたォリゴヌクレオチド誘導体、 ォリゴヌクレオチド中のリボース とリン酸ジエステル結合がぺプチド核酸結合に変換されたォリゴヌクレオチド誘 導体、 オリゴヌクレオチド中のゥラシルが C一 5プロビニルゥラシルで置換され たオリゴヌクレオチド誘導体、 ォリゴヌクレオチド中のゥラシルが C一 5チアゾ ールゥラシルで置換されたォリゴヌクレオチド誘導体、 ォリゴヌクレオチド中の シトシンが C— 5プロピニルシトシンで置換されたオリゴヌクレオチド誘導体、 オリゴヌクレオチド中のシトシンがフエノキサジン修飾シトシン ( (11) Oligonucleotide derivative is an oligonucleotide derivative in which the phosphoric ester bond in the oligonucleotide is converted to a phosphorothioate bond, and the phosphodiester bond in the oligonucleotide is N3, -P5 'phosphoramidite. Oligonucleotide derivative converted to date bond, Oligonucleotide derivative in which ribose and phosphodiester bond in oligonucleotide are converted to peptide nucleic acid bond, Peracyl in oligonucleotide is C-15 provinylperacyl Oligonucleotide derivative in which oligosaccharide in oligonucleotide is substituted with C-15 thiazoleperacyl, oligonucleotide derivative in which cytosine in oligonucleotide is substituted with C-5 propynylcytosine, oligo In nucleotides Tosin is phenoxazine-modified cytosine (
phenoxazine-modified cytosine)で置換されたォリゴヌクレオチド誘導体、 D N A中のリボースが 2, 一 0—プロピルリボースで置換されたォリゴヌクレオチド 誘導体およびオリゴヌクレオチド中のリボースが 2' —メ トキシエトキシリボー スで置換されたオリゴヌクレオチド誘導体から成る群から選ばれるオリゴヌクレ 才チド誘導体である、 (10) に記載のォリゴヌクレオチド。 Oligonucleotide derivatives substituted with phenoxazine-modified cytosine), oligoribonucleotide derivatives in which the ribose in DNA is substituted with 2,10-propylribose, and ribose in the oligonucleotide with 2'-methoxyethoxy ribose The oligonucleotide according to (10), which is an oligonucleotide derivative selected from the group consisting of substituted oligonucleotide derivatives.
(12) (10) または (11) に記載のオリゴヌクレオチドを用いることを 特徴とする、 ( 1)に記載のポリべプチドをコードする mRN Aを検出する方法。 (13) (10) または (11.) に記載のオリゴヌクレオチドを用いることを 特徴とする、 (1) に記載のポリペプチドの発現を抑制する方法。 (12) A method for detecting mRNA encoding the polypeptide according to (1), comprising using the oligonucleotide according to (10) or (11). (13) The method for suppressing the expression of the polypeptide according to (1), comprising using the oligonucleotide according to (10) or (11.).
(14) ( 1 ) に記載のポリぺプチドを認識する抗体。 (14) An antibody that recognizes the polypeptide of (1).
(15) (14) に記載の抗体を用いることを特徴とする、 (1) に記載のポ リぺプチドの免疫学的検出法。 (15) The method for immunologically detecting a polypeptide according to (1), comprising using the antibody according to (14).
(16) (14) に記載の抗体を用いることを特徴とする、 (1) に記載のポ リぺプチドの免疫組織染色法。 (16) The method for immunohistochemical staining of a polypeptide according to (1), wherein the antibody according to (14) is used.
(17) (14) に記載の抗体を含有する、 免疫組織染色剤。 (17) An immunohistochemical, comprising the antibody according to (14).
(18) (1) に記載のポリぺプチドと被験試料とを接触させることを特徴と する、 該ポリべプチドの有するホスホジエステラーゼ活性を変動させる化合物の スクリ一ニング方法。 (18) A method for screening a compound that varies the phosphodiesterase activity of the polypeptide, which comprises contacting the polypeptide according to (1) with a test sample.
(19) (18) に記載の方法により得られる化合物。 (19) A compound obtained by the method according to (18).
(20) (1) に記載のポリペプチドを発現する細胞と被験試料とを接触させ ることを特徴とする、 該ポリペプチドをコードする遺伝子の発現を変動させる化 合物のスクリ一二ング方法。 (20) A method for screening a compound that changes the expression of a gene encoding the polypeptide, comprising contacting a cell that expresses the polypeptide according to (1) with a test sample. .
(21) (12) に記載の方法を用いて (1) に記載のポリペプチドをコード する mR N Aを検出することにより、 該ポリペプチドをコードする遺伝子の発現 の変動を検出することを特徴とする、 (20) に記載のスクリーニング方法。 (21) A method according to (12), wherein the mRNA encoding the polypeptide according to (1) is detected to detect a change in the expression of a gene encoding the polypeptide. The screening method according to (20).
(22) (15) に記載の方法を用いて (1) に記載のポリペプチドを検出す ることにより、 該ポリペプチドをコードする遺伝子の発現の変動を検出すること を特徴とする、 (20) に記載のスクリーニング方法。 (22) A method according to (15), wherein the polypeptide according to (1) is detected to detect a change in the expression of a gene encoding the polypeptide. ).
(23) (20) 〜 (22) のいずれかに記載の方法により得られる化合物。 (23) A compound obtained by the method according to any one of (20) to (22).
(24) (1) に記載のポリペプチドをコードする遺伝子の転写を制御するプ 口モー夕一 DNA。 (24) A promoter DNA that controls transcription of a gene encoding the polypeptide according to (1).
(25) (24) に記載のプロモー夕一 DN Aおよび該プロモ一夕一 DN Aの 下流に連結させたレポ一夕一遺伝子を含有するプラスミ ドを保有する形質転換体 と被験試料とを接触させ、 該レポー夕一遺伝子の翻訳産物含量を測定することを 特徴とする、 該プロモー夕一による転写の効率を変動させる化合物のスクリ一二 ング方法。 (25) The test sample is contacted with a transformant having the promoter DNA described in (24) and a plasmid containing the repo overnight gene linked downstream of the promoter DNA. Measuring the translation product content of the reporter gene. A method for screening a compound which varies the efficiency of transcription by said promoter.
(26) レポ一夕一遺伝子が、 クロラムフエニコ一ル .ァセチルトランスフエ ラ一ゼ遺伝子、 —ガラクトシダ一ゼ遺伝子、 ルシフェラーゼ遺伝子、' β一グル クロニダーゼ遺伝子、 ェクオリン遺伝子おょぴグリーン ·フルォレヅセント ·プ 口ティン遺伝子から成る群から選ばれる遺伝子である、 (25) に記載のスクリ 一二ング方法。 (26) The repo overnight gene is the chloramphenicone acetyltransferase gene, the galactosidase gene, the luciferase gene, the 'β-glucuronidase gene, the equorin gene, and the green fluorescent protein. The screening method according to (25), which is a gene selected from the group consisting of tin genes.
(27) (25) または (26) に記載の方法により得られる化合物。 (27) A compound obtained by the method according to (25) or (26).
(28) (1) に記載のポリペプチドを含有する、 医薬。 (28) A medicament comprising the polypeptide according to (1).
(29) (10) または (11) に記載のオリゴヌクレオチドを含有する、 医 某。 (29) A physician comprising the oligonucleotide according to (10) or (11).
(30) (14) に記載の抗体を含有する、 医薬。 (30) A medicament comprising the antibody according to (14).
(31) ( 19)、 (23) または (27) に記載の化合物を含有する、 医薬。 : (32) 糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘 息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴 呆、 感染症または悪性腫瘍の予防または治療のための医薬である、 (28) から (31) A medicament comprising the compound according to (19), (23) or (27). : (32) Diabetes, ischemic heart disease, hypertension, nephritis, Tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease or malignancy From (28), which is a medicament for the prevention or treatment of tumors
(31) の何れかに記載の医薬。 The medicament according to any one of (31).
(33) 糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘 息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴 呆、 感染症または悪性腫瘍の診断のための医薬である、 (28) から (31) の 何れかに記載の医薬。 図面の簡単な説明 (33) Diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease or malignancy The medicament according to any one of (28) to (31), which is a medicament for diagnosis of: BRIEF DESCRIPTION OF THE FIGURES
図 1は、 新規ヒト PDEのアミノ酸配列 (上段:アミノ酸番号を数字 +, で記載) と、 ヒト PDE5A (GenBank: CAA06170) のアミノ酸配列(下段:アミノ酸番号を数字 + "で記載)との比較を示した図である。アステリスクは一致しているアミノ酸残 基、 ピリォドは相同性のあるァミノ酸残基を示す。(ァミノ酸残基は一文字表記で 示す。 :)下線は HDXXHXXXXNモチ一フを示す。 Figure 1 shows a comparison between the amino acid sequence of the new human PDE (upper row: amino acid numbers are indicated by numbers + and) and the amino acid sequence of human PDE5A (GenBank: CAA06170) (lower row: amino acid numbers are indicated by numbers + "). An asterisk indicates a matching amino acid residue, and a period indicates a homologous amino acid residue. Show. :) Underline indicates HDXXHXXXXN motivation.
図 2は、 新規ヒト PDEのアミノ酸配列 (上段:アミノ酸番号を数字 +, で記載) と、 ヒ hPDE10A(GenBank: BAA78034)のアミノ酸配列(下段:アミノ酸番号を数字 Figure 2 shows the amino acid sequence of the new human PDE (upper row: the amino acid number is indicated by a number +,) and the amino acid sequence of the hPDE10A (GenBank: BAA78034) (lower row: the amino acid number is a number)
+ "で記載)との比較を示した図である。ァステリスクは一致しているアミノ酸残 基、 ピリォドは相同性のあるアミノ酸残基'を示す。(ァミノ酸残基は一文字表記で 示す。 )下線は HDXXHXXXXNモチーフを示す。 + Asterisk). An asterisk indicates a matching amino acid residue, and a period indicates a homologous amino acid residue. (Aminoic acid residues are indicated by one letter.) The underline indicates the HDXXHXXXXN motif.
図 3は、 プラスミド P200-EBの構築過程および制限酵素地図を示した図である。 図 4は、新規ヒト PDEホモログ c DNAの一部の配列(約 0.2kb)をプローブとして ヒト心臓、 脳、 胎盤、 肺、 肝臓、 骨格筋、 腎臓、 膝臓の poly(A)+ MAフィル夕一 CHurnan Multiple Tissue Northern Blotsのフィル夕一(Clontech社製)〕 および ヒト心臓、脳、肝臓、脬臓、胎盤、肺の poly(A)+ RNAフィルター〔Human Normal Tissue mENA blot I (Normalized)のフィル夕一 (東洋紡社製)〕 に対してノ一ザンハイブ リダイゼ一ションを行なった結果を示す図である。 FIG. 3 shows the construction process of plasmid P200-EB and a restriction enzyme map. Fig. 4 shows a poly (A) + MA file of human heart, brain, placenta, lung, liver, skeletal muscle, kidney, and knee using a partial sequence (about 0.2 kb) of the novel human PDE homolog cDNA as a probe. -Filtration of CHurnan Multiple Tissue Northern Blots (Clontech)] and poly (A) + RNA filter of human heart, brain, liver, kidney, placenta and lung [Human Normal Tissue mENA blot I (Normalized) filter] FIG. 7 is a diagram showing the results of performing Northern Hybridization on Yuichi (Toyobo Co., Ltd.).
図 5は、プラスミド pGST— PDEの構築過程および制限酵素地図を示した図である。 図 6は、 発現大腸菌可溶性画分における PDE活性測定の結果を示す。 GSTはぺク 夕一のみを導入した大腸菌、 GST- PDEは GST-PDE融合蛋白発現大腸菌を示す。 FIG. 5 is a diagram showing a construction process of a plasmid pGST-PDE and a restriction enzyme map. FIG. 6 shows the results of PDE activity measurement in the expressed E. coli soluble fraction. GST indicates Escherichia coli transfected with only black and white, and GST-PDE indicates Escherichia coli expressing the GST-PDE fusion protein.
図 7は、 プラスミド p23— 2kおよび p23— lkの構築過程および制限酵素地図を示 した図である。 FIG. 7 is a diagram showing the construction process of plasmids p23-2k and p23-lk and a restriction enzyme map.
図 8は、新規ヒト PDEのアミノ酸配列(上段)と、 ヒト PDE5A (GenBank: CAA06170 ) のアミノ酸配列(下段)との比較を示した図である。 アステリスクは一致してい るァミノ酸残基、 ピリォドは相同性のあるァミノ酸残基を示す。(ァミノ酸残基は 一文字表記で示す。 )下線は HDXXHXXXXNモチーフを示す。 FIG. 8 is a diagram showing a comparison between the amino acid sequence of the novel human PDE (upper) and the amino acid sequence of human PDE5A (GenBank: CAA06170) (lower). Asterisks indicate identical amino acid residues, and periods indicate homologous amino acid residues. (Amino acid residues are indicated by single letter notation.) Underline indicates HDXXHXXXXN motif.
図 9は、 新規ヒト PDEホモログ cDNAの配列情報を基に Ρ(¾プライマ一を設計し、 ヒト滕臓、 肺、 乳腺、 前立腺、 骨格筋、 精巣各組織の mMAより調製した cDNAを鎵 型に PCRを行なった。 増幅産物をァガロース電気泳動した結果を示す。 Figure 9 shows the Ρ (¾ primer designed based on the sequence information of the novel human PDE homolog cDNA, and the cDNA prepared from mMA of human tissues of the kidney, lung, mammary gland, prostate, skeletal muscle, and testis. PCR was performed and the results of agarose electrophoresis of the amplified product are shown.
上記図において、 kbはキロ塩基対(kilobase pairs)を示し、 Apはアンピシリン 耐性遺伝子を示し、 T7は T7プロモーターを示し、 GSTはグル夕チオン Sトランス フェラ一ゼを示す。 発明を実施するための最良の形態 In the above figure, kb indicates kilobase pairs, Ap indicates an ampicillin resistance gene, T7 indicates a T7 promoter, and GST indicates glutransthione S trans. Show Ferrarize. BEST MODE FOR CARRYING OUT THE INVENTION
本発明のポリぺプチドは、 下記の何れかのアミノ酸配列から成ることを特徴と する。 The polypeptide of the present invention is characterized by comprising any one of the following amino acid sequences.
(A) 配列番号 1または配列番号 1 5に記載のアミノ酸配列:又は (A) the amino acid sequence of SEQ ID NO: 1 or SEQ ID NO: 15, or
( B ) 配列番号 1または配列番号 1 5に記載のアミノ酸配列において 1以上のァ ミノ酸が欠失、 置換及び/又は付加されたアミノ酸配列からなり、 かつホスホジ エステラーゼ活性を有するポリペプチドをコードするァミノ酸配列。 (B) an amino acid sequence represented by SEQ ID NO: 1 or SEQ ID NO: 15 wherein one or more amino acids are deleted, substituted and / or added, and encodes a polypeptide having phosphodiesterase activity Amino acid sequence.
配列番号 1または酉 S列番号 1 5に記載のアミノ酸配列において 1以上のァミノ 酸が欠失、 置換または付加されたアミノ酸配列からなり、 かつホスホジエステラ —ゼ (P D E ) 活性を有するポリぺプチドは、 Molecular Cloning, A Laboratory Manual, Second Edition, Cold Spring Harbor Laboratory Press ( 1989) (以下、 モレキュラー · クロ一ニング 第 2版と略す) 、 Current Protocols in Molecular Biology, Supplement 1〜38, John Wiley & Sons ( 1987-1997) (以下、 カレント 'プロトコル 'ィン 'モレキユラ 'バイオロジーと略す)、 Nucleic Acids Research, 10, 6487 (1982)、 Proc. Natl . Acad. Sci . USA, 79, 6409( 1982)ヽ Gene, 34, 315 (1985 )、 Nucleic Acids Research, 13, 4431 ( 1985)、 Proc. Natl . Acad. Sci , USA, 82, 488 (1985 )、 Proc. Natl. Acad. Sci . USA, 81, 5662 ( 1984)、 Science, 224, 1431 ( 1984)、 国際公開 W085/00817号、 及び Nature, 316, 601 ( 1985)等に記載の 部位特異的変異導入法を用いて、 例えば、 配列番号 1または配列番号 1 5で示さ れるァミノ酸配列を有するポリペプチドをコードする D N Aに部位特異的変異を 導入することにより、 取得することができる。 A polypeptide comprising the amino acid sequence of SEQ ID NO: 1 or Rooster S, which has at least one amino acid deleted, substituted or added in SEQ ID NO: 15, and having phosphodiesterase (PDE) activity, Molecular Cloning, A Laboratory Manual, Second Edition, Cold Spring Harbor Laboratory Press (1989) (hereinafter abbreviated as Molecular Cloning 2nd Edition), Current Protocols in Molecular Biology, Supplement 1-38, John Wiley & Sons (1987 -1997) (hereinafter abbreviated as current 'protocol' in 'molekiura' biology), Nucleic Acids Research, 10, 6487 (1982), Proc. Natl. Acad. Sci. USA, 79, 6409 (1982) ヽ Gene , 34, 315 (1985), Nucleic Acids Research, 13, 4431 (1985), Proc. Natl. Acad. Sci, USA, 82, 488 (1985), Proc. Natl. Acad. Sci. USA, 81, 5662 (1985). 1984), Science, 224, 1431 (1984), International Publication W085 / 00817, and Nature, 316, 601 (1985), etc. Using the site-directed mutagenesis method described, for example, by introducing a site-directed mutagenesis into a DNA encoding a polypeptide having an amino acid sequence represented by SEQ ID NO: 1 or SEQ ID NO: 15. Can be.
欠失、 置換もしくは付加されるアミノ酸の数は特に限定されないが、 上記の部 位特異的変異法等の周知の方法により欠失、 置換もしくは付加できる程度の数で あり、 1個から数十個、 好ましくは 1〜2 0個、 より好ましくは 1〜1 0個、 さ らに好ましくは 1〜5個である。 また、 本発明のポリべプチドがホスホジエステラーゼ活性を有するためには、 配列番号 1または 15に記載のァミノ酸配列との相同性が BLAST 〔 Although the number of amino acids to be deleted, substituted or added is not particularly limited, it is a number that can be deleted, substituted or added by a well-known method such as the above-described site-directed mutagenesis method, and is one to several tens. The number is preferably 1 to 20, more preferably 1 to 10, and still more preferably 1 to 5. Further, in order for the polypeptide of the present invention to have phosphodiesterase activity, the homology with the amino acid sequence of SEQ ID NO: 1 or 15 is determined by BLAST [
J.Mol.Biol., 2155 403(1990)〕 や FASTA (Methods in Enzymology, 183, 63 (1990) 〕等の解析ソフ トを用いて計算したときに、 少なくとも 60%以上、 好 ましくは 70%以上、より好ましくは 80%以上、さらに好ましくは 90%以上、 特に好ましくは 95%以上、 最も好ましくは 98%以上であることが好ましい。 ただし、 本発明のポリぺプチドには、 公知のポリぺプチドは含まれない。 J. Mol. Biol., 215 5 403 (1990)] or FASTA (Methods in Enzymology, 183, 63 (1990)), etc. It is preferably at least 70%, more preferably at least 80%, further preferably at least 90%, particularly preferably at least 95%, most preferably at least 98%. Does not include polypeptides.
本発明はまた、 上記した本発明のポリペプチドをコードする D N Aを提供する ものである。 本発明のポリペプチドをコードする DN Aの具体例として、 下記の 何れかの塩基配列を有する D N Aが挙げられる。 The present invention also provides a DNA encoding the above-mentioned polypeptide of the present invention. Specific examples of the DNA encoding the polypeptide of the present invention include DNA having any one of the following nucleotide sequences.
(A)配列番号 2または配列番号 16に記載の塩基配列: (A) the nucleotide sequence of SEQ ID NO: 2 or SEQ ID NO: 16:
(B)上記 (A) に記載の塩基配列とストリンジヱントな条件下でハイプリダイ ズし、 かつホスホジエステラーゼ活性を有するポリぺプチドをコ一ドする塩基 1 列。 (B) One nucleotide sequence that hybridizes with the nucleotide sequence described in (A) above under stringent conditions and encodes a polypeptide having phosphodiesterase activity.
上記の 「ストリンジェン卜な条件下でハイプリダイズし、 かつホスホジエステ ラーゼ活性を有するポリペプチドをコードする塩基配列」 とは、 配列番号 2また は配列番号 16に記載の塩基配列を有する DNAをプローブとして、 コロニー - ハイプリダイゼ一ション法、 プラーク .ハイプリダイゼ一ション法ぁるいはサザ ンブロットハイブリダイゼ一ション法等を用いることにより得られる DNAを意 味し、 具体的には、 コロニーあるいはプラーク由来の DNAを固定化したフィル 夕一を用いて、 0. 7〜1. 0mo 1/Lの NaC 1存在下、 65°Cでハイプリ ダイゼ一ションを行った後、 0. 1〜 2倍濃度の S S C (saline-sodium citrate ) 溶液 ( 1倍濃度の S S C溶液の組成は、 15 Ommo 1/L塩化ナトリゥム、 15mmo 1/Lクェン酸ナトリウムよりなる) を用い、 65°C条件下でフィル 夕-—を洗浄することにより同定できる DN Aをあげることができる。 The above “base sequence encoding a polypeptide that hybridizes under stringent conditions and has phosphodiesterase activity” refers to a DNA having the base sequence of SEQ ID NO: 2 or SEQ ID NO: 16 as a probe. , Colony-hybridization method, plaque; DNA obtained by using the hybridization method or Southern blot hybridization method, specifically, DNA derived from a colony or plaque. After performing hybridization at 65 ° C in the presence of 0.7-1.0mo1 / L NaC1 using the immobilized filter, the SSC (0.1- to 2-fold concentration) was used. saline-sodium citrate) solution (the composition of a 1x concentration SSC solution is composed of 15 Ommo 1 / L sodium chloride and 15 mmo 1 / L sodium citrate), and fill at 65 ° C. Can be identified by washing the DNA.
ハイプリダイゼ一シヨンは、 モレ ユラ一 'クロ一ニング第 2版、 カレント · プロトコル'ィン 'モレキユラ.バイオロジー、; DN A Clonin 1: Core Techniques. A Practical Approach, Second Edition, Oxford University Press (1995)等の 実験書に記載されている方法に準じて行うことができる。 Hydride is described in Mole Yura's' Clothing Second Edition, Current Protocol 'in' Molequira. Biology ,; DN A Clonin 1: Core Techniques. A Practical Approach, Second Edition, Oxford University Press (1995), etc. can be performed according to the method described in the experiment book.
ハイブリダイズ可能な D N Aとして具体的には、 BLAST (J.Mol.BioL, 215, 403, 1990)や F A S T A (Methods in Enzymology, 183, 63-69) 等の解析ソフ トを用いて計算したときに、 配列番号 2または配列番号 16で表される塩基配列 と少なくとも 80%以上、好ましくは 90%以上、さらに好ましくは 95%以上、 特に好ましくは 98 %以上の相同性を有する DN Aを挙げるこ'とができる。 Specifically, DNA that can be hybridized is calculated using analysis software such as BLAST (J. Mol. BioL, 215, 403, 1990) and FASTA (Methods in Enzymology, 183, 63-69). A DNA having at least 80% or more, preferably 90% or more, more preferably 95% or more, and particularly preferably 98% or more homology with the nucleotide sequence represented by SEQ ID NO: 2 or SEQ ID NO: 16. Can be.
ただし、 本発明の DN Aには、 公知の DN Aは含まれない。 However, the known DNAs are not included in the DNAs of the present invention.
以下、 本発明の実施方法および利用方法について詳細に説明する。 Hereinafter, a method for implementing and using the present invention will be described in detail.
[ 1 ]本発明の D N Aの取得およびオリゴヌクレオチドの調製 [1] Acquisition of DNA of the present invention and preparation of oligonucleotide
ヒト PDE10A(GenBank:AB020593)のアミノ酸配列と相同性をもつ遺伝子を、遺伝 子データペース、 蛋白質デ一夕べ一スより、 Blast、 Smith-Waterman法等を利用し たプログラムあるいはフレームサーチ 〔イスラエル、 コンピュジェン (Compugen ) 社製〕 相同性検索ソフトウェアを利用して検索する。 Genes with homology to the amino acid sequence of human PDE10A (GenBank: AB020593) were searched for from gene data bases and protein databases by using the Blast, Smith-Waterman method, etc. (Compugen)] Search using homology search software.
デ—夕ベースとしては GenBank、Swiss_Plot等の公的なデ一夕べ一スを利用する ことができる。 The public database such as GenBank and Swiss_Plot can be used as the database.
また私的に持っている cDNAライブラリー中のクローンの cDNAを、 ラン ダムかつ大規模に塩基配列決定し、 得られた配列デ一夕を集積し、 作製した私的 なデ—夕ペースを利用することもできる。 In addition, random and large-scale nucleotide sequencing of the cDNAs of the clones in the privately owned cDNA library was performed, and the obtained sequence data was integrated and the created private data base was used. You can also.
得られた、 ヒト PDE10A (GenBank:AB020593) と相同性をもつ遺伝子が、 EST (Expressed Sequence Tag) のように、 遺伝子の一部の塩基配列のみである場合 は、 以下のようにしてその cDNAの全長を得ることができ、 該 cDNAより本 発明の DN Aを取得することができる。 When the obtained gene having homology to human PDE10A (GenBank: AB020593) is only a partial base sequence of the gene, such as EST (Expressed Sequence Tag), The full length can be obtained, and the DNA of the present invention can be obtained from the cDNA.
本発明の D N Aの起源が特に制限されることはないが、 好ましくは哺乳動物で あり、 特に好ましくはヒトである。 The origin of the DNA of the present invention is not particularly limited, but is preferably a mammal, and particularly preferably a human.
(1) cDNAライブラリーの作製 (1) Preparation of cDNA library
c D N Aライブラリーを作製するために、 適切な細胞または組織より全 R N A あるいは mRNAを調製する。 c Total RNA from appropriate cells or tissues to create a DNA library Alternatively, prepare mRNA.
