US9000267B2 - Stress tolerant transgenic plants over-expressing ascorbic acid and cell wall synthesis genes - Google Patents
Stress tolerant transgenic plants over-expressing ascorbic acid and cell wall synthesis genes Download PDFInfo
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Definitions
- the invention generally relates to methods for increasing plant growth, biomass, and stress tolerance.
- the invention provides methods for increasing plant growth, biomass and stress tolerance by genetically engineering plants to contain and express a gene of the ascorbic acid synthesis-cell wall synthesis network.
- a potential solution to these problems could be an overall increase in plant growth and biomass, particularly for plants that are used for food and/or fuel production.
- An increase in aboveground biomass could represent an important addition to renewable energy and food production, while a concomitant enhancement of belowground biomass could significantly contribute to carbon sequestration to lower tropospheric greenhouse gases.
- the method is based on the surprising discovery that genetically engineering a plant to contain and express at least one gene from the ascorbic acid (AsA) and cell wall polysaccharide synthesis network causes the plant to exhibit an increase in growth rate, biomass, and tolerance to stress. Increases in growth rate are advantageous in that this opens the possibility for harvesting mature crops even in areas with short growing seasons. Alternatively, in areas with longer growing seasons, multiple crops may be planted and harvested consecutively from the same plot.
- the present invention provides a method for increasing the growth rate, biomass or stress tolerance of a plant.
- the method comprises the step of genetically engineering the plant to contain and overexpress at least one functional gene product of an ascorbic acid synthesis-cell wall synthesis network.
- the functional gene products include myo-inositol oxygenase, glucuronic acid reductase, L-gulono-1,4-oxidase, glucuronate kinase, L-gulonate lactonase, gulono-1,4-lactone dehydrogenase, GDP-mannose pyrophosphorylase, GDP-mannose-3,5-epimerase, GDP-L-galactose phosphodiesterase, L-galactose 1-phosphate phosphatase, L-galactose-1-dehydrogenase, L-galactono-1,4-lactone dehydrogenase, methylgalacturonate methyl-esterase, D-galactu
- either wet biomass or dry biomass, or both, of the plant is increased.
- the salt tolerance of the plant is increased.
- Exemplary plants include Arabidopsis , lettuce, tobacco, soybeans, potato, tomato, canola, rice, corn, wheat and hybrid poplar.
- the step of genetically engineering the plant causes an increase in the level of vitamin C of the plant. In other cases, the step of genetically engineering the plant does not cause an increase in the level of vitamin C of the plant.
- the invention also provides a transgenic plant that is genetically engineered to contain and over-express at least one functional gene product of an ascorbic acid synthesis-cell wall synthesis network.
- functional gene products include myo-inositol oxygenase, glucuronic acid reductase, L-gulono-1,4-oxidase, glucuronate kinase, L-gulonate lactonase, gulono-1,4-lactone dehydrogenase, GDP-mannose pyrophosphorylase, GDP-mannose-3,5-epimerase, GDP-L-galactose phosphodiesterase, L-galactose 1-phosphate phosphatase, L-galactose-1-dehydrogenase, L-galactono-1,4-lactone dehydrogenase, methylgalacturonate methyl-esterase, D-galacturonate reductase, L-galactonate lactonas
- the transgenic plant exhibits increased biomass. In some embodiments, either wet biomass or dry biomass, or both, is increased. In some embodiments, the plant exhibits increased stress tolerance and or increased salt tolerance.
- the transgenic plant may be, for example, Arabidopsis , lettuce, tobacco, soybeans, potato, tomato, canola, rice, corn, wheat and hybrid poplar. In some embodiments, the transgenic plant exhibits an increase in a level of vitamin C. In other embodiments, the transgenic plant does not exhibit an increase in a level of vitamin C.
- the invention also provides an isolated and substantially purified plant glucuronic acid (GlcUA) reductase enzyme.
- the plant glucoronic acid reductase enzyme may be translated from a cloned plant glucoronic acid reductase gene.
- the amino acid sequence of the plant GlcUA reductase enzyme is represented by SEQ ID NO: 8.
- the cloned plant GlcUA reductase gene has a nucleotide sequence represented by SEQ ID NO: 7.
- the invention also provides an isolated and substantially purified nucleotide sequence encoding a plant GlcUA reductase enzyme.
- the isolated and substantially purified nucleotide sequence is represented by SEQ ID NO: 7.
- the invention further provides a vector comprising the nucleotide sequence represented by SEQ ID NO: 7.
- the at least one functional gene product of an AsA synthesis-cell wall synthesis network is a plant GlcUA reductase enzyme.
- the plant GlcUA reductase enzyme is translated from a cloned plant GlcUA reductase gene, which may have a nucleotide sequence represented by SEQ ID NO: 7. Further, the amino acid sequence of the plant GlcUA reductase enzyme may be represented by SEQ ID NO: 8.
- the invention also provides a method of increasing sequestration of carbon from the atmosphere by a plant.