全: RNAを調製する方法として、 チォシアン酸グァニジン一トリフルォロ酢酸 セシウム法 〔Methods in Enzymology, 154, 3 (1987)〕 、 酸性グァニジンチオシ ァネ一卜 'フエノール 'クロ口ホルム (AGPC)法〔AnalyticaI Biochemistry, 1625 156 (1987), 及び実験医学 1937 (1991)〕 等を用いることができる。 Total: As methods for preparing RNA, guanidine thiocyanate-cesium trifluoroacetate method [Methods in Enzymology, 154, 3 (1987)], acid guanidine thiochanetone 'phenol' Cloguchiform (AGPC) method [AnalyticaI Biochemistry, 162 5 156 (1987), and Experimental Medicine 1937 (1991)].
全 RNAからポリ (A) +RNAとして mRNAを調製する方法として、 オリ ゴ (dT) 固定化セルロースカラム法 (モレキュラー 'クロ一ニング第 2版) 'や オリゴ dTラテックスを用いる方法等を用いることができる。 Methods for preparing mRNA as poly (A) + RNA from total RNA include the Oligo (dT) immobilized cellulose column method (Molecular 'Cloning 2nd Edition') and a method using oligo dT latex. it can.
ファース ト · トラック · mRNA単離キヅト 〔Fast Track mRNA Isolation Kit ;インビトロジヱン (Iiwitrogen) 社製〕、 クイック ·プレップ · mR N A精製 キヅト 〔Quick Prep mRNA Purification Kit; フアルマシア (Pharmacia) 社製〕 等のキットを用いて組織や細胞から直接 mRNAを調製することもできる。 Kits such as Fast Track mRNA Isolation Kit (Fast Track mRNA Isolation Kit; manufactured by Iiwitrogen) and Quick Prep mRNA purification kit (Quick Prep mRNA Purification Kit; manufactured by Pharmacia) It can also be used to prepare mRNA directly from tissues or cells.
適切な細胞または組織として、 データペースから見出された: E ST等が含まれ ていた cDNAライブラリ一の種類を調べ、 該ライブラリーを構築するために用 Vヽた細胞または組織、 あるいは該組織由来の細胞株等を用いることが好ましい。 得られた全 RNAあるいは mRNAを用い、 常法により cDNAライブラリー を作製する。 Appropriate cells or tissues were found from the database: Escherichia coli was searched for one type of cDNA library that contained EST, etc., and used to construct the library. It is preferable to use cell lines or the like derived from such cells. Using the obtained total RNA or mRNA, a cDNA library is prepared by an ordinary method.
cDNAライブラリ一作製法として、 モレキュラー クローニング第 2版や力 レント 'プロトコル 'イン ·モレキユラ ·バイオロジー、 DNA Clonin 1: Core Techniques, A Practical Approach, Second Eaition, Oxford University Press (1995)等に記載された方法、 あるいは市販のキット、 例えばス一パ一スクリプト •プラスミド ·システム ·フォ一 · cDNA シンセシス ·アンド ·プラスミ ド - ^7 p— n ^ SuperScript Plasmid System for cDNA Synthesis and Plasmid Cloning;ギブコ BRL (Gibco BRL) 社製〕 やザヅプー cDNA 'シンセシス · キ-ヅト 〔ZAP- cDNA Synthesis Kit, ストラ夕ジーン社製〕 を用いる方法等を あげることができる。 Methods for preparing a cDNA library are described in Molecular Cloning 2nd Edition, the current 'protocol' in Molecular Kiura Biology, DNA Clonin 1: Core Techniques, A Practical Approach, Second Eaition, Oxford University Press (1995), etc. Methods or commercially available kits, such as Superscript Plasmid System Plasmid cDNA Synthesis and Plasmid-^ 7 pn ^ SuperScript Plasmid System for cDNA Synthesis and Plasmid Cloning; Gibco BRL ) Co., Ltd.) or a method using Zappoo cDNA 'Synthesis Kit [ZAP-cDNA Synthesis Kit, Straugene Co., Ltd.].
cDNAライブラリーを作製するためのクロ一ニングベクターとしては、 大腸 菌 K 12株中で自立複製できるものであれば、 ファージベクタ一、 プラスミ ドべ クタ一等いずれでも使用できる。 Large intestine is used as a cloning vector for preparing a cDNA library. Any phage vector, plasmid vector, etc. can be used as long as they can replicate autonomously in the bacterial K12 strain.
具体的には、 ZAP Express〔ストラ夕ジ一ン社製、 Strategies, 5, 58 (1992) 〕、 Bluescript II SK (+) (Nucleic Acids Research, 17, 9494 (1989)〕、 Lambda ZAP II (ストラ夕ジ一ン社製) 、 ;gtlO、 Agtll 〔DNA Cloning, A Practical Approach, 1, 49 (1985)〕、 ATriplEx (クローンテック社製)、 え ExCell (ファ ルマシア社製) 、 pT7T318U (フアルマシア社製) 、 pcD2 (Mol. Cell. Biol., 3, 280 (1983)〕、 pUC 18 〔Gene, 33, 103 (1985)〕、 p AMo〔J. Biol. C em. , 268, Z2782-22787 (1993)、 別名 pAMoPRC3Sc (特開平 05- 336963) 〕 等を挙げるこ とができる。 Specifically, ZAP Express (Stratagene, Inc., Strategies, 5, 58 (1992)), Bluescript II SK (+) (Nucleic Acids Research, 17, 9494 (1989)), Lambda ZAP II (Strata GtlO, Agtll [DNA Cloning, A Practical Approach, 1, 49 (1985)], ATriplEx (Clontech), ExCell (Pharmacia), pT7T318U (Pharmacia) ), PcD2 (Mol. Cell. Biol., 3, 280 (1983)), pUC18 [Gene, 33, 103 (1985)], pAMo [J. Biol. Cem., 268, Z2782-22787 (1993) ), Also known as pAMoPRC3Sc (Japanese Patent Laid-Open No. 05-336963)].
宿主微生物としては、 大腸菌 Escherichia coliに属する微生物であればいずれ も用いることができる。 具体的には、 Escherichia coli XL卜 Blue MRF, 〔ストラ 夕ジーン社製、 Strategies, 5381 (1992)〕、 Escherichia coli C6QQ〔Genetics,As the host microorganism, any microorganism belonging to Escherichia coli can be used. Specifically, Escherichia coli XL Bok Blue MRF, [Stora evening Gene Co., Strategies, 5 3 81 (1992 ) ], Escherichia coli C6QQ [Genetics,
39, 440 (1954)〕、 Escherichia coli Y1088〔Science, 222, 778 (1983)〕、39, 440 (1954)), Escherichia coli Y1088 (Science, 222, 778 (1983)),
Escherichia coli Y109Q (Science, 222, 778 (1983)〕、 Escherichia coli NM522Escherichia coli Y109Q (Science, 222, 778 (1983)), Escherichia coli NM522
〔J. Mol. Biol., 166, 1 (1983)〕、 Escherichia coli K802〔J. Mol. BioL, 16,[J. Mol. Biol., 166, 1 (1983)], Escherichia coli K802 [J. Mol. BioL, 16,
118 (1966)〕、 Escherichia coli JM105〔Gene, 385275 (1985)〕、 Escherichia coli S0LRTM Strain (ストラタジーン社製) 、 Escherichia coli LE392 (モレキ ユラ— ·クローニング第 2版) 等を用いることができる。 上記方法により作製した c D N Aライブラリーに加え、 市販の c D N Aライブ ラリーも利用することができる。 118 (1966)], Escherichia coli JM105 [Gene, 38 5 275 (1985)], Escherichia coli S0LRTM Strain (manufactured by Stratagene), Escherichia coli LE392 (Molecular Cloning 2nd Edition), etc. can be used. . In addition to the cDNA library prepared by the above method, a commercially available cDNA library can also be used.
市販の cDNAライプラリーとして、 クロ一ンテック社、 ライフテックオリエ ン夕ル社等のヒト、 ゥシ、 マウス、 ラット、 ゥサギ等由来の各臓器 cDNAライ ブラリーをあげることができる。 Examples of commercially available cDNA libraries include cDNA libraries of various organs derived from humans, mice, rats, rats, and egrets, such as Clothtec and Lifetech Oriental.
(-2)本発明の DN Aの取得 (-2) Acquisition of the DNA of the present invention
上記 (1) で作製した cDNAライブラリ一より、 本発明の DNA又はその一 部を含有する cDNAクローンを、 ァイソト一プあるいは蛍光標識したプローブ を用いたコロニー ·ハイブリダィゼ一シヨン法あるいはプラーク ·ハイプリダイ ゼ一シヨン法 〔モレキユラ一 クローニング 第 2版〕 等により選択することがで きる。 From the cDNA library prepared in (1) above, the DNA of the present invention or a cDNA clone containing a part thereof was isolated or labeled with a fluorescent probe. Can be selected by the colony hybridization method or the plaque hybridization method [Molecular cloning 2nd edition] using E. coli.
プローブとしては、 一部明らかになつている塩基配列に基づいたプライマーを 用いて、 PCR CP CE. Protocols, Academic Press (1990)〕 を利用した方法で cDNAの一部を増幅した断片や、 一部明らかになつている塩基配列に基づいた オリゴヌクレオチドを利用することができる。 As a probe, a fragment obtained by partially amplifying a part of cDNA by a method using PCR CP CE. Protocols, Academic Press (1990)], Oligonucleotides based on known nucleotide sequences can be used.
プライマ一として、 全長 cDNAの 5, 末端側および 3, 末端側の両方の塩基 配列が E S T等により明らかになつている場合には、 その塩基配列に基づいて調 製したプライマ一を用いることができる。 When the nucleotide sequence of both the 5, 5 and 3 terminal ends of the full-length cDNA is known by EST, etc., a primer prepared based on the nucleotide sequence can be used as the primer. .
該 c D N Aの両端にアダプターを付加し、 このアダプタ一の塩基配列と一部明 らかになつている塩基配列に基づいたプライマ一で P CRを行う 5' -RACE (rapid amplification of c D NA ends)および 3,— R A C E〔Proc. Natl. Acad. Sci. USA, 8538998 (1988)〕 により、 プライマ一に用いた配列よりも 5' 末端側 および 3, 末端側の c D N A断片を得ることができる。 An adapter is added to both ends of the cDNA, and PCR is performed with a primer based on the base sequence partially identifiable with the base sequence of this adapter.5'-RACE (rapid amplification of cDNA ends) and 3,-RACE [Proc. Natl. Acad. Sci. USA, 85 3 8998 (1988)] to obtain cDNA fragments at the 5 'end and the 3' end from the sequence used for the primer. be able to.
得られた cDN A断片を連結することにより、 本発明の全長 DN Aを取得する ことができる。 By linking the obtained cDNA fragments, the full-length DNA of the present invention can be obtained.
また、 上記 c D N Aライブラリ一から取得された c D N Aが完全長のポリぺプ チドをコードしていない場合は、 以下のようにして完全長のポリべプチドをコ一 ドする cDNAを得ることもできる。 If the cDNA obtained from the cDNA library does not encode a full-length polypeptide, a cDNA encoding the full-length polypeptide may be obtained as follows. it can.
各種臓器または各種細胞から調製した一本鎖 c D N Aライブラリーまたは上記 記載の方法で作製できる c DNAライブラリーを銃型にして、 該 c DNAに特異 的なプライマ一セヅトを用いて PCRを行うことにより、 該 cDNAに対'応する 遺伝子を発現する臓器や細胞を特定し、 特定された臓器あるいは細胞由来の cD N-Aラィブラリ一に対し、 該 c D N Aをプローブにしてコロ二一ハイプリダイゼ ーシヨン法 (モレキュラー 'クローニング第 2版) を行うことにより改めて該 c DNAの全長を含むcDNAをcDNAラィブラリ一から選択することができる, 各種臓器または各種細胞由来の一本鎖 c D N Aライブラリ一は、 常法または巿 版されているキッ トに従って作製することができるが、 例えば以下に示す方法で 作製できる。 PCR using a single-stranded cDNA library prepared from various organs or cells or a cDNA library prepared by the above-described method as a gun and using a primer set specific to the cDNA. Thus, an organ or cell that expresses a gene corresponding to the cDNA is identified, and a cDNA library as a probe is used for a cDNA library derived from the identified organ or cell using the cDNA hybridization method (molecular By carrying out the 'cloning second edition', cDNA containing the full length of the cDNA can be newly selected from the cDNA library, A single-stranded cDNA library derived from various organs or cells can be prepared according to a conventional method or a standard kit. For example, it can be prepared by the following method.
各種臓器または各種細胞からグァニジゥム チオシァネート フエノールーク ロロホルム法 〔Anal. Biochem., 162, 156 (1987)〕 により全 R N Aを抽出する。 必要に応じて、 全 R N Aをデォキシリボヌクレァーゼ I (Life Technologies社製 ) で処理し、 混入の可能性がある染色体] DNAを分解する。 得られた全 RNA各 々について、 オリゴ (dT) プライマーまたはランダムプライマ一を用いて SUPERSCRIPT™ Preamplification System for First Strand cDNA System (Life Technologies社製) により、 一本鎖 cDNAライブラリ一を作製できる。 Total RNA is extracted from various organs or cells by the guanidium thiosinate phenol chloroform method [Anal. Biochem., 162, 156 (1987)]. If necessary, treat all RNAs with Deoxyribonuclease I (Life Technologies) to degrade chromosomal DNA that may be contaminated. For each of the obtained total RNAs, a single-stranded cDNA library can be prepared by using the SUPERSCRIPT ™ Preamplification System for First Strand cDNA System (manufactured by Life Technologies) using oligo (dT) primers or random primers.
上記の方法により取得された: D N Aの塩基配列は、 該 D N A断片をそのままあ るいは適当な制限酵素等で切断後常法によりベクターに組み込み、 通常用いられ る塩基配列解析方法、 例えばサンガ一 (Sanger)らのジデォキシ法 〔Proc. Natl. Acad. Sci. USA, 74, 5463 (1977)〕 あるいはパ一キン ·エルマ一社 (Perkin Elmer : 373 A · DNAシ一クェンサ一) 、 フアルマシア社、 ライコア (LI- C0R) 社 等の塩基配列分析装置を用いて分析することにより決定することができる。 The nucleotide sequence of DNA was obtained by digesting the DNA fragment as it is or by using an appropriate restriction enzyme or the like, and incorporating the fragment into a vector by a conventional method. Sanger) et al. [Proc. Natl. Acad. Sci. USA, 74, 5463 (1977)] or Perkin Elmer: 373A DNA Sequencer, Pharmacia, Lycoa It can be determined by analysis using a base sequence analyzer such as (LI-C0R).
上記方法により取得された本発明の D N Aおよびその一部を含むブラスミ ドと して、 例えば、 配列番号 2で表される塩基配列からなる DNAの一部を有するプ ラスミ ド hepl0314、 および配列番号 16で表される塩基配列からなる D N Aの一 部を有するプラスミ ド p23- lk、 p23- 2kをあげることができる。 Examples of the plasmid containing the DNA of the present invention and a part thereof obtained by the above method include, for example, plasmid hepl0314 having a part of the DNA consisting of the base sequence represented by SEQ ID NO: 2, and SEQ ID NO: 16 And plasmids p23-lk and p23-2k having a part of the DNA consisting of the base sequence represented by
プラスミ ド hepl0314を含有する大腸菌 Escherichia coli JM109/hepl0314は、 FERM BP— 6976として、 平成 11年 12月 22日付けで工業技術院生 命工学工業技術研究所、 日本国茨城県つくば巿東 1丁目 1番 3号 (郵便番号 305-8566) に寄託されている。 Escherichia coli JM109 / hepl0314 containing plasmid hepl0314 was designated as FERM BP-6976 as of December 22, 1999 by the Institute of Life Science and Industrial Technology, National Institute of Advanced Industrial Science and Technology. Deposited with No. 3 (zip code 305-8566).
-また、 上記方法で取得した DN Aとストリンジェントな条件下でハイプリダイ ズする DNAを選択することにより、 他の組織あるいは、 他の動物由来、 例えば ヒトおよびマウス由来の目的とする DN Aを取得することができる。 上記方法により得られた塩基配列情報に基づき、 D NA合成機で化学合成する ことにより目的とする D N Aを調製することもできる。 D N A合成機としては、 チォホスフアイ ト法を利用した島津製作所社製の D N A合成機、 ホスホアミダイ ト法を利用したパーキン ·エルマ一社製の D NA合成機 m o d e 1 3 9 2等をあ げることができる。 -Also, by selecting DNA that hybridizes under stringent conditions with the DNA obtained by the above method, the desired DNA derived from other tissues or other animals, such as humans and mice, is obtained. can do. Based on the nucleotide sequence information obtained by the above method, the target DNA can also be prepared by chemical synthesis using a DNA synthesizer. Examples of the DNA synthesizer include a DNA synthesizer manufactured by Shimadzu Corporation using the thiophosphite method, and a DNA synthesizer mode 1392 manufactured by Perkin Elmer Inc. using the phosphoramidite method. it can.
得られた塩基配列の新規性に関しては、 BLAST等の相同性検索プログラムを用い て、 GenBank、 EMBLおよび DDBJ等の塩基配列データベースを検索することにより確 認することができる。 The novelty of the obtained nucleotide sequence can be confirmed by searching a nucleotide sequence database such as GenBank, EMBL and DDBJ using a homology search program such as BLAST.
新規な塩基配列については、 アミノ酸配列に変換したのち F A S T A、 フレ一 ムサ一チ (FrameSearch) 等の相同性検索プログラムを用いて、 GenPept、 PIR、 Swiss- Prot等のァミノ酸配列デ一夕ペースを検索することにより、 相同性をもつ 既存の遺伝子を検索することができる。 After converting the new nucleotide sequence to an amino acid sequence, the homology search programs such as FASTA and FrameSearch (FrameSearch) are used to search for amino acid sequences such as GenPept, PIR and Swiss-Prot. By searching, existing genes with homology can be searched.
( 3 ) 本発明のオリゴヌクレオチドの調製 (3) Preparation of oligonucleotide of the present invention
上述の方法で取得した本発明の D N Aまたは D N A断片を用いて、 常法あるい は上記の D N A合成機により、 本発明の D N Aの一部の配列を有するアンチセン ス ·オリゴヌクレオチド、 センス ·才リゴヌクレオチド等のォリゴヌクレオチド を調製することができる。 Using the DNA or DNA fragment of the present invention obtained by the above-mentioned method, an antisense oligonucleotide having a partial sequence of the DNA of the present invention or a sense Oligonucleotides such as nucleotides can be prepared.
該ォリゴヌクレオチドとしては、 上記 D N Aの有する塩基配列中の連続した 5 〜 6 0塩基と同じ配列を有する D N Aまたは該 D N Aと相補的な配列を有する D NAをあげることができ、 具体的には、 配列番号 2または配列番号 1 6で表され る塩基配列中の連続した 5〜 6 0塩基と同じ配列を有する D N Aまたは該 D N A と相補的な配列を有する D N Aをあげることができる。 センスプライマ一および アンチセンスプライマーとして用いる場合には、 両者の融解温度 (T m) および 塩基数が極 に変わることのない上記のォリゴヌクレオチドが好ましい。 Examples of the oligonucleotide include a DNA having the same sequence as the consecutive 5 to 60 bases in the base sequence of the DNA or a DNA having a sequence complementary to the DNA. A DNA having the same sequence as 5 to 60 consecutive nucleotides in the nucleotide sequence represented by SEQ ID NO: 2 or SEQ ID NO: 16 or a DNA having a sequence complementary to the DNA. When used as a sense primer and an antisense primer, the above-mentioned oligonucleotides whose melting temperature (T m) and number of bases do not extremely change are preferred.
I亥オリゴヌクレオチドとして、 例えば、 配列番号 1 0、 1 1、 1 7または 1 8 で表されるォリゴヌクレオチドをあげることができる。 Examples of I oligonucleotides include the oligonucleotides represented by SEQ ID NOS: 10, 11, 17, or 18.
更に、 これらオリゴヌクレオチドの誘導体 (本明細書中では、 オリゴヌクレオ チド誘導体とも言う) も本発明のォリゴヌクレオチドとして利用することができ る。 Further, derivatives of these oligonucleotides (herein, oligonucleotides Can also be used as the oligonucleotide of the present invention.
該オリゴヌクレオチド誘導体としては、 オリゴヌクレオチド中のリン酸ジエス テル結合がホスホロチォエー卜結合に変換されたオリゴヌクレオチド誘導体、 ォ リゴヌクレオチド中のリン酸ジエステル結合が N 3, - P 5 5 ホスフォアミデ一 ト結合に変換されたオリゴヌクレオチド誘導体、 オリゴヌクレオチド中のリボー スとリン酸ジエステル結合がぺプチド核酸結合に変換されたォ'リゴヌクレオチド 誘導体、 オリゴヌクレオチド中のゥラシルが C一 5プロピニルゥラシルで置換さ れたォリゴヌクレオチド誘導体、 ォリゴヌクレオチド中のゥラシルが C一 5チア ゾ'一ルゥラシルで置換されたォリゴヌクレオチド誘導体、 ォリゴヌクレオチド中 のシトシンが C— 5プロビニルシトシンで置換されたオリゴヌクレオチド誘導体、 オリゴヌクレオチド中のシトシンがフエノキサジン ί多飾シトシン ( Examples of the oligonucleotide derivatives include an oligonucleotide derivative wherein the phosphoric acid Jiesu ether bond in the oligonucleotide is converted to Hosuhorochioe Bok bond, a phosphodiester bond N 3 in O oligo nucleotides, - the P 5 5 Hosufoamide one preparative bond Converted oligonucleotide derivative, oligonucleotide derivative in which ribose and phosphodiester bond in oligonucleotide are converted to peptide nucleic acid bond, peracyl in oligonucleotide substituted with C-15 propynyl peracyl Oligonucleotide derivatives, Oligonucleotide derivatives in which peracyl in the oligonucleotide is substituted by C-15thiazo'-peruracil, Oligonucleotide derivatives in which cytosine in the oligonucleotide is substituted by C-5 provinylcytosine, Oligonucleo Cytosine in soil Fuenokisajin ί Takazari cytosine (
phenoxazine- modified cytosine) で置換されたオリゴヌクレオチド誘導体、 オリ ゴヌクレオチド中のリボースが 2, 一 0—プロピルリボースで置換されたオリゴ ヌクレオチド誘導体、 あるいはオリゴヌクレオチド中のリボースが 2 ' ーメトキ シェトキシリボースで置換されたォリゴヌクレオチド誘導体等をあげることがで きる 〔細胞工学, 16, 1463 (1997)〕 。 Oligonucleotide derivatives substituted with phenoxazine-modified cytosine), oligonucleotide derivatives in which the ribose in the oligonucleotide has been substituted with 2,10-propylribose, or ribose in the oligonucleotide has been substituted with 2′-methoxetoxyribose Oligonucleotide derivatives, etc. [Cell Engineering, 16, 1463 (1997)].
[ 2 ] 本発明のポリぺプチドの調製 [2] Preparation of polypeptide of the present invention
( 1 ) 形質転換体の作製 (1) Preparation of transformant
上記 [ 1 ] に記載の方法により取得した本発明の: D NAを宿主細胞中で発現さ せ、 本発明のポリペプチドを製造するために、 モレキュラー ·クロ一ニング第 2 版、 カレント ·プロトコル 'イン 'モレキユラ ·バイオロジー等に記載された方 法を用いることができる。 In order to express the DNA of the present invention obtained by the method described in the above [1] in a host cell and produce the polypeptide of the present invention, Molecular Cloning Second Edition, Current Protocol The method described in “Molecular biology” can be used.
即ち、 本発明の D N Aを適当な発現ベクターのプロモー夕一下流に挿入した組 換えベクターを造成し、 該ベクターを宿主細胞に導入することにより、 本発明の ポリべプチドを発現する形質転換体を取得し、 該形質転換体を培養することによ り、 本発明のポリペプチドを製造することができる。 宿主細胞としては、 微生物 (細菌、 酵母等) 、 動物細胞、 昆虫細胞、 植物細胞 等、 目的とする遺伝子を発現できるものであればいずれも用いることができる。 発現べク夕一としては、 上記宿主細胞において自立複製可能な ^しは染色体中 への組込が可能で、 本発明の DN Aを転写できる位置にプロモーターを含有して いるものが用いられる。 That is, a recombinant vector expressing the polypeptide of the present invention is obtained by constructing a recombinant vector in which the DNA of the present invention is inserted downstream of an appropriate expression vector, and introducing the vector into a host cell. The polypeptide of the present invention can be produced by obtaining and culturing the transformant. As the host cells, any microorganisms (bacteria, yeast, etc.), animal cells, insect cells, plant cells, etc., can be used as long as they can express the gene of interest. As the expression vector, a vector capable of autonomously replicating in the above-mentioned host cell, capable of being integrated into a chromosome, and containing a promoter at a position capable of transcribing the DNA of the present invention is used.
細菌等の原核生物を宿主細胞として用いる場合、 本発明のポリべプチド遺伝子 発現べクタ一は原核生物中で自立複製可能であると同時に、 プロモーター、 リボ ソ一ム結合配列、 本発明の DN A及び転写終結配列より構成された組換えべクタ 一であることが好ましい。プロモ一夕一を制御する遺伝子が含まれていてもよい。 発現べクタ一としては、 例えば、 pB.Trp2、 pBTa c Is pBT a c 2 (いずれもベーリンガーマンハイム社より市販)、 PKK233- 2 (フアルマシア社)、 PSE280 (インビトロジヱン社) 、 pGE EX-Ι〔プロメガ (Promega)社〕 、 QE-8 (キ ァゲン(QIAGEN)社)、 pKYPIO (特開昭 58- U0600)、 pKYP200 (Agric. Biol. Chem. , 8, 669 (1984)〕 、 pLSAl CAgric. Biol. Chem. , 53, 277 (1989)〕 、 pGELl 〔Pro Natl. Acad. Sci. USA, 82, 4306 (1985))、 pBluescript II SK (-) (ストラタ ジ一ン社) 、 pTrs32 (FERM BP— 5408) 、 pGHA2 (FER M BP-400) N pGKA2 (FERM BP- 6798) s pT e rm2 (特開平 3— 22979、 US4686191. US 4939094S US 51 60735)、 pGEX (フアルマシア社) 、 pET-3 (ノバジェン社) 、 p S u p e x 、 pUB 110, pTP 5 pC194、 p T r xFu s (Inv 零 n社)、 p MAL-c 2 (New England Biolabs社) 等を挙げることができる。 When a prokaryote such as a bacterium is used as a host cell, the polypeptide gene expression vector of the present invention is capable of autonomous replication in a prokaryote and has a promoter, a ribosome binding sequence, and a DNA of the present invention. And a recombination vector comprising a transcription termination sequence. A gene that controls the promoter overnight may be included. Examples of expression vectors include pB.Trp2, pBTAc Is pBTac2 (both commercially available from Boehringer Mannheim), PKK233-2 (Pharmacia), PSE280 (Invitrogen), pGEEX-Ι [Promega ( Promega), QE-8 (QIAGEN), pKYPIO (JP-A-58-U0600), pKYP200 (Agric. Biol. Chem., 8, 669 (1984)), pLSAl CAgric. Biol. Chem. , 53, 277 (1989)), pGELl [Pro Natl. Acad. Sci. USA, 82, 4306 (1985)), pBluescript II SK (-) (Stratagene), pTrs32 (FERM BP-5408) , PGHA2 (FER M BP-400) N pGKA2 (FERM BP-6798) s pT e rm2 (JP-A-3-22979, US4686191.US4939094 S US51 60735), pGEX (Pharmacia), pET-3 (Novagen) ), PSupex, pUB110, pTP5pC194, pTrxFus (Inv Zeron), pMAL-c2 (New England Biolabs), and the like.
プロモー夕—としては、 大腸菌や枯草菌等の宿主細胞中で発現できるものであ ればいかなるものでもよい。例えば、 ii卫プロモ一夕一 (Pii卫) 、 lacプロモ一夕 一 (Plac)、 PLプロモーター、 プロモ一夕一、 T7プロモ一夕一等の、 大腸菌 やファージ等に由来するプロモ一夕一、 SP 01プロモーター、 SP02プロモ 一夕一、 p enPプロモ一夕一等をあげることができる。また Ptrpを 2つ直列さ せたプロモー夕一 (Pi|卫 x2)、 tacプロモ一夕一、 lacT7プロモー夕一、 let I プロモ一夕一のように人為的に設計改変されたプロモ一夕一等も用いることがで きる。 The promoter may be any promoter that can be expressed in host cells such as Escherichia coli and Bacillus subtilis. For example, promoters derived from Escherichia coli or phage, such as ii 卫 promoter overnight (Pii 卫), lac promoter overnight (Plac), P L promoter, promoter overnight, T7 promoter overnight, etc. , SP01 Promoter, SP02 Promo Overnight, penP Promo Overnight, etc. In addition, the promotion of two Ptrps in series (Pi | 卫 x2), the promotion of tac promotion, the promotion of lacT7 promotion, let I It is also possible to use an artificially designed and modified Promo One Night, such as the One Night Promo.
リポソ一ム結合配列としては、 シャインーダルガノ ( Shine- Dalgarno) 配列と 開始コドンとの間を適当な距離 (例えば 6〜1 8塩基) に調節したプラスミ ドを 用いることが好ましい。 As the liposome binding sequence, it is preferable to use a plasmid in which the distance between the Shine-Dalgarno sequence and the initiation codon is adjusted to an appropriate distance (for example, 6 to 18 bases).
本発明の D N Aの発現には転写終結配列は必ずしも必要ではないが、 構造遺伝 子の直下.に転写終結配列を配置することが好ましい。 Although the transcription termination sequence is not necessarily required for the expression of the DNA of the present invention, it is preferable to arrange the transcription termination sequence immediately below the structural gene.
宿主細胞としては、 ェシエリヒア属、 セラチア属、 バチルス属、 ブレビバクテ リウム属、 コリネバクテリウム属、 ミクロバクテリウム属、 シユードモナス属等 に属する微生物、例えば、 Escherichia coli XL1-Blues Escherichia coli XL2-Blue 、 Escherichia coli應ヽ Escherichia coli MC1000S Escherichia coli KY3276、 Escherichia coli W1485、 Escherichia coli JM109、 Escherichia coli HB101、 Escherichia coli No.49、 Escherichia coli W3110、 Escherichia coli NY49、 Serratia ficariaヽ Serratia fonticola、 Serratia Iiguefacienss Serratia marc6sc6ns、 Bacillus subtil is、 Bacillus amyloliquefaciens^ Brevibacterium ammoniagenesess Brevibacterium immariophilum ATCC14068、 Brevibacterium saccharolyticum AT.CC14066、 Corynebacterium glutamicmn ATCC13032、 The host cell, Eshierihia, Serratia, Bacillus, Burebibakute genus, Corynebacterium, the genus Microbacterium, microorganisms belonging to Shiyudomonasu genus like, for example, Escherichia coli XL1-Blue s Escherichia coli XL2-Blue, Escherichia coli KeioヽEscherichia coli MC1000 S Escherichia coli KY3276, Escherichia coli W1485, Escherichia coli JM109, Escherichia coli HB101, Escherichia coli No.49, Escherichia coli W3110, Escherichia coli NY49, Serratia ficariaヽSerratia fonticola, Serratia Iiguefaciens s Serratia marc6sc6ns , Bacillus subtil is, Bacillus amyloliquefaciens ^ Brevibacterium ammoniagenesess Brevibacterium immariophilum ATCC14068, Brevibacterium saccharolyticum AT.CC14066, Corynebacterium glutamicmn ATCC13032,
Corynebacterium glutamicmn ATCC14Q67S Corynebacterium glutamicum ATCC13869 、 Corynebacterium acetoacidophilum ATGC1387QN Microbacterium ammoniaphilum ATCC15354, Pseudomonas sp. D- 0110等をあげることができる。 Corynebacterium glutamicmn ATCC14Q67 S Corynebacterium glutamicum ATCC13869, Corynebacterium acetoacidophilum ATGC1387Q N Microbacterium ammoniaphilum ATCC15354, Pseudomonas sp. D- 0110 , or the like can be mentioned.
組換えベクターの導入方法としては、 上記宿主細胞へ D N Aを導入する方法で あればいずれも用いることができ、例えば、力ルシゥムイオンを用いる方法〔Proc . Natl. Acad. Sci . USA, 69, 2110 (1972)〕 、 プロトプラスト法 (特開昭 63- 248394 ) 、 エレクトロポレーシヨン法 〔Gene, 17, 107 (1982)、 Molecular & General Genetics, 168, ill (1979)〕 等を挙げることができる。 Any method for introducing a recombinant vector can be used as long as it is a method for introducing DNA into the above host cells, for example, a method using lucidium ion [Proc. Natl. Acad. Sci. USA, 69, 2110 ( 1972)], protoplast method (JP-A-63-248394), electroporation method [Gene, 17, 107 (1982), Molecular & General Genetics, 168, ill (1979)].
酵母菌株を宿主細胞として用いる場合には、発現べクタ一として、例えば、 YEpl3 (ATCC37115) 、 YEp24 (ATCC37051) 、 YCp50 (ATCC37419) 、 pHS19、 pHS15等を用 いることができる。 When a yeast strain is used as a host cell, for example, YEpl3 (ATCC37115), YEp24 (ATCC37051), YCp50 (ATCC37419), pHS19, pHS15, etc. are used as expression vectors. Can be.
プロモ一夕一としては、 酵母菌株中で発現できるものであればいずれのものを 用いてもよく、例えば、 PH05プロモー夕一、 PGKプロモー夕一、 GAPプロモ一夕一、 ADHプロモ一夕一、 gal 1プロモー夕一、 gal 10プロモーター、 ヒ一トショヅクポ リペプチドプロモ一夕一、 MFひ 1プロモ一夕一、 CUP 1プロモ一夕一等のプロモー 夕一を挙げることができる。 Any promoter can be used as long as it can be expressed in yeast strains, such as PH05 Promo, PGK Promo, GAP Promo, ADH Promo, Promoters such as gal 1 promoter, gal 10 promoter, heat shock polypeptide promoter, MF 1 promoter, CUP 1 promoter, etc.
宿主細胞としては、 サッカロマイセス属、 シゾサヅカロマイセス属、 クルイべ 口ミセス属、 トリコスポロン属、 シヮニォミセス属等に属する酵母菌株をあげる こ匕力 sでき、具体的には、 Saccharomyces cerevisiaes Schizosaccharomyces pombe 、 Kluyveromyces iactiss Trichosporon puliulans、 Schwaimiomyces alluviuss Pichia pastor is等をあげることができる。 As the host cell, Saccharomyces, Schizosaccharomyces support steward Russia My genus, Kuruibe opening Mrs. genus Trichosporon, can this匕力s raise the yeast strain belonging to the genus Shiwaniomisesu such as, specifically, Saccharomyces cerevisiae s Schizosaccharomyces pombe, Kluyveromyces iactis s Trichosporon puliulans, Schwaimiomyces alluvius s Pichia pastor is, and the like.
組換えベクターの導入方法としては、 酵母に DN Aを導入する方法であればい ずれも用いることができ、 例えば、 エレクト口ポレーシヨン法 Qiethods in Enzymology, 194, 182 (1990)〕 、 スフエロプラスト法 〔Proc. Natl. Acad. Sci. USA, 81, 4889 (1984)〕 、 酢酸リチウム法 Journal of Bacteriology, 153, 163 (1983)〕 等をあげることができる。 As a method for introducing a recombinant vector, any method can be used as long as it is a method for introducing DNA into yeast, and examples thereof include an electoporation method, Qiethods in Enzymology, 194, 182 (1990)) and a spheroplast method [ Proc. Natl. Acad. Sci. USA, 81, 4889 (1984)] and the lithium acetate method Journal of Bacteriology, 153, 163 (1983)].
動物細胞を宿主として用いる場合には、 発現べクタ一として、 例えば、 p cD NA I/Amp (インビトロジェン社製)、 p cDNAI、 p CDM8 (Nature, 329, 840 (1987)〕 、 pAGE 107 〔特開平 3 - 22979、 Cytotechnology, 3, 133 (1990)〕 、 pREP4 (インビトロジェン社製) 、 pAGE 103 (Journal of Biochemistry, 101, 1307 (1987)〕 、 pAMo、 pAMoA、 p AS 3— 3 (特 開平 2- 227075) 等が用いられる。 When an animal cell is used as a host, expression vectors such as pcDNA I / Amp (manufactured by Invitrogen), pcDNAI, pCDM8 (Nature, 329, 840 (1987)), pAGE107 [ Kaihei 3-22979, Cytotechnology, 3, 133 (1990)], pREP4 (Invitrogen), pAGE 103 (Journal of Biochemistry, 101, 1307 (1987)), pAMo, pAMoA, pAS3-3 (Special Kaihei 2) -227075) is used.
プロモ一夕一としては、 動物細胞中で発現できるものであればいずれも用いる ことができ、 例えば、 サイ トメガロウィルス (CMV) の IE (i扁 ediate early) 遺 伝-子のプロモ一夕一、 SV40の初期プロモーターあるいはメタロチォネィンのプロ モ一夕一、 レトロウイルスのプロモ一夕一、 ヒートショックプロモーター、 SR ひプロモ一夕一等をあげることができる。また、 ト CMVの IE遺伝子のェンハンサ 一をプロモ一夕一と共に用いてもよい。 Any promoter can be used as long as it can be expressed in animal cells. For example, the promoter of the IE (i-ediate early) gene of cytomegalovirus (CMV) can be used. , SV40 early promoter or metallothinin promoter, retrovirus promoter, heat shock promoter, SR hypromo, etc. Also, Enhansa of the IE gene of CMV One may be used with the Promo All Night.
動物細胞としては、 マウス · ミエ口一マ細胞、 ラヅ ト ' ミエ口一マ細胞、 マウ ス 'ハイプリ ド一マ細胞、ヒトの細胞であるナマルバ (Namalwa)細胞または femalwa KJM - 1細胞 CCytotechnology, 13 151 (1988)〕 、 ヒト胎児腎臓細胞、 ヒト白血病 細胞、 アフリカミ ドリザル腎臓細胞、 チャイニーズハムスターの細胞である CH0 細胞、 HBT5637 (特開昭 63- 299) 等をあげることができる。 Examples of animal cells include mouse and mouse cells, rat's mouse cells, mouse 'hybrid cells, and human cells such as Namalwa cells or femalwa KJM-1 cells CCytotechnology, 1 3 151 (1988)], can be mentioned the human embryonic kidney cells, human leukemia cells, Afurikami Dorizaru kidney cells, CH0 cells is a cell of Chinese hamster, and HBT5637 (JP 63- 299) or the like.
マウス · ミエ口一マ細胞としては、 SP2/0、 NS0等、 ラヅト ' ミエ口一マ細胞と しては YB2/0等、 ヒト胎児腎臓細胞としては HEK293(ATCC: CRL- 1573)等、 ヒト白血 病細胞としては、 BALL- 1等、 アフリカミドリザル腎臓細胞としては COS- 1、 COS - 7 等をあげることができる。 Mouse / myeloid cells include SP2 / 0, NS0, etc., Rat'myeloid cells, YB2 / 0, etc., and human embryonic kidney cells, such as HEK293 (ATCC: CRL-1573), human Examples of leukemia cells include BALL-1 and examples of African green monkey kidney cells include COS-1 and COS-7.
組換えベクターの導入方法としては、 動物細胞に D NAを導入する方法であれ ばいずれも用いることができ、 例えば、 エレクト口ポレーシヨン法 〔 As a method for introducing a recombinant vector, any method for introducing DNA into animal cells can be used.
Cytotechnology, 3, 133 (譲)〕、 リン酸カルシウム法 (特閧平 2- 227075) 、 リ ポフエクシヨン法 CProc. Natl. Acad. Sci. USA, 84, 7413 (1987)〕、 Virology, 52, 456 (1973)に記載の方法等をあげることができる。 Cytotechnology, 3, 133 (assigned)], calcium phosphate method (Japanese Patent Publication No. 2-227075), lipofection method CProc. Natl. Acad. Sci. USA, 84, 7413 (1987)), Virology, 52, 456 (1973) And the like.
昆虫細胞を宿主として用いる場合には、 例えばバキュロウィルス 'イクスプレ ヅシヨン 'ぺク夕一ズ ·ァ ·ラボラトリー-マニュアル〔Baculovirus Expression Vectors, A Laboratory Manual, . H. Freeman and Company, New York (1992) 〕、モレキュラー 'バイォロジ一'ァ 'ラボラトリー'マニュアル(Molecular Biology, A Laboratory Manual) 、 カレント ' プロ トコ一ルズ ' イン ·モレキュラー■ノ イ ォロジ一、 Bio/Technology, 65 47 (1988)等に記載された方法によって、 ポリべ プチドを発現することができる 9 When insect cells are used as hosts, for example, Baculovirus Expression Vectors, A Laboratory Manual, .H. Freeman and Company, New York (1992) , Molecular 'Baioroji one' § 'Laboratory' manual (Molecular Biology, a Laboratory manual) , is described in the current 'pro Toco one Luz' in Molecular ■ Bruno Lee Oroji one, Bio / Technology, 6 5 47 (1988) , etc. the methods, it is possible to express Poribe peptide 9
即ち、 組換え遺伝子導入べクタ一およびバキュロウィルスを毘虫細胞に共導入 して昆虫細胞培養上清中に組換えウィルスを得た後、 さらに組換えウィルスを昆 虫細胞に感染させ、 .ポリぺプチドを発現させることができる。 ' That is, the recombinant gene transfer vector and the baculovirus were co-transfected into bizoa cells to obtain the recombinant virus in the insect cell culture supernatant, and then the recombinant virus was infected to the insect cells, and Peptides can be expressed. '
該方法において用いられる遺伝子導入べクタ一としては、 例えば、 pVL1392、 pVL1393、 pBlueBacIII (ともにインビトロジェン社製)等をあげることができる。 バキュロウィルスとしては、 例えば、 夜盗蛾科昆虫に感染するウィルスである ァゥトグラファ '力リフォルニ力 ·ヌクレア一 ·ポリへドロシス ·ウィルスExamples of the gene transfer vector used in the method include pVL1392, pVL1393, pBlueBacIII (all manufactured by Invitrogen) and the like. Examples of baculoviruses are viruses that infect night roth moths, such as Atographa's force, Reformi force, Nuclea, polyhedrosis, and virus.
(Autographa caiiforaica nuclear polyhedrosis virus) 等を用レヽること力 sでき る。 Ru can (Autographa caiiforaica nuclear polyhedrosis virus) Rereru that the force s use and the like.
昆虫細胞としては、 Spodoptera frugiperdaの卵巣細胞、 Trichoplusia niの卵 巣細胞、 カイコ卵巣由来の培養細胞等を用いることができる。 As the insect cells, ovary cells of Spodoptera frugiperda, ovary cells of Trichoplusia ni, cultured cells derived from silkworm ovary, and the like can be used.
Spodoptera frugiperdaの卵巣細胞としては Sf9、 Sf21 (バキュロウィルス 'ィ クスプレヅシヨン ·ベクタ一ズ'ァ 'ラボラトリー'マニュアル)等、 Trichoplusia illの卵巣細胞としては High 5、 BTI-TN-5B1-4 (インビトロジェン社製) 等、 カイ コ卵巣由来の培養細胞としては Bombyx mori M等をあげることができる。 Spodoptera frugiperda ovary cells include Sf9 and Sf21 (baculovirus' Expression Vectors' Laboratory 'manual), etc. Bombyx mori M and the like can be mentioned as cultured cells derived from silkworm ovaries.
組換えゥィルスを調製するための、 昆虫細胞への上記組換え遺伝子導入べク夕 一と上記バキュロウィルスの共導入方法としては、 例えば、 リン酸カルシウム法 Co-transfection of the above-described recombinant gene transfer vector and the above baculovirus into insect cells for preparing a recombinant virus includes, for example, a calcium phosphate method.
(特開平 2- 227075)、 リポフエクシヨン法 CProc. Natl . Acad. Sci . USA, 8 , 7413 ( 1987)〕 等をあげることができる。 (Japanese Unexamined Patent Publication (Kokai) No. 2-227075), Lipofxion method CProc. Natl. Acad. Sci. USA, 8, 7413 (1987)].
遺伝子の発現方法としては、 直接発現以外に、 モレキュラー 'クローニング第 2版に記載されている方法等に準じて、 分泌生産、 融合蛋白質発現等を行うこと ができる。 As a method for expressing a gene, in addition to direct expression, secretory production, fusion protein expression, and the like can be performed according to the method described in Molecular 'Cloning, 2nd edition.
酵母、 動物細胞または昆虫細胞により発現させた場合には、 糖あるいは糖鎖が 付加されたポリペプチドを得ることができる。 When expressed by yeast, animal cells or insect cells, a sugar or sugar chain-added polypeptide can be obtained.
以上のようにして得られる形質転換体を培地に培養し、 ±咅養物中に本発明のポ リペプチドを生成蓄積させ、 該培養物から採取することにより、 本発明のポリべ プチドを製造することができる。 The polypeptide of the present invention is produced by culturing the transformant obtained as described above in a medium, producing and accumulating the polypeptide of the present invention in a culture, and collecting the polypeptide from the culture. be able to.
また、 患者の生体内から採取した細胞に、 適切な本発明のポリペプチドを発現 させるための発現ぺク夕一を導入した後、 細胞を生体内に戻すことにより、 本発 明-のポリぺプチドを患者の生体内で発現させることもできる。 In addition, after introducing an appropriate expression vector for expressing the polypeptide of the present invention into cells collected from a patient's living body, the cells are returned to the living body, thereby obtaining the polypeptide of the present invention. The peptide can also be expressed in a patient's body.
( 2 ) 形質転換体の培養 (2) Culture of transformants
本発明の形質転換体を培地に培養する方法は、 宿主の培養に用いられる通常の 方法に従って行うことができる。 The method of culturing the transformant of the present invention in a culture medium can be performed by a conventional method for culturing a host It can be done according to the method.
大腸菌等の原核生物あるいは酵母等の真核生物を宿主として得られた形質転換 体を培養する培地としては、 該生物が資化し得る炭素源、 窒素源、 無機塩類等を 含有し、 形質転換体の培養を効率的に行える培地であれば天然培地、 合成培地の いずれを用いてもよい。 A culture medium for culturing a transformant obtained by using a prokaryote such as Escherichia coli or a eukaryote such as yeast as a host contains a carbon source, a nitrogen source, inorganic salts, and the like which can be used by the organism. Either a natural medium or a synthetic medium can be used as long as the medium can be efficiently cultured.
炭素源としては、 該生物が資化し得るものであればよく、 グルコース、 フラク ト一ス、 スクロース、 これらを含有する糖蜜、 デンプンあるいはデンプン加水分 解物等の炭水化物、 酢酸、 プロピオン酸等の有機酸、 エタノール、 プロパノール 等のアルコール類等を用いることができる。 The carbon source may be any one that can be assimilated by the organism, such as glucose, fructose, sucrose, molasses containing these, carbohydrates such as starch or starch hydrolysate, and organic acids such as acetic acid and propionic acid. Acids, alcohols such as ethanol and propanol and the like can be used.
窒素源としては、 アンモニア、 塩化アンモニゥム、 硫酸アンモニゥム、 酢酸ァ ンモニゥム、 リン酸アンモニゥム等の無機酸もしくは有機酸のアンモニゥム塩、 その他の含窒素化合物、 並びに、 ペプトン、 肉エキス、 酵母エキス、 コーンスチ 一プリカ一、 カゼイン加水分解物、 大豆粕および大豆粕加水分解物、 各種発酵菌 体、 およびその消化物等を用いることができる。 Nitrogen sources include ammonia, ammonium chloride, ammonium sulfate, ammonium acetate, ammonium phosphate, and other ammonium or inorganic salts of organic acids, other nitrogen-containing compounds, and peptone, meat extract, yeast extract, and corn starch. 1. Casein hydrolyzate, soybean meal and soybean meal hydrolyzate, various fermented cells, digested products thereof, and the like can be used.
無機塩としては、 リン酸第一カリウム、 リン酸第二カリウム、 リン酸マグネシ ゥム、硫酸マグネシウム、塩化ナトリウム、硫酸第一鉄、硫酸マンガン、硫酸銅、 炭酸カルシウム等を用いることができる。 As the inorganic salt, potassium phosphate monobasic, potassium phosphate dibasic, magnesium phosphate, magnesium sulfate, sodium chloride, ferrous sulfate, manganese sulfate, copper sulfate, calcium carbonate and the like can be used.
培養は、 通常振盪培養または深部通気攪拌培養等の好気的条件下で行う。 培養 温度は 1 5〜4 0 °Cがよく、 培養時間は、 通常 1 6〜9 6時間である。 培養中 p Hは 3 . 0〜9 . 0に保持する。 p Hの調整は、 無機または有機の酸、 アルカリ 溶液、 尿素、 炭酸カルシウム、 アンモニア等を用いて行う。 The cultivation is usually carried out under aerobic conditions such as shaking culture or deep aeration stirring culture. The culturing temperature is preferably 15 to 40 ° C, and the culturing time is usually 16 to 96 hours. During the culture, the pH is maintained at 3.0 to 9.0. The pH is adjusted using an inorganic or organic acid, an alkaline solution, urea, calcium carbonate, ammonia, or the like.
また、 培養中必要に応じて、 アンピシリンやテトラサイクリン等の抗生物質を 培地に添加してもよい。 If necessary, an antibiotic such as ampicillin or tetracycline may be added to the medium during the culture.
プロモ一夕一として誘導性のプロモー夕一を用いた発現べク夕一で形質転換し た微生物を培養するときには、 必要に応じてィンデュ一サ一を培地に添加しても よい。例えば、 プロモーターを用いた発現ベクターで形質転換した微生物を培 養するときにはィソプロピル一/?— D—チォガラクトピラノシド等を、; ^プロモ —夕一を用いた発現ベクターで形質転換した微生物を培養するときにはィンドー ルァクリル酸等を培地に添加してもよい。 When culturing a microorganism transformed in an expression vector using an inducible promoter as the promoter, an indicator may be added to the medium, if necessary. For example, when culturing a microorganism transformed with an expression vector using a promoter, isopropyl-1 /?-D-thiogalactopyranoside or the like is used; —When culturing a microorganism transformed with an expression vector using Yuzuichi, indoleacrylic acid or the like may be added to the medium.
動物細胞を宿主として得られた形質転換体を培養する培地としては、 一般に使 用されている RPMI1640培地 〔The Journal of the American Medical Association, 199, 519 (1967)〕、 Eagleの MEM培地 〔Science, 122, 501 ( 1952)〕、 DMEM培地 〔 Virology, §, 396 (1959)〕、 199培地 (Proceeding of the Society for the Biological Medicine, 73, 1 ( 1950)〕 またはこれら培地に牛胎児血清等を添加し た培地等を用いることができる。 As a medium for culturing the transformant obtained using animal cells as a host, commonly used RPMI1640 medium [The Journal of the American Medical Association, 199, 519 (1967)], Eagle's MEM medium [Science, 122, 501 (1952)), DMEM medium (Virology, §, 396 (1959)), 199 medium (Proceeding of the Society for the Biological Medicine, 73, 1 (1950)), or fetal calf serum etc. A used medium or the like can be used.
培養は、 通常 p H 6〜8、 3 0 - 4 0 °C 5 % C 0 2存在下等の条件下で 1〜 7日間行う。 Culture is usually p H 6~8, 3 0 - performing 4 0 ° C 5% C 0 2 under the conditions such as the presence 1-7 days.
また、 培養中必要に応じて、 カナマイシン、 ペニシリン、 ストレプトマイシン 等の抗生物質を培地に添加してもよい。 If necessary, an antibiotic such as kanamycin, penicillin, streptomycin or the like may be added to the medium during the culture.