- the method comprises the step of genetically engineering the plant to contain and over-express at least one functional gene product of an ascorbic acid synthesis-cell wall synthesis network, such that over-expression of the at least one functional gene product results in an increase in underground biomass of the plant and a consequent increase in carbon sequestered by the plant.
- FIG. 1 Ascorbate (*) and cell wall polysaccharide biogenesis ( ⁇ ) network.
- FIG. 2 Phenotype of foliar and root organs of MIOX4 and GLOase over-expressing lines compared to wild type (wt) and vitamin C-deficient vtc1-1 Arabidopsis thaliana plants. Plants were grown in a controlled environment chamber at 251° C., 150 ⁇ mol m ⁇ 2 s ⁇ 1 , 60% humidity and 16/8 photoperiod.
- FIG. 6 Effect of salt on wt and MIOX4 plants. Plants were grown in the greenhouse under ambient conditions and watered with either no salt (0 NaCl) or 150 mM NaCl. Higher salt tolerance was demonstrated by survival of the MIOX4 plants compared to wt.
- FIGS. 7A and B show: A, the nucleotide sequence (SEQ ID NO: 7), and B, the amino acid sequence (SEQ ID NO: 8) of plant GlcUA reductase amplified from Arabidopsis leaf.
- FIG. 8 Protein alignment of the plant GlcUA reductase from Arabidopsis as amplified versus the At2g37770 sequence (GeneBank Accession No. ACC23647). Top line, SEQ ID NO: 8; middle line, SEQ ID NO: 10; bottom line, SEQ ID NO: 9,
- FIG. 9 Vitamin C level of vtc-1-1 mutant, transformed with plant GlcUA reductase from Arabidopsis (T2 generation).
- Y axis is vitamin C level in ⁇ mol/gram of fresh weight;
- X axis represents plants, each one representing a different transformation event.
- Arabidopsis plants were transformed with Agrobacterium tumefaciens ; the T-DNA inserts into the plant genome randomly.
- the invention provides methods of increasing the growth rate, the aboveground and belowground biomass, and the stress tolerance of plants. This is accomplished by manipulating the expression of enzymes of the ascorbic acid-cell wall metabolic network in order to direct the flow of intermediates in the network.
- the invention provides an important addition to renewable energy and food production strategies, the methods being directly applicable to crop species and trees of economical and environmental importance.
- the concomitant enhancement of belowground biomass significantly contributes to carbon sequestration to lower tropospheric greenhouse gases.
- the invention involves genetically engineering a plant to contain and over-express at least one gene of the ascorbic acid synthesis-cell wall synthesis network, and further provides transgenic plants that are genetically engineered in this manner.
- the strong interconnection of the AsA biosynthetic pathway and the non-cellulosic cell wall biogenesis pathway (see FIG. 1 ) together with the experimental results obtained (see Examples section) suggest that transgenic plants that are genetically engineered to over-express at least one gene of the ascorbic acid synthesis-cell wall synthesis network have a more robust growth of the aboveground and belowground biomass of the plant, as well as increased tolerance to stress, as intermediates of the ascorbic acid route are diverted to pathways that promote biomass growth and tolerance to stress.
- increase in growth rate we mean that the plant increases its wet and/or dry biomass at a rate that is more rapid than that of a comparable, control plant that has not been genetically engineered in the manner herein described.
- the genetically engineered plant takes less time than the control plant to accumulate a particular biomass.
- the genetically engineered plant may ultimately exhibit a biomass that is greater than could be achieved by a corresponding control plant, no matter how long the control plant was allowed to grow. Further, the time to maturation of the genetically engineered plant may also be accelerated, i.e.
- the hallmarks of maturation may appear sooner in the genetically engineered plant than in a control plant, i.e. the rate of maturation may also be accelerated.
- the level of increase in growth rate of the plant will be in the range of from at least about 10 to at least about 100%, and preferably from at least about 25 to at least about 75%, and most preferably, the increase will be at least about 50% above the level of expression in a control plant.
- “increased tolerance of stress” or “increased stress tolerance” we mean that the plant exhibits the ability to grow in a manner that is more successful than comparable control plants that are not genetically engineered as described herein, even under circumstances or conditions of stress for the plant.
- the genetically engineered plant is able to develop more or less normally with respect to growth rate, biomass, color, maturation, fruit production, etc, even under conditions of stress.
- Factors contributing to conditions of stress for plants include but are not limited to: increases in soil or water salinity, lack of nutrients, air pollution, extreme cold or hot temperatures, photo-oxidation, and osmotic stress (e.g. drought, excessive wetness), etc.
- plants that are genetically engineered according to the methods of the present invention maintain a growth rate and/or accumulate biomass and/or achieve a final biomass that is at least about 10 to about 100% greater than control plants, and preferably at least about 25 to at least about 75% greater, and most preferably, at least about 50% greater than control plants grown under the same conditions.