昆虫細胞を宿主として得られた形質転換体を培養する培地としては、 一般に使 用されている TNM- ΙΉ培地〔ファーミンジェン(Pharmingen)社製〕、 Sf- 900 I I SFM 培地 (ライフ■テクノロジ一ズ社製)、 ExCell400、 ExCell405 〔いずれも JRHバイ ォサイエンシーズ (JRH Biosciences) 社製〕 、 Grace' s Insect Medium (Nature, 195, 788 (1962)〕 等を用いることができる。 As a medium for culturing the transformant obtained using insect cells as a host, commonly used TNM-II medium (Pharmingen), Sf-900 II SFM medium (Life Technologies Inc.) ExCell400, ExCell405 (all manufactured by JRH Biosciences), Grace's Insect Medium (Nature, 195, 788 (1962)) and the like.
培養は、 通常 p H 6 ~ 7、 2 5〜3 0 °C等の条件下で 1〜5日間行う。 The cultivation is usually performed under conditions of pH 6 to 7, 25 to 30 ° C. for 1 to 5 days.
また、 培養中必要に応じて、 ゲン夕マイシン等の抗生物質を培地に添加しても よい。 If necessary, an antibiotic such as genyumycin may be added to the medium during the culture.
( 3 ) 発現させたポリペプチドの単離精製 (3) Isolation and purification of expressed polypeptide
上記形質転換体の培養液から、 上記方法により発現させたポリぺプチドを単離 精製するためには、 通常の酵素の単離、 精製法を用いればよい。 In order to isolate and purify the polypeptide expressed by the above-mentioned method from the culture of the above-mentioned transformant, an ordinary enzyme isolation and purification method may be used.
例えば、 本発明のポリペプチドが、 細胞内に溶解状態で発現した場合には、 培 養終了後、 細胞を遠心分離により回収し水系緩衝液に懸濁後、 超音波破碎機、 フ レンチプレス、 マントンガウリンホモゲナイザ一、 ダイノミル等により細胞を破 碎し、 無細胞抽出液を得る。 該無細胞抽出液を遠心分離することにより得られた上清から、 通常の酵素の単 離精製法、 即ち、 溶媒抽出法、 硫安等による塩析法、 脱塩法、 有機溶媒による沈 殿法、 ジェチルアミノエチル (DEAE) —セファロース、 DIAION HPA- 75 (三菱化学 社製) 等のレジンを用いた陰イオン交換クロマトグラフィー法、 S- Sepharose FF (フアルマシア社製) 等のレジンを用いた陽イオン交換クロマトグラフィー法、 プチルセファロ一ス、 フエ二ルセファロ一ス等のレジンを用いた疎水性クロマト グラフィ一法、 分子篩を用いたゲルろ過法、 ァフィ二ティ一クロマトグラフィー 法、 クロマトフォーカシング法、 等電点電気泳動等の電気泳動法等の手法を単独 あるいは組み合わせて用い、 精製標品を得ることができる。 For example, when the polypeptide of the present invention is expressed in a dissolved state in a cell, after completion of the culture, the cell is collected by centrifugation, suspended in an aqueous buffer, and then subjected to an ultrasonic homogenizer, a French press, The cells are disrupted with a Manton Gaurin homogenizer, Dynomill, etc. to obtain a cell-free extract. From the supernatant obtained by centrifuging the cell-free extract, an ordinary enzyme isolation and purification method, that is, a solvent extraction method, a salting out method using ammonium sulfate, a desalting method, and a precipitation method using an organic solvent , Getylaminoethyl (DEAE)-Sepharose, anion exchange chromatography using a resin such as DIAION HPA-75 (manufactured by Mitsubishi Chemical Corporation), and a positive electrode using a resin such as S-Sepharose FF (manufactured by Pharmacia) Ion exchange chromatography, hydrophobic chromatography using resins such as butyl sepharose and phenylsepharose, gel filtration using molecular sieves, affinity chromatography, chromatofocusing, etc. A purified sample can be obtained by using techniques such as electrophoresis such as electrofocusing alone or in combination.
また、 該ポリペプチドが細胞内に不溶体を形成して発現した場合は、 同様に細 胞を回収後破砕し、 遠心分離を行うことにより得られた沈殿画分より、 通常の方 法により該ポリべプチドを回収後、 該ポリべプチドの不溶体を蛋白質変性剤で可 溶化する。 When the polypeptide is expressed by forming an insoluble substance in the cells, the cells are similarly recovered, crushed, and centrifuged. After recovering the polypeptide, the insoluble form of the polypeptide is solubilized with a protein denaturant.
該可溶化液を、 蛋白質変性剤を含まない溶液あるいは蛋白質変性剤の濃度が蛋 白質が変性しない程度に希薄な溶液に希釈あるいは透析し、 該ポリべプチドを正 常な立体構造に構成させた後、 上記と同様の単離精製法により精製標品を得るこ とができる。 The solubilized solution was diluted or dialyzed into a solution containing no protein denaturing agent or a solution in which the concentration of the protein denaturing agent was so low that the protein was not denatured, to form the polypeptide into a normal three-dimensional structure. Thereafter, a purified sample can be obtained by the same isolation and purification method as described above.
本発明のポリぺプチドあるいはその糖鎖修飾体等の誘導体が細胞外に分泌され た場合には、 培養上清に該ポリべプチドあるいはその糖鎖付加体等の誘導体を回 収することができる。 When the polypeptide of the present invention or a derivative such as a modified sugar chain thereof is secreted extracellularly, the polypeptide or the derivative such as a glycosylated product thereof can be recovered in the culture supernatant. .
即ち、 該培養物を上記と同様の遠心分離等の手法により処理することにより可 溶性画分を取得し、 該可溶性画分から、 上記と同様の単離精製法を用いることに より、 精製標品を得ることができる。 That is, a soluble fraction is obtained by treating the culture by a method such as centrifugation as described above, and a purified sample is obtained from the soluble fraction by using the same isolation and purification method as described above. Can be obtained.
また、 本発明のポリペプチドを他のタンパク質との融合タンパク質として生産 し、 融合したタンパク質に親和性をもつ物質を用いたァフィ二ティ一クロマトグ ラフィーを利用して精製することもできる。例えば、 ロウらの方法〔Proc . Natl . Acad. Sci . USA, 865 8227 ( 1989)、 Genes & Dev. , 4, 1288 (1990) 〕 、 特開平 05 - 336963、 W094/23021に記載の方法に準じて、本発明のポリべプチドをプロティ ン Aとの融合タンパク質として生産し、 ィムノグロプリン Gを用いるァフィニテ ィ一クロマトグラフィーにより精製することができる。 また、 本発明のポリぺプ チドを F 1 a gペプチドとの融合タンパク質として生産し、 抗 F 1 a g抗体を用 いるァフィ二ティ一クロマトグラフィ一により精製することができる 〔Proc. Natl. Acad. Sci . USA, 86, 8227 ( 1989)、 Genes & Dev. , A, 1288 (1990)〕 。 更に、 該ポリぺプチドに対する抗体を用いたァフィ二ティ一クロマトグラフィー で精製することもできる。 Alternatively, the polypeptide of the present invention can be produced as a fusion protein with another protein, and purified using affinity chromatography using a substance having affinity for the fused protein. For example, the method of Roura [Proc. Natl. Acad. Sci. USA, 86 5 8227 (1989), Genes & Dev., 4, 1288 (1990) ], JP-A The polypeptide of the present invention can be produced as a fusion protein with protein A according to the method described in 05-336963, W094 / 23021, and can be purified by affinity chromatography using immunoglobulin G. Further, the polypeptide of the present invention can be produced as a fusion protein with an F1ag peptide and purified by affinity chromatography using an anti-F1ag antibody [Proc. Natl. Acad. Sci. USA, 86, 8227 (1989), Genes & Dev., A, 1288 (1990)]. Furthermore, it can be purified by affinity chromatography using an antibody against the polypeptide.
更に、 本発明のポリペプチドは、 F m o c法 (フルォレニルメチルォキシカル ボニル法) 、 t B 0 c法 (t一ブチルォキシカルボニル法) 等の化学合成法によ つても製造することができる。 Furthermore, the polypeptide of the present invention can also be produced by chemical synthesis methods such as the Fmoc method (fluorenylmethyloxycarbonyl method) and the tB0c method (t-butyloxycarbonyl method). be able to.
また、 ァドバンスト ·ケムテック (Advanced ChemTech) 社、 パ一キン ·エルマ —社、フアルマシア社、プロテイン 'テクノロジ一'インス トウルメント (Protein Technology Instrument) 社ヽ シンセセノレ ·ぺガ (Synt ecell-Vega) 社、 ノヽ。——セ プティブ (PerSeptive) 社、 島津製作所等のペプチド合成機を利用し化学合成す ることもできる。 In addition, Advanced ChemTech, Parkin Elma, Pharmacia, Protein 'Technology' Instrument Company, Synthene Cell-Vega, and Novet. ——Chemical synthesis can also be performed using a peptide synthesizer such as PerSeptive or Shimadzu Corporation.
精製した本発明のポリべプチドの構造解析は、 蛋白質化学で通常用いられる方 法、 例えば遺伝子クローニングのためのタンパク質構造解析 (平野久著、 東京化 学同人発行、 1 9 9 3年) に記載の方法により実施可能である。 , Structural analysis of the purified polypeptide of the present invention is described in a method commonly used in protein chemistry, for example, protein structural analysis for gene cloning (Hisashi Hirano, published by Tokyo Kagaku Dojin, 1993). The method can be implemented by the following method. ,
[ 3 ] 本発明のポリぺプチドを認識する抗体の調製 [3] Preparation of an antibody that recognizes the polypeptide of the present invention
( 1 ) ポリクロ一ナル抗体の調製 (1) Preparation of polyclonal antibody
上記 [ 2 ] に記載の方法により取得した本発明のポリペプチドの全長または部 分断片精製標品を抗原として用い、 動物に投与することによりポリクロ一ナル抗 体を作製することができる。 A polyclonal antibody can be produced by using the purified full-length or partial fragment of the polypeptide of the present invention obtained by the method described in the above [2] as an antigen and administering it to an animal.
-投与する動物として、 ゥサギ、 ャギ、 ラヅト、 マウス、 ハムスター等を用いる ことができる。 -Egret, goat, rat, mouse, hamster, etc. can be used as the animal to be administered.
該抗原の投与量は動物 1匹当たり 5 0〜1 0 0 z gが好ましい。 ぺプチドを用いる場合は、ぺプチドをスカシガイへモシァニン(keyhole limpet haemocyanin)ゃ牛チログ口プリン等のキヤリァ蛋白に共有結合させたものを抗原 とするのが望ましい。 抗原とするペプチドは、 ペプチド合成機で合成することが できる。 The dose of the antigen is preferably 50 to 100 zg per animal. In the case of using a peptide, it is preferable to use, as an antigen, a peptide obtained by covalently bonding the peptide to a carrier protein such as keyhole limpet haemocyanin or bovine tilogin purine. A peptide serving as an antigen can be synthesized by a peptide synthesizer.
該抗原の投与は、 1 回目の投与の後 1 ~ 2週間おきに 3〜1 0回行う。 各投与 後、 3〜7日目に眼底静脈叢より採血し、 該血清が免疫に用いた抗原と反応する ことを酵素免疫測定法 〔酵素免疫測定法 (ELISA法) :医学書院刊 1976年、 Antibodies - A Laboratory Manual, Cold Spring Harbor Laboratory Press ( 1988) The administration of the antigen is performed 3 to 10 times every 1 to 2 weeks after the first administration. Blood is collected from the fundus venous plexus 3 to 7 days after each administration, and the reaction of the serum with the antigen used for immunization is determined by enzyme-linked immunosorbent assay [Enzyme-linked immunosorbent assay (ELISA): published by Medical Shoin 1976 Antibodies-A Laboratory Manual, Cold Spring Harbor Laboratory Press (1988)
〕 等で確認する。 ] Confirm with.
免疫に用いた抗原に対し、該血清が充分な抗体価を示した非ヒト哺乳動物より血 清を取得し、 該血清を分離、 精製することによりポリクロ一ナル抗体を取得する ことができる。 A polyclonal antibody can be obtained by obtaining serum from a non-human mammal whose serum shows a sufficient antibody titer against the antigen used for immunization, and separating and purifying the serum.
分離、 精製する方法としては、 遠心分離、 4 0〜 5 0 %飽和硫酸アンモニゥム による塩析、 力プリル酸沈殿 (Antibodies, A Laboratory Manual, Cold Spring Harbor Laboratory, (1988)〕 、 または D E A E—セファロ一スカラム、 陰イオン 交換カラム、 プロティン Aまたは G—カラムあるいはゲル濾過カラム等を用いる クロマトグラフィー等を、 単独または組み合わせて処理する方法があげられる。 ( 2 ) モノクローナル抗体の調製 Separation and purification methods include centrifugation, salting out with 40-50% saturated ammonium sulfate, force prillic acid precipitation (Antibodies, A Laboratory Manual, Cold Spring Harbor Laboratory, (1988)), or DEAE-Cephalone. (2) Preparation of monoclonal antibodies, such as chromatography using a chromatography column, anion exchange column, protein A or G-column, gel filtration column, etc.
(2-1 )抗体産生細胞の調製 (2-1) Preparation of antibody-producing cells
上記(1 )において、免疫に用いた抗原に対し、その血清が十分な抗体価を示した ラットを抗体産生細胞の供給源として供する。 In the above (1), a rat whose serum shows a sufficient antibody titer against the antigen used for immunization is used as a source of antibody-producing cells.
該抗体価を示したラットに抗原物質を最終投与した後 3〜7日目に、 脾臓を摘 出する。 The spleen is removed 3 to 7 days after the final administration of the antigenic substance to the rat showing the antibody titer.
該脾臓を M E M培地 (日水製薬社製) 中で細断し、 ピンセットでほぐし、 1 , 2 0 0 r p mで 5分間遠心分離した後、 上清を捨てる。 The spleen is shredded in MEM medium (manufactured by Nissui Pharmaceutical), loosened with forceps, centrifuged at 1,200 rpm for 5 minutes, and the supernatant is discarded.
得られた沈殿画分の脾細胞をトリス一塩化アンモニゥム緩衝液 (p H 7 . 6 5 ) で 1〜2分間処理し赤血球を除去した後、 M E M培地で 3回洗浄し、 得られた 脾細胞を抗体産生細胞として用いる。 The resulting precipitate fraction spleen cells were treated with Tris ammonium chloride buffer (pH 7.6.5) for 1 to 2 minutes to remove red blood cells, and then washed three times with MEM medium. Splenocytes are used as antibody producing cells.
(2 - 2)骨髄腫細胞の調製 (2-2) Preparation of myeloma cells
骨髄腫細胞としては、 マウスまたはラットから取得した株化細胞を使用する。 例えば、 8-ァザグァニン耐性マウス (BALB/c由来) 骨髄腫細胞株 As myeloma cells, cell lines obtained from mice or rats are used. For example, 8-azaguanine resistant mouse (derived from BALB / c) myeloma cell line
P3-X63Ag8-Ul(P3-Ul) CCurr. Topics Microbiol. Immunol., 81, 1 (1978), Eur. J. I匪 nol., 6, 511 (1976)〕 、 SP2/0-Agl4(SP-2) (Nature, 276, 269 (1978) 〕 、 P3-X63-Ag8653(653) 〔J. Immunol., 123, 1548 (1979)〕 ヽ P3- X63- Ag8(X63) 〔Nature, 495 (1975)〕 等を用いることができる。 これらの細胞株は、 8— ァザグァニン培地 〔R P M I— 1640培地にグルタミン ( 1. 5 mm o 1 /L )、 2—メルカプトエタノール ( 5 X 10—5mo 1/L)、 ジェン夕マイシン ( 10〃g/mL)および牛胎児血清 (FCS) (CSL社製、 10%) を加えた 培地 (以下、 正常培地という) に、 さらに 8—ァザグァニン (15〃g/mL) を加えた培地〕 で »代するが、 細胞融合の 3〜4日前に正常培地で培養し、 融合 には該細胞を 2 X 107個以上用いる。 P3-X63Ag8-Ul (P3-Ul) CCurr.Topics Microbiol. Immunol., 81, 1 (1978), Eur.J.I maraudal nol., 6, 511 (1976)], SP2 / 0-Agl4 (SP- 2) (Nature, 276, 269 (1978)), P3-X63-Ag8653 (653) [J. Immunol., 123, 1548 (1979)] ヽ P3-X63-Ag8 (X63) [Nature, 495 (1975) ] and the like can be used. these cell lines include 8-Azaguanin medium [RPMI-1640 medium glutamine (1. 5 mm o 1 / L ), 2- mercaptoethanol (5 X 10- 5 mo 1 / L ), Genyumycin (10 µg / mL) and fetal calf serum (FCS) (10%, CSL) (hereinafter referred to as “normal medium”), followed by 8-azaguanine (15 µg / mL). )), But culture the cells in a normal medium 3 to 4 days before cell fusion, and use at least 2 x 10 7 cells for fusion.
(2-3)ハイプリ ド一マの作製 (2-3) Production of hybridoma
(2 - 1)で取得した抗体産生細胞と(2- 2)で取得した骨髄腫細胞を MEM培地また は PBS (リン酸ニナトリウム 1. 83g、 リン酸一カリウム 0. 21g、 食塩 7. 65g、 蒸留水 1L、 pH7. 2)でよく洗浄し、 細胞数が、 抗体産生細胞 :骨髄腫細胞 =5〜 ; L 0 : 1になるよう混合し、 1, 200 rpmで 5分間遠心 分離した後、 上清を捨てる。 The antibody-producing cells obtained in (2-1) and the myeloma cells obtained in (2-2) were combined with MEM medium or PBS (1.83 g of disodium phosphate, 0.21 g of monopotassium phosphate, and 7.65 g of salt). After washing well with 1 L of distilled water, pH 7.2), mix the cells so that the number of antibody-producing cells: myeloma cells = 5-; L 0: 1 and centrifuge at 1,200 rpm for 5 minutes. Discard the supernatant.
得られた沈澱画分の細胞群をよくほく、し、 該細胞群に、 攪拌しながら、 37°C で、 108抗体産生細胞あたり、 ポリエチレングリコ一ルー 1000 (PEG— 1000) 2 g MEM 2mLおよびジメチルスルホキシド (DMS 0) 0. 7 mLを混合した溶液を 0. 2〜lmL添加し、 更に 1〜 2分間毎に MEM培地 1 〜2mLを数回添加する。 The resulting precipitated fraction of cell groups may Hoku, and, in the group of cells, with stirring, at 37 ° C, 10 8 antibody-producing cells per polyethylene glycol one Roux 1000 (PEG- 1000) 2 g MEM Add 0.2 to 1 mL of a mixed solution of 2 mL and 0.7 mL of dimethyl sulfoxide (DMS 0), and add 1 to 2 mL of MEM medium several times every 1 to 2 minutes.
添加後、 MEM培地を加えて全量が 5 OmLになるように調製する。 After the addition, add MEM medium to adjust the total volume to 5 OmL.
該調製液を 900 r p mで 5分間遠心分離後、 上清を捨てる。 得られた沈殿画分の細胞を、 ゆるやかにほく、した後、 メスピペットによる吸込 み、 吹出しでゆるやかに HAT培地 〔正常培地にヒポキサンチン (10-4niol /L)、 チミジン (1. 5 X 10 ~5m 01/L) およびアミノプテリン (4x 1 0"7mo 1/L) を加えた培地〕 10 OmL中に懸濁する。 After centrifuging the preparation at 900 rpm for 5 minutes, discard the supernatant. The precipitated fraction of cells obtained, gently Nihoku, after, viewed suction from a graduated pipette, gently HAT medium [normal medium hypoxanthine in balloon (10- 4 niol / L), thymidine (1.5 X 10 ~ 5 m 01 / L ) and aminopterin (suspended in 1 0 "7 mo 1 / L ) was added medium] in 10 OML 4x.
該懸濁液を 96穴培養用プレートに 100〃L/穴ずつ分注し、 5% 〇02ィ ンキュベ一夕一中、 37 °Cで?〜 14日間培養する。 The suspension was dispensed by 100〃L / well to the plate for a 96-well culture, 5% Rei_0 2 in I Nkyube Isseki one, at 37 ° C? Incubate for ~ 14 days.
培養後、 培養上清の一部をとりアンチボディィズ 〔Antibodies- A Laboratory Manual, Cold Spring Harbor Laboratory Press, Chapter 14 (1988)〕等に述べら れている酵素免疫測定法により、 本発明のポリべプチドに特異的に反応するハイ プリ ドーマを選択する。 After the cultivation, a part of the culture supernatant was removed and subjected to the enzyme immunoassay described in Antibodies-A Laboratory Manual, Cold Spring Harbor Laboratory Press, Chapter 14 (1988), etc. Select hybridomas that react specifically with the polypeptide.
酵素免疫測定法の具体的例として、 以下の方法をあげることができる。 The following method can be given as a specific example of the enzyme immunoassay.
免疫の際、 抗原に用いた本発明のポリべプチドの全長または部分断片精製標品 を適当なプレートにコ一トし、ハイプリ ド一マ培養上清もしくは後述の(2-4)で得 られる精製抗体を第一抗体として反応させ、 さらに第二抗体としてビォチン、 酵 素、 化学発光物質あるいは放射線化合物等で標識した抗ラットイムノグロブリン 抗体を反応させた後に標識物質に じた反応を行ない、 本発明のポリべプチドに 特異的に反応するものを本発明のポリベプチドに対するモノクローナル抗体を生 産するハイプリ ド一マとして選択する。 At the time of immunization, a purified full-length or partial fragment of the polypeptide of the present invention used as an antigen is coated on an appropriate plate, and the obtained supernatant is obtained from a hybridoma culture supernatant or (2-4) described later. The purified antibody is reacted as the first antibody, and the second antibody is reacted with an anti-rat immunoglobulin antibody labeled with biotin, an enzyme, a chemiluminescent substance, a radiation compound, or the like, followed by a reaction according to the labeling substance. Those which specifically react with the polypeptide of the present invention are selected as hybridomas producing monoclonal antibodies against the polypeptide of the present invention.
該ハイプリ ド一マを用いて、 限界希釈法によりクローニングを 2回繰り返し 〔 1回目は、 HT培地(HAT培地からアミノプテリンを除いた培地)、 2回目は、 正常培地を使用する〕 、 安定して強い抗体価の認められたものを本発明のポリべ プチドに対するモノクローナル抗体を生産するハイプリ ドーマ株として選択する (2 - 4)モノク口一ナル抗体の調製 Using the hybridoma, cloning was repeated twice by the limiting dilution method [First time, use HT medium (medium obtained by removing aminopterin from HAT medium), second time, use normal medium]. (2-4) Preparation of Monoclonal Monoclonal Antibody with High Antibody Titer
プリスタン処理 〔2, 6 , 10, 14—テトラメチルペン夕デカン (Pristane )-0. 5mLを腹腔内投与し、 2週間飼育する〕 した 8〜10週令のマウスまた はヌードマウスに、( 2 - 3 )で取得した本発明のポリペプチドに対するモノクローナ ル抗体を生産するハイプリ ドーマ細胞 5~ 20 X 106細胞/匹を腹腔内に注射 する。 10〜21日間でハイプリ ドーマは腹水癌化する。 Pristane-treated [2,6,10,14-tetramethyl-pen-decane (Pristane) -0.5 mL was intraperitoneally administered and bred for 2 weeks] to 8-10 week old mice or nude mice, (2 -Intraperitoneal injection of 5 to 20 x 10 6 hybridoma cells producing a monoclonal antibody against the polypeptide of the present invention obtained in 3) I do. Hypridoma develops ascites cancer in 10 to 21 days.
該腹水癌化したマウスから腹水を採取し、 3, 000 r pmで 5分間遠心分離 して固形分を除去する。 ' 得られた上清より、 ポリクロ一ナル抗体で用いた方法と同様の方法でモノクロ ーナル抗体を精製、 取得することができる。 The ascites is collected from the mouse with ascites tumor and centrifuged at 3,000 rpm for 5 minutes to remove solids. 'From the obtained supernatant, a monoclonal antibody can be purified and obtained by the same method as that used for the polyclonal antibody.
抗体のサブクラスの決定は、 マウスモノクローナル抗体夕イビングキッ卜また はラットモノクローナル抗体タイピングキットを用いて行う。 蛋白質量は、 口一 リ一法あるいは 28 Onmでの吸光度より算出する。 The antibody subclass is determined using a mouse monoclonal antibody evening kit or a rat monoclonal antibody typing kit. The protein amount is calculated by the oral method or the absorbance at 28 Onm.
[4]本発明のポリペプチドの PDE活性の測定 [4] Measurement of PDE activity of polypeptide of the present invention
[2] に記載の方法により、 大腸菌、 酵母、 昆虫細胞、 動物細胞等を宿主とし て、 本発明のポリペプチドを発現させたもの、 あるいは、 アフリカヅメガエル卵 母細胞に DN Aあるいは vitroで調製した cRNAを用いてマイクロインジェ クシヨン法 (Methods in Enzymology, Z07, 225 (1992)、 Methods in Enzymology, 254, 458 (1995)〕 により発現させたもの、 in v:itro翻訳産物等を P D E活性の測 定に用いる。 PDE活性は検出可能な試薬 (例えば、 放射'性試薬、 蛍光試薬また は比色試薬) で標識された環状ヌクレオチド (例えば、 [3H]cAMPあるいは [ 3H]cGMP) の 3' —ホスホエステル結合を加水分解して生成するヌクレオシ ド 5, 一モノホスフェート (例えば、 [3H]5, AMPあるいは [3H] 5 ' GMP ) の分離、 定量、 あるいはさらに、 5, ヌクレオチダ一ゼ処理した後、 生成物を 分離、 定量することにより測定する [ Biol. Chem., 257, 1973 (1982), Methods in Enzymology, 159, 457 (1988)]。 また、 内在性の 2つの PDE (pde 1、 p d e 2)を欠損した酵母 [例えば、 Saccharomyces cerevisiae strain PP5 (ATCC number 96135)、 Saccharomyces cerevisiae strain 10DAB (ATCC number 74049) ] 中で本発明のポリペプチドを発現させ、 熱ショック感受性、 窒素欠乏に対する 感受性などの回復を指標に; PDE活性を検出することもできる [Proc. Natl. Acad. Sci. USA, 905 11970 (1993)、 J. Biol. Chem., 274, 4839 (1999)]。 According to the method described in [2], the polypeptide of the present invention is expressed in Escherichia coli, yeast, insect cells, animal cells, etc. as a host, or prepared in DNA or in vitro in African omega frog oocytes. Expression of the cRNA obtained by the microinjection method (Methods in Enzymology, Z07, 225 (1992), Methods in Enzymology, 254, 458 (1995)), and in v: itro translation products were measured for PDE activity. PDE activity is measured using a cyclic nucleotide (eg, [ 3 H] cAMP or [ 3 H] cGMP) labeled with a detectable reagent (eg, a radioactive, fluorescent, or colorimetric reagent). '— Separation, quantification of nucleoside 5, monomonophosphate (eg, [ 3 H] 5, AMP or [ 3 H] 5' GMP) formed by hydrolysis of phosphoester bond, or After treatment, the product is Measured by separation and quantification [Biol. Chem., 257, 1973 (1982), Methods in Enzymology, 159, 457 (1988)] In addition, two intrinsic PDEs (pde1, pde2) are missing The polypeptide of the present invention is expressed in a yeast (e.g., Saccharomyces cerevisiae strain PP5 (ATCC number 96135), Saccharomyces cerevisiae strain 10DAB (ATCC number 74049)), and recovery of heat shock sensitivity, sensitivity to nitrogen deficiency, etc. is used as an index. ; PDE activity can also be detected [Proc. Natl. Acad. Sci. USA, 90 5 11970 (1993), J. Biol. Chem., 274, 4839 (1999)].
[5]本発明のポリペプチドのァゴニストまたはアン夕ゴニストの探索 ·同定お よび治療薬としての利用 [5] Search / identification of agonist or angelic gonist of the polypeptide of the present invention And therapeutic use
上記 [ 4 ] の活性測定に用いることのできる細胞、 あるいは、 後述 [ 7 ] の方 法で本発明のポリべプチドあるいは mR N Aを発現していることの確認された組 織、 細胞等を用い、 被験試料を添加し、 上記 [ 4 ] 記載の方法で、 P D E活性を 測定する。 Cells that can be used for the activity measurement of [4] above, or tissues and cells that have been confirmed to express the polypeptide or mRNA of the present invention by the method of [7] described below are used. A test sample is added, and PDE activity is measured by the method described in [4] above.
被験試料の添加の有無における、 本発明のポリぺプチドの P D E活性の比較、 あるいは、 本発明のポリぺプチドを発現させた内在性 P D E欠損酵母を用いたバ ィオアッセィにより、 被験試料の中から P D E活性を増強する物質 (ァゴ二スト ) および阻害する物質 (アン夕ゴニスト) をスクリーニングすることができる。 被験試料としては、 合成化合物、 天然に存在する蛋白質、 人工的に合成された 蛋白質、 ペプチド、 糖質、 脂質、 これらの修飾体、 誘導体を、 また哺乳動物 (例え ばマウス、 ラヅト、 モルモヅト、 ハムスター、 ブ夕、 ヒヅジ、 ゥシ、 ゥマ、 ィヌ、 ネコ、 サル、 ヒト等)の尿、 体液、 組織抽出物、 細胞培養上清、 細胞抽出物を、 更 に、 非ペプチド性化合物、 発酵生産物、 植物その他の生物の抽出物等をあげるこ とができる。 Comparison of PDE activity of the polypeptide of the present invention with or without the addition of the test sample, or bioassay using endogenous PDE-deficient yeast expressing the polypeptide of the present invention, Substances that enhance the activity (agonist) and substances that inhibit the activity (angianist) can be screened. Test samples include synthetic compounds, naturally occurring proteins, artificially synthesized proteins, peptides, carbohydrates, lipids, modified forms and derivatives thereof, and mammals (for example, mice, rats, guinea pigs, hamsters). Urine, body fluids, tissue extracts, cell culture supernatants, cell extracts, and other non-peptidic compounds, as well as fermented fertilizers, urine, bovine, ovine, ovine, poma, canine, cat, monkey, human, etc. Examples include products, extracts of plants and other organisms.
上記の方法により取得される、 本発明のポリぺプチドのァゴニストまたはアン 夕ゴニストは、 治療薬として単独で用いることが可能ではあるが、 通常は薬理学 的に許容される一つあるいはそれ以上の担体と一緒に混合し、 製剤学の技術分野 においてよく知られる任意の方法により製造した医薬製剤として用いることが望 ましい。 The agonist or aminogonist of the polypeptide of the present invention obtained by the above method can be used alone as a therapeutic agent, but is usually one or more pharmacologically acceptable. It is desirable to mix it with a carrier and use it as a pharmaceutical preparation produced by any method well known in the pharmaceutical art.
該治療薬の投与方法としては、 治療に際し最も効果的な方法を使用することが 望ましく、 経口投与または、 口腔内、 気道内、 直腸内、 皮下、 筋肉内および静脈 内等の非経口投与による方法を用いることができる。 該治療薬の剤形としては、 軟膏剤、 噴霧剤、 カプセル剤、 錠剤、 顆粒剤、 シロ ヅ-プ剤、 乳剤、 座剤、 注射剤、 テープ剤等をあげることができる。 It is desirable to use the most effective method for the treatment, and it is preferable to use the method by oral administration or parenteral administration such as oral, respiratory, rectal, subcutaneous, intramuscular, and intravenous administration. Can be used. Examples of the dosage form of the therapeutic agent include ointments, sprays, capsules, tablets, granules, syrups, emulsions, suppositories, injections, tapes and the like.
経口投与に適当な製剤としては、乳剤、 シロップ剤、 カプセル剤、錠剤、散剤、 顆粒剤等をあげることができる。 ' 乳剤およびシロップ剤のような液体調製物は、 水、 ショ糖、 ソルビトール、 果 糖等の糖類、ポリエチレングリコ一ル、プロピレングリコール等のグリコ一ル類、 ごま油、 オリ一ブ油、 大豆油等の油類、 p—ヒドロキシ安息香酸エステル類等の 防腐剤、 スト口ベリ一フレーバ一、 ペパーミント等のフレーバー類等を添加剤と して用いて製造することができる。 Formulations suitable for oral administration include emulsions, syrups, capsules, tablets, powders, granules and the like. ' Liquid preparations such as emulsions and syrups are prepared from sugars such as water, sucrose, sorbitol, fructose, glycols such as polyethylene glycol, propylene glycol, sesame oil, olive oil, soybean oil, etc. It can be produced using preservatives such as oils, p-hydroxybenzoic acid esters, etc., and flavors such as bery flavor, peppermint and the like as additives.
カプセル剤、 錠剤、 散剤、 顆粒剤等は、 乳糖、 ブドウ糖、 ショ糖、 マンニト一 ル等の賦形剤、 デンプン、 アルギン酸ナトリウム等の崩壊剤、 ステアリン酸マグ ネシゥム、 タルク等の滑沢剤、 ポリビニルアルコール、 ヒドロキシプロピルセル ロース、 ゼラチン等の結合剤、 脂肪酸エステル等の界面活性剤、 グリセリン等の 可塑剤等を添加剤として用い製造することができる。 Capsules, tablets, powders, granules, etc. are excipients such as lactose, glucose, sucrose, mannitol, disintegrants such as starch and sodium alginate, lubricants such as magnesium stearate, talc, polyvinyl chloride Binders such as alcohol, hydroxypropyl cellulose and gelatin, surfactants such as fatty acid esters, and plasticizers such as glycerin can be used as additives.
非経口投与に適当な製剤としては、 注射剤、 座剤、 噴霧剤等があげられる。 注射剤は、 例えば、 塩溶液、 ブドウ糖溶液、 あるいは両者の混合物からなる担 体等を用いて調製することができる。 Formulations suitable for parenteral administration include injections, suppositories, sprays and the like. An injection can be prepared using, for example, a carrier composed of a salt solution, a glucose solution, or a mixture of both.
座剤は、 例えば、 カカオ脂、 水素化脂肪またはカルボン酸等の担体を用いて調 製することができる。 Suppositories can be prepared using carriers such as cocoa butter, hydrogenated fats and carboxylic acids.
噴霧剤は、 上記で取得されたァゴニストまたはアン夕ゴニストをそのまま噴霧 剤として用いることが可能であるが、 受容者の口腔および気道粘膜を刺激せず、 かつ該ィ匕合物を微細な粒子として分散させ吸収を容易にさせる担体等を用いて調 製した噴霧剤が好ましい。 As the propellant, the agonist or angonist obtained above can be used directly as a propellant, but it does not irritate the oral cavity and the respiratory tract mucosa of the recipient, and the conjugate is used as fine particles. Sprays prepared using a carrier or the like that disperses and facilitates absorption are preferred.
担体として、 具体的には乳糖、 グリセリン等を例示することができる。 Specific examples of the carrier include lactose and glycerin.
上記で取得されたァゴニストまたはアン夕ゴニスト、および担体の性質により、 エア口ゾル、 ドライパゥダ一等の製剤を調製することが可能である。 Formulations such as aerosols and dry powders can be prepared depending on the properties of the agonist or angelic gonist obtained above and the carrier.
これらの非経口剤においても、 経口剤で添加剤として例示した成分を添加する ことができる。 In these parenteral preparations, the components exemplified as additives for oral preparations can be added.
-投与量または投与回数は、 目的とする治療効果、 投与方法、 治療期間、 年齢、 体重等により異なるが、 通常成人 1日当たり 1 0 z g/k g〜8 m g/k gであ [6]本発明のポリペプチドの発現を調節する化合物 (以下、 発現調節化合物と略' す) の探索および同定 -The dose or frequency of administration varies depending on the desired therapeutic effect, administration method, treatment period, age, body weight, etc., but is usually 10 zg / kg to 8 mg / kg per adult per day. [6] Search and identification of compounds that regulate the expression of the polypeptide of the present invention (hereinafter, abbreviated as expression regulating compounds)
( 1 )本発明の抗体を用いた発現調節化合物の探索および同定 (1) Search and identification of expression regulating compounds using the antibody of the present invention
本発明のポリべプチドを発現する細胞を被験試料と接触させた後、 本発明の抗 体を用いることにより、 本発明のポリペプチドの発現調節化合物を探索、 同定す ることができる。 After the cells expressing the polypeptide of the present invention are brought into contact with a test sample, the compound for regulating the expression of the polypeptide of the present invention can be searched and identified by using the antibody of the present invention.
細胞としては、 本発明のポリペプチドを発現している細胞、 細胞株、 組織なら いかなるものでも用いることができる。 As the cell, any cell, cell line, or tissue expressing the polypeptide of the present invention can be used.
例えば、 下記 [7] に記載した抗体により免疫学的に検出する方法あるいは m : RNAを検出する方法を用い、 該ポリペプチドの発現が認められた細胞、 細胞株 あるいは組織を用いることができる。 For example, a cell, cell line, or tissue in which the expression of the polypeptide has been observed can be used by the method of immunologically detecting with the antibody described in [7] or the method of detecting m: RNA.
好適な細胞株として、 例えば、 Hep(¾細胞をあげることができる。 Suitable cell lines include, for example, Hep (¾ cells).
被験試料としては上記 [5]の被験試料であげたものを用いることができる。 本発明のポリべプチドを発現する細胞を、 該細胞の増殖することのできる培地 に懸濁し、 被験試料を該培地に添加し、 該細胞と接触させた後、 本発明の抗体を 用い、 該細胞の発現したポリペプチド含量を定量する。 定量する方法としては、 例えば下記の免疫細胞染色を利用した方法をあげることができる。 As the test sample, those described in the test sample in the above [5] can be used. The cells expressing the polypeptide of the present invention are suspended in a medium capable of growing the cells, a test sample is added to the medium, and the cells are contacted with the cells. Quantify the expressed polypeptide content of the cells. As a method for quantification, for example, a method using the following immune cell staining can be mentioned.
培養付着細胞を PB S緩衝液で洗浄し、 0. 05% トリプシン、 0. 02 % E D T A (エチレンジァミン 4酢酸)を含む P B S緩衝液 3 m Lを加え、 余分な溶液 を除いた後、 37°C、 5分間インキュベートすることによりフラスコより細胞を 剥がす。 Wash the adherent cells with PBS buffer, add 3 mL of PBS buffer containing 0.05% trypsin and 0.02% EDTA (ethylenediamine tetraacetic acid), remove excess solution, and remove the solution. The cells are detached from the flask by incubating for 5 minutes.
浮遊細胞については培養細胞をそのまま用いることができる。 該細胞を PBS 緩衝液で洗浄後、 固定液に懸濁する。 固定液としては例えば 3. 7%ホルムアル デヒドを含む PB S緩衝液を挙げることができる。 室温にて 30分インキュべ一 ト後、 PBS緩衝液で洗浄し膜透過性反応液に懸濁する。 月莫透過性反応液として は例えば 0. 1% Trit on X— 100を含む P B S緩衝液を挙げることが できる。 該処理を行った細胞を免疫細胞染色用緩衝液 (1% BSA、 0. 02% ED TA、 0. 05% アジ化ナトリゥムを含む PB S)等に懸濁し、 1〜20 X 10 5個ずつ丸底 96穴プレートに分注する。 Cultured cells can be used as they are for suspension cells. The cells are washed with a PBS buffer and suspended in a fixative. Examples of the fixative include a PBS buffer containing 3.7% formaldehyde. After incubating at room temperature for 30 minutes, wash with PBS buffer and suspend in the membrane permeable reaction solution. An example of the reaction solution that is permeable to the moon is a PBS buffer solution containing 0.1% Triton X-100. The treated cells are suspended in a buffer for staining of immune cells (PBS containing 1% BSA, 0.02% EDTA, 0.05% sodium azide), etc., and 1 to 20 × 10 5 cells are suspended. Dispense into a round bottom 96-well plate.
該プレートに、 本発明のモノクローナル抗体を分注する。 The monoclonal antibody of the present invention is dispensed on the plate.
モノクロ一ナル抗体としては、 [3] (2-3)で取得した本発明のモノクロ一ナル 抗体を産生するハイプリ ドーマの培養上清、 [3] (2-4)で取得した精製モノクロ —ナル抗体をあげることができる。 更に、 該モノクローナル抗体を標識した抗体 も用いることができる。 Examples of the monoclonal antibody include the culture supernatant of a hybridoma producing the monoclonal antibody of the present invention obtained in [3] (2-3), and the purified monoclonal obtained in [3] (2-4). Antibodies can be mentioned. Furthermore, an antibody labeled with the monoclonal antibody can also be used.
モノクローナル抗体を標識した抗体としては、 例えばビォチン標識した抗体を あげることができる。 As an antibody labeled with a monoclonal antibody, for example, a biotin-labeled antibody can be mentioned.
ピオチン標識した抗体は公知の方法 (酵素抗体法:学際企画刊 1985年) で調製 することができる。 A biotin-labeled antibody can be prepared by a known method (enzyme antibody method: interdisciplinary project, 1985).
上記抗体を、 免疫細胞染色用緩衝液あるいは 10%動物血清を含む免疫細胞染 色用緩衝液を用いて 0. 1〜 50〃 g/mLの濃度になるように希釈する。 The above antibody is diluted to a concentration of 0.1 to 50 µg / mL using an immune cell staining buffer or an immune cell staining buffer containing 10% animal serum.
該希釈抗体を 20〜500 L/穴となるように分注し、 氷冷下で 30分間放 置する。 Dispense the diluted antibody to 20-500 L / well and leave under ice-cooling for 30 minutes.
標識されていない抗体を用いた場合には、 上記プレートに免疫細胞染色用緩衝 液を添加し、 細胞を洗浄する。 F I T C (fluorescein isothiocyanate)あるい はフィコエリスリン等の蛍光色素で標識した抗マウスィムノグロブリン抗体ある いは抗ラヅトイムノグロブリン抗体を 0. 1〜50〃g/mL程度の濃度で含む 免疫細胞染色用緩衝液を 50〜500 L/穴ほど分注し、 氷泠下で 30分間遮 光して放置する。 When an unlabeled antibody is used, a buffer for immunocell staining is added to the plate, and the cells are washed. Anti-mouse immunoglobulin antibody or anti-rat immunoglobulin antibody labeled with a fluorescent dye such as FITC (fluorescein isothiocyanate) or phycoerythrin at a concentration of about 0.1 to 50 μg / mL Dispense about 50-500 L / well of cell staining buffer, and leave it on ice for 30 minutes while blocking light.
ビォチン標識した該モノクロ一ナル抗体を用 、た場合には、 上記プレートに F I T Cあるいはフィコエリスリン等の蛍光色素で標識したストレブトアビジンを 5-0〜500〃L/穴ほど分注し、 氷冷下で 30分間遮光して放置する。 In the case of using the biotin-labeled monoclonal antibody, strebutavidin labeled with a fluorescent dye such as FITC or phycoerythrin is dispensed into the above plate in an amount of 5-0 to 500 μL / well, and the plate is iced. Leave in the light for 30 minutes under cooling.
両ケ一スとも、 放置後、 プレートに免疫細胞染色用緩衝液を添カ卩し、 細胞をよ く洗浄し、 蛍光顕微鏡、 セルソ一夕一等により解析する。 被験試料を添加しない系と比較し、 本発明のポリぺプチド含量を増加あるいは 減少させる被験試料を探索することにより、 発現調節化合物を同定することがで きる。 In both cases, after standing, the plate is added with a buffer solution for staining of immune cells, the cells are thoroughly washed, and analyzed using a fluorescence microscope, Celso overnight, or the like. Expression-modulating compounds can be identified by searching for a test sample that increases or decreases the polypeptide content of the present invention as compared to a system to which no test sample is added.
( 2 ) 本発明のポリぺプチド遺伝子の転写産物定量系を用いた探索および同定 本発明のポリぺプチドあるいは該ポリぺプチドをコードする mR N Aを発現す る細胞を被験試料と接触させた後、 該 mR NA含量を定量することにより発現調 節化合物を探索、 同定することができる。 (2) Search and Identification Using the Transcript Quantification System for the Polypeptide Gene of the Present Invention After Contacting Cells Expressing the Polypeptide of the Present Invention or mRNA Encoding the Polypeptide with a Test Sample By quantifying the mRNA content, expression-regulating compounds can be searched and identified.
本発明のポリぺプチドあるいは該ポリぺプチド mR NAを発現する細胞として は、 例えば上記 [ 6 ] ( 1)記載の細胞株を、 被験試料としては上記 [ 5 ] のものを 用いることができる。 As the cell expressing the polypeptide or the mRNA of the present invention, for example, the cell line described in the above [6] (1) can be used, and as the test sample, the one described in the above [5] can be used.
本発明のポリぺプチドあるいは該ポリペプチドをコードする mR N Aを発現す る細胞を、 該細胞の増殖することのできる培地に懸濁し、 被験試料を該培地に添 加し、 該細胞を接触させた後、 該細胞の発現した該 mR NAの含量を、 通常のノ —ザンハイブリダイゼ一ション法、 R N Aのドットプロヅトハイブリダイゼ一シ ヨン法、 : R T— P C R法等を用い定量する。 Cells expressing the polypeptide of the present invention or mRNA encoding the polypeptide are suspended in a medium capable of growing the cells, a test sample is added to the medium, and the cells are contacted. After that, the content of the mRNA expressed in the cells is quantified by a conventional Northern hybridization method, an RNA dot-protocol hybridization method, and an RT-PCR method. I do.
ハイブリダイゼ一ション法等に用いることのできるプローブおよび H T— P C R法等に用いることのできるブラィマーとして、 本発明のポリぺプチドをコード する遺伝子断片をあげることができる。 A gene fragment encoding the polypeptide of the present invention can be mentioned as a probe that can be used for the hybridization method or the like and a primer that can be used for the HT-PCR method or the like.
具体的には、 配列番号 2または配列番号 1 6に記載の塩基配列中の連続した 5 〜 6◦塩基と同じ配列を有するオリゴヌクレオチド、 該ォリゴヌクレオチドと相 補的な配列を有するオリゴヌクレオチドを好適に用いることができる。 Specifically, an oligonucleotide having the same sequence as the contiguous 5 to 6 bases in the nucleotide sequence of SEQ ID NO: 2 or SEQ ID NO: 16, an oligonucleotide having a sequence complementary to the oligonucleotide, It can be suitably used.
被験試料を添加しない系と比較し、 本発明のポリぺプチドをコードする mR N A含量を増加あるいは減少させる被験試料を探索することにより、 発現調節化合 物を同定することができる。 An expression-regulating compound can be identified by searching for a test sample that increases or decreases the mRNA content of the polypeptide of the present invention as compared to a system to which no test sample is added.
(-3 ) レポ一夕一遺伝子を用いた探索および同定 (-3) Search and identification using repo overnight gene
本発明のポリペプチドをコードする遺伝子の転写を制御する領域 (以下、 転写 制御領域と略す) の下流にレポ一夕一遺伝子の連結された D NAを含むプラスミ ドで形質転換された形質転換体と被験試料とを接触させた後、 レポー夕一遺伝子 によりコードされたポリべプチドの発現量を定量することにより発現調節化合物 を探索、 同定することができる。 Plasmid containing DNA linked to a repo-all-one gene downstream of a region that regulates transcription of a gene encoding the polypeptide of the present invention (hereinafter, abbreviated as a transcription control region). After contacting the transformant transformed with the test sample with the test sample, the expression controlling compound can be searched and identified by quantifying the expression level of the polypeptide encoded by the reporter gene.
転写制御領域は、 通常、 遺伝子の 5 ' 上流に含まれることが多い。 本発明のポ リペプチドをコードする遺伝子の 5, 上流領域は、 例えば Genome Walker kits ( Clontech社製) 等を用いて調製することができる。 また、 該領域を適当な制限酵 素を用い、適切な長さに切断した断片を転写制御領域として用いることができる。 レポ一ター遺伝子としては、 該遺伝子の翻訳産物が細胞内で安定であり、 該翻 訳産物の存在量が容易に定量できるものであればいかなるものでも用いることが でき、 該遺伝子がコードするポリペプチドとして、 例えば、 クロラムフエニコ一 ルァセチルトランスフェラ一ゼ( C A T )、 5-ガラクトシダ一ゼ ( 5— g a l ) 、 ルシフェラ一ゼ (l u c ) 、 一グルクロニダ一ゼ、 ェクオリン、 グリーンフル ォレツセントプロテイン (G F P ) 等をあげることができる。 A transcription control region is usually contained 5 ′ upstream of a gene. The 5, upstream region of the gene encoding the polypeptide of the present invention can be prepared using, for example, Genome Walker kits (Clontech). In addition, a fragment obtained by cutting this region using an appropriate restriction enzyme to an appropriate length can be used as a transcription control region. As the reporter gene, any gene can be used as long as the translation product of the gene is stable in cells and the amount of the translation product can be easily quantified. Examples of peptides include chloramphenic acid luciferase transferase (CAT), 5-galactosidase (5-gal), luciferase (luc), glucuronidase, equorin, green fluorescent protein (GFP) ) Etc. can be given.
該転写制御領域を含むレポ一夕一プラスミ ドを導入する宿主細胞としては、 い かなる細胞も用いることができるが、 好適には、 [ 6 ] ( 1 ) 記載の本発明のポ リぺプチドあるいは該ポリぺプチド mR N Aの発現が認められている細胞株を用 いることができる。 Any cell may be used as a host cell into which the repo overnight plasmid containing the transcription control region is introduced, but preferably, the polypeptide of the present invention described in [6] (1) is used. Alternatively, a cell line in which expression of the polypeptide mRNA has been confirmed can be used.
被験試料として、 上記 [ 5 ] のものを用いることができる。 The test sample described in [5] above can be used.
転写制御領域の下流に常法によりレポ一夕一遺伝子を連結し、 作製したプラス ミ ドを用い、 常法により宿主細胞を形質転換する。 . The repo overnight gene is ligated to the downstream of the transcription control region by an ordinary method, and the resulting plasmid is used to transform host cells by an ordinary method. .
また、 ポジティブセレクション用マ一力一 (G 4 1 8耐性遺伝子等) およびネ ガティブセレクション用マーカ一 (単純へルぺスウィルスのチミジンキナーゼゃ ジフテリア毒素 Aフラグメント遺伝子等)をつないだジーン夕一ゲティングベクタ —を作製し、 本発明のポリぺプチドをコ一ドする染色体遺伝子の一部をレポ一夕 —-遺伝子で置換した細胞株を作製することもできる 〔Nature3 336, 348 (1988)、 Analytical Biochemistry, 1 , 77 (1993)、 Gene Targeting, The Practical Approach Series, IRL Press (1993)〕 。 該形質転換体を、 例えば該細胞の増殖することのできる培地に懸濁し、 被験試 料を該培地に添加し、 該細胞を接触させた後、 該細胞の発現したレポ一夕一遺伝 子にコードされたポリペプチドの量を、 該ポリペプチドに適した方法で検出、 定 mlる。 In addition, gene selection for positive selection (such as G418 resistance gene) and negative selection marker (for simple herpesvirus thymidine kinase diphtheria toxin A fragment gene, etc.) Vector, and a cell line in which a part of the chromosomal gene encoding the polypeptide of the present invention is replaced with a repo overnight gene can also be prepared (Nature 3 336, 348 (1988), Analytical Biochemistry, 1, 77 (1993), Gene Targeting, The Practical Approach Series, IRL Press (1993)]. The transformant is suspended, for example, in a medium in which the cells can grow, a test sample is added to the medium, and the cells are brought into contact with each other. The amount of the encoded polypeptide is detected and determined by a method appropriate for the polypeptide.