- transgenic plant that is genetically engineered to over-express at least one gene of the AsA synthesis-cell wall synthesis network we mean that the transgenic plant has been genetically engineered or modified to contain and express at least one gene of the ascorbic acid synthesis-cell wall synthesis network at a level that is higher than the level of expression of the corresponding gene in matched, control plants that have not been genetically engineered in this manner. This may be accomplished in any of several ways that are known to those of skill in the art, e.g. by introducing one or more genes of the network that are not typically found in the plant (e.g. heterologous genes); by introducing multiple copies of genes of the network that are already in the plant (e.g.
- homologous genes by adding genes or DNA sequences that are not in the network but which cause increased expression of genes in the pathway (e.g. promoter sequences, transcription factors, regulatory proteins, etc.).
- genes in the pathway e.g. promoter sequences, transcription factors, regulatory proteins, etc.
- the level of increase in expression of the gene will be in the range of from at least about 10 to at least about 100%, and preferably from at least about 25 to at least about 75%, and most preferably, the increase will be at least about 50% above the level of expression in a suitable control plant.
- transgenic plants that have been genetically engineered or modified we mean that the plants have been genetically engineered to contain DNA that is not found in the plant prior to the genetic modification; or that is not found in the plant in the same form or in the same amount as prior to the genetic modification; or that is not expressed at as high a level prior to the genetic modification.
- a gene encoding an enzyme from another source e.g. a heterologous gene from another organism, or from another plant species or variety
- a gene from the ascorbic acid synthesis-cell wall synthesis network may be isolated and purified from Arabidopsis thaliana , cloned and manipulated using molecular biology techniques, inserted into a suitable vector, and then used to transform plant cells from another plant (e.g. tobacco, lettuce, etc.).
- the genetic modification may involve cloning of a gene from a plant species, genetic manipulation of the gene, and reinsertion and expression of the gene into the same species of plant.
- the transgenic plant may, prior to genetic manipulation, contain a gene encoding the same or a similar enzyme with which is it genetically transformed.
- the gene may be present in the transgenic plant in the same form and at a similar level, but with a genetic alteration (e.g. with a super promoter cloned into the gene) that increases the level of expression of the gene in the plant.
- a genetic alteration e.g. with a super promoter cloned into the gene
- multiple copies of the gene may be introduced.
- a combination of the above approaches may be used.
- the genetic modification contemplated by this invention confers the advantage of the gene product being over expressed in a manner that increases the growth rate and/or biomass and/or stress tolerance of the transgenic plant.
- the gene or genes which are used to carry out genetic modification according to the present invention are those which encode enzymes of the AsA synthesis-cell wall synthesis network. This network is depicted in FIG. 1 .
- Examples of enzymes that may be used in the practice of the present invention include but are not limited to glucuronic acid reductase (GlcUA reductase, At2g37770), gulono-1,4-lactone oxidase (GLOase, D12754), and myo-inositol oxygenase (MIOX, AY232552).
- the enzymes are GlcUA reductase, GLOase, and MIOX.
- genes that are used to transform plants according to the methods of the present invention. Examples include but are not limited to plants, mammals, yeast, fungi and bacteria. Preferably, the source of the genes will be plants.
- the present invention also provides plant GlcUA reductase enzymes and the genes that encode such enzymes.
- Exemplary nucleotide and amino acid sequences of such a plant GlcUA reductase enzyme from Arabidopsis are provided in FIGS. 7A and B, respectively.
- the invention provides such nucleotide in an isolated and substantially purified form, i.e. so far as is possible under standard laboratory procedures, the gene is cloned and isolated from a suitable source, and free of extraneous material, such as other genes, proteins, etc.
- the gene will be at least about 50% purified, and preferably at least about 75% purified, and most preferably at least about 95% or more purified (e.g.
- isolated and purified genes may include such entities as buffering molecules, salts, reaction components, etc., that are typically present in suspension media used in laboratory purification schemes, for storage of “purified” genes, and for various genetic manipulations.
- the gene itself may be included in a vector, particularly a vector that is suitable for genetic manipulations, or for translation of the gene product.
- both the DNA and RNA (e.g. MRNA) forms of the gene are included in the invention.
- the invention also provides the gene product translated from the cloned gene, both in a form that is purified, for example, in a laboratory setting (e.g. substantially free from other organic components as described for the gene above) or translated within a transgenic plant into which it has been introduced by genetic engineering techniques.
- the present invention also provides transgenic plants modified by the methods of the present invention.
- the plants to be genetically modified may be any of a wide variety of types, including but not limited to Arabidopsis , tobacco, potato and lettuce.
- the plants that are so modified are Arabidopsis , tobacco, potato and lettuce.
- the gene(s) that is/are inserted into the transgenic plants encode enzyme which include but are not limited to glucuronic acid reductase (GlcUA reductase, At2g37770), gulono-1,4-lactone oxidase (GLOase, D12754), and myo-inositol oxygenase (MIOX, AY232552).
- the enzymes are GlcUA reductase, GLOase, and MIOX.
- a transgenic plant transformed with plant GlcUA reductase for example, with the nucleotide sequence represented in FIG. 7A , SEQ ID NO: 7 and expressing an active GlcUA reductase enzyme (for example, an enzyme with an amino acid sequence as represented in FIG. 7B , SEQ ID NO: 8) is contemplated.
- transgenic “plant” we mean the “plant” as is commonly understood, including, for example; a stalk, vine or trunk; root system; and leaves.
- plant also encompassed in the meaning of “plant” are various other parts of the plant, e.g. any reproductive portions of the plant (such as fruit, cones, pods, flowers, etc.), and including such components as seeds, pollen, ovules, and the like.
- offspring of the transgenic plants are also encompassed in this meaning, regardless of the method of propagation (e.g. by sprouting seeds, by rooting leaves, bulbs, tubers, etc.).
- alterations in the DNA sequence may be made for any of several reasons (for example, to produce a convenient restriction enzyme site or to alter the stability of the MRNA) with or without affecting the amino acid sequence of the polypeptide translation product. Changes may be made which alter the amino acid sequence of the polypeptide (either purposefully to change the polypeptide sequence, or inadvertently due to a desired change in the DNA sequence) which still result in the expression of a suitable, functional enzyme.
- genes in the network are intended to be encompassed by the present invention.
- the genes will display significant homology to the genes first identified in A. thaliana , preferably from about 50 to 100% homology, and more preferably about 75 to 100% homology, and most preferably from about 80, 85, 90 or 95% to 100% homology, so long as a suitable level of enzymatic activity of the enzymic gene product is maintained. Also included are nucleotide sequences that hybridize to the A. thaliana gene under conditions of high stringency, and proteins or polypeptides that are produced therefrom.
- the polypeptide that is encoded by one of the genes of interest may vary in translated primary sequence. However, in general, they will display about 50 to 100% homology to the enzymes isolated from A. thaliana , and preferably about 75 to 100% homology, or even from about 80, 85, 90 or 95% to 100% homology, and will retain a level of activity that is sufficient to promote and sustain increased growth rate, biomass and stress tolerance of the transformed plant. Variations in amino acid sequence may be due to any of a number of factors, including substitutions (both conservative and non-conservative), deletions, insertions, etc. in the nucleic acid sequence that encodes the enzyme, alterations that are introduced by genetic engineering, and post-translational modifications.
- Amino acids may be deleted from the amino or carboxyl terminus of the polypeptide, or new sequences (e.g. targeting sequences) may be added to the polypeptide, or changes may be made to alter the stability of the protein. Alternatively, variations may also reflect inter-species or inter-varietal variations.
- the means of determining homology between nucleic acid sequences or between amino acid sequences are well known to those of skill in the art.
- transgenic plants are well developed and well known to those of skill in the art.
- dicotyledon plants such as soybean, squash, tobacco (Lin et al. 1995), and tomatoes can be transformed by Agrobacterium -mediated transformation.
- Agrobacterium -mediated transformation Miesfeld, 1999, and references therein.
- special laboratory strains of the soil bacterium Agrobacterium are used as a means to transfer DNA material directly from a recombinant bacterial plasmid into the host cell. DNA transferred by this method is stably integrated into the genome of the recipient plant cells, and plant regeneration in the presence of a selective marker (e.g. antibiotic resistance) produces transgenic plants.
- a selective marker e.g. antibiotic resistance
- genes may be inserted by such techniques as microinjection, electroporation or chemical transformation of plant cell protoplasts (Paredes-López, 1999 and references therein), or particle bombardment using biolistic devices (Miesfeld, 1999; Paredes-López, 1999; and references therein).
- Monocotyledon crop plants have now been increasingly transformed with Agrobacterium (Hiei, 1997) as well.
- the gene may be identified, isolated and incorporated into a suitable construct such as a vector.
- a suitable construct such as a vector.
- Techniques for manipulating DNA sequences e.g. restriction digests, ligation reactions, and the like
- DNA sequences are well known and readily available to those of skill in the art. For example, Sambrook et al., 1989.
- Suitable vectors for use in the methods of the present invention are well known to those of skill in the art.
- such vector constructs may include various elements that are necessary or useful for the expression of the gene of interest.
- elements include promoters, enhancer elements, terminators, targeting sequences, and the like.
- a non-native (i.e. not associated with the gene in nature) constitutive or “strong” promoter sequence may be added in order to cause increased levels of expression of the gene.
- an inducible promoter responsive, for example, to environmental conditions such as oxidative stress may be inserted in order to make selective expression of the gene possible.
- Other types of genetic modifications that may be used to genetically modify the genes of interest of the present invention include but are not limited to the addition of developmentally regulated promoters to make possible selective expression at a particular time and/or location within the plant.
- a plant may be genetically modified to contain more than one gene of interest (i.e. several different genes of interest), and a single gene of interest may be present in more than one copy in the plant. Further, multiple copies of one gene of interest may be included in a single construct, or copies of more than one gene of interest may be included on a single construct.