検出、 定量法として、 CATの場合には、 例えば、 モレキュラー .クロ一ニン グ第 2版, 16章, 60頁に記載の方法を、 ^— galの場合には、 例えば、 モ レキユラ一 'クローニング第 2版, 16章, 66頁に記載の方法を、 lucの場 合には、 例えば、 実験医学別冊バイオマニュアルシリーズ 4遺伝子導入と発現- 解析法, 89(1994)に記載の方法を、 GF Pの場合には、例えば、 Proc. Natl. Acad. Sci. USA, 94, 4653 (1997)記載の方法等をあげることができる。 As a detection and quantification method, in the case of CAT, for example, the method described in Molecular Cloning 2nd Edition, Chapter 16, page 60, and in the case of ^ -gal, for example, molecular cloning In the case of luc, for example, the method described in Experimental Medicine Separate Volume Bio Manual Series 4 Gene Transfer and Expression-Analysis, 89 (1994) can be used in the case of luc. In the case of P, for example, the method described in Proc. Natl. Acad. Sci. USA, 94, 4653 (1997) can be mentioned.
被験試料を添加しない系と比較し、 レポ一夕一遺伝子にコードされたポリぺプ チド含量を増加あるいは減少させる被験試料を探索することにより、 発現調節化 合物を同定することができる。 Expression-controlling compounds can be identified by searching for a test sample that increases or decreases the content of the polypeptide encoded by the repo overnight gene as compared to a system in which the test sample is not added.
[7]本発明の DNA、 ポリペプチド、 抗体、 ァゴニスト、 アン夕ゴニストおよ び発現調節化合物の利用 [7] Utilization of DNA, polypeptide, antibody, agonist, angelic gonist and expression regulating compound of the present invention
(1)本発明の DNAは、 該 DNAをプロ一プとして用いて、 ヒトおよびマウス など非ヒト哺乳動物の組織や細胞から [1] (1)と同様にして抽出した RNAにつ いてノーザンハイプリダイゼ一シヨンを行うことにより、 その組織や細胞におけ る本発明のポリぺプチド遺伝子の m RNAを検出あるいは定量することができる。 各種の組織でその m R N Aの発現量を比較することにより本発明のポリぺプチド の組織発現分布を知ることができる。 (1) The DNA of the present invention is obtained by using the DNA as a probe for RNA extracted from tissues and cells of non-human mammals such as humans and mice in the same manner as in [1] (1). By performing the daidization, the mRNA of the polypeptide gene of the present invention in the tissue or cell can be detected or quantified. By comparing the mRNA expression levels in various tissues, the tissue expression distribution of the polypeptide of the present invention can be known.
(2)本発明のオリゴヌクレオチドは、 本発明の DNAの特異的プライマ一とし て用いて、 ヒトおよびマウスなど非ヒト哺乳動物の組織や細胞から [1] (1)と同 様にして抽出した RNAについて RT- P CR (reverse transcription PCR; PCE Pr-otocols (1990)〕 を行うことにより、 本発明のポリペプチドをコードする mR N Aの検出や定量を行うことができる。 (2) The oligonucleotide of the present invention was used as a specific primer of the DNA of the present invention and extracted from tissues and cells of non-human mammals such as humans and mice in the same manner as [1] (1). By performing RT-PCR (reverse transcription PCR; PCE Pr-otocols (1990)) on RNA, mRNA encoding the polypeptide of the present invention can be detected and quantified.
該 mRNAを定量する方法は、 本遺伝子が関与する病態の診断に用いることが できる。 The method for quantifying the mRNA can be used for diagnosis of a disease state associated with the present gene. it can.
各種病態モデル動物において、 該 mR N Aを定量することにより、 病態におけ る該遺伝子産物の重要性を明らかにすることができる。 また、 薬剤の有無による 該 mR N Aの発現量を比較することにより薬剤を評価することができる。 By quantifying the mRNA in various disease model animals, the importance of the gene product in the disease can be clarified. In addition, a drug can be evaluated by comparing the expression amount of the mRNA with or without the drug.
( 3 ) 本発明のオリゴヌクレオチドは、 これをプロ一ブとして用いて、 ヒトおよ びマウスなど非ヒト哺乳動物の組織切片に対して in situハイブリダィゼーショ ン 〔Methods in Enzymology, 254, 419 ( 1995)〕 を行うことにより、 組織内での 本発明のポリぺプチドの発現細胞の特定等のより細かい発現分布を知ることがで きる。 (3) Using the oligonucleotide of the present invention as a probe, in situ hybridization is performed on tissue sections of non-human mammals such as humans and mice [Methods in Enzymology, 254, 419 (1995)], it is possible to know a finer distribution of expression, such as identification of cells expressing the polypeptide of the present invention in a tissue.
これらの方法によって得られる、 本発明のポリペプチドがどのような組織や細 胞で発現しているかに関する情報および細胞がどのような刺激を受けたときに発 現量が変化するかに関する情報は、 本発明のポリべプチドの生理機能や病態への 関与を解析するために有用である。 The information obtained by these methods on the tissue and cells in which the polypeptide of the present invention is expressed and the information on what kind of stimulus the cells receive when the expression level changes are as follows. It is useful for analyzing the involvement of the polypeptide of the present invention in physiological functions and disease states.
( 4 ) 本発明の: D N Aをプローブとして用い、 ゲノム D N Aに対してサザンハイ プリダイゼ一シヨン 〔モレキユラ一 クロ一ニング第 2版〕 を行うことにより、 本発明のポリぺプチドをコードする遺伝子の変異を検出することができる。 (4) In the present invention: The mutation of the gene encoding the polypeptide of the present invention is carried out by performing Southern hybridization (second edition) on genomic DNA using the DNA as a probe. Can be detected.
変異の検出を行うことにより、 該遺伝子の変異が原因となっている可能性のあ る、 例えば糖尿病、 虚血性心疾患、 高血圧、 腎炎、 膝炎、 潰瘍、 アレルギー、 喘 息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴 呆または悪性腫瘍等の疾患の診断を行うことができる。 Detection of the mutation may cause the mutation in the gene, for example, diabetes, ischemic heart disease, hypertension, nephritis, knee inflammation, ulcer, allergy, asthma, rheumatism, osteoporosis, Diagnosis of diseases such as pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia or malignancy can be made.
( 5 ) 本発明のポリペプチドをコードする遺伝子を P C R等を用いて増幅して塩 基配列を解析することにより、 あるいは D N Aチップ等を用いて解析を行うこと により、 1塩基多型(single nucleotide polymorphisms; S N P )などの多型を検 出することができる。 多型の検出を行うことにより、 該遺伝子の多型が関連して い-る可能性のある、 例えば糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パー (5) A single nucleotide polymorphism (single nucleotide polymorphism) can be obtained by amplifying the gene encoding the polypeptide of the present invention using PCR or the like and analyzing the base sequence, or by performing analysis using a DNA chip or the like. polymorphisms (SNP) can be detected. By detecting the polymorphism, the polymorphism of the gene may be related, for example, diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis , Pain, anxiety, schizophrenia, manic depression, par
'病、 痴呆または悪性腫瘍等の疾患の診断を行うことができる。 (6) 本発明のアンチセンス'オリゴヌクレオチド(RNA、 DN Aまたはその誘 導体)を用い、本発明のポリべプチドをコ一ドする遺伝子の転写もしくは mRNA の翻訳を抑制することにより 〔化学, 46, 681 (1991)、 Bio/Technology, 9, 358 (1992)〕 、 該遺伝子が発症に関与している可能性のある、 例えば糖尿病、 虚血性 心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴呆、 感染症または悪性腫瘍 等の疾患の予防や治療に用いることができる。 'Diagnosis of diseases such as disease, dementia or malignancy can be performed. (6) By using the antisense 'oligonucleotide (RNA, DNA or a derivative thereof) of the present invention to suppress the transcription of the gene encoding the polypeptide of the present invention or the translation of mRNA, 46, 681 (1991), Bio / Technology, 9, 358 (1992)], such genes may be involved in the pathogenesis, such as diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, It can be used for the prevention and treatment of diseases such as allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease and malignant tumor.
上述のアンチセンス'オリゴヌクレオチドは、本発明のポリべプチドをコ一ドす る D N Aの塩基配列中の連続した 5 ~ 60塩基と相補的な配列を有するォリゴヌ クレオチド、 好ましくは本発明のポリぺプチドをコ一ドする D N Aの翻訳開始領 域にある 5〜60塩基と相補的な塩基配列を基にして設計 ·調製し、 生体内に投 与する。 The above-mentioned antisense 'oligonucleotide is preferably an oligonucleotide having a sequence complementary to 5 to 60 consecutive nucleotides in the nucleotide sequence of the DNA encoding the polypeptide of the present invention, preferably the polynucleotide of the present invention. It is designed and prepared based on the nucleotide sequence complementary to 5 to 60 bases in the translation initiation region of the DNA encoding the peptide, and is then administered to a living body.
本発明の DN Aを含有する医薬は、 上記 [5] の本発明のポリペプチドのァゴ 二ストまたはアン夕ゴニストの医薬製剤の調製法と同様な方法を用いて調製する ことができ、 調製された該医薬製剤を上記 [5] の場合と同様の方法で投与する ことができる。 The medicament containing the DNA of the present invention can be prepared by the same method as the above-mentioned [5], which is the same as the method for preparing a pharmaceutical preparation of an agonist or an agonist of the polypeptide of the present invention. The prepared pharmaceutical preparation can be administered in the same manner as in the above [5].
(7) 本発明の DNAを用い、 [2]記載の方法により本発明のポリペプチドを 取得することができる。 (7) The polypeptide of the present invention can be obtained by the method described in [2] using the DNA of the present invention.
本発明のポリぺプチドの用途としては、糖尿病、虚血性心疾患、高血圧、腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 E喿鬱病、 パーキンソン病、 痴呆、 感染症または悪性腫瘍等の疾患の治療薬または 予防薬が考えられる。 Uses of the polypeptides of the present invention include diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, E depression, Parkinson's disease, Remedies or prophylactics for diseases such as dementia, infectious diseases or malignancies are contemplated.
本発明のポリペプチドを含有する医薬は、 上記 [5] の本発明のポリペプチド のァゴニストまたはアン夕ゴニス卜の医薬製剤の調製法と同様な方法を用いて調 製することができ、 調製された該医薬製剤を上記 [5] の場合と同様の方法で投 与することができる。 The medicament containing the polypeptide of the present invention can be prepared and prepared by using the same method as the above-mentioned [5] for preparing the pharmaceutical preparation of the agonist or gonist of the polypeptide of the present invention. The pharmaceutical preparation can be administered in the same manner as in the above [5].
(8)本発明のオリゴヌクレオチドは一本鎖または二本鎖としてレトロウイルス、 アデノウイルス、 アデノ随伴ウィルス等のウィルスベクタ一、 その他のベクター に組み込んで遺伝子治療用べクタ一とし、 遺伝子治療に用いることができる。(8) the oligonucleotide of the present invention is a single-stranded or double-stranded retrovirus, It can be incorporated into viral vectors such as adenovirus and adeno-associated virus, and other vectors, and used as gene therapy vectors for gene therapy.
( 9 ) 本発明のポリペプチドを抗原として用い、 [ 3 ] 記載の方法により本発明 のポリぺプチドに対する抗体を製造することができる。 (9) An antibody against the polypeptide of the present invention can be produced by the method described in [3] using the polypeptide of the present invention as an antigen.
本発明のポリぺプチドに対する抗体を用いて、 本発明のポリぺプチドを免疫学 的に検出または定量することができる。 Using the antibody against the polypeptide of the present invention, the polypeptide of the present invention can be detected or quantified immunologically.
具体的には、 マイクロタイ夕一プレートを用いる E L I S A法、 酵素標識抗体 法や蛍光抗体法による免疫組織染色、 ウエスタンプロヅト法等を用いた検出法を あげることができる。 Specific examples include the ELISA method using a microtiter plate, immunohistochemical staining using an enzyme-labeled antibody method or a fluorescent antibody method, and a detection method using a western blot method.
具体的には、 液相中で本発明のポリぺプチドと反応する抗体のうち認識するェ ピト一プが異なる 2種類のモノクローナル抗体を用いたサンドィツチ E L I S A 法、 ί Ι等の放射性同位体で標識した本発明のポリぺプチドと本発明のポリぺプチ ドを認識する抗体を用いるラジオィムノアツセィ法等をあげることができる。 また、 本発明の抗体は病理組織切片を用いた免疫,組織染色にも利用できる。 本発明の抗体を用い、 健常者および被験者の細胞または組織に存在する本発明 のポリべプチドを免疫学的に検出または定量し、 その量を健常者と被験者とで比 較し、 発現量が変化しているかどうかを調べることにより、 被験者の糖尿病、 虚 血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆 症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴呆、 感染症または悪性 腫瘍等の病態の診断に用いることができる。 Specifically, sandwich ELISA using two types of monoclonal antibodies that recognize different polypeptides among antibodies that react with the polypeptide of the present invention in the liquid phase, labeling with radioisotopes such as ί Ι And a radioimmunoassay method using the polypeptide of the present invention and an antibody that recognizes the polypeptide of the present invention. The antibody of the present invention can also be used for immunological and tissue staining using pathological tissue sections. Using the antibody of the present invention, the polypeptide of the present invention present in cells or tissues of healthy subjects and subjects is immunologically detected or quantified, and the amount is compared between healthy subjects and subjects. By examining whether it has changed, the subject's diabetes, ischemic heart disease, hypertension, nephritis, Tengitis, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, It can be used for diagnosis of pathological conditions such as Parkinson's disease, dementia, infectious disease and malignant tumor.
また、 本発明の抗体を用いて、 各種病態モデル動物の組織および細胞に存在す る該ポリべプチドを免疫学的に検出または定量し、 正常動物と比較することによ り、病態における該ポリぺプチドの重要性を明らかにすることができる。さらに、 薬剤の有無による該ポリぺプチドの発現量を比較することにより薬剤を評価する ことができる。 Further, by using the antibody of the present invention to immunologically detect or quantify the polypeptide present in tissues and cells of various pathological model animals, and comparing with a normal animal, the polypeptide in the pathological state can be obtained. The importance of peptides can be clarified. Furthermore, a drug can be evaluated by comparing the expression level of the polypeptide depending on the presence or absence of the drug.
( 1 0 ) 本発明のポリペプチドの機能 (P D E活性) を阻害する抗体を投与する ことにより、 糖尿病、 虚血性心疾患、 高血圧、 腎炎、 滕炎、 潰瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴呆、 感染症または悪性腫瘍等の疾患の治療または予防が期待される。 (10) By administering an antibody that inhibits the function (PDE activity) of the polypeptide of the present invention, diabetes, ischemic heart disease, hypertension, nephritis, tengitis, ulcer, allergy, It is expected to treat or prevent diseases such as asthma, rheumatism, osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease or malignancy.
本発明の抗体を含有する医薬は、 上記 [ 5 ] の本発明のポリペプチドのァゴニ ストまたはアン夕ゴニストの医薬製剤の調製法と同様な方法を用いて調製するこ とができ、 調製された該医薬製剤を上記 [ 5 ] の場合と同様の方法で投与するこ とができる。 The medicament containing the antibody of the present invention can be prepared using the same method as the above-mentioned [5], which is the same as the method for preparing a pharmaceutical preparation of the polypeptide of the present invention or an agonist of the present invention. The pharmaceutical preparation can be administered in the same manner as in the above [5].
( 1 1 ) 本発明のァゴニスト、 アン夕ゴニストおよび本発明のポリペプチド遺伝 子の発現を調節する化合物は、 糖尿病、 虚血性心疾患、 高血圧、 腎炎、 塍炎、 潰 瘍、 アレルギー、 喘息、 リウマチ、 骨粗鬆症、 痛み、 不安症、 分裂病、 躁鬱病、 パーキンソン病、 痴呆、 感染症または悪性腫瘍等の疾患の治療または予防に用い ることが期待される。 (11) The compounds that regulate the expression of the agonist, angiogonist of the present invention and the polypeptide gene of the present invention include diabetes, ischemic heart disease, hypertension, nephritis, nephritis, ulcer, allergy, asthma, rheumatism. It is expected to be used for the treatment or prevention of diseases such as osteoporosis, pain, anxiety, schizophrenia, manic depression, Parkinson's disease, dementia, infectious disease and malignancy.
本出願が主張する優先権の基礎となる 2 0 0 0年 3月 7日出願の特願 2 0 0 0 — 6 1 4 6 4及び 2 0 0 0年 7月 1 0日出願の特願 2 0 0 0— 2 0 8 6 1 0に記 載されている内容は全て本明細書中に開示として引用するものとする。 Patent application for application filed on March 7, 2000, which forms the basis of the priority claimed in the present application 200 0 — 6 1 4 6 4 and Japanese application for patent application, filed on July 10, 2000 2 All the contents described in 0 0 0—2 0 8 6 10 shall be cited as disclosure in this specification.
以下の実施例により本発明を具体的に例示するが、 本発明の範囲は実施例によ つて限定されることはない。 実施例 The present invention is specifically illustrated by the following examples, but the scope of the present invention is not limited by the examples. Example
実施例 1 : PDE活性を有する蛋白質をコードするヒト c D N A断片のクロ一ンィ匕 ( 1 ) HepG2細胞由来 c D N Aライブラリ一の作製 Example 1: Cloning of a human cDNA fragment encoding a protein having PDE activity (1) Preparation of a cDNA library derived from HepG2 cells
ヒト肝細胞株 HepG2から、 文献 (J. Sambrook, E. F. Fritsch & T. Maniatis, Molecular Cloning Second edition, Cold Spring Harbor Laboratory Press 1989) に記載されている Cytoplasmic RNA抽出法および PolyA( + )RNA精製法に準じ mRNAを 抽出し、精製した。それそれの polyA( + )RNAよりオリゴキヤヅプ法〔L Maruyama and Sr Sugano, Gene, 138, 171 (1994)〕 により c D NAライブラリーを作製した。 Oligo-cap linker (配列番号 3 )および 01 igo dT primer (配列番号 4 )を用いて、 文献 〔鈴木 ·菅野,蛋白質 核酸酵素, 1, 603 (1996)、 Y. Suzuki et al.5 Gene, 2003 149 (1997)〕 に従って BAP (Bacterial Alkaline Phosphatase) 処理、 TAPCytoplasmic RNA extraction and PolyA (+) RNA purification described in the literature (J. Sambrook, EF Fritsch & T. Maniatis, Molecular Cloning Second edition, Cold Spring Harbor Laboratory Press 1989) from human hepatocyte cell line HepG2. The corresponding mRNA was extracted and purified. A cDNA library was prepared from each polyA (+) RNA by an oligocap method [L Maruyama and Sr Sugano, Gene, 138, 171 (1994)]. Using Oligo-cap linker (SEQ ID NO: 3) and 01 igo dT primer (SEQ ID NO: 4), literature [Suzuki Sugano, Protein Nucleic Acid Enzyme, 1, 603 (1996), Y.Suzuki et al. 5 Gene, 200 3 149 (1997)] BAP (Bacterial Alkaline Phosphatase) treatment, TAP
(Tobacco Acid Pyrophosphatase) 処理、 RMライゲ一シヨン、 第一鎖 cDNAの 合成と Aの除去を行った。 次いで、 5'末端側と 3'末側の PCRプライマ一 (配列番 号 5および 6 ) を用いた PClUpolymerase chain reaction)により 2本鎖 c DNAに 変換した後、 制限酵素 ilで切断した。 該 cDNAを ΠΙで切断したベクタ一 P E18SFL3 (GenBank AB009864, Expression vector, 3392 bp) に組み込み、 c D N Aライブラリ一を作製した。 c DNAは発現が可能な方向に組み込んだ。 (Tobacco Acid Pyrophosphatase) treatment, RM ligation, synthesis of first-strand cDNA, and removal of A. Next, the DNA was converted into double-stranded cDNA by a PClU polymerase chain reaction using PCR primers (SEQ ID NOS: 5 and 6) at the 5 'end and 3' end, and then cut with the restriction enzyme il. The cDNA was inserted into a vector PE18SFL3 (GenBank AB009864, Expression vector, 3392 bp) cut with ΠΙ to prepare a cDNA library. The cDNA was incorporated in a direction allowing expression.
(2) ランダムシークェンス (2) Random sequence
上記 (1) で調製した cDNAライプラリーの各大腸菌クローンから常法に従 つてプラスミ ド DNAを取得し、 各プラスミ ドが含有する cDN Aの 末端の塩 基配列を決定した。 塩基配列の決定は、 キット (BigDye Terminator Cycle Sequencing FS Ready Reaction Kit, PE Biosystems社製) と DNAシークェンサ一 (ABI PRISM 377, PE Biosystems社製) を用いて行った。 プライマ一としては、 配列番号 7および 8に示す合成 D N Aを使用した。 Plasmid DNA was obtained from each Escherichia coli clone of the cDNA library prepared in (1) above according to a conventional method, and the nucleotide sequence of the terminal of cDNA contained in each plasmid was determined. The nucleotide sequence was determined using a kit (BigDye Terminator Cycle Sequencing FS Ready Reaction Kit, manufactured by PE Biosystems) and a DNA sequencer (ABI PRISM 377, manufactured by PE Biosystems). As the primer, the synthetic DNA shown in SEQ ID NOs: 7 and 8 was used.
(3) N末領域のクローン化と相同性検索ソフトウヱァを用いた解析 (3) Cloning of N-terminal region and analysis using homology search software
得られた塩基配列についてはヒト PDE10A (GenBank:AB020593) の遺伝子配列情 報を基にブラストサーチ相同性検索ソフトウヱァを用いて解析し、 相同性の認め られる配列を見出した。 該クローンの全塩基配列を決定した結果、 プラスミ ド hepl0314には配列番号 2に記載された塩基配列の塩基番号 406番目からの約 2. Ikbの c D N Aが含まれ、 配列番号 1に記載された新規ポリぺプチド中の 339ァ The obtained base sequence was analyzed using blast search homology search software based on the gene sequence information of human PDE10A (GenBank: AB020593), and a sequence showing homology was found. As a result of determining the entire nucleotide sequence of the clone, plasmid hepl0314 contained a cDNA of about 2.Ikb from base number 406 of the nucleotide sequence described in SEQ ID NO: 2, and was described in SEQ ID NO: 1. 339 a in new polypeptides
、 ,
ヽノ酸がコードされていた Penic acid was coded
該配列情報をもとに配列番号 9および配列番号 10に記載された DNAブラィマ —を設計し、 Human Pancreas Marathon-Ready cDNAキット(クロンテツク社製 )を用いて、 以下に示す方法により. N末領域を PCB;増幅した。 Based on the sequence information, a DNA polymerase described in SEQ ID NO: 9 and SEQ ID NO: 10 was designed, and the following method was used using the Human Pancreas Marathon-Ready cDNA kit (manufactured by Klontech) by the method shown below. The PCB was amplified.
-即ち、 Human Pancreas Marathon- Ready cDNA 2 L、 配列番号 9および API ( キヅトに添付)のプライマ一各々0.2〃mol/L、各成分 200〃11101 の dNTP(dATP、dGTP 、 dCTPs dTTP)混合液、 Taq Goldポリメラ一ゼ(パーキンエルマ一社製) 2.5単位お よび l x Taq Gold緩衝液を含む反応溶液 50 /Lを用い、 下記条件下で PCRを行なつ た。 -That is, 2 L of Human Pancreas Marathon-Ready cDNA, 0.2 mol / L of each of the primers of SEQ ID NO: 9 and API (attached to kit), dNTP (dATP, dGTP, dCTPs dTTP) mixture of 200-11101 each component, Taq Gold Polymerase (PerkinElmer) 2.5 units PCR was carried out under the following conditions using a reaction solution (50 / L) containing lx Taq Gold buffer solution.
即ち、 TaKaRa PCR Thermal Cycler 480を用い、 95°Cで 10分間加熱後、 94°Cで 30 秒間、 60°Cで 2分間の工程を 1サイクルとして 30サイクル行ない、更に 72°Cで 8分間 加熱した。続いて、得られた該 PCR反応液の 100倍希釈液 2 zL、 配列番号 1 0およ び AP2(キヅトに添付)のプライマ一各々 0.2 mol/L、 各成分 200〃mol/Lの dNTP ( dATPs dGTP、 dCTP、 dTTP) 混合液、 Taq Goldポリメラ一ゼ(パ キンエルマ一社製 )2.5単位ぉょび1 1&9 01(1緩衝液を含む反応溶液5() ^を用ぃて、 上記方法で同 様に PCRを行なった。 . That is, using TaKaRa PCR Thermal Cycler 480, heat at 95 ° C for 10 minutes, perform 30 cycles at 94 ° C for 30 seconds and 60 ° C for 2 minutes as one cycle, and further heat at 72 ° C for 8 minutes did. Subsequently, 2 zL of a 100-fold diluted solution of the PCR reaction solution obtained, primers of SEQ ID NO: 10 and AP2 (attached to the kit) were each 0.2 mol / L, and each component was 200 mol / L dNTP ( dATP s dGTP, dCTP, dTTP) mixed solution, Taq Gold polymerase (manufactured by Pakin Elmer) 2.5 units, and 1 1 & 9 01 (reaction solution 5 () ^ containing 1 buffer solution) PCR was carried out in the same manner.
得られた該 PCR反応液より を分取し、 ァガロース電気泳動により約 0.7kbの MA断片が増幅されたことを確認後、 QIAEX I I Gel Extraction Kit (QIAGEN社製) を用いてマニュアルに従って DNA断片を精製した。 The obtained PCR reaction solution was fractionated, and after confirming that an approximately 0.7 kb MA fragment was amplified by agarose gel electrophoresis, the DNA fragment was separated using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual. Purified.
上記で回収した DNA断片 50ngおよび pT7Blue T- Vector(Novagen社製) 50ngを DNA Ligation Kit Ver. 2 (宝酒造社製) を用いてマニュアルに従って結合反応を行な つた。 該反応により得られた組み換えプラスミ ド DNAを用いて大腸菌 J M109株を 形質転換し、 常法によりプラスミ ド pT- 1を得た。 50 ng of the DNA fragment collected above and 50 ng of pT7Blue T-Vector (Novagen) were subjected to a binding reaction using DNA Ligation Kit Ver. 2 (Takara Shuzo) according to the manual. Escherichia coli JM109 strain was transformed with the recombinant plasmid DNA obtained by the reaction, and plasmid pT-1 was obtained by a conventional method.