- the gene(s) of interest may be retained in the host plant extrachromosomally, or may be integrated into the host plant genome.
- plants exist to which the technology of the present invention may be applicable. Examples include but are not limited to: crops grown for food production for humans or other animals (e.g. wheat, rice, canola, sunflowers, tomatoes, strawberries, apples, peaches, pears, etc.); crops grown for fuel (e.g. corn, soybeans, etc.); ornamental plants such as bedding plants and roses; trees that are used for fuel, building, etc. such as hybrid poplar, pine cedar; and fiber crops such as cotton hemp, flax, kanaf, etc. Further, plants that are genetically engineered according to the methods of the present invention may also be genetically engineered to exhibit other traits as well, e.g. pest or pesticide resistance, salt tolerance, or resistance to oxidative stress. In sum, any plant capable of being genetically engineered as described herein, in a manner that results in increased growth rate and/or biomass and/or stress tolerance, or any combination of theses traits.
- crops grown for food production for humans or other animals e.g. wheat, rice, canola,
- the invention also provides a method of sequestering carbon by genetically engineering plants, especially trees, to contain and express a functional gene of the AsA biosynthesis-cell wall biosynthetic network.
- L-Ascorbic acid is a major antioxidant molecule, an essential cofactor for several important metal-containing enzymes and is implicated in control of cell division and growth (Smirnoff and Wheeler, 2000; Davey et al., 2000; Arrigoni and de Tullio, 2002).
- AsA plays numerous critical roles in plant growth and development, a biosynthetic pathway for this versatile compound was not elucidated until 1998 (Wheeler et al.). Since that time, several research groups have discovered additional routes for synthesis and a complex network for producing ascorbic acid is now recognized.
- Man/Gal D-mannose/L-galactose
- D-galacturonate Agius et al., 2003
- MI myo-inositol
- UDP-mannose-3,5-epimerase appears to function under stress conditions (Wolucka and van Montagu, 2003).
- the MI route to ascorbate is initiated by the MI oxygenase (MIOX) conversion of MI to D-glucuronic acid (GlcUA), and continued by reduction of GlcUA to L-gulonate to L-gulono-1,4-lactone by gluconolactonase and to ascorbic acid by gulono, 1,4-lactone oxidase (GLOase).
- MIOX MI oxygenase
- GLOase gulono, 1,4-lactone oxidase
- MIOP MI oxidation pathway
- MIOP The presence of MIOP has been demonstrated in a wide variety of plant species and tissues (Loewus and Murthy, 2000). MIOP involves cyclization of D-glucose-6-phosphate to inositol-3-phosphate, loss of phosphate to form MI, oxidation of MI to GlcUA, phosphorylation at carbon 1, and conversion to UDP-D-GlcUA. Alternatively, D-glucose-6-P is converted to UDP-D-glucose, which undergoes oxidation to UDP-D-GlcUA, a process named the sugar nucleotide oxidation pathway (SNOP).
- SNOP sugar nucleotide oxidation pathway
- UDP-GlcUA is the central intermediate in the inter-conversion pathway to other nucleotide sugars, including UDP-derivatives of arabinose, xylose, apiose and galacturonic acid which account for half the biomass of a typical Arabidopsis leaf cell wall (Seitz et al., 2000). Both UDP-D-GlcUA and its product of decarboxylation, UDP-D-xylose, strongly inhibit NAD + dependent UDP-D-glucose dehydrogenase (UGD), the enzyme that oxidizes UDP-glucose to UDP-D-GlcUA.
- UDP-D-GlcUA NAD + dependent UDP-D-glucose dehydrogenase
- FIG. 1 depicts the ascorbate (*) and cell wall polysaccharide biogenesis ( ⁇ ) network.
- FIG. 3 shows fresh weight data from a 6-week experiment with wt and ascorbic acid deficient mutant vtc1-1, as well as these same genotypes transformed with the rat GLOase and MIOX genes expressed from the 35S promoter.
- the fresh weight of the vtc1-1 mutant is reduced relative to wt, which is well documented by us and others.
- both vtc1-1 and wt plants show a 50% increase in growth as a result of expressing either GLOase or MIOX.
- FIG. 4 shows dry weight data from plants of the same genotypes.
- the dry weight of the vtc1-1 mutant is reduced relative to wt.
- both vtc1-1 and wt plants display a 50% increase in dry weight as a result of expressing either GLOase or MIOX.
- Similar results have been obtained in independent experiments carried out under greenhouse conditions with MIOX over-expressing lettuce ( Lactuca sativa var. Black Seeded Simpson) lines, and with GlcUA reductase vtc1-1 over-expressing lines (data not shown).
- FIG. 5 shows AsA data from a 6-week experiment with wt and AsA deficient mutant vtc1-1, both with and without transformation with the rat GLOase and MIOX genes expressed from the 35S promoter.
- both the wt and vtc1-1 mutant have higher levels of AsA when expressing GLOase.
- expression of MIOX while increasing levels of AsA in wt plants, does not cause a recovery of AsA in vtc1-1.
- AsA levels in transgenic plants transformed with both MIOX and GLOase continue to rise over the time course of the experiment, whereas AsA levels declined in wt plants.
- FIGS. 3 , 4 and 5 A comparison of the data of FIGS. 3 , 4 and 5 reveals that the increase in wet and dry weight in plants transformed with either GLOase or MIOX ( FIGS. 3 and 4 ) cannot be due only to higher AsA levels, since MIOX over-expressing plants do not exhibit increased ascorbic acid levels in wt or vtc1-1 backgrounds ( FIG. 5 ).
- Plants must coordinate metabolism and growth between various cells, tissues and organs; and, since they lack motility plants require built-in defenses against both biotic and abiotic stresses.
- plant cell metabolism is highly sequestered into membrane-bound organelles and primary metabolism is characterized by redundancy with there often being multiple routes leading to the same end.
- elevated AsA may provide protection against a variety of stresses including air pollution, extreme cold or hot temperatures, photo-oxidation, and osmotic stress.
- a 25 ⁇ L PCR reaction containing 3 ⁇ L of an Arabidopsis mixed tissue cDNA library (CD4-7) from the Arabidopsis Biological Resource Center (ABRC, Columbus, Ohio) as template was performed with proofreading polymerase (Pfu Turbo DNA polymerase, Stratagene, La Jolla, Calif.). After denaturation at 94° C. for 5 min, amplification was performed by 30 cycles of 1 min at 94° C., 1 min at 50° C. and 2 min at 72° C., followed by 5 min at 72° C. The 957 bp PCR fragment was cloned into the pGEM-T Easy vector (Promega, Madison, Wis.), amplified in E. coli DH5 ⁇ and sequenced in both directions with T7 and SP6 primers using the ABI PRISM BigDye Terminator Cycle Sequencing Kit (PE Applied Biosystems, Foster City, Calif.).
- Nucleotide sequence of cDNA encoding MIOX4 (GenBank AY232552) (SEQ ID NO: 3) 1 atgacgatct ctgttgagaa gccgatttt gaagaggttt ctgcattcga gaagagtggg 61 gacaatatcg gagagttgaa attggacgga ggattttcga tgccgaaaat ggacaccaat 121 gacgacgaag ctttttggc tcctgagatg aatgcatttg gccgccaatt cagggactac 181 gatgttgaga gtgagaggca aaagggcgtc gaagagtttt acagattacg acacatcaac 241 caaactgtcg actttgtgaa aaagatgagg gc
- the reverse primer (5′TTAGTAGAAGACTTTCTCCAGGTACGAATTCAAGAACATTCCA GTG-3′) (SEQ ID NO: 5) was designed to add the missing 26 nucleotides at 3′ end of the truncated EcoRI fragment.
- Nucleotide sequence of partial cDNA encoding GLOase (GenBank J03536) (SEQ ID NO: 6) 1 ggatcctcct gatcactgga atcatggtcc atgggtacaa aggggtccag ttccaaaatt 61 gggcaaagac ctatggttgc agtccagagg tgtactacca gcccacctcc gtggaggagg 121 tcagagaggt gctggccctg gcccgggagc agaagaagaa agtgaaggtg gtgggtggtg 181 gccactcgcc ttcagacatt gcctgcactg acggtttcat gatccacatg ggcaagatga 241 accgggttct ccaggtggac aaggagaaga ag
- the cloned PCR fragment was subcloned into NcoI and SacI sites of pRTL2 (Restrepo et al., 1990) to create pGLO-2 which places the GLOase insert under the control of CaMV 35S promoter with a dual enhancer, with the 5′ tobacco etch virus leader and a 3′ nopaline synthase terminator.
- the 35S::GLOase construct was subcloned into the Hind III site of the binary vector pBIN19 and electroporated into Agrobacterium tumefaciens LBA4404. Plant Material and Growth Conditions
- Seeds of Arabidopsis thaliana (ecotype Columbia) both wild type and transgenic homozygous lines were grown in Sunshine Mix #1 (Wetzel, Harrisonburg, Va.) in a greenhouse during the months of September to December of 2004.
- the greenhouse is equipped with supplemental light (mercury vapor) and a heat-pump to keep temperature and relative humidity conditions as follows: a 16:8 h protoperiod, photon flux density of 950 ⁇ mol m ⁇ 2 s ⁇ 1 , temperature 26:18 ⁇ 2.5° C. (day:night), and relative humidity of 50:70 ⁇ 10% (day:night).
- the miox4 insert was cloned into the NcoI/BamH1 sites of pRTL2 placing it under the control of CaMV 35S promoter with duplicated enhancer between the 5′ tobacco etch virus (TEV) leader and the 3′ 35S polyadenylation signal (Rastrepo et al., 1990).