プラスミド ρΤ-1に含まれる DNA断片の塩基配列を常法によって決定することに より、挿入 DNA断片は揷入断片中の Cla I部位で hepl0314の Claェ部位と連結可能で あることが判明した。 連結した塩基配列を配列番号 2に記載した。 該配列には、 配列番号 1に記載された新規ポリぺプチドがコ一ドされていた。 By determining the nucleotide sequence of the DNA fragment contained in plasmid ρΤ-1 by a conventional method, it was found that the inserted DNA fragment could be ligated to the Cla I site of hepl0314 at the Cla I site in the inserted fragment. The linked base sequence is shown in SEQ ID NO: 2. The novel polypeptide encoded in SEQ ID NO: 1 was encoded in the sequence.
また、 既知タンパク質配列データベースに対して、 該アミノ酸配列の Sndth& Waterman検索を行なつたところ、 PDE5A、 PDE10Aフアミリーとの相同性が強く検出 された。 そこで、 各々のファミリ一からヒト PDE5Aァミノ酸配列( GenBank: CAA06170), ヒト PDE10Aアミノ酸配列(GenBank: BM78034)を選択しァライメント を作製した。図 1にヒト PDE5A配列、図 2にヒト PDE10A配列とのァライメント結果 を示す。 PDEに共通したアミノ酸配列である HDXXHXXXXN配列(配列番号 1 4 ) も認 められた(図 1、 図 2の下線部)。 実施例 2 :ノーザンハイプリダイゼ一シヨンによる mRNAの発現解析 実施例 1で決定した塩基配列の情報を基に配列番号 1 1に示される 55端側 MA プライマ一と配列番号 1 0に示される 3 '端側 DNAプライマ一を設計し、合成した。 得られた 2種類のブラィマー各々 0.2〃mol/L、 実施例 1のプラスミド Further, when a Sndth & Waterman search of the amino acid sequence was performed on the known protein sequence database, homology with PDE5A and PDE10A families was detected strongly. Therefore, human PDE5A amino acid sequence (GenBank: CAA06170) and human PDE10A amino acid sequence (GenBank: BM78034) were selected from each family, and an alignment was prepared. Figure 1 shows the results of the alignment with the human PDE5A sequence, and Figure 2 shows the results of the alignment with the human PDE10A sequence. An HDXXHXXXXN sequence (SEQ ID NO: 14), which is an amino acid sequence common to PDEs, was also recognized (underlined parts in FIGS. 1 and 2). Shown in 5 5 end side MA primer first and SEQ ID NO: 1 0 shown in the Northern High Priestess die peptidase one Chillon sequence based on the information of nucleotide sequence determined by expression analysis Example 1 of mRNA by No. 1 1: Example 2 A 3 'end DNA primer was designed and synthesized. 0.2 mol / L of each of the two types of obtained primers, plasmid of Example 1
(hepl0314)10ng, 各成分 200〃mol/Lの dNTP (dATP、 dGTP, dCTP、 dTTP) 混合液、 (hepl0314) 10ng, each component 200〃mol / L dNTP (dATP, dGTP, dCTP, dTTP) mixture,
ExTaqポリメラーゼ (宝酒造社製) 2.5単位および I XExTaq緩衝液を含む反応溶液 50 /Lを用い、 下記条件下で PCRを行なった。 PCR was performed under the following conditions using a reaction solution (50 / L) containing 2.5 units of ExTaq polymerase (Takara Shuzo) and IXExTaq buffer.
即ち、 TaKaRa PCR Thermal Cycler 480を用い、 95°Cで 3分間加熱後、 94°Cで 1 分間、 60°Cで 1分間の工程を 1サイクルとして 25サイクル行ない、更に 72°Cで 8分間 加熱した。 In other words, using a TaKaRa PCR Thermal Cycler 480, heat at 95 ° C for 3 minutes, perform 25 cycles of 1 cycle at 94 ° C for 1 minute and 1 minute at 60 ° C, and further heat at 72 ° C for 8 minutes did.
得られた該 PCR反応液より 5〃Lを分取し、 ァガロ一ス電気泳動により約 0.2kbの MA断片が増幅されたことを確認後、 QIAEX II Gel Extraction Kit (QIAGEN社製) を用いてマニュアルに従って DNA断片を精製した。 From the obtained PCR reaction solution, 5 L was taken, and after confirming that the MA fragment of about 0.2 kb was amplified by agarose gel electrophoresis, using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN), The DNA fragment was purified according to the manual.
—方、 pBluescript II KS (-) (STRATAGENE社製 )2〃gを 50腿 ol/Lトリス—塩酸 (pH7.5)、 10画 ol/L塩化マグネシウム、 lmmol/Lジチオスレィ トール (以下、 DTT と略記する)、 100mmol/L塩化ナトリウムからなる緩衝液 50〃Lに溶解し、 10単位 の^ RV (宝酒造社製)を加え、 37°Cで 3時間消化反応を行った。 フヱノ一ル抽出と エタノール沈殿の後、 該 DM断片を 50腿 ol/Lトリス—塩酸 (pH9.0)、 1顧 ol/L塩化 マグネシウムからなる緩衝液 50〃Lに溶解し、 0.5単位のアル力リホスファタ一ゼ — 2 μg of pBluescript II KS (-) (manufactured by STRATAGENE) in 50 t ol / L Tris-hydrochloric acid (pH 7.5), 10 fractions ol / L magnesium chloride, lmmol / L dithiothreitol (hereinafter referred to as DTT This was dissolved in 50 L of a buffer solution containing 100 mmol / L sodium chloride, and 10 units of ^ RV (manufactured by Takara Shuzo Co., Ltd.) were added, followed by digestion at 37 ° C for 3 hours. After phenol extraction and ethanol precipitation, the DM fragment was dissolved in 50 μl of 50 μl / L Tris-hydrochloric acid (pH 9.0), 1 μl / L magnesium chloride buffer, and 0.5 units of alcohol was added. Force phosphatase
(以下、 BAPと略記する) . C75) (宝酒造社製)を加えて 60°Cで 30分間脱リ ン酸化反応を行った。該反応液をァガロース電気泳動し、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用いて pBluescript II KS (-)由来の!^ RV- BAP処理断片(3.0kb) を精製した。 (Hereinafter abbreviated as BAP). C75) (Takara Shuzo Co., Ltd.) was added, and a dephosphorylation reaction was performed at 60 ° C for 30 minutes. The reaction solution was subjected to agarose electrophoresis, and pBluescript II KS (-)-derived! Was used using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN). ^ The RV-BAP treated fragment (3.0 kb) was purified.
-上記で回収した DNA断片 50ngおよび pBluescriptll KS (-)由来の V-BAP処理 断片を DNA Blunting iat (宝酒造社製) を用いてマニュアルに従って結合反応を行 つた。 該反応により得られた組み換えプラスミ ド DNAを用いて大腸菌 J M109株を 形質転換し、 常法によりプラスミド p200を得た。 ' -A binding reaction was performed according to the manual using 50 ng of the DNA fragment collected above and the V-BAP-treated fragment derived from pBluescriptll KS (-) using DNA Blunting iat (Takara Shuzo). Using the recombinant plasmid DNA obtained by the reaction, E. coli JM109 strain was transformed. After transformation, plasmid p200 was obtained by a conventional method. '
プラスミ ド p200の 2〃gを 50顏 ol/L トリス—塩酸 (pH7.5)、 10蘭 ol/L塩化マグネ シゥム、 1蘭 ol/L DTT、 100霞 ol/L塩化ナトリゥムからなる緩衝液 50〃Lに溶解し、 10単位の!^ RI (宝酒造社製)と (宝酒造社製)を加え、 37°Cで 3時間消化反応を 行った。フヱノ一ル抽出とエタノール沈殿の後、該 DNA断片を DNA Blunting Kit (宝 酒造社製) を用いてマニュアルに従って結合反応を行った。 該反応により得られ た組み換えプラスミ ド DNAを用いて大腸菌 J M109株を形質転換し、 常法により Northern解析プロ.一ブ作製用プラスミ ド p200- EBを調製した。該プラスミ ドの構築 過程および制限酵素地図を図 3に示す。 A buffer solution consisting of 50 μl / L Tris-HCl (pH 7.5), 10 orchid ol / L magnesium chloride, 1 orchid ol / L DTT, and 100 hol / L sodium chloride 50 μl of plasmid p200溶解 L, dissolved in 10 units of! ^ RI (Takara Shuzo) and (Takara Shuzo), and digested at 37 ° C for 3 hours. After phenol extraction and ethanol precipitation, the DNA fragment was subjected to a binding reaction using a DNA Blunting Kit (Takara Shuzo) according to the manual. Escherichia coli JM109 strain was transformed using the recombinant plasmid DNA obtained by the reaction, and a plasmid p200-EB for preparing a Northern analysis probe was prepared by an ordinary method. Figure 3 shows the construction process and restriction map of the plasmid.
調製したプラスミ ド p200- EB 10〃gを 10丽 ol/L トリス—塩酸(pH7.5)、 10mmol/L 塩化マグネシウム、 50蘭 ol/L塩化ナトリウム、 1雇 ol/L DTTからなる緩衝液 50 L に溶解し、 30単位の ii lIi (宝酒造社製)を加え、 37°Cで 6時間消化反応を行った。 該反応液を用いてフエノール—クロ口ホルム抽出、 エタノール沈殿を行い、 DNA 断片を回収した。' ' A buffer solution consisting of 10 µg of the prepared plasmid p200-EB at 10 µl / L Tris-hydrochloric acid (pH 7.5), 10 mmol / L magnesium chloride, 50 orchids ol / L sodium chloride, and 1 ol / L DTT 50 The mixture was dissolved in L, 30 units of IIIi (Takara Shuzo) was added, and the digestion reaction was performed at 37 ° C for 6 hours. Using the reaction mixture, phenol-mouth opening extraction and ethanol precipitation were performed to recover DNA fragments. ''
該 DNA断片の l gを、 40蘭 ol/Lトリス—塩酸 (pHS.O) 、 6讓 ol/L塩化マグネシ ゥム、 2誦 ol/Lスペルミジン、 10mfflol/L DTTヽ 1雇 ol/L ATP、 lmmol/L CTP. 1翻 ol/L GTPs 0.65舰 ol/L UTP、 0.35顧 ol/L ディゴキシゲニン-; -ϋΤΡを含む緩衝液 50 zL に溶解し、 40単位の T7 RNAポリメラーゼ (ぺーリンガ一マンハイム社製) を添カロ し、 37°Cで 2時間 in vitro転写反応を行なった。 Lg of the DNA fragment was converted into 40 orchid ol / L Tris-hydrochloride (pHS.O), 6 ol / L magnesium chloride, 2 ol / L spermidine, 10 mfflol / L DTT ヽ 1 ol / L ATP, lmmol / L CTP. 1 ol / L GTPs 0.65 舰 ol / L UTP, 0.35 ol / L digoxigenin-; -ϋΤΡ-dissolved in 50 zL of buffer, 40 units of T7 RNA polymerase (Peringa-Mannheim ) And in vitro transcription reaction was performed at 37 ° C for 2 hours.
反応後、 得られた該反応液より、 エタノール沈殿によりディゴキシゲニン標識 cRNAプロ一ブを回収した。 After the reaction, a digoxigenin-labeled cRNA probe was recovered from the obtained reaction solution by ethanol precipitation.
該プローブを用いて、 ヒト心臓、 脳、 胎盤、 肺、 肝臓、 骨格筋、 腎臓、 膝臓の poly(A)+ RNAフィル夕一 (Human Multiple Tissue Northern Blotsのライル夕一 (Clontech社製)〕 とヒト心臓、 脳、 肝臓、 滕臓、 胎盤、 肺の poly(A)+ RNAフィル ター Human Normal Tissue mRNA blot I (Normalized)のフィル夕一(東洋紡社製 )〕 に対して、 以下に示す条件に従いノーザンハイブリダィゼーシヨンを行った。 該フィル夕一を、 50%ホルムアミ ド、 5倍濃度の SSC (1倍濃度の SSCの組成は、 150雇 ol/L塩化ナトリゥムおよび 15画 ol/Lクェン酸ナトリウムよりなる)、 0.5% ドデシル硫酸ナトリウム (以下、 SDSと略記する) 、 2%ブロッキング試薬 (ベ一 リンガーマンハイム社製) 、 O. lmg/mLサケ精子 DNAを含む緩衝液 (以下、 ハイブ リダィゼ一シヨンバッファーと略記する)中に浸漬し、 70°Cで 2時間プレハイプリ ダイゼ一シヨンを行なった。 Using this probe, poly (A) + RNA file of human heart, brain, placenta, lung, liver, skeletal muscle, kidney, and knee (Rile Yuichi of Human Multiple Tissue Northern Blots (Clontech)) And human heart, brain, liver, lentin, placenta, and lung poly (A) + RNA filter Human Normal Tissue mRNA blot I (Normalized) filter (Toyobo Co., Ltd.)] The hybrid was subjected to 50% formamide, 5 times concentration of SSC (1 times concentration of SSC was 150 ol / L sodium chloride and 15 ol / L sodium citrate), 0.5% sodium dodecyl sulfate (hereinafter abbreviated as SDS), 2% blocking reagent (manufactured by Behringer Mannheim), O.lmg / mL salmon sperm DNA was immersed in a buffer solution (hereinafter abbreviated as hybridization buffer), and prehybridization was performed at 70 ° C. for 2 hours.
'該フィル夕一を、上述のディゴキシゲニン標識 cMAプローブが 1 g/mLの濃度 で溶解しているパイブリダイゼ一ションバヅファ一に浸漬し、 70°Cで 15時間ハイ ブリダィゼーシヨンを行なった。 The film was immersed in a hybridization buffer in which the above-mentioned digoxigenin-labeled cMA probe was dissolved at a concentration of 1 g / mL, and hybridization was performed at 70 ° C. for 15 hours.
該フィル夕一を 2倍濃度の SSC、 0.1%SDSよりなる緩衝液中で 70°C、 10分間浸漬 する条件で 1回、 0.2倍濃度の SSC、 0.1%SDSよりなる緩衝液中で 70°C、 30分間浸漬 する条件で 3回洗浄した。 The film is immersed once in a buffer consisting of 2 times concentration SSC and 0.1% SDS at 70 ° C for 10 minutes, and then 70 ° C in a buffer consisting of 0.2 times concentration SSC and 0.1% SDS once. C, washed three times under conditions of immersion for 30 minutes.
該フィル夕一を 100腿 ol/Lマレイン酸 (pH7.5) 、 150雇 ol/L塩化ナトリウムよ り,なる緩衝液 (以下、 DIG I緩衝液と略記する) 中で室温、 15分間浸漬する条件 で 2回洗浄し、 SDSを除去した。 The film is immersed for 15 minutes at room temperature in a buffer solution (hereinafter abbreviated as DIG I buffer solution) consisting of 100 t ol / L maleic acid (pH 7.5) and 150 ol / L sodium chloride. Washing was performed twice under the conditions to remove SDS.
該フィルターを 100mmol/L マレイン酸 (pH7.5) 、 150腿 ol/L 塩化ナトリウム、 1% ブロッキング試薬よりなる緩衝液 (以下、 DIGI I緩衝液と略記する)に浸漬し、 1時間室温にてプロヅキングを行った。 The filter was immersed in a buffer solution consisting of 100 mmol / L maleic acid (pH 7.5), 150 t ol / L sodium chloride, and 1% blocking reagent (hereinafter abbreviated as DIGI I buffer solution), and left at room temperature for 1 hour. Proking was performed.
該フィル夕一を、 DIGII緩衝液で 10000倍に希釈したアル力リホスファタ一ゼ標 識抗ディゴキシゲニン抗体 Fabフラグメント (ベ一リンガ一マンハイム社製)溶液 中に浸潰し、 室温で 30分間抗原抗体反応を行った。 The filter was immersed in a solution of anti-digoxigenin antibody Fab fragment (manufactured by Boehringer-Mannheim) diluted 10,000 times with DIGII buffer, and the antigen-antibody reaction was performed at room temperature for 30 minutes. went.
—該フィル夕一を DIG I緩衝液で室温、 30分間浸漬する条件で 3回洗浄し、 余分な 抗体を除去した後、 100mmol/L トリス—塩酸 (pH9.0) 、 100顧 ol/L塩化ナトリウ ム、 50腿 ol/L塩化マグネシウムからなる緩衝液 (以下、 DIGIII緩衝液と略記する ) に 5分間浸漬し平衡化した。 — The filter was washed three times with DIG I buffer at room temperature for 30 minutes to remove excess antibody, and then 100 mmol / L Tris-HCl (pH 9.0), 100 mL / L chloride were added. It was immersed in a buffer solution containing sodium and 50 t ol / L magnesium chloride (hereinafter abbreviated as DIGIII buffer solution) for 5 minutes to equilibrate.
該フィル夕一を、 DIGIII緩衝液で 100倍に希釈した発光基質 CDP- Star (ベーリン ガーマンハイム社製) 溶液中に室温で 15分間浸潰し、 シグナルを発光させ、 CCD カメラ (富士写真フィルム社製) で検出した。 結果を図 4に示す。腾臓において約 2. s認められた The film is immersed in a luminescent substrate CDP-Star (Boehring-Germanheim) solution diluted 100 times with DIGIII buffer at room temperature for 15 minutes to emit a signal, and a CCD camera (Fuji Photo Film Co., Ltd.) ). Fig. 4 shows the results. Approximately 2. s was found in the kidney
実施例 3 : GST融合蛋白質発現大腸菌を用いた PDE活性の測定 Example 3 Measurement of PDE activity using E. coli expressing GST fusion protein
A . GST融合蛋白質発現用プラスミ ドの構築 A. Construction of plasmid for expression of GST fusion protein
' 実施例 1で取得した MA断片について、 PDE活性を有するアミノ酸配列をコード していることを確認するため、 グル夕チオン Sトランスフェラ一ゼ(以下、 GSTと略 記する)融合蛋白質発現大腸菌を作製した。 'To confirm that the MA fragment obtained in Example 1 encodes an amino acid sequence having PDE activity, E. coli expressing a glutathione S transferase (hereinafter abbreviated as GST) fusion protein was used. Produced.
実施例 1で決定した塩基配列の情報をもとに配列番号 1 2に示きれる 5 '端側 DNAブラィマーと配列番号 1 3に示される 3,端側 DNAブラィマ一を設計し、.合成し Based on the information on the nucleotide sequence determined in Example 1, a 5'-end DNA primer shown in SEQ ID NO: 12 and a 3, DNA-end DNA primer shown in SEQ ID NO: 13 were designed and synthesized.
,し ,
得られた 2種類のプライ'マ一各々 0.2〃mol/L、 '実施例 1のプラスミド The resulting two types of primers, each at 0.2 mol / L, the plasmid of Example 1
(hepl0314)10ngs 各成分 ZOOAimol/Lの dNTP (dATP、 dGTP、 dCTP、 dTTP) 混合液、 PLATINUM Pfx DNAポリメラーゼ(ライフテツク社製) 2.5単位および l x PLATINUM - PfxDNAポリメラ一ゼ緩衝液を含む反応溶液 50 Lを用い、下記条件下で PCRを行つ た。 (hepl0314) 10 ngs Each component ZOOAimol / L dNTP (dATP, dGTP, dCTP, dTTP) mixture, PLATINUM Pfx DNA polymerase (manufactured by Lifetech) 2.5 units and lx PLATINUM-Pfx DNA polymerase buffer containing 50 L of reaction solution PCR was carried out under the following conditions.
即ち、 サーマルサイクラ一 PTC- 200(MJリサ一チ社製)を用い、 95°Cで 3分間加熱 後、 94°Cで 1分間、 60°Cで 1分間の工程を 1サイクルとして 25サイクル行い、 更に 72 °Cで 8分間加熱した。 That is, using a Thermal Cycler PTC-200 (manufactured by MJ Risaichi Co., Ltd.), heat at 95 ° C for 3 minutes, and then perform 25 cycles of 94 ° C for 1 minute and 60 ° C for 1 minute. The mixture was further heated at 72 ° C for 8 minutes.
得られた該 PCR反応液より を分取し、 ァガロース電気泳動により約 l.Okbの DNA断片が増幅されたことを確認した。 フエノ一ル抽出とェ夕ノ一ル沈殿の後、 20腿 ol/L トリス一塩酸 (pH7.5)、 10腿 ol/L塩化マグネシウム、 1雇 ol/L DTT、 100画 ol/L塩化力リウムからなる緩衝液 50〃Lに溶解し、 10単位の iHI (宝酒造社 製)を加え、 37°Cで 3時間消化反応を行った。 フエノール抽出とエタノール沈殿の 後、 該 DNA断片を 10丽 ol/L トリス一塩酸 (pH7.5)、 10腿 ol/L 塩ィ匕マグネシウム、 limol/L DTT、 50画 ol/L塩化ナトリウム、 0.01% ゥシ血清アルブミンからなる緩 衝液 50〃Lに溶解し、 10単位の 1 (宝酒造社製)を加えて 37°Cで 3時間消化反応を 行った。 該反応液をァガロース電気泳動し、 QIAEX II Gel Extraction Kit(QIAGEN 社製)を用いて I— I断片 (l. Okb)を精製した。 ' The obtained PCR reaction solution was fractionated, and it was confirmed by agarose electrophoresis that a DNA fragment of about l.Okb was amplified. After phenol extraction and ethanol precipitation, 20 t ol / L tris-hydrochloric acid (pH 7.5), 10 t ol / L magnesium chloride, 1 hi ol / L DTT, 100 t ol / L chloride After dissolving in 50 μL of a buffer solution containing lithium, 10 units of iHI (manufactured by Takara Shuzo) were added, and digestion reaction was performed at 37 ° C. for 3 hours. After phenol extraction and ethanol precipitation, the DNA fragment was reconstituted with 10 l / l Tris-HCl (pH 7.5), 10 l / l magnesium chloride, limol / L DTT, 50 l / l sodium chloride, 0.01 l / l Dissolve in 50 μL of buffer solution consisting of 10% serum albumin, add 10 units of 1 (Takara Shuzo) and incubate the digestion reaction at 37 ° C for 3 hours. went. The reaction solution was subjected to agarose electrophoresis, and the I-I fragment (1. Okb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN). '
一方、 プラスミド pVL1393 (ファーミンジェン社製) 2〃gを 20誦 ol/L トリス一塩 酸 (pH7.5)、 10顧 ol/L塩化マグネシウム、 1纖 ol/L DTTヽ 100雇 ol/L塩化カリウム からなる緩衝液 こ溶解し、 10単位の^ iHiを加え、 37°Cで 3時間消化反応を行 つた d フエノール抽出とエタノール沈殿の後、 該 DNA断片を 10腿 ol/L トリス一塩 酸 (pH7.5)、 10雇 ol/L塩化マグネシウム、 1醒 ol/L DTT、 50腿 ol/L塩化ナトリウ ム、 0.01% ゥシ血清アルブミンからなる緩衝液 に溶解し、 10単位の 1を 加えて 37°Cで 3時間消化反応を行った。 該反応液をァガロース電気泳動し、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用いて HI— I断片(9.6kb)を精製し た。 On the other hand, 2 〃g of plasmid pVL1393 (Pharmingen) 20 ol / L tris monohydrochloride (pH 7.5), 10 ol / L magnesium chloride, 1 fiber ol / L DTT ヽ 100 employment ol / L Buffer solution consisting of potassium chloride Dissolve, add 10 units of ^ iHi, perform digestion reaction at 37 ° C for 3 hours d After phenol extraction and ethanol precipitation, transfer the DNA fragment to 10 t ol / L Tris monosalt Dissolve in a buffer consisting of acid (pH 7.5), 10 ol / L magnesium chloride, 1 ol / L DTT, 50 t ol / L sodium chloride, and 0.01% ゥ serum albumin. In addition, digestion reaction was performed at 37 ° C for 3 hours. The reaction solution was subjected to agarose electrophoresis, and an HI-I fragment (9.6 kb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
上記で回収した PCR増幅 1 -Xba I断片( 1 · 0kb)50ngおよび pVL1393由来の 50 ng of the PCR-amplified 1-Xba I fragment (1.0 kb) recovered above and pVL1393-derived
1断片(9.6kb)を DNA Ligation Kit Ver.2(宝酒造社製) を用いてマ二 ュアルに従って結合反応を行った。該反応により得られた組み換えプラスミド DNA を用いて大腸菌 J M109株を形質転換し、常法によりプラスミ ド pPDE- 1393を得た。 該プラスミ ド pPDE- 1393の 2〃gを 50腿 ol/L トリスー塩酸 (pH7.5)、 10顧 ol/L塩 化マグネシウム、 1画 ol/L DTT、 100腿 ol/L塩化ナトリウム、 0.01%ゥシ血清アル ブミン、 O. O Triton X- 100からなる緩衝液 に溶解し、それそれ 10単位の £k ェおよび Iを加えて 37°Cで 3時間消化反応を行った。 該反応液をァガロース電 気泳動し、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用いて —MI断片 (l. Okb)を精製した。 One fragment (9.6 kb) was subjected to a binding reaction using DNA Ligation Kit Ver. 2 (Takara Shuzo) according to the manual. The recombinant plasmid DNA obtained by the reaction was used to transform E. coli JM109 strain, and plasmid pPDE-1393 was obtained by a conventional method. 2 μg of the plasmid pPDE-1393 was added to 50 t ol / L Tris-hydrochloride (pH 7.5), 10 t ol / L magnesium chloride, 1 t ol / L DTT, 100 t ol / L sodium chloride, 0.01% The solution was dissolved in a buffer solution consisting of serum albumin and O. O Triton X-100, and 10 units of Kk and I were added to each, followed by digestion at 37 ° C for 3 hours. The reaction solution was subjected to agarose electrophoresis, and the -MI fragment (l. Okb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
実施例 1で取得したプラスミド pT- 1 を 50顧 ol/Lトリス一塩酸 (pH7.5)、 10腿 ol/L塩化マグネシウム、 1腦 ol/L DTT、 100腿 ol/L塩ィ匕ナトリウムからなる 緩衝液 50〃Lに溶解し、 それそれ 10単位の l£ Vおよび £ 1を加えて 37°Cで 3時間 消化反応を行った。 該反応液をァガロース電気泳動し、 QIAEX II Gel Extraction K (QIAGEN社製)を用いて V— £i^ I (0.3kb)を精製した。 Plasmid pT-1 obtained in Example 1 was prepared from 50 ol / L Tris-monohydrochloride (pH 7.5), 10 t ol / L magnesium chloride, 1 t ol / L DTT, and 100 t ol / L sodium chloride. The resulting solution was dissolved in 50 L of a buffer solution, and 10 units of l £ V and £ 1 were added thereto, and the digestion reaction was carried out at 37 ° C for 3 hours. The reaction solution was subjected to agarose electrophoresis, and V- £ i ^ I (0.3 kb) was purified using QIAEX II Gel Extraction K (manufactured by QIAGEN).