- a PstI fragment including the promoter::miox4::terminator insert was sub-cloned into the binary vector pCAMBIA1300 and transformed into Agrobacterium tumefaciens strain GV3101. A. thaliana var. Columbia plants were transformed with pCAMBIA1300:miox4 construct via the floral dip method (Clough and Bent, 1998).
- Seedlings were selected on MS (Murashige and Skoog, 1962) plates containing 500 mg L ⁇ 1 carbenecillin and 25 mg L ⁇ 1 hygromycin. Both primary transformants and their progeny were used for RNA gel blot analysis and ascorbic acid assays.
- VTC1 normal VTC locus
- GMPase GDP-Man pyrophosphorylase
- MS Mannose-1-phosphate guanyl transferase
- Ascorbic acid content was measured by the ascorbate oxidase assay (Rao and Ormrod, 1995). Plant extracts were made from tissue frozen in liquid nitrogen, ground in 6% meta-phosphoric acid, and centrifuged at 15,000 g for 15 min. Reduced AsA was determined by measuring the decrease in absorbance at 265 nm (extinction coefficient of 14.3 mM) after addition of 1 U of ascorbate oxidase (Sigma) to 1 mL of the reaction medium containing the plant extract and 100 mM potassium phosphate, pH 6.9. Oxidized AsA was measured in a 1 mL reaction mixture plus 1 ⁇ L of 2 mM DTT after incubating at room temperature for 15 mm.
- MI myo-inositol
- MIOX is an enzyme containing non-heme iron that catalyses a four-electron oxidation with the transfer of only one atom of oxygen into the product D-glucuronic acid (GlcUA).
- GlcUA reductase EC 1.1.1.19
- gulonate dehydrogenase L-hexonate dehydrogenase.
- GlcUA reductase belongs to the family of aldo/keto reductases and has been extensively studied in mammalian models (Smirnoff, 2001 and references therein, however, there are no reports of its enzymatic activity in plants.
- FIG. 7A and B show the nucleotide sequence (SEQ ID NO: 7) and the amino acid sequence (SEQ ID NO: 8) of ORF At2g37770, respectively, which represents the first identification of a plant GlcUA reductase.
- Sbject 1 refers to the Gene Bank sequence, SEQ ID NO: 9
- Query 1 refers to the Arabidopsis plant GlcUA reductase sequence, SEQ ID NO: 8
- sequence positioned between Query 1 and Sbjct 1 represents the amino acids common to both sequences (SEQ ID NO: 10).
- GlcUA reductase represents a powerful tool to manipulate vitamin C in plants and develop plants with increased growth rate, biomass accumulation and enhanced stress tolerance.
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Abstract
Description
Nucleotide sequence of cDNA encoding MIOX4 (GenBank AY232552) | |
(SEQ ID NO: 3) | |
1 atgacgatct ctgttgagaa gccgattttt gaagaggttt ctgcattcga gaagagtggg | |
61 gacaatatcg gagagttgaa attggacgga ggattttcga tgccgaaaat ggacaccaat | |
121 gacgacgaag cttttttggc tcctgagatg aatgcatttg gccgccaatt cagggactac | |
181 gatgttgaga gtgagaggca aaagggcgtc gaagagtttt acagattacg acacatcaac | |
241 caaactgtcg actttgtgaa aaagatgagg gctgaatatg gaaaattaga taaaatggtg | |
301 atgagcattt gggaatgttg tgagcttctc aatgaggttg tggatgagag tgatccagat | |
361 cttgacgagc cccagattca gcatttgctt caatctgccg aagccatccg caaagattac | |
421 cctaatgaag attggcttca tctgaccgct cttatccatg atcttgggaa agttattact | |
481 cttccacaat tcggaggact tcctcaatgg gctgttgttg gtgacacatt ccctgttgga | |
541 tgtgcatttg atgaatctaa cgtacatcac aagtactttg tggaaaaccc agattttcac | |
601 aacgaaacct acaacactaa aaatgggatt tactctgaag ggtgtggatt aaacaatgtc | |
661 atgatgtctt ggggccatga cgactacatg tacctggtgg ctaaagaaaa cggaagtacc | |
721 ttgccgtcgg ctggacagtt tatcataaga taccactcct tttacccttt gcacacggct | |
781 ggagaataca cccatcttat gaacgaggaa gacaaggaga atctgaagtg gctacacgtt | |
841 ttcaacaagt acgacttgta cagtaagagc aaagttcacg ttgatgtgga gaaggtcgag | |
901 ccttactaca tgtctcttat caagaaatat ttcccggaaa acttgaggtg gtga |
Assembly of the GLOase Constructs.
Nucleotide sequence of partial cDNA encoding GLOase (GenBank J03536) | |
(SEQ ID NO: 6) | |
1 ggatcctcct gatcactgga atcatggtcc atgggtacaa aggggtccag ttccaaaatt | |
61 gggcaaagac ctatggttgc agtccagagg tgtactacca gcccacctcc gtggaggagg | |
121 tcagagaggt gctggccctg gcccgggagc agaagaagaa agtgaaggtg gtgggtggtg | |
181 gccactcgcc ttcagacatt gcctgcactg acggtttcat gatccacatg ggcaagatga | |
241 accgggttct ccaggtggac aaggagaaga agcagataac agtggaagcc ggtatcctcc | |
301 tggctgacct gcacccacag ctggatgagc atggcctggc catgtccaat ctgggagcag | |
361 tgtctgatgt gacagttgct ggtgtcattg gatccggaac acataacaca gggatcaagc | |
421 acggcatcct ggccactcag gtggtggccc tgaccctgat gacagctgat ggagaagttc | |
481 tggaatgttc tgagtcaaga aatgcagatg tgttccaggc tgcacgggtg cacctgggtt | |
541 gcctgggcat catcctcacc gtcaccctgc agtgtgtgcc tcagtttcag cttcaggaga | |
601 catccttccc ttcgaccctc aaagaggtcc ttgacaacct agacagccac ctgaagaggt | |
661 ctgagtactt ccgcttcctc tggtttcctc acactgagaa cgtcagcatc atctaccaag | |
721 accacaccaa caaggccccc tcctctgcat ctaactggtt ttgggactat gccatcgggt | |
781 tctacctact ggagttcttg ctctggacca gcacctacct gccatgcctc gtgggctgga | |
841 tcaaccgctt cttcttctgg atgctgttca actgcaagaa ggagagcagc aacctcagtc | |
901 acaagatctt cacctacgag tgtcgcttca agcagcatgt acaagactgg gccatcccta | |
961 gggagaagac caaggaggcc ctactggagc taaaggccat gctggaggcc caccccaaag | |
1021 tggtagccca ctaccccgta gaggtgcgct tcacccgagg cgatgacatt ctgctgagcc | |
1081 cctgcttcca gagggacagc tgctacatga acatcattat gtacaggccc tatggaaagg | |
1141 acgtgcctcg gctagactac tggctggcct atgagaccat catgaagaag tttggaggaa | |
1201 gaccccactg ggcaaaggcc cacaattgca cccagaagga ctttgaggaa atgtacccca | |
1261 cctttcacaa gttctgtgac atccgtgaga agctggaccc cactggaatg ttcttgaatt | |
1321 cgtacctgga gaaagtcttc tactaaagca ggagtggaaa caaaccaccc tgacccctca | |
1381 cacttctgct gcccccgggg gtctggggag cagagaagtg cctcacaagc acaatgggaa | |
1441 ctgacctctc ctcctgacca caaagaaagg ctgggctctg ggccgggtcc tctctgcctt | |
1501 cggcatcatt tcccttacat ccaggcgaag aagtggcctc tcactcaaat tcctgttagc | |
1561 atttccatgg gtcacacata aactgcaatc ctctcaggag aagggggatc cctgatacat | |
1621 catatctatc cagactaagg atgtggttct tcctagattc tatggctcca ccaggtatag | |
1681 agagattcct ggggcctgca gttctccatc cctcttcaga agggagggat cccttggcga | |
1741 gagtttggct cagaggtggc atgaagcatg ctctgctctc tcttaccctt gaaggtcctt | |
1801 cggatgccca gagatgtctg ctggtcctgg gcaagccatc attcaaacgg gtccaacctg | |
1861 gccttctgtc tgccatggcc tgaccctcgc agtgtctctt ccagaggtgt ttagagtgga | |
1921 actcgcttca acctcttaac cagttgctga tccctgtgtt tctctccctt ctccttggag | |
1981 actactcttg gagggggatc ccaccatgtc cttggctttc cctgggtatt gttctcctct | |
2041 tcctcttcac aaatatgatt tcagtttgat ttgtggcctt tctggagtgt tccttggaga | |
2101 accaagatgt tccagctacc |
The 1.35 Kb PCR amplified fragment was cloned into NcoI and EcoRV sites of pGEM −5Zf(+) (Promega, Madison, Wis.) to create pGLO-1. The cloned PCR fragment was subcloned into NcoI and SacI sites of pRTL2 (Restrepo et al., 1990) to create pGLO-2 which places the GLOase insert under the control of CaMV 35S promoter with a dual enhancer, with the 5′ tobacco etch virus leader and a 3′ nopaline synthase terminator. The 35S::GLOase construct was subcloned into the Hind III site of the binary vector pBIN19 and electroporated into Agrobacterium tumefaciens LBA4404.
Plant Material and Growth Conditions
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US20040185562A1 (en) * | 2001-03-19 | 2004-09-23 | Schroeder William A | Myo-inositol oxygenases |
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US20040185562A1 (en) * | 2001-03-19 | 2004-09-23 | Schroeder William A | Myo-inositol oxygenases |
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Lorence et al. (Plant Physiology, 134:1200-1205, 2004). * |
Lorence et al. (Plant Physiology, 134:1200-1205, Mar. 1, 2004). * |
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