一方、 プラスミ ド pGEX- 5X- 1(フアルマシア社製) 2〃gを 33舰 ol/L トリス—塩酸 (pH7.9)、 10顧 ol/L酢酸マグネシウム、 0.5蘭 ol/L DTT、 66蘭 ol/L酢酸カリウム からなる緩衝液 50 Lに溶解し、 10単位の lを加え、 30°Cで 3時間消化反応を行 つた。 フエノール抽出とエタノール沈殿の後、 該 DNA断片を 50雇 ol/L トリス一塩 酸 (pH7.5)、 10應 ol/L塩化マグネシウム、 1舰 ol/L DTTヽ 100雇 ol/L塩化ナトリウ ム、 0,01% ゥシ血清アルブミン、 0.01%Tr on X- 100からなる緩衝液 50〃Lに溶解 し、 10単位の lを加えて 37°Cで 3時間消化反応を行った。 該反応液をァガロー ス電気泳動し、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用いて I — M I断片 (5. Okb)を精製した。 On the other hand, 2 μg of plasmid pGEX-5X-1 (Pharmacia) was added to 33 μl / L Tris-HCl (pH 7.9), dissolved in 50 L of a buffer consisting of 10 ol / L magnesium acetate, 0.5 L ol / L DTT, and 66 L ol / L potassium acetate, added 10 units of l, and added at 30 ° C. A time digestion reaction was performed. After phenol extraction and ethanol precipitation, the DNA fragment was used in 50 ol / L tris monohydrochloride (pH 7.5), 10 ol / L magnesium chloride, 1 ol / L DTT ヽ 100 ol / L sodium chloride Was dissolved in 50 μL of a buffer solution containing 0.01% Pseudoserum albumin and 0.01% Tron X-100, and 10 units of l was added to carry out a digestion reaction at 37 ° C. for 3 hours. The reaction solution was subjected to agarose electrophoresis, and an I-MI fragment (5. Okb) was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN).
上記で回収した pPDE- 1393由来の^ I— I断片(1.0kb)50ng、 pT- 1由来の EcoRV-Gla I断片(0.3kb)50ngおよび pGEX- 5X- 1由来の I -Not I断片 50 ng of ^ I-I fragment (1.0 kb) derived from pPDE-1393, 50 ng of EcoRV-Gla I fragment (0.3 kb) derived from pT-1 and I-Not I fragment derived from pGEX-5X-1
(5.0kb)50ngを DNA Ligation Kit Ver.2(宝酒造社製) を用いてマニュアルに従つ て結合反応を行った。該反応により得られた組み換えプラスミ ド DNAを用いて大腸 菌 J M109株を形質転換し、 常法によりプラスミ ド pGST- PDEを含む大腸菌 J M 109/pGST- PDE株を得た。 該プラスミドの構築過程および制限酵素地図を図 5に示 す。 A 50 ng (5.0 kb) binding reaction was carried out using DNA Ligation Kit Ver.2 (Takara Shuzo) according to the manual. The recombinant plasmid DNA obtained by the reaction was used to transform E. coli JM109 strain, and Escherichia coli JM109 / pGST-PDE strain containing plasmid pGST-PDE was obtained by a conventional method. Figure 5 shows the construction process and restriction map of the plasmid.
B . GST融合蛋白質の大腸菌を用いた発現と PDE活性の測定 Expression of B. GST fusion protein in Escherichia coli and measurement of PDE activity
200 ig/mLのアンビシリンを含む LB培地 50mLに該大腸菌前培養液 (30°C;、 200 / g/fflLのアンピシリンを含む LB培地で一晚培養)を 1/100量加え、 25°Cで振とう培養 した。 0D 値が 0.5になったところで、 イソプロピル-/?- D-チォガラクトビラノシ ド(2翻 ol/L)を添加し、 25°Cで 3時間の条件で発現を誘導した。遠心分離 (3, 000rpm で 10分間)により菌体を回収し、 抽出液 (20蘭 ol/Lトリス—酢酸 (pH7.5)、 2腿 ol/L 塩化マグネシウム、 1雇 ol/L DTT、 250unit/mLァプロチニン、 40〃g/mLフヅ化フ ェニルメチルスルホニル、 l〃g/mL ぺプス夕チン A)に懸濁して、 超音波破砕機 (T0MY model UR- 200R)を用いて大腸菌を破壊した。 上記抽出液を 10,000rpmで 30 分間遠心分離し、 上清を PDE活性測定に用いた。 To 50 mL of LB medium containing 200 ig / mL of ampicillin, add 1/100 of the E. coli preculture solution (30 ° C; culture once in LB medium containing 200 / g / fflL of ampicillin), and add at 25 ° C. The cells were cultured with shaking. When the 0D value reached 0.5, isopropyl-/?-D-thiogalactobilanoside (2 ol / L) was added, and the expression was induced at 25 ° C for 3 hours. The cells were recovered by centrifugation (3,000 rpm for 10 minutes), and the extract (20 orchids ol / L Tris-acetic acid (pH7.5), 2 ol / L magnesium chloride, 1 ol / L DTT, 250 units) / mL aprotinin, 40 μg / mL phenylmethylsulfonyl fluoride, and l / g / mL peptide A), and disrupt Escherichia coli using an ultrasonic crusher (T0MY model UR-200R). did. The extract was centrifuged at 10,000 rpm for 30 minutes, and the supernatant was used for PDE activity measurement.
C . PDE活性の測定 C. Measurement of PDE activity
PDE活性は Kincaid,R.L.と Manganiello,V.C.の方法 Ofethod.Enzymol. , 159, 457-470(1988)) に従って測定した。 [¾]- cAMPまたは [¾]- cGMPを基質として 300 Lの反応液 〔50雇 ol/Lの Ν,·Ν-ビス(2-ヒドロキシェチル )-2_アミノエタンスルホ ン酸 (ρΗ7.2)、 1腿 ol/L塩化マグネシウム、 0.1蓮 ol/Lエチレングリコ一ルビス( ? - アミノエチルエーテル)- NJ,N, J, -四酢酸ニナトリウム〕 中で行った。 基質濃 度は、 ; mol/Lとした。反応液を 30°Cで 15分ィンキュベートした後、 HC1を添加し て反応を停止した。 反応生成物を 5' -ヌクレオチダ一ゼ(シグマ社製)によってァ デノシンに変換し、 DEAE- Sephadex A- 25カラム(フアルマシア社製)で未反応物と 分離した。溶出液をシンチレ一シヨンバイアルに移し、ウルチマゴールド(Packard 社製)を 6mL加え、 液体シンチレ一シヨンカウンター (Beckman LS6500)を用いて放 射活性を測定した。 非触媒的水解量は大腸菌可溶性画分を添加しない時の PDE activity was determined by the method of Kincaid, RL and Manganiello, VC Ofethod. Enzymol., 159, 457-470 (1988)). [¾] -cAMP or [¾] -cGMP as a substrate, 300 L reaction solution [50 ol / L of Ν, · Ν-bis (2-hydroxyethyl) -2_aminoethanesulfonate (ρΗ7. 2), 1 mol / L magnesium chloride, 0.1 lotol / L ethylene glycol bis (?-Aminoethyl ether) -NJ, N, J, -disodium tetraacetate]. The substrate concentration was; mol / L. After incubating the reaction solution at 30 ° C. for 15 minutes, HC1 was added to stop the reaction. The reaction product was converted to adenosine with 5'-nucleotidase (Sigma) and separated from unreacted substances on a DEAE-Sephadex A-25 column (Pharmacia). The eluate was transferred to a scintillation vial, 6 mL of Ultima Gold (manufactured by Packard) was added, and the radioactivity was measured using a liquid scintillation counter (Beckman LS6500). Non-catalytic water dissociation was observed when no E. coli soluble fraction was added.
[¾]- cAMPおよび [¾]-cGMP分解量とした。 大腸菌可溶性画分による分解量は全分 解量から非触媒的水解量を差し引くことにより求めた。蛋白量は、 Bio Rad Protein Assay法を用いて定量した。 コントロールとしてプラスミ ド pGEX-5X- 1のみを導入 した'大腸菌可溶性画分を用いた。 結果を図 6に示す。 - 以上、 本発明のポリぺプチドが c AMP及び c GMPを加水分解する P D E活 性を有することが明白となった。 [¾] -cAMP and [¾] -cGMP degradation amount. The amount of degradation by the Escherichia coli soluble fraction was determined by subtracting the amount of non-catalytic hydrolysis from the total amount of degradation. The protein amount was quantified using the Bio Rad Protein Assay method. As a control, an E. coli soluble fraction into which only plasmid pGEX-5X-1 was introduced was used. Fig. 6 shows the results. -As described above, it has been clarified that the polypeptide of the present invention has PDE activity for hydrolyzing cAMP and cGMP.
実施例 4 : P D E活性を有する蛋白質をコードする全長ヒト c D NA断片のクロ —ン化 Example 4: Cloning of a full-length human cDNA fragment encoding a protein having PDE activity
( 1 ) ヒト胎児腎由来 c D NAライブラリ一からのクローン化 (1) Cloning from human fetal kidney-derived cDNA library
プラスミ ド pGST-PDE 30〃gを、 20腿 ol/L トリス—塩酸 (pH8.5) 、 10醒 ol/L塩 化マグネシウム、 100麵 ol/L塩化カリウム、 1藤 ol/L DTTを含む緩衝液 50 /Lに溶 解し、 40単位の Iおよび gE l (宝酒造社製) を加え、 37°Cで 4時間消化反応を 行った。 Buffer containing 30 μg of plasmid pGST-PDE, 20 t ol / L Tris-HCl (pH 8.5), 10 w / ol / L magnesium chloride, 100 μl / L potassium chloride, 1 w / ol / L DTT The solution was dissolved in 50 / L, 40 units of I and gEl (Takara Shuzo) were added, and the digestion reaction was performed at 37 ° C for 4 hours.
該反応液をァガロース電気泳動にかけ、 約 lkbの DNA断片を回収した。 The reaction solution was subjected to agarose electrophoresis, and a DNA fragment of about 1 kb was recovered.
該 DNA断片を、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用い、 マニュアル に従って精製した。 精製された該 DNA断片を、 ECLダイレクト核酸ラベリング .検 出システム(Amersham社製)を用いて、 ホースラディヅシュパーォキシダーゼ標識 し、 プローブとして用いた。 The DNA fragment was purified using QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual. The purified DNA fragment is labeled with horseradish peroxidase using an ECL direct nucleic acid labeling / detection system (Amersham). And used as a probe.
該プローブを用いてヒト胎児腎由来 cDNAラィブラリー(クロンテヅク社製、商品 名: Human Fetal Kidney 5' -STRETCH PLUS cDNA Library)2 x 1 05クローンを用 いて、 プラークハイプリダイゼーシヨンを行い、 プローブにハイブリダィズする 2 個の独立したファージクローン (ベクター: 人 g t 1 0 ) を得た (クロ一ン 6 - 1、Plaque hybridization was performed using 2 × 10 5 clones of a cDNA library derived from human fetal kidney (manufactured by Clontech, trade name: Human Fetal Kidney 5′-STRETCH PLUS cDNA Library) using the probe. Two independent phage clones (vector: human gt10) hybridizing were obtained (clones 6-1 and 6-1).
23-1)。該ハイプリダイ.ゼ一シヨンの操作は、 全て ECLダイレクト核酸ラベリング23-1). The operation of the hybrid is all performed by ECL direct nucleic acid labeling.
-検出システム(Amersham社製)のマニュアルに従って行った。 該ファ一ジクロ一 ンのうちクロ一ン 23- 1に含まれる cDNA断片を、 ファージベクターからプラスミ ド ベクターへ組み換え直した。 該ファ一ジクロ一ン 23-1の DNA 20〃gを、 50醒 ol/L トリス一塩酸 (pH7.5) 、 10蘭 ol/L塩化マグネシウム、 100腿 ol/L塩化ナトリウム、 1雇 ol/L DTTを含む緩 衝液 30 zL中に溶解し、 15単位の!^ R I (宝酒造社製) を添加し、 37°Cで 4時間消 化反応を行った。該反応液をァガロース電気泳動し、約 2kbおよび lkbの DNA断片を 回収した。 -Performed according to the manual of the detection system (Amersham). The cDNA fragment contained in clone 23-1 of the phage clone was recombined from the phage vector to the plasmid vector. 20 〃g of the DNA of the phageclone 23-1 was added to 50 ol / L tris-hydrochloride (pH 7.5), 10 orchids ol / L magnesium chloride, 100 thigh ol / L sodium chloride, 1 liter ol / L After dissolving in 30 zL of buffer solution containing LDTT, 15 units of! ^ RI (manufactured by Takara Shuzo Co., Ltd.) was added, and the digestion reaction was performed at 37 ° C for 4 hours. The reaction solution was subjected to agarose electrophoresis, and DNA fragments of about 2 kb and 1 kb were recovered.
該 DNA断片を、 QIAEX II Gel Extraction Kit(QIAGEN社製)を用い、 マニュアル 'に従って精製した。 The DNA fragment was purified using a QIAEX II Gel Extraction Kit (manufactured by QIAGEN) according to the manual.
pBluescriptll KS (-) (STRATAGE 社製) 5〃gを 50腿 ol/L トリス—塩酸 (pH7.5 ) 、 10醒 ol/L塩化マグネシウム、 100顧 ol/L 塩化ナトリウム、 1蘭 ol/L DTTを含 'む緩衝液 30 Lに溶解し、 15単位の!^ RI (宝酒造社製) を添加し、 37°Cで 2時間消 化反応を行った。 該反応液よりエタノール沈殿により^ 消化 DNA断片を回収し た。 ' 5 g of pBluescriptll KS (-) (manufactured by STRATAGE) 50 t ol / L Tris-HCl (pH7.5), 10 ol / L magnesium chloride, 100 ol / L sodium chloride, 1 ol / L DTT Was dissolved in 30 L of a buffer solution containing, and 15 units of! ^ RI (manufactured by Takara Shuzo Co., Ltd.) was added, followed by a 2 hour digestion reaction at 37 ° C. ^ -Digested DNA fragments were recovered from the reaction solution by ethanol precipitation. '
該 DNA断片を 50腿 ol/Lトリス一塩酸(ρΗ9· 0).、 1腿 ol/L塩化マグネシウムを含む 緩衝液 30 zLに溶解し、 0.5単位の BAP (E. coli C75) (宝酒造社製) を添加し、 60°Cで 30分間脱リン酸化反応を行った。 該反応液をァガロース電気泳動し、 約 3.0kbの DNA断片を回収した。 該 MA断片を、 QIAEX II Gel Extraction Kit(QIAGEN 社製)を用い、 マニュアルに従って精製した。 The DNA fragment was dissolved in 30 zL of a buffer containing 50 t / ol / L Tris-monohydrochloride (ρΗ90) and 1 t / ol / L magnesium chloride, and 0.5 unit of BAP (E. coli C75) (Takara Shuzo) ) Was added and a dephosphorylation reaction was performed at 60 ° C. for 30 minutes. The reaction solution was subjected to agarose electrophoresis, and a DNA fragment of about 3.0 kb was recovered. The MA fragment was purified using a QIAEX II Gel Extraction Kit (QIAGEN) according to the manual.
上述のクローン 23-1より得られた約 2.0kb、 約 l. Okbの^ M DNA断片 150ngおよ . び pBluescriptll KS (-)の!^ RI— BAP処理済み断片 50ngを 66蘭 ol/L トリス一塩酸 (pH7.5) 、 6.6匪 ol/L塩化マグネシウム、 10mmol/L DTT、 O. lmmol/Lアデノシン 3リン酸を含む緩衝液 20〃Lに溶解し、 T4 DNAリガ一ゼ (宝酒造社製) 175単位を添 加し、 16°Cで 16時間結合反応を行った。 Approximately 2.0 kb of the ^ M DNA fragment of about l. And pBluescriptll KS (-)! ^ RI—BAP-treated fragment 50 ng / 66 ol / L Tris monohydrochloride (pH 7.5), 6.6 ol / L magnesium chloride, 10 mmol / L DTT, O.lmmol / L adenosine triphosphate buffer 20 Then, 175 units of T4 DNA ligase (Takara Shuzo) was added, and the binding reaction was performed at 16 ° C for 16 hours.
該結合反応により得られた組み換えプラスミ ド DNAを用いて大腸菌 JM109株を形 質転換し、 常法によりプラスミ ド p23- Ikおよび p23-2kを取得した。 Escherichia coli JM109 strain was transformed using the recombinant plasmid DNA obtained by the binding reaction, and plasmids p23-Ik and p23-2k were obtained by a conventional method.
該プラスミドに含まれる cDNA断片の塩基配列を決定した結果、 プラスミド p23- lkおよび p23-2kの挿入 DNA断片は^ M部位で連結可能であり、 配列番号 1 6 に記載された約 3.0kbの cDNAが含まれ、 該 cDMには配列番号 1 5に記載された 576 アミノ酸よりなる新規のポリぺプチドがコードされていた。 p23- lkおよび p23- 2k の構造を図 7に示す。 As a result of determining the base sequence of the cDNA fragment contained in the plasmid, the inserted DNA fragments of plasmids p23-lk and p23-2k can be ligated at the ^ M site, and the approximately 3.0 kb cDNA described in SEQ ID NO: 16 And a novel polypeptide consisting of 576 amino acids described in SEQ ID NO: 15 was encoded in the cDM. The structures of p23-lk and p23-2k are shown in FIG.
該ポリぺプチドが有するァミノ酸配列を、 既知の PDE配列と比較したところ、 PDE5Aとの高い相同性が認められた。 該ァミノ酸配列とヒト PDE5Aァミノ酸配列 (GenBank: CM06170)とのァライメントを図 8に示す。 When the amino acid sequence of the polypeptide was compared with a known PDE sequence, high homology with PDE5A was observed. FIG. 8 shows an alignment between the amino acid sequence and the human PDE5A amino acid sequence (GenBank: CM06170).
以上の結果から、 該配列は新規 PDEをコードしていると考えられる。 From the above results, it is considered that the sequence encodes a novel PDE.
( 2 )RT-PCR法を用いた発現解析 (2) Expression analysis using RT-PCR
上記した実施例 4の(1 )で決定した塩基配列の情報を基に配列番号 1 7に示さ れる 5,端側 DNAプラィマーと配列番号 1 8に示される 3,端側 DNAブラィマーを設 計し、 合成した。 Based on the information on the nucleotide sequence determined in (1) of Example 4 described above, a 5, DNA primer shown in SEQ ID NO: 17 and a 3, DNA primer shown in SEQ ID NO: 18 were designed. , Synthesized.
2種類のプライマ一(配列番号 1 7および配列番号 1 8 )各々1.0〃 1/ ヒト組 織] nRNAから作成した cDNAライブラリー 2〃L、各成分 200〃mol/Lの dNTP(dATP、 dGTP 、 dCTP、 dTTP)混合液、 Taq Goldポリメラーゼ(パ一キンエルマ一社製) 2.5単位お よび l xTaq Gold緩衝液(Mg plus) を含む反応溶液 20 Lを用い、 下記条件下で PCR を丁なつた。 Two types of primers (SEQ ID NO: 17 and SEQ ID NO: 18 each 1.0〃1 / human tissue) 2〃L cDNA library made from nRNA, 200〃mol / L dNTP (dATP, dGTP, PCR was carried out under the following conditions using a reaction solution containing a mixture of dCTP and dTTP), 2.5 units of Taq Gold polymerase (manufactured by Pakinkin Elmer) and lxTaq Gold buffer (Mg plus).
即ち、 サ一マルサイクラ一 PTC- 200(MJリサ一チ社製)を用い、 95°Cで 10分間加 熱後、 94°Cで 1分間、 60°Cで 1分間の工程を 1サイクルとして 38サイクル行い、 更 に 72°Cで 8分間加熱した。 得られた該 PCR反応液より lO Lを分取し、 ァガロース電気泳動により予想され る約 400bpの DM断片の増幅を確認した。 精巣、 前立腺、 乳腺、 勝臓での発現が認 められ 。 電気泳動結果を図 9に示す。 産業上の利用の可能性 In other words, after heating at 95 ° C for 10 minutes using a thermal cycler PTC-200 (manufactured by MJ Risaichi Co., Ltd.), a process consisting of 94 ° C for 1 minute and 60 ° C for 1 minute is defined as one cycle. The cycle was performed, and heating was further performed at 72 ° C for 8 minutes. From the obtained PCR reaction solution, lOL was fractionated, and amplification of the expected DM fragment of about 400 bp was confirmed by agarose electrophoresis. Expression in testis, prostate, mammary gland, and rat. The results of the electrophoresis are shown in FIG. Industrial applicability
本発明により得られる新規 P D Eポリぺプチドの D N Aを用いることにより、 $唐尿病、 虚血性心疾患、 高血圧、 腎炎、 臈炎、 潰瘍、 アレルギー、 喘息、 リウマ チ、 骨粗鬆症、 痛み、 不安症、 分裂病、躁鬱病、 パーキンソン病、 痴呆、 感染症、 悪性腫瘍等の疾患の診断、 予防、 治療が可能となる。 By using the DNA of the novel PDE polypeptide obtained according to the present invention, it is possible to use the DNA of $ karauria, ischemic heart disease, hypertension, nephritis, rheumatism, ulcer, allergy, asthma, rheumatism, osteoporosis, pain, anxiety, Diagnosis, prevention, and treatment of diseases such as schizophrenia, manic depression, Parkinson's disease, dementia, infectious diseases, and malignant tumors are possible.
Claims
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2001236101A AU2001236101A1 (en) | 2000-03-07 | 2001-03-06 | Polypeptide having phosphodiesterase activity |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2000-61464 | 2000-03-07 | ||
| JP2000061464 | 2000-03-07 | ||
| JP2000-208610 | 2000-07-10 | ||
| JP2000208610A JP2005229806A (en) | 2000-03-07 | 2000-07-10 | Polypeptide having phosphodiesterase activity |
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| WO2001066716A1 true WO2001066716A1 (en) | 2001-09-13 |
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| Application Number | Title | Priority Date | Filing Date |
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| PCT/JP2001/001720 Ceased WO2001066716A1 (en) | 2000-03-07 | 2001-03-06 | Polypeptide having phosphodiesterase activity |
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| Country | Link |
|---|---|
| JP (1) | JP2005229806A (en) |
| AU (1) | AU2001236101A1 (en) |
| WO (1) | WO2001066716A1 (en) |
Cited By (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2002000854A3 (en) * | 2000-06-26 | 2002-07-11 | Bayer Ag | Regulation of human phosphodiesterase-like enzyme |
| WO2004042386A3 (en) * | 2002-11-08 | 2004-07-15 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a3 (pde11a3) |
| WO2004042387A3 (en) * | 2002-11-08 | 2004-07-15 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a1 (pde11a1) |
| WO2004029617A3 (en) * | 2002-09-24 | 2004-07-22 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a (pde11a) |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2000040733A1 (en) * | 1999-01-07 | 2000-07-13 | Incyte Pharmaceuticals, Inc. | Human cyclic nucleotide pdes |
-
2000
- 2000-07-10 JP JP2000208610A patent/JP2005229806A/en not_active Withdrawn
-
2001
- 2001-03-06 WO PCT/JP2001/001720 patent/WO2001066716A1/en not_active Ceased
- 2001-03-06 AU AU2001236101A patent/AU2001236101A1/en not_active Abandoned
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2000040733A1 (en) * | 1999-01-07 | 2000-07-13 | Incyte Pharmaceuticals, Inc. | Human cyclic nucleotide pdes |
Non-Patent Citations (5)
| Title |
|---|
| CHING-SHWUN LIN ET AL.: "Identification of three alternative first exons and an intronic promoter of human PDE5A gene", BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, vol. 268, no. 2, February 2000 (2000-02-01), pages 596 - 602, XP002941709 * |
| DAVID R. REPASKE ET AL.: "A polymerase chain reaction strategy to identify and clone cyclic nucleotide phosphodiesterase cDNAs", THE JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 267, no. 26, 1992, pages 18683 - 18688, XP002941713 * |
| KEIZO YUASA ET AL.: "Isolation and characterization of two novel phosphodiesterase PDE11A variants showing unique structure and tissue-specific expression", THE JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 275, no. 40, October 2000 (2000-10-01), pages 31469 - 31479, XP002941710 * |
| LINDSAY FAWCETT ET AL.: "Molecular cloning and characterization of a distinct human phosphodiesterase gene family: PDE11A", PROC. NATL. ACAD. SCI. USA, vol. 97, no. 7, March 2000 (2000-03-01), pages 3702 - 3707, XP002941711 * |
| PETER STACEY ET AL.: "Molecular cloning and expression of human cGMP-binding cGMP-specific phosphodiesterase(PDE5)", BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, vol. 247, no. 2, 1998, pages 249 - 254, XP002941712 * |
Cited By (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2002000854A3 (en) * | 2000-06-26 | 2002-07-11 | Bayer Ag | Regulation of human phosphodiesterase-like enzyme |
| WO2004029617A3 (en) * | 2002-09-24 | 2004-07-22 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a (pde11a) |
| WO2004042386A3 (en) * | 2002-11-08 | 2004-07-15 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a3 (pde11a3) |
| WO2004042387A3 (en) * | 2002-11-08 | 2004-07-15 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with human phosphodiesterase 11a1 (pde11a1) |
Also Published As
| Publication number | Publication date |
|---|---|
| AU2001236101A1 (en) | 2001-09-17 |
| JP2005229806A (en) | 2005-09-02 |
